HEADER RNA BINDING PROTEIN 21-SEP-15 5DV7 TITLE CRYSTAL STRUCTURE OF NF90 TANDEM DSRBDS WITH DSRNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (5'- COMPND 3 R(*CP*CP*AP*GP*CP*AP*UP*UP*AP*UP*GP*AP*AP*AP*GP*UP*GP*A)-3'); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RNA (5'- COMPND 8 R(*UP*CP*AP*CP*UP*UP*UP*CP*AP*UP*AP*AP*UP*GP*CP*UP*GP*G)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: INTERLEUKIN ENHANCER-BINDING FACTOR 3; COMPND 13 CHAIN: C; COMPND 14 FRAGMENT: UNP RESIDUES 17-716; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 GENE: ILF3; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DOUBLE STRANDED RNA BINDING DOMAINS, DSRM, DSRBDS, DSRNA, NF90, ILF3, KEYWDS 2 DRBP76, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR U.JAYACHANDRAN,H.GREY,A.G.COOK REVDAT 4 10-JAN-24 5DV7 1 REMARK REVDAT 3 13-SEP-17 5DV7 1 REMARK REVDAT 2 09-MAR-16 5DV7 1 JRNL REVDAT 1 13-JAN-16 5DV7 0 JRNL AUTH U.JAYACHANDRAN,H.GREY,A.G.COOK JRNL TITL NUCLEAR FACTOR 90 USES AN ADAR2-LIKE BINDING MODE TO JRNL TITL 2 RECOGNIZE SPECIFIC BASES IN DSRNA. JRNL REF NUCLEIC ACIDS RES. V. 44 1924 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26712564 JRNL DOI 10.1093/NAR/GKV1508 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 7975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 368 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4165 - 5.0467 1.00 2591 115 0.2259 0.2633 REMARK 3 2 5.0467 - 4.0065 1.00 2505 127 0.2341 0.2674 REMARK 3 3 4.0065 - 3.5003 1.00 2511 126 0.3009 0.3175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 86.15 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.00830 REMARK 3 B22 (A**2) : 4.00830 REMARK 3 B33 (A**2) : -8.01660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1738 REMARK 3 ANGLE : 1.115 2534 REMARK 3 CHIRALITY : 0.066 324 REMARK 3 PLANARITY : 0.005 202 REMARK 3 DIHEDRAL : 13.418 698 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.17 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7981 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.91200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3P1X, 2DMY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM SODIUM CITRATE PH 5.0, 1.0M REMARK 280 AMMONIUM FORMATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.00233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.00467 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 72.00467 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.00233 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 4 REMARK 465 ARG C 5 REMARK 465 ILE C 6 REMARK 465 PHE C 7 REMARK 465 VAL C 8 REMARK 465 ASN