data_5DZ8 # _entry.id 5DZ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DZ8 pdb_00005dz8 10.2210/pdb5dz8/pdb WWPDB D_1000208006 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-22 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2016-08-10 4 'Structure model' 1 3 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_entry_details 5 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DZ8 _pdbx_database_status.recvd_initial_deposition_date 2015-09-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rego, S.' 1 'Till, M.' 2 'Race, P.R.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 291 _citation.language ? _citation.page_first 15985 _citation.page_last 16000 _citation.title 'Structural and Functional Analysis of Cell Wall-anchored Polypeptide Adhesin BspA in Streptococcus agalactiae.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M116.726562 _citation.pdbx_database_id_PubMed 27311712 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rego, S.' 1 ? primary 'Heal, T.J.' 2 ? primary 'Pidwill, G.R.' 3 ? primary 'Till, M.' 4 ? primary 'Robson, A.' 5 ? primary 'Lamont, R.J.' 6 ? primary 'Sessions, R.B.' 7 ? primary 'Jenkinson, H.F.' 8 ? primary 'Race, P.R.' 9 ? primary 'Nobbs, A.H.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BspA (BspA_V)' 18852.699 2 ? ? 'Variable (V) domain, UNP residues 285-452' ? 2 non-polymer nat 'ACETATE ION' 59.044 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 64 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPNVAFDIKAQAKGVDNAEYGNSI(MSE)TAKTKPDGSFEFNHD(MSE)IDGVKTIGYGKLTGKVNHHYVANKDGSVTAF VDSVTLYKYEYRNVAQNAAVNQNIVFRVLTKDGRPIFEKAHNGNKTFAETLNKTLQLNLKYELKPHASSGNVEVFKIHDD WVHDTHGSALVSYVNNN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPNVAFDIKAQAKGVDNAEYGNSIMTAKTKPDGSFEFNHDMIDGVKTIGYGKLTGKVNHHYVANKDGSVTAFVDSVTLYK YEYRNVAQNAAVNQNIVFRVLTKDGRPIFEKAHNGNKTFAETLNKTLQLNLKYELKPHASSGNVEVFKIHDDWVHDTHGS ALVSYVNNN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'DI(HYDROXYETHYL)ETHER' PEG 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ASN n 1 4 VAL n 1 5 ALA n 1 6 PHE n 1 7 ASP n 1 8 ILE n 1 9 LYS n 1 10 ALA n 1 11 GLN n 1 12 ALA n 1 13 LYS n 1 14 GLY n 1 15 VAL n 1 16 ASP n 1 17 ASN n 1 18 ALA n 1 19 GLU n 1 20 TYR n 1 21 GLY n 1 22 ASN n 1 23 SER n 1 24 ILE n 1 25 MSE n 1 26 THR n 1 27 ALA n 1 28 LYS n 1 29 THR n 1 30 LYS n 1 31 PRO n 1 32 ASP n 1 33 GLY n 1 34 SER n 1 35 PHE n 1 36 GLU n 1 37 PHE n 1 38 ASN n 1 39 HIS n 1 40 ASP n 1 41 MSE n 1 42 ILE n 1 43 ASP n 1 44 GLY n 1 45 VAL n 1 46 LYS n 1 47 THR n 1 48 ILE n 1 49 GLY n 1 50 TYR n 1 51 GLY n 1 52 LYS n 1 53 LEU n 1 54 THR n 1 55 GLY n 1 56 LYS n 1 57 VAL n 1 58 ASN n 1 59 HIS n 1 60 HIS n 1 61 TYR n 1 62 VAL n 1 63 ALA n 1 64 ASN n 1 65 LYS n 1 66 ASP n 1 67 GLY n 1 68 SER n 1 69 VAL n 1 70 THR n 1 71 ALA n 1 72 PHE n 1 73 VAL n 1 74 ASP n 1 75 SER n 1 76 VAL n 1 77 THR n 1 78 LEU n 1 79 TYR n 1 80 LYS n 1 81 TYR n 1 82 GLU n 1 83 TYR n 1 84 ARG n 1 85 ASN n 1 86 VAL n 1 87 ALA n 1 88 GLN n 1 89 ASN n 1 90 ALA n 1 91 ALA n 1 92 VAL n 1 93 ASN n 1 94 GLN n 1 95 ASN n 1 96 ILE n 1 97 VAL n 1 98 PHE n 1 99 ARG n 1 100 VAL n 1 101 LEU n 1 102 THR n 1 103 LYS n 1 104 ASP n 1 105 GLY n 1 106 ARG n 1 107 PRO n 1 108 ILE n 1 109 PHE n 1 110 GLU n 1 111 LYS n 1 112 ALA n 1 113 HIS n 1 114 ASN n 1 115 GLY n 1 116 ASN n 1 117 LYS n 1 118 THR n 1 119 PHE n 1 120 ALA n 1 121 