C 9 REMARK 465 ASP C 10 REMARK 465 ASP C 11 REMARK 465 ARG C 12 REMARK 465 HIS C 13 REMARK 465 VAL C 14 REMARK 465 MET C 15 REMARK 465 ALA C 16 REMARK 465 LYS C 17 REMARK 465 HIS C 18 REMARK 465 SER C 19 REMARK 465 SER C 20 REMARK 465 VAL C 21 REMARK 465 TYR C 22 REMARK 465 PRO C 23 REMARK 465 THR C 24 REMARK 465 GLN C 25 REMARK 465 GLU C 26 REMARK 465 GLU C 27 REMARK 465 LEU C 28 REMARK 465 GLU C 29 REMARK 465 ALA C 30 REMARK 465 VAL C 31 REMARK 465 GLN C 32 REMARK 465 ASN C 33 REMARK 465 MET C 34 REMARK 465 VAL C 35 REMARK 465 SER C 36 REMARK 465 HIS C 37 REMARK 465 THR C 38 REMARK 465 GLU C 39 REMARK 465 ARG C 40 REMARK 465 ALA C 41 REMARK 465 LEU C 42 REMARK 465 LYS C 43 REMARK 465 ALA C 44 REMARK 465 VAL C 45 REMARK 465 SER C 46 REMARK 465 ASP C 47 REMARK 465 TRP C 48 REMARK 465 ILE C 49 REMARK 465 ASP C 50 REMARK 465 GLU C 51 REMARK 465 GLN C 52 REMARK 465 GLU C 53 REMARK 465 LYS C 54 REMARK 465 GLY C 55 REMARK 465 ASN C 56 REMARK 465 SER C 57 REMARK 465 GLU C 58 REMARK 465 LEU C 59 REMARK 465 SER C 60 REMARK 465 GLU C 61 REMARK 465 ALA C 62 REMARK 465 GLU C 63 REMARK 465 ASN C 64 REMARK 465 MET C 65 REMARK 465 ASP C 66 REMARK 465 THR C 67 REMARK 465 PRO C 68 REMARK 465 PRO C 69 REMARK 465 ASP C 70 REMARK 465 ASP C 71 REMARK 465 GLU C 72 REMARK 465 SER C 73 REMARK 465 LYS C 74 REMARK 465 GLU C 75 REMARK 465 GLY C 76 REMARK 465 ALA C 77 REMARK 465 GLY C 78 REMARK 465 GLU C 79 REMARK 465 GLN C 80 REMARK 465 LYS C 81 REMARK 465 ALA C 82 REMARK 465 GLU C 83 REMARK 465 HIS C 84 REMARK 465 MET C 85 REMARK 465 THR C 86 REMARK 465 ARG C 87 REMARK 465 THR C 88 REMARK 465 LEU C 89 REMARK 465 ARG C 90 REMARK 465 GLY C 91 REMARK 465 VAL C 92 REMARK 465 MET C 93 REMARK 465 ARG C 94 REMARK 465 VAL C 95 REMARK 465 GLY C 96 REMARK 465 LEU C 97 REMARK 465 VAL C 98 REMARK 465 ALA C 99 REMARK 465 LYS C 100 REMARK 465 GLY C 101 REMARK 465 LEU C 102 REMARK 465 LEU C 103 REMARK 465 LEU C 104 REMARK 465 LYS C 105 REMARK 465 GLY C 106 REMARK 465 ASP C 107 REMARK 465 LEU C 108 REMARK 465 ASP C 109 REMARK 465 LEU C 110 REMARK 465 GLU C 111 REMARK 465 LEU C 112 REMARK 465 VAL C 113 REMARK 465 LEU C 114 REMARK 465 LEU C 115 REMARK 465 CYS C 116 REMARK 465 LYS C 117 REMARK 465 GLU C 118 REMARK 465 LYS C 119 REMARK 465 PRO C 120 REMARK 465 THR C 121 REMARK 465 THR C 122 REMARK 465 ALA C 123 REMARK 465 LEU C 124 REMARK 465 LEU C 125 REMARK 465 ASP C 126 REMARK 465 LYS C 127 REMARK 465 VAL C 128 REMARK 465 ALA C 129 REMARK 465 ASP C 130 REMARK 465 ASN C 131 REMARK 465 LEU C 132 REMARK 465 ALA C 133 REMARK 465 ILE C 134 REMARK 465 GLN C 135 REMARK 465 LEU C 136 REMARK 465 THR C 137 REMARK 465 THR C 138 REMARK 465 VAL C 139 REMARK 465 THR C 140 REMARK 465 GLU C 141 REMARK 465 ASP C 142 REMARK 465 LYS C 143 REMARK 465 TYR C 144 REMARK 465 GLU C 145 REMARK 465 ILE C 146 REMARK 465 LEU C 147 REMARK 465 GLN C 148 REMARK 465 SER C 149 REMARK 465 VAL C 150 REMARK 465 ASP C 151 REMARK 465 ASP C 152 REMARK 465 ALA C 153 REMARK 465 ALA C 154 REMARK 465 ILE C 155 REMARK 465 VAL C 156 REMARK 465 ILE C 157 REMARK 465 LYS C 158 REMARK 465 ASN C 159 REMARK 465 THR C 160 REMARK 465 LYS C 161 REMARK 465 GLU C 162 REMARK 465 PRO C 163 REMARK 465 PRO C 164 REMARK 465 LEU C 165 REMARK 465 SER C 166 REMARK 465 LEU C 167 REMARK 465 THR C 168 REMARK 465 ILE C 169 REMARK 465 HIS C 170 REMARK 465 LEU C 171 REMARK 465 THR C 172 REMARK 465 SER C 173 REMARK 465 PRO C 174 REMARK 465 VAL C 175 REMARK 465 VAL C 176 REMARK 465 ARG C 177 REMARK 465 GLU C 178 REMARK 465 GLU C 179 REMARK 465 MET C 180 REMARK 465 GLU C 181 REMARK 465 LYS C 182 REMARK 465 VAL C 183 REMARK 465 LEU C 184 REMARK 465 ALA C 185 REMARK 465 GLY C 186 REMARK 465 GLU C 187 REMARK 465 THR C 188 REMARK 465 LEU C 189 REMARK 465 SER C 190 REMARK 465 VAL C 191 REMARK 465 ASN C 192 REMARK 465 ASP C 193 REMARK 465 PRO C 194 REMARK 465 PRO C 195 REMARK 465 ASP C 196 REMARK 465 VAL C 197 REMARK 465 LEU C 198 REMARK 465 ASP C 199 REMARK 465 ARG C 200 REMARK 465 GLN C 201 REMARK 465 LYS C 202 REMARK 465 CYS C 203 REMARK 465 LEU C 204 REMARK 465 ALA C 205 REMARK 465 ALA C 206 REMARK 465 LEU C 207 REMARK 465 ALA C 208 REMARK 465 SER C 209 REMARK 465 LEU C 210 REMARK 465 ARG C 211 REMARK 465 HIS C 212 REMARK 465 ALA C 213 REMARK 465 LYS C 214 REMARK 465 TRP C 215 REMARK 465 PHE C 216 REMARK 465 GLN C 217 REMARK 465 ALA C 218 REMARK 465 ARG C 219 REMARK 465 ALA C 220 REMARK 465 ASN C 221 REMARK 465 GLY C 222 REMARK 465 LEU C 223 REMARK 465 LYS C 224 REMARK 465 SER C 225 REMARK 465 CYS C 226 REMARK 465 VAL C 227 REMARK 465 ILE C 228 REMARK 465 VAL C 229 REMARK 465 ILE C 230 REMARK 465 ARG C 231 REMARK 465 VAL C 232 REMARK 465 LEU C 233 REMARK 465 ARG C 234 REMARK 465 ASP C 235 REMARK 465 LEU C 236 REMARK 465 CYS C 237 REMARK 465 THR C 238 REMARK 465 ARG C 239 REMARK 465 VAL C 240 REMARK 465 PRO C 241 REMARK 465 THR C 242 REMARK 465 TRP C 243 REMARK 465 GLY C 244 REMARK 465 PRO C 245 REMARK 465 LEU C 246 REMARK 465 ARG C 247 REMARK 465 GLY C 248 REMARK 465 TRP C 249 REMARK 465 PRO C 250 REMARK 465 LEU C 251 REMARK 465 GLU C 252 REMARK 465 LEU C 253 REMARK 465 LEU C 254 REMARK 465 CYS C 255 REMARK 465 GLU C 256 REMARK 465 LYS C 257 REMARK 465 SER C 258 REMARK 465 ILE C 259 REMARK 465 GLY C 260 REMARK 465 THR C 261 REMARK 465 ALA C 262 