GLU n 1 122 THR n 1 123 LEU n 1 124 ASN n 1 125 LYS n 1 126 THR n 1 127 LEU n 1 128 GLN n 1 129 LEU n 1 130 ASN n 1 131 LEU n 1 132 LYS n 1 133 TYR n 1 134 GLU n 1 135 LEU n 1 136 LYS n 1 137 PRO n 1 138 HIS n 1 139 ALA n 1 140 SER n 1 141 SER n 1 142 GLY n 1 143 ASN n 1 144 VAL n 1 145 GLU n 1 146 VAL n 1 147 PHE n 1 148 LYS n 1 149 ILE n 1 150 HIS n 1 151 ASP n 1 152 ASP n 1 153 TRP n 1 154 VAL n 1 155 HIS n 1 156 ASP n 1 157 THR n 1 158 HIS n 1 159 GLY n 1 160 SER n 1 161 ALA n 1 162 LEU n 1 163 VAL n 1 164 SER n 1 165 TYR n 1 166 VAL n 1 167 ASN n 1 168 ASN n 1 169 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 169 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gbs1143 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NEM316 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae serotype III (strain NEM316)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211110 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pOPINF _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 PRO 2 0 0 PRO PRO A . n A 1 3 ASN 3 285 285 ASN ASN A . n A 1 4 VAL 4 286 286 VAL VAL A . n A 1 5 ALA 5 287 287 ALA ALA A . n A 1 6 PHE 6 288 288 PHE PHE A . n A 1 7 ASP 7 289 289 ASP ASP A . n A 1 8 ILE 8 290 290 ILE ILE A . n A 1 9 LYS 9 291 291 LYS LYS A . n A 1 10 ALA 10 292 292 ALA ALA A . n A 1 11 GLN 11 293 293 GLN GLN A . n A 1 12 ALA 12 294 294 ALA ALA A . n A 1 13 LYS 13 295 295 LYS LYS A . n A 1 14 GLY 14 296 296 GLY GLY A . n A 1 15 VAL 15 297 297 VAL VAL A . n A 1 16 ASP 16 298 ? ? ? A . n A 1 17 ASN 17 299 ? ? ? A . n A 1 18 ALA 18 300 300 ALA ALA A . n A 1 19 GLU 19 301 301 GLU GLU A . n A 1 20 TYR 20 302 302 TYR TYR A . n A 1 21 GLY 21 303 303 GLY GLY A . n A 1 22 ASN 22 304 304 ASN ASN A . n A 1 23 SER 23 305 305 SER SER A . n A 1 24 ILE 24 306 306 ILE ILE A . n A 1 25 MSE 25 307 307 MSE MSE A . n A 1 26 THR 26 308 308 THR THR A . n A 1 27 ALA 27 309 309 ALA ALA A . n A 1 28 LYS 28 310 310 LYS LYS A . n A 1 29 THR 29 311 311 THR THR A . n A 1 30 LYS 30 312 312 LYS LYS A . n A 1 31 PRO 31 313 313 PRO PRO A . n A 1 32 ASP 32 314 314 ASP ASP A . n A 1 33 GLY 33 315 315 GLY GLY A . n A 1 34 SER 34 316 316 SER SER A . n A 1 35 PHE 35 317 317 PHE PHE A . n A 1 36 GLU 36 318 318 GLU GLU A . n A 1 37 PHE 37 319 319 PHE PHE A . n A 1 38 ASN 38 320 320 ASN ASN A . n A 1 39 HIS 39 321 321 HIS HIS A . n A 1 40 ASP 40 322 322 ASP ASP A . n A 1 41 MSE 41 323 323 MSE MSE A . n A 1 42 ILE 42 324 324 ILE ILE A . n A 1 43 ASP 43 325 325 ASP ASP A . n A 1 44 GLY 44 326 326 GLY GLY A . n A 1 45 VAL 45 327 327 VAL VAL A . n A 1 46 LYS 46 328 328 LYS LYS A . n A 1 47 THR 47 329 329 THR THR A . n A 1 48 ILE 48 330 330 ILE ILE A . n A 1 49 GLY 49 331 331 GLY GLY A . n A 1 50 TYR 50 332 332 TYR TYR A . n A 1 51 GLY 51 333 333 GLY GLY A . n A 1 52 LYS 52 334 334 LYS LYS A . n A 1 53 LEU 53 335 335 LEU LEU A . n A 1 54 THR 54 336 336 THR THR A . n A 1 55 GLY 55 337 337 GLY GLY A . n A 1 56 LYS 56 338 338 LYS LYS A . n A 1 57 VAL 57 339 339 VAL VAL A . n A 1 58 ASN 58 340 340 ASN ASN A . n A 1 59 HIS 59 341 341 HIS HIS A . n A 1 60 HIS 60 342 342 HIS HIS A . n A 1 61 TYR 61 343 343 TYR TYR A . n A 1 62 VAL 62 344 344 VAL VAL A . n A 1 63 ALA 63 345 345 ALA ALA A . n A 1 64 ASN 64 346 346 ASN ASN A . n A 1 65 LYS 65 347 347 LYS LYS A . n A 1 66 ASP 66 348 348 ASP ASP A . n A 1 67 GLY 67 349 349 GLY GLY