REMARK 465 ASN C 263 REMARK 465 ARG C 264 REMARK 465 PRO C 265 REMARK 465 MET C 266 REMARK 465 GLY C 267 REMARK 465 ALA C 268 REMARK 465 GLY C 269 REMARK 465 GLU C 270 REMARK 465 ALA C 271 REMARK 465 LEU C 272 REMARK 465 ARG C 273 REMARK 465 ARG C 274 REMARK 465 VAL C 275 REMARK 465 LEU C 276 REMARK 465 GLU C 277 REMARK 465 CYS C 278 REMARK 465 LEU C 279 REMARK 465 ALA C 280 REMARK 465 SER C 281 REMARK 465 GLY C 282 REMARK 465 ILE C 283 REMARK 465 VAL C 284 REMARK 465 MET C 285 REMARK 465 PRO C 286 REMARK 465 ASP C 287 REMARK 465 GLY C 288 REMARK 465 SER C 289 REMARK 465 GLY C 290 REMARK 465 ILE C 291 REMARK 465 TYR C 292 REMARK 465 ASP C 293 REMARK 465 PRO C 294 REMARK 465 CYS C 295 REMARK 465 GLU C 296 REMARK 465 LYS C 297 REMARK 465 GLU C 298 REMARK 465 ALA C 299 REMARK 465 THR C 300 REMARK 465 ASP C 301 REMARK 465 ALA C 302 REMARK 465 ILE C 303 REMARK 465 GLY C 304 REMARK 465 HIS C 305 REMARK 465 LEU C 306 REMARK 465 ASP C 307 REMARK 465 ARG C 308 REMARK 465 GLN C 309 REMARK 465 GLN C 310 REMARK 465 ARG C 311 REMARK 465 GLU C 312 REMARK 465 ASP C 313 REMARK 465 ILE C 314 REMARK 465 THR C 315 REMARK 465 GLN C 316 REMARK 465 SER C 317 REMARK 465 ALA C 318 REMARK 465 GLN C 319 REMARK 465 HIS C 320 REMARK 465 ALA C 321 REMARK 465 LEU C 322 REMARK 465 ARG C 323 REMARK 465 LEU C 324 REMARK 465 ALA C 325 REMARK 465 ALA C 326 REMARK 465 PHE C 327 REMARK 465 GLY C 328 REMARK 465 GLN C 329 REMARK 465 LEU C 330 REMARK 465 HIS C 331 REMARK 465 LYS C 332 REMARK 465 VAL C 333 REMARK 465 LEU C 334 REMARK 465 GLY C 335 REMARK 465 MET C 336 REMARK 465 ASP C 337 REMARK 465 PRO C 338 REMARK 465 LEU C 339 REMARK 465 PRO C 340 REMARK 465 SER C 341 REMARK 465 LYS C 342 REMARK 465 MET C 343 REMARK 465 PRO C 344 REMARK 465 LYS C 345 REMARK 465 LYS C 346 REMARK 465 PRO C 347 REMARK 465 LYS C 348 REMARK 465 ASN C 349 REMARK 465 GLU C 350 REMARK 465 ASN C 351 REMARK 465 PRO C 352 REMARK 465 VAL C 353 REMARK 465 ASP C 354 REMARK 465 TYR C 355 REMARK 465 THR C 356 REMARK 465 VAL C 357 REMARK 465 GLN C 358 REMARK 465 ILE C 359 REMARK 465 PRO C 360 REMARK 465 PRO C 361 REMARK 465 SER C 362 REMARK 465 THR C 363 REMARK 465 THR C 364 REMARK 465 TYR C 365 REMARK 465 ALA C 366 REMARK 465 ILE C 367 REMARK 465 THR C 368 REMARK 465 PRO C 369 REMARK 465 MET C 370 REMARK 465 LYS C 371 REMARK 465 ARG C 372 REMARK 465 PRO C 373 REMARK 465 MET C 374 REMARK 465 GLU C 375 REMARK 465 GLU C 376 REMARK 465 ASP C 377 REMARK 465 GLY C 378 REMARK 465 GLU C 379 REMARK 465 GLU C 380 REMARK 465 LYS C 381 REMARK 465 SER C 382 REMARK 465 PRO C 383 REMARK 465 SER C 384 REMARK 465 LYS C 385 REMARK 465 LYS C 386 REMARK 465 LYS C 387 REMARK 465 LYS C 388 REMARK 465 LYS C 389 REMARK 465 ILE C 390 REMARK 465 GLN C 391 REMARK 465 LYS C 392 REMARK 465 LYS C 393 REMARK 465 GLU C 394 REMARK 465 GLU C 395 REMARK 465 LYS C 396 REMARK 465 ALA C 397 REMARK 465 ASP C 398 REMARK 465 PRO C 399 REMARK 465 PRO C 400 REMARK 465 GLN C 401 REMARK 465 ALA C 402 REMARK 465 PRO C 468 REMARK 465 THR C 469 REMARK 465 GLY C 470 REMARK 465 ALA C 471 REMARK 465 GLU C 472 REMARK 465 GLY C 473 REMARK 465 ARG C 474 REMARK 465 ASP C 475 REMARK 465 SER C 476 REMARK 465 SER C 477 REMARK 465 LYS C 478 REMARK 465 GLY C 479 REMARK 465 GLU C 480 REMARK 465 ASP C 481 REMARK 465 SER C 482 REMARK 465 ALA C 483 REMARK 465 GLU C 484 REMARK 465 GLU C 485 REMARK 465 SER C 486 REMARK 465 ASP C 487 REMARK 465 GLY C 488 REMARK 465 LYS C 489 REMARK 465 PRO C 490 REMARK 465 ALA C 491 REMARK 465 ILE C 492 REMARK 465 VAL C 493 REMARK 465 ALA C 494 REMARK 465 PRO C 495 REMARK 465 PRO C 496 REMARK 465 PRO C 497 REMARK 465 VAL C 498 REMARK 465 VAL C 499 REMARK 465 GLU C 500 REMARK 465 ALA C 501 REMARK 465 VAL C 502 REMARK 465 SER C 503 REMARK 465 ASN C 504 REMARK 465 PRO C 505 REMARK 465 SER C 506 REMARK 465 SER C 507 REMARK 465 VAL C 508 REMARK 465 PHE C 509 REMARK 465 PRO C 510 REMARK 465 SER C 511 REMARK 465 ASP C 512 REMARK 465 ALA C 513 REMARK 465 THR C 514 REMARK 465 THR C 515 REMARK 465 GLU C 516 REMARK 465 GLN C 517 REMARK 465 GLY C 518 REMARK 465 ASP C 591 REMARK 465 THR C 592 REMARK 465 PRO C 593 REMARK 465 LEU C 594 REMARK 465 ALA C 595 REMARK 465 LEU C 596 REMARK 465 GLU C 597 REMARK 465 ALA C 598 REMARK 465 ASN C 599 REMARK 465 LYS C 600 REMARK 465 LYS C 601 REMARK 465 LYS C 602 REMARK 465 ARG C 603 REMARK 465 THR C 604 REMARK 465 PRO C 605 REMARK 465 VAL C 606 REMARK 465 PRO C 607 REMARK 465 VAL C 608 REMARK 465 ARG C 609 REMARK 465 GLY C 610 REMARK 465 GLY C 611 REMARK 465 PRO C 612 REMARK 465 LYS C 613 REMARK 465 PHE C 614 REMARK 465 ALA C 615 REMARK 465 ALA C 616 REMARK 465 LYS C 617 REMARK 465 PRO C 618 REMARK 465 HIS C 619 REMARK 465 ASN C 620 REMARK 465 PRO C 621 REMARK 465 GLY C 622 REMARK 465 PHE C 623 REMARK 465 GLY C 624 REMARK 465 MET C 625 REMARK 465 GLY C 626 REMARK 465 GLY C 627 REMARK 465 PRO C 628 REMARK 465 MET C 629 REMARK 465 HIS C 630 REMARK 465 ASN C 631 REMARK 465 GLU C 632 REMARK 465 VAL C 633 REMARK 465 PRO C 634 REMARK 465 PRO C 635 REMARK 465 PRO C 636 REMARK 465 PRO C 637 REMARK 465 ASN C 638 REMARK 465 ILE C 639 REMARK 465 ARG C 640 REMARK 465 GLY C 641 REMARK 465 ARG C 642 REMARK 465 GLY C 643 REMARK 465 ARG C 644 REMARK 465 GLY C 645 REMARK 465 GLY C 646 REMARK 465 ASN C 647 REMARK 465 ILE C 648 