A . n A 1 68 SER 68 350 350 SER SER A . n A 1 69 VAL 69 351 351 VAL VAL A . n A 1 70 THR 70 352 352 THR THR A . n A 1 71 ALA 71 353 353 ALA ALA A . n A 1 72 PHE 72 354 354 PHE PHE A . n A 1 73 VAL 73 355 355 VAL VAL A . n A 1 74 ASP 74 356 356 ASP ASP A . n A 1 75 SER 75 357 357 SER SER A . n A 1 76 VAL 76 358 358 VAL VAL A . n A 1 77 THR 77 359 359 THR THR A . n A 1 78 LEU 78 360 360 LEU LEU A . n A 1 79 TYR 79 361 361 TYR TYR A . n A 1 80 LYS 80 362 362 LYS LYS A . n A 1 81 TYR 81 363 363 TYR TYR A . n A 1 82 GLU 82 364 364 GLU GLU A . n A 1 83 TYR 83 365 365 TYR TYR A . n A 1 84 ARG 84 366 366 ARG ARG A . n A 1 85 ASN 85 367 367 ASN ASN A . n A 1 86 VAL 86 368 368 VAL VAL A . n A 1 87 ALA 87 369 369 ALA ALA A . n A 1 88 GLN 88 370 370 GLN GLN A . n A 1 89 ASN 89 371 371 ASN ASN A . n A 1 90 ALA 90 372 372 ALA ALA A . n A 1 91 ALA 91 373 373 ALA ALA A . n A 1 92 VAL 92 374 374 VAL VAL A . n A 1 93 ASN 93 375 375 ASN ASN A . n A 1 94 GLN 94 376 376 GLN GLN A . n A 1 95 ASN 95 377 377 ASN ASN A . n A 1 96 ILE 96 378 378 ILE ILE A . n A 1 97 VAL 97 379 379 VAL VAL A . n A 1 98 PHE 98 380 380 PHE PHE A . n A 1 99 ARG 99 381 381 ARG ARG A . n A 1 100 VAL 100 382 382 VAL VAL A . n A 1 101 LEU 101 383 383 LEU LEU A . n A 1 102 THR 102 384 384 THR THR A . n A 1 103 LYS 103 385 385 LYS LYS A . n A 1 104 ASP 104 386 386 ASP ASP A . n A 1 105 GLY 105 387 387 GLY GLY A . n A 1 106 ARG 106 388 388 ARG ARG A . n A 1 107 PRO 107 389 389 PRO PRO A . n A 1 108 ILE 108 390 390 ILE ILE A . n A 1 109 PHE 109 391 391 PHE PHE A . n A 1 110 GLU 110 392 392 GLU GLU A . n A 1 111 LYS 111 393 393 LYS LYS A . n A 1 112 ALA 112 394 394 ALA ALA A . n A 1 113 HIS 113 395 395 HIS HIS A . n A 1 114 ASN 114 396 396 ASN ASN A . n A 1 115 GLY 115 397 397 GLY GLY A . n A 1 116 ASN 116 398 398 ASN ASN A . n A 1 117 LYS 117 399 399 LYS LYS A . n A 1 118 THR 118 400 400 THR THR A . n A 1 119 PHE 119 401 401 PHE PHE A . n A 1 120 ALA 120 402 402 ALA ALA A . n A 1 121 GLU 121 403 403 GLU GLU A . n A 1 122 THR 122 404 404 THR THR A . n A 1 123 LEU 123 405 405 LEU LEU A . n A 1 124 ASN 124 406 406 ASN ASN A . n A 1 125 LYS 125 407 407 LYS LYS A . n A 1 126 THR 126 408 408 THR THR A . n A 1 127 LEU 127 409 409 LEU LEU A . n A 1 128 GLN 128 410 410 GLN GLN A . n A 1 129 LEU 129 411 411 LEU LEU A . n A 1 130 ASN 130 412 412 ASN ASN A . n A 1 131 LEU 131 413 413 LEU LEU A . n A 1 132 LYS 132 414 414 LYS LYS A . n A 1 133 TYR 133 415 415 TYR TYR A . n A 1 134 GLU 134 416 416 GLU GLU A . n A 1 135 LEU 135 417 417 LEU LEU A . n A 1 136 LYS 136 418 418 LYS LYS A . n A 1 137 PRO 137 419 419 PRO PRO A . n A 1 138 HIS 138 420 420 HIS HIS A . n A 1 139 ALA 139 421 421 ALA ALA A . n A 1 140 SER 140 422 422 SER SER A . n A 1 141 SER 141 423 423 SER SER A . n A 1 142 GLY 142 424 424 GLY GLY A . n A 1 143 ASN 143 425 425 ASN ASN A . n A 1 144 VAL 144 426 426 VAL VAL A . n A 1 145 GLU 145 427 427 GLU GLU A . n A 1 146 VAL 146 428 428 VAL VAL A . n A 1 147 PHE 147 429 429 PHE PHE A . n A 1 148 LYS 148 430 430 LYS LYS A . n A 1 149 ILE 149 431 431 ILE ILE A . n A 1 150 HIS 150 432 432 HIS HIS A . n A 1 151 ASP 151 433 433 ASP ASP A . n A 1 152 ASP 152 434 434 ASP ASP A . n A 1 153 TRP 153 435 435 TRP TRP A . n A 1 154 VAL 154 436 436 VAL VAL A . n A 1 155 HIS 155 437 437 HIS HIS A . n A 1 156 ASP 156 438 438 ASP ASP A . n A 1 157 THR 157 439 439 