REMARK 465 ARG C 649 REMARK 465 GLY C 650 REMARK 465 ARG C 651 REMARK 465 GLY C 652 REMARK 465 ARG C 653 REMARK 465 GLY C 654 REMARK 465 ARG C 655 REMARK 465 GLY C 656 REMARK 465 PHE C 657 REMARK 465 GLY C 658 REMARK 465 GLY C 659 REMARK 465 ALA C 660 REMARK 465 ASN C 661 REMARK 465 HIS C 662 REMARK 465 GLY C 663 REMARK 465 GLY C 664 REMARK 465 GLY C 665 REMARK 465 TYR C 666 REMARK 465 MET C 667 REMARK 465 ASN C 668 REMARK 465 ALA C 669 REMARK 465 GLY C 670 REMARK 465 ALA C 671 REMARK 465 GLY C 672 REMARK 465 TYR C 673 REMARK 465 GLY C 674 REMARK 465 SER C 675 REMARK 465 TYR C 676 REMARK 465 GLY C 677 REMARK 465 TYR C 678 REMARK 465 SER C 679 REMARK 465 SER C 680 REMARK 465 ASN C 681 REMARK 465 SER C 682 REMARK 465 ALA C 683 REMARK 465 THR C 684 REMARK 465 ALA C 685 REMARK 465 GLY C 686 REMARK 465 TYR C 687 REMARK 465 SER C 688 REMARK 465 ASP C 689 REMARK 465 PHE C 690 REMARK 465 PHE C 691 REMARK 465 THR C 692 REMARK 465 ASP C 693 REMARK 465 CYS C 694 REMARK 465 TYR C 695 REMARK 465 GLY C 696 REMARK 465 TYR C 697 REMARK 465 HIS C 698 REMARK 465 ASP C 699 REMARK 465 PHE C 700 REMARK 465 GLY C 701 REMARK 465 ALA C 702 REMARK 465 SER C 703 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET C 403 CG SD CE REMARK 470 LEU C 406 CG CD1 CD2 REMARK 470 ARG C 408 CZ NH1 NH2 REMARK 470 LEU C 409 CG CD1 CD2 REMARK 470 LYS C 413 CG CD CE NZ REMARK 470 GLN C 417 CG CD OE1 NE2 REMARK 470 SER C 422 OG REMARK 470 GLU C 437 CG CD OE1 OE2 REMARK 470 SER C 441 OG REMARK 470 LYS C 451 CG CD CE NZ REMARK 470 LEU C 455 CG CD1 CD2 REMARK 470 LYS C 460 CG CD CE NZ REMARK 470 LEU C 462 CG CD1 CD2 REMARK 470 MET C 465 SD CE REMARK 470 LEU C 467 CG CD1 CD2 REMARK 470 PRO C 519 CG CD REMARK 470 LEU C 521 CG CD1 CD2 REMARK 470 LYS C 523 CG CD CE NZ REMARK 470 HIS C 524 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 526 CG CD CE NZ REMARK 470 VAL C 529 CG1 CG2 REMARK 470 GLU C 531 CG CD OE1 OE2 REMARK 470 LEU C 532 CG CD1 CD2 REMARK 470 GLU C 534 CG CD OE1 OE2 REMARK 470 LYS C 535 CG CD CE NZ REMARK 470 ARG C 536 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 537 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 539 CG CD1 CD2 REMARK 470 LYS C 540 CB CG CD CE NZ REMARK 470 GLU C 542 CG CD OE1 OE2 REMARK 470 LYS C 553 CG CD CE NZ REMARK 470 ARG C 554 CG CD NE CZ NH1 NH2 REMARK 470 VAL C 556 CG1 CG2 REMARK 470 GLU C 558 CG CD OE1 OE2 REMARK 470 GLU C 560 CG CD OE1 OE2 REMARK 470 GLN C 564 CG CD OE1 NE2 REMARK 470 LYS C 565 CG CD CE NZ REMARK 470 PHE C 566 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN C 567 CG CD OE1 NE2 REMARK 470 SER C 571 OG REMARK 470 LYS C 573 CG CD CE NZ REMARK 470 LYS C 574 CG CD CE NZ REMARK 470 LYS C 577 CG CD CE NZ REMARK 470 LEU C 582 CG CD1 CD2 REMARK 470 LEU C 585 CG CD1 CD2 REMARK 470 GLU C 586 CG CD OE1 OE2 REMARK 470 LYS C 587 CG CD CE NZ REMARK 470 LEU C 588 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2' G B 18 O GLY C 549 1.89 REMARK 500 N VAL C 561 O GLN C 564 2.06 REMARK 500 O VAL C 561 N GLY C 563 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER C 422 147.35 -173.29 REMARK 500 HIS C 524 7.25 -62.77 REMARK 500 SER C 550 -69.73 -145.23 REMARK 500 HIS C 551 -85.72 -114.32 REMARK 500 ASP C 562 -58.64 46.87 REMARK 500 REMARK 500 REMARK: NULL DBREF 5DV7 A 1 18 PDB 5DV7 5DV7 1 18 DBREF 5DV7 B 1 18 PDB 5DV7 5DV7 1 18 DBREF 5DV7 C 4 703 UNP Q9Z1X4 ILF3_MOUSE 17 716 SEQRES 1 A 18 C C A G C A U U A U G A A SEQRES 2 A 18 A G U G A SEQRES 1 B 18 U C A C U U U C A U A A U SEQRES 2 B 18 G C U G G SEQRES 1 C 700 MET ARG ILE PHE VAL ASN ASP ASP ARG HIS VAL MET ALA SEQRES 2 C 700 LYS HIS SER SER VAL TYR PRO THR GLN GLU GLU LEU GLU SEQRES 3 C 700 ALA VAL GLN ASN MET VAL SER HIS THR GLU ARG ALA LEU SEQRES 4 C 700 LYS ALA VAL SER ASP TRP ILE ASP GLU GLN GLU LYS GLY SEQRES 5 C 700 ASN SER GLU LEU SER GLU ALA GLU ASN MET ASP THR PRO SEQRES 6 C 700 PRO ASP ASP GLU SER LYS GLU GLY ALA GLY GLU GLN LYS SEQRES 7 C 700 ALA GLU HIS MET THR ARG THR LEU ARG GLY VAL MET ARG SEQRES 8 C 700 VAL GLY LEU VAL ALA LYS GLY LEU LEU LEU LYS GLY ASP SEQRES 9 C 700 LEU ASP LEU GLU LEU VAL LEU LEU CYS LYS GLU LYS PRO SEQRES 10 C 700 THR THR ALA LEU LEU ASP LYS VAL ALA ASP ASN LEU ALA SEQRES 11 C 700 ILE GLN LEU THR THR VAL THR GLU ASP LYS TYR GLU ILE SEQRES 12 C 700 LEU GLN SER VAL ASP ASP ALA ALA ILE VAL ILE LYS ASN SEQRES 13 C 700 THR LYS GLU PRO PRO LEU SER LEU THR ILE HIS LEU THR SEQRES 14 C 700 SER PRO VAL VAL ARG GLU GLU MET GLU LYS VAL LEU ALA SEQRES 15 C 700 GLY GLU THR LEU SER VAL ASN ASP PRO PRO ASP VAL LEU SEQRES 16 C 700 ASP ARG GLN LYS CYS LEU ALA ALA LEU ALA SER LEU ARG SEQRES 17 C 700 HIS ALA LYS TRP PHE GLN ALA ARG ALA ASN GLY LEU LYS SEQRES 18 C 700 SER CYS VAL ILE VAL ILE ARG VAL LEU ARG ASP LEU CYS SEQRES 19 C 700 THR ARG VAL PRO THR TRP GLY PRO LEU ARG GLY TRP PRO SEQRES 20 C 700 LEU GLU LEU LEU CYS GLU LYS SER ILE GLY THR ALA ASN SEQRES 21 C 700 ARG PRO MET GLY ALA GLY GLU ALA LEU ARG ARG VAL LEU SEQRES 22 C 700 GLU CYS LEU ALA SER GLY ILE VAL MET PRO ASP GLY SER SEQRES 23 C 700 GLY ILE TYR ASP PRO CYS GLU LYS GLU ALA THR ASP ALA SEQRES 24 C 700 ILE GLY HIS LEU ASP ARG GLN GLN ARG GLU ASP ILE THR SEQRES 25 C 700 GLN SER ALA GLN HIS ALA LEU ARG LEU ALA ALA PHE GLY SEQRES 26 C 700 GLN LEU HIS LYS VAL LEU GLY