THR THR A . n A 1 158 HIS 158 440 440 HIS HIS A . n A 1 159 GLY 159 441 441 GLY GLY A . n A 1 160 SER 160 442 442 SER SER A . n A 1 161 ALA 161 443 443 ALA ALA A . n A 1 162 LEU 162 444 444 LEU LEU A . n A 1 163 VAL 163 445 445 VAL VAL A . n A 1 164 SER 164 446 446 SER SER A . n A 1 165 TYR 165 447 447 TYR TYR A . n A 1 166 VAL 166 448 448 VAL VAL A . n A 1 167 ASN 167 449 449 ASN ASN A . n A 1 168 ASN 168 450 450 ASN ASN A . n A 1 169 ASN 169 451 451 ASN ASN A . n B 1 1 GLY 1 -1 -1 GLY GLY B . n B 1 2 PRO 2 0 0 PRO PRO B . n B 1 3 ASN 3 285 285 ASN ASN B . n B 1 4 VAL 4 286 286 VAL VAL B . n B 1 5 ALA 5 287 287 ALA ALA B . n B 1 6 PHE 6 288 288 PHE PHE B . n B 1 7 ASP 7 289 289 ASP ASP B . n B 1 8 ILE 8 290 290 ILE ILE B . n B 1 9 LYS 9 291 291 LYS LYS B . n B 1 10 ALA 10 292 292 ALA ALA B . n B 1 11 GLN 11 293 293 GLN GLN B . n B 1 12 ALA 12 294 294 ALA ALA B . n B 1 13 LYS 13 295 ? ? ? B . n B 1 14 GLY 14 296 ? ? ? B . n B 1 15 VAL 15 297 ? ? ? B . n B 1 16 ASP 16 298 ? ? ? B . n B 1 17 ASN 17 299 ? ? ? B . n B 1 18 ALA 18 300 ? ? ? B . n B 1 19 GLU 19 301 ? ? ? B . n B 1 20 TYR 20 302 ? ? ? B . n B 1 21 GLY 21 303 ? ? ? B . n B 1 22 ASN 22 304 ? ? ? B . n B 1 23 SER 23 305 305 SER SER B . n B 1 24 ILE 24 306 306 ILE ILE B . n B 1 25 MSE 25 307 307 MSE MSE B . n B 1 26 THR 26 308 308 THR THR B . n B 1 27 ALA 27 309 309 ALA ALA B . n B 1 28 LYS 28 310 310 LYS LYS B . n B 1 29 THR 29 311 311 THR THR B . n B 1 30 LYS 30 312 312 LYS LYS B . n B 1 31 PRO 31 313 313 PRO PRO B . n B 1 32 ASP 32 314 314 ASP ASP B . n B 1 33 GLY 33 315 315 GLY GLY B . n B 1 34 SER 34 316 316 SER SER B . n B 1 35 PHE 35 317 317 PHE PHE B . n B 1 36 GLU 36 318 318 GLU GLU B . n B 1 37 PHE 37 319 319 PHE PHE B . n B 1 38 ASN 38 320 320 ASN ASN B . n B 1 39 HIS 39 321 321 HIS HIS B . n B 1 40 ASP 40 322 322 ASP ASP B . n B 1 41 MSE 41 323 323 MSE MSE B . n B 1 42 ILE 42 324 324 ILE ILE B . n B 1 43 ASP 43 325 325 ASP ASP B . n B 1 44 GLY 44 326 326 GLY GLY B . n B 1 45 VAL 45 327 327 VAL VAL B . n B 1 46 LYS 46 328 328 LYS LYS B . n B 1 47 THR 47 329 329 THR THR B . n B 1 48 ILE 48 330 330 ILE ILE B . n B 1 49 GLY 49 331 331 GLY GLY B . n B 1 50 TYR 50 332 332 TYR TYR B . n B 1 51 GLY 51 333 333 GLY GLY B . n B 1 52 LYS 52 334 334 LYS LYS B . n B 1 53 LEU 53 335 335 LEU LEU B . n B 1 54 THR 54 336 336 THR THR B . n B 1 55 GLY 55 337 337 GLY GLY B . n B 1 56 LYS 56 338 338 LYS LYS B . n B 1 57 VAL 57 339 339 VAL VAL B . n B 1 58 ASN 58 340 340 ASN ASN B . n B 1 59 HIS 59 341 341 HIS HIS B . n B 1 60 HIS 60 342 342 HIS HIS B . n B 1 61 TYR 61 343 343 TYR TYR B . n B 1 62 VAL 62 344 344 VAL VAL B . n B 1 63 ALA 63 345 345 ALA ALA B . n B 1 64 ASN 64 346 346 ASN ASN B . n B 1 65 LYS 65 347 347 LYS LYS B . n B 1 66 ASP 66 348 348 ASP ASP B . n B 1 67 GLY 67 349 349 GLY GLY B . n B 1 68 SER 68 350 350 SER SER B . n B 1 69 VAL 69 351 351 VAL VAL B . n B 1 70 THR 70 352 352 THR THR B . n B 1 71 ALA 71 353 353 ALA ALA B . n B 1 72 PHE 72 354 354 PHE PHE B . n B 1 73 VAL 73 355 355 VAL VAL B . n B 1 74 ASP 74 356 356 ASP ASP B . n B 1 75 SER 75 357 357 SER SER B . n B 1 76 VAL 76 358 358 VAL VAL B . n B 1 77 THR 77 359 359 THR THR B . n B 1 78 LEU 78 360 360 LEU LEU B . n B 1 79 TYR 79 361 361 TYR TYR B . n B 1 80 LYS 80 362 362 LYS LYS B . n B 1 81 TYR 81 363 363 TYR TYR B . n B 1 82 GLU 82 364 364 GLU GLU B . n B 1 83 TYR 83 365 365 TYR TYR B . n B 1 84 ARG 84 366 366 ARG ARG B . n B 1 85 ASN 85 367 367 ASN ASN B . n B 1 86 VAL 86 368 368 VAL VAL B . n B 1 87 ALA 87 369 369 ALA ALA B . n B 1 88 GLN 88 370 370 GLN GLN B . n B 1 89 ASN 89 371 371 ASN ASN B . n B 1 90 ALA 90 372 ? ? ? B . n B 1 91 ALA 91 373 ? ? ? B . n B 1 92 VAL 92 374 ? ? ? B . n B 1 93 ASN 93 375 375 ASN ASN B . n B 1 94 GLN 94 376 376 GLN GLN B . n B 1 95 ASN 95 377 377 ASN ASN B . n B 1 96 ILE 96 378 378 ILE ILE B . n B 1 97 VAL 97 379 379 VAL VAL B . n B 1 98 PHE 98 380 380 PHE PHE B . n B 1 99 ARG 99 381 381 ARG ARG B . n B 1 100 VAL 100 382 382 VAL VAL B . n B 1 101 LEU 101 383 383 LEU LEU B . n B 1 102 THR 102 384 384 THR THR B . n B 1 103 LYS 103 385 385 LYS LYS B . n B 1 104 ASP 104 386 386 ASP ASP B . n B 1 105 GLY 105 387 387 GLY GLY B . n B 1 106 ARG 106 388 388 ARG ARG B . n B 1 107 PRO 107 389 389 PRO PRO B . n B 1 108 ILE 108 390 390 ILE ILE B . n B 1 109 PHE 109 391 391 PHE PHE B . n B 1 110 GLU 110 392 392 GLU GLU B . n B 1 111 LYS 111 393 393 LYS LYS B . n B 1 112 ALA 112 394 394 ALA ALA B . n B 1 113 HIS 113 395 395 HIS HIS B . n B 1 114 ASN 114 396 396 ASN ASN B . n B 1 115 GLY 115 397 397 GLY GLY B . n B 1 116 ASN 116 398 398 ASN ASN B . n B 1 117 LYS 117 399 399 LYS LYS B . n B 1 118 THR 118 400 400 THR THR B . n B 1 119 PHE 119 401 401 PHE PHE B . n B 1 120 ALA 120 402 402 ALA ALA B . n B 1 121 GLU 121 403 403 GLU GLU B . n B 1 122 THR 122 404 404 THR THR B . n B 1 123 LEU 123 405 405 LEU LEU B . n B 1 124 ASN 124 406 406 ASN ASN B . n B 1 125 LYS 125 407 407 LYS LYS B . n B 1 126 THR 126 408 408 THR THR B . n B 1 127 LEU 127 409 409 LEU LEU B . n B 1 128 GLN 128 410 410 GLN GLN B . n B 1 129 LEU 129 411 411 LEU LEU B . n B 1 130 ASN 130 412 412 ASN ASN B . n B 1 131 LEU 131 413 413 LEU LEU B . n B 1 132 LYS 132 414 414 LYS LYS B . n B 1 133 TYR 133 415 415 TYR TYR B . n B 1 134 GLU 134 416 416 GLU GLU B . n B 1 135 LEU 135 417 417 LEU LEU B . n B 1 136 LYS 136 418 418 LYS LYS B . n B 1 137 PRO 137 419 419 PRO PRO B . n B 1 138 HIS 138 420 420 HIS HIS B . n B 1 139 ALA 139 421 421 ALA ALA B . n B 1 140 SER 140 422 422 SER SER B . n B 1 141 SER 141 423 423 SER SER B . n B 1 142 GLY 142 424 424 GLY GLY B . n B 1 143 ASN 143 425 425 ASN ASN B . n B 1 144 VAL 144 426 426 VAL VAL B . n B 1 145 GLU 145 427 427 GLU GLU B . n B 1 146 VAL 146 428 428 VAL VAL B . n B 1 147 PHE 147 429 429 PHE PHE B . n B 1 148 LYS 148 430 430 LYS LYS B . n B 1 149 ILE 149 431 431 ILE ILE B . n B 1 150 HIS 150 432 432 HIS HIS B . n B 1 151 ASP 151 433 433 ASP ASP B . n B 1 152 ASP 152 434 434 ASP ASP B . n B 1 153 TRP 153 435 435 TRP TRP B . n B 1 154 VAL 154 436 436 VAL VAL B . n B 1 155 HIS 155 437 437 HIS HIS B . n B 1 156 ASP 156 438 438 ASP ASP B . n B 1 157 THR 157 439 439 THR THR B . n B 1 158 HIS 158 440 440 HIS HIS B . n B 1 159 GLY 159 441 441 GLY GLY B . n B 1 160 SER 160 442 442 SER SER B . n B 1 161 ALA 161 443 443 ALA ALA B . n B 1 162 LEU 162 444 444 LEU LEU B . n B 1 163 VAL 163 445 445 VAL VAL B . n B 1 164 SER 164 446 446 SER SER B . n B 1 165 TYR 165 447 447 TYR TYR B . n B 1 166 VAL 166 448 448 VAL VAL B . n B 1 167 ASN 167 449 449 ASN ASN B . n B 1 168 ASN 168 450 450 ASN ASN B . n B 1 169 ASN 169 451 451 ASN ASN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT 1 501 1 ACT ACT A . D 3 PEG 1 502 1 PEG PEG A . E 4 EDO 