MET ASP PRO LEU PRO SER SEQRES 27 C 700 LYS MET PRO LYS LYS PRO LYS ASN GLU ASN PRO VAL ASP SEQRES 28 C 700 TYR THR VAL GLN ILE PRO PRO SER THR THR TYR ALA ILE SEQRES 29 C 700 THR PRO MET LYS ARG PRO MET GLU GLU ASP GLY GLU GLU SEQRES 30 C 700 LYS SER PRO SER LYS LYS LYS LYS LYS ILE GLN LYS LYS SEQRES 31 C 700 GLU GLU LYS ALA ASP PRO PRO GLN ALA MET ASN ALA LEU SEQRES 32 C 700 MET ARG LEU ASN GLN LEU LYS PRO GLY LEU GLN TYR LYS SEQRES 33 C 700 LEU ILE SER GLN THR GLY PRO VAL HIS ALA PRO ILE PHE SEQRES 34 C 700 THR MET SER VAL GLU VAL ASP GLY SER ASN PHE GLU ALA SEQRES 35 C 700 SER GLY PRO SER LYS LYS THR ALA LYS LEU HIS VAL ALA SEQRES 36 C 700 VAL LYS VAL LEU GLN ASP MET GLY LEU PRO THR GLY ALA SEQRES 37 C 700 GLU GLY ARG ASP SER SER LYS GLY GLU ASP SER ALA GLU SEQRES 38 C 700 GLU SER ASP GLY LYS PRO ALA ILE VAL ALA PRO PRO PRO SEQRES 39 C 700 VAL VAL GLU ALA VAL SER ASN PRO SER SER VAL PHE PRO SEQRES 40 C 700 SER ASP ALA THR THR GLU GLN GLY PRO ILE LEU THR LYS SEQRES 41 C 700 HIS GLY LYS ASN PRO VAL MET GLU LEU ASN GLU LYS ARG SEQRES 42 C 700 ARG GLY LEU LYS TYR GLU LEU ILE SER GLU THR GLY GLY SEQRES 43 C 700 SER HIS ASP LYS ARG PHE VAL MET GLU VAL GLU VAL ASP SEQRES 44 C 700 GLY GLN LYS PHE GLN GLY ALA GLY SER ASN LYS LYS VAL SEQRES 45 C 700 ALA LYS ALA TYR ALA ALA LEU ALA ALA LEU GLU LYS LEU SEQRES 46 C 700 PHE PRO ASP THR PRO LEU ALA LEU GLU ALA ASN LYS LYS SEQRES 47 C 700 LYS ARG THR PRO VAL PRO VAL ARG GLY GLY PRO LYS PHE SEQRES 48 C 700 ALA ALA LYS PRO HIS ASN PRO GLY PHE GLY MET GLY GLY SEQRES 49 C 700 PRO MET HIS ASN GLU VAL PRO PRO PRO PRO ASN ILE ARG SEQRES 50 C 700 GLY ARG GLY ARG GLY GLY ASN ILE ARG GLY ARG GLY ARG SEQRES 51 C 700 GLY ARG GLY PHE GLY GLY ALA ASN HIS GLY GLY GLY TYR SEQRES 52 C 700 MET ASN ALA GLY ALA GLY TYR GLY SER TYR GLY TYR SER SEQRES 53 C 700 SER ASN SER ALA THR ALA GLY TYR SER ASP PHE PHE THR SEQRES 54 C 700 ASP CYS TYR GLY TYR HIS ASP PHE GLY ALA SER FORMUL 4 HOH *(H2 O) HELIX 1 AA1 ASN C 404 LYS C 413 1 10 HELIX 2 AA2 SER C 449 GLY C 466 1 18 HELIX 3 AA3 ASN C 527 ARG C 536 1 10 HELIX 4 AA4 ASN C 572 PHE C 589 1 18 SHEET 1 AA1 3 LYS C 419 THR C 424 0 SHEET 2 AA1 3 ILE C 431 VAL C 438 -1 O ILE C 431 N THR C 424 SHEET 3 AA1 3 SER C 441 GLY C 447 -1 O SER C 441 N VAL C 438 SHEET 1 AA2 3 GLU C 542 THR C 547 0 SHEET 2 AA2 3 ARG C 554 VAL C 561 -1 O VAL C 556 N SER C 545 SHEET 3 AA2 3 GLN C 564 GLY C 570 -1 O GLN C 564 N VAL C 561 CRYST1 100.104 100.104 108.007 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009990 0.005768 0.000000 0.00000 SCALE2 0.000000 0.011535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009259 0.00000