1 503 1 EDO EDO A . F 5 HOH 1 601 41 HOH HOH A . F 5 HOH 2 602 47 HOH HOH A . F 5 HOH 3 603 28 HOH HOH A . F 5 HOH 4 604 17 HOH HOH A . F 5 HOH 5 605 23 HOH HOH A . F 5 HOH 6 606 18 HOH HOH A . F 5 HOH 7 607 11 HOH HOH A . F 5 HOH 8 608 42 HOH HOH A . F 5 HOH 9 609 119 HOH HOH A . F 5 HOH 10 610 123 HOH HOH A . F 5 HOH 11 611 10 HOH HOH A . F 5 HOH 12 612 126 HOH HOH A . F 5 HOH 13 613 7 HOH HOH A . F 5 HOH 14 614 125 HOH HOH A . F 5 HOH 15 615 33 HOH HOH A . F 5 HOH 16 616 8 HOH HOH A . F 5 HOH 17 617 9 HOH HOH A . F 5 HOH 18 618 37 HOH HOH A . F 5 HOH 19 619 127 HOH HOH A . F 5 HOH 20 620 15 HOH HOH A . F 5 HOH 21 621 122 HOH HOH A . F 5 HOH 22 622 49 HOH HOH A . F 5 HOH 23 623 31 HOH HOH A . F 5 HOH 24 624 14 HOH HOH A . F 5 HOH 25 625 118 HOH HOH A . F 5 HOH 26 626 46 HOH HOH A . F 5 HOH 27 627 40 HOH HOH A . F 5 HOH 28 628 128 HOH HOH A . F 5 HOH 29 629 45 HOH HOH A . F 5 HOH 30 630 129 HOH HOH A . G 5 HOH 1 501 84 HOH HOH B . G 5 HOH 2 502 21 HOH HOH B . G 5 HOH 3 503 77 HOH HOH B . G 5 HOH 4 504 2 HOH HOH B . G 5 HOH 5 505 36 HOH HOH B . G 5 HOH 6 506 38 HOH HOH B . G 5 HOH 7 507 124 HOH HOH B . G 5 HOH 8 508 48 HOH HOH B . G 5 HOH 9 509 130 HOH HOH B . G 5 HOH 10 510 76 HOH HOH B . G 5 HOH 11 511 19 HOH HOH B . G 5 HOH 12 512 93 HOH HOH B . G 5 HOH 13 513 86 HOH HOH B . G 5 HOH 14 514 22 HOH HOH B . G 5 HOH 15 515 70 HOH HOH B . G 5 HOH 16 516 35 HOH HOH B . G 5 HOH 17 517 24 HOH HOH B . G 5 HOH 18 518 27 HOH HOH B . G 5 HOH 19 519 16 HOH HOH B . G 5 HOH 20 520 26 HOH HOH B . G 5 HOH 21 521 68 HOH HOH B . G 5 HOH 22 522 94 HOH HOH B . G 5 HOH 23 523 20 HOH HOH B . G 5 HOH 24 524 98 HOH HOH B . G 5 HOH 25 525 4 HOH HOH B . G 5 HOH 26 526 13 HOH HOH B . G 5 HOH 27 527 3 HOH HOH B . G 5 HOH 28 528 30 HOH HOH B . G 5 HOH 29 529 55 HOH HOH B . G 5 HOH 30 530 75 HOH HOH B . G 5 HOH 31 531 73 HOH HOH B . G 5 HOH 32 532 69 HOH HOH B . G 5 HOH 33 533 54 HOH HOH B . G 5 HOH 34 534 78 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 295 ? CG ? A LYS 13 CG 2 1 Y 1 A LYS 295 ? CD ? A LYS 13 CD 3 1 Y 1 A LYS 295 ? CE ? A LYS 13 CE 4 1 Y 1 A LYS 295 ? NZ ? A LYS 13 NZ 5 1 Y 1 A GLU 301 ? CG ? A GLU 19 CG 6 1 Y 1 A GLU 301 ? CD ? A GLU 19 CD 7 1 Y 1 A GLU 301 ? OE1 ? A GLU 19 OE1 8 1 Y 1 A GLU 301 ? OE2 ? A GLU 19 OE2 9 1 Y 1 A LYS 347 ? CG ? A LYS 65 CG 10 1 Y 1 A LYS 347 ? CD ? A LYS 65 CD 11 1 Y 1 A LYS 347 ? CE ? A LYS 65 CE 12 1 Y 1 A LYS 347 ? NZ ? A LYS 65 NZ 13 1 Y 1 A ARG 366 ? CG ? A ARG 84 CG 14 1 Y 1 A ARG 366 ? CD ? A ARG 84 CD 15 1 Y 1 A ARG 366 ? NE ? A ARG 84 NE 16 1 Y 1 A ARG 366 ? CZ ? A ARG 84 CZ 17 1 Y 1 A ARG 366 ? NH1 ? A ARG 84 NH1 18 1 Y 1 A ARG 366 ? NH2 ? A ARG 84 NH2 19 1 Y 1 A ALA 373 ? CB ? A ALA 91 CB 20 1 Y 1 B LYS 291 ? CG ? B LYS 9 CG 21 1 Y 1 B LYS 291 ? CD ? B LYS 9 CD 22 1 Y 1 B LYS 291 ? CE ? B LYS 9 CE 23 1 Y 1 B LYS 291 ? NZ ? B LYS 9 NZ 24 1 Y 1 B GLN 293 ? CG ? B GLN 11 CG 25 1 Y 1 B GLN 293 ? CD ? B GLN 11 CD 26 1 Y 1 B GLN 293 ? OE1 ? B GLN 11 OE1 27 1 Y 1 B GLN 293 ? NE2 ? B GLN 11 NE2 28 1 Y 1 B SER 305 ? OG ? B SER 23 OG 29 1 Y 1 B ILE 306 ? CG1 ? B ILE 24 CG1 30 1 Y 1 B ILE 306 ? CG2 ? B ILE 24 CG2 31 1 Y 1 B ILE 306 ? CD1 ? B ILE 24 CD1 32 1 Y 1 B ALA 309 ? CB ? B ALA 27 CB 33 1 Y 1 B LYS 312 ? CG ? B LYS 30 CG 34 1 Y 1 B LYS 312 ? CD ? B LYS 30 CD 35 1 Y 1 B LYS 312 ? CE ? B LYS 30 CE 36 1 Y 1 B LYS 312 ? NZ ? B LYS 30 NZ 37 1 Y 1 B ASP 325 ? CG ? B ASP 43 CG 38 1 Y 1 B ASP 325 ? OD1 ? B ASP 43 OD1 39 1 Y 1 B ASP 325 ? OD2 ? B ASP 43 OD2 40 1 Y 1 B LYS 328 ? CG ? B LYS 46 CG 41 1 Y 1 B LYS 328 ? CD ? B LYS 46 CD 42 1 Y 1 B LYS 328 ? CE ? B LYS 46 CE 43 1 Y 1 B LYS 328 ? NZ ? B LYS 46 NZ 44 1 Y 1 B ARG 366 ? CG ? B ARG 84 CG 45 1 Y 1 B ARG 366 ? CD ? B ARG 84 CD 46 1 Y 1 B ARG 366 ? NE ? B ARG 84 NE 47 1 Y 1 B ARG 366 ? CZ ? B ARG 84 CZ 48 1 Y 1 B ARG 366 ? NH1 ? B ARG 84 NH1 49 1 Y 1 B ARG 366 ? NH2 ? B ARG 84 NH2 50 1 Y 1 B GLN 370 ? CB ? B GLN 88 CB 51 1 Y 1 B GLN 370 ? CG ? B GLN 88 CG 52 1 Y 1 B GLN 370 ? CD ? B GLN 88 CD 53 1 Y 1 B GLN 370 ? OE1 ? B GLN 88 OE1 54 1 Y 1 B GLN 370 ? NE2 ? B GLN 88 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 # _cell.entry_id 5DZ8 _cell.length_a 148.140 _cell.length_b 34.420 _cell.length_c 92.600 _cell.angle_alpha 90.00 _cell.angle_beta 127.31 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DZ8 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DZ8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M Buffer System 1 at pH 6.5 (MES, imidazole), 0.1 M amino acids and 37.5% MPD_P1K_P3350 (Morpheus screen, Molecular Dimensions Ltd) ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-02-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97935 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DZ8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.41 _reflns.d_resolution_low 73.65 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14728 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.9 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.14 _reflns_shell.d_res_high 2.41 _reflns_shell.d_res_low 2.54 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all 2054 _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5DZ8 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13981 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 73.65 _refine.ls_d_res_high 2.41 _refine.ls_percent_reflns_obs 99.53 _refine.ls_R_factor_obs 0.17959 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17664 _refine.ls_R_factor_R_free 0.23229 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 746 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 47.402 _refine.aniso_B[1][1] -1.03 _refine.aniso_B[2][2] 1.79 _refine.aniso_B[3][3] -0.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.33 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.360 _refine.pdbx_overall_ESU_R_Free 0.244 _refine.overall_SU_ML 0.163 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.845 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2487 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 2566 _refine_hist.d_res_high 2.41 _refine_hist.d_res_low 73.65 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.019 ? 2551 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2358 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.779 1.923 ? 3448 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.993 3.000 ? 5393 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.489 5.000 ? 316 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.573 25.366 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.337 15.000 ? 384 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.545 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.103 0.200 ? 381 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 2950 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 618 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 4.129 4.612 ? 1286 'X-RAY DIFFRACTION' ? r_mcbond_other 4.114 4.609 ? 1284 'X-RAY DIFFRACTION' ? r_mcangle_it 6.154 6.876 ? 1594 'X-RAY DIFFRACTION' ? r_mcangle_other 6.158 6.877 ? 1595 'X-RAY DIFFRACTION' ? r_scbond_it 5.073 4.960 ? 1265 'X-RAY DIFFRACTION' ? r_scbond_other 5.065 4.960 ? 1265 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 7.558 7.256 ? 1855 'X-RAY DIFFRACTION' ? r_long_range_B_refined 9.944 36.038 ? 2590 'X-RAY DIFFRACTION' ? r_long_range_B_other 9.944 36.048 ? 2591 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.410 _refine_ls_shell.d_res_low 2.473 _refine_ls_shell.number_reflns_R_work 982 _refine_ls_shell.R_factor_R_work 0.205 _refine_ls_shell.percent_reflns_obs 93.96 _refine_ls_shell.R_factor_R_free 0.235 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5DZ8 _struct.title 'Streptococcus agalactiae AgI/II polypeptide BspA variable (V) domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DZ8 _struct_keywords.text 'Adhesin, cell adhesion' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8E589_STRA3 _struct_ref.pdbx_db_accession Q8E589 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NVAFDIKAQAKGVDNAEYGNSIMTAKTKPDGSFEFNHDMIDGVKTIGYGKLTGKVNHHYVANKDGSVTAFVDSVTLYKYE YRNVAQNAAVNQNIVFRVLTKDGRPIFEKAHNGNKTFAETLNKTLQLNLKYELKPHASSGNVEVFKIHDDWVHDTHGSAL VSYVNNN ; _struct_ref.pdbx_align_begin 285 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DZ8 A 3 ? 169 ? Q8E589 285 ? 451 ? 285 451 2 1 5DZ8 B 3 ? 169 ? Q8E589 285 ? 451 ? 285 451 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DZ8 GLY A 1 ? UNP Q8E589 ? ? 'expression tag' -1 1 1 5DZ8 PRO A 2 ? UNP Q8E589 ? ? 'expression tag' 0 2 2 5DZ8 GLY B 1 ? UNP Q8E589 ? ? 'expression tag' -1 3 2 5DZ8 PRO B 2 ? UNP Q8E589 ? ? 'expression tag' 0 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5710 ? 1 MORE -11 ? 1 'SSA (A^2)' 15940 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ILE 24 C ? ? ? 1_555 A MSE 25 N ? ? A ILE 306 A MSE 307 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 25 C ? ? ? 1_555 A THR 26 N ? ? A MSE 307 A THR 308 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale3 covale both ? A ASP 40 C ? ? ? 1_555 A MSE 41 N ? ? A ASP 322 A MSE 323 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 41 C ? ? ? 1_555 A ILE 42 N ? ? A MSE 323 A ILE 324 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale5 covale both ? B ILE 24 C ? ? ? 1_555 B MSE 25 N ? ? B ILE 306 B MSE 307 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale6 covale both ? B MSE 25 C ? ? ? 1_555 B THR 26 N ? ? B MSE 307 B THR 308 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? B ASP 40 C ? ? ? 1_555 B MSE 41 N ? ? B ASP 322 B MSE 323 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? B MSE 41 C ? ? ? 1_555 B ILE 42 N ? ? B MSE 323 B ILE 324 1_555 ? ? ? ? ? ? ? 1.341 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 25 ? . . . . MSE A 307 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 41 ? . . . . MSE A 323 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE B 25 ? . . . . MSE B 307 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE B 41 ? . . . . MSE B 323 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 43 A . ? ASP 325 A GLY 44 A ? GLY 326 A 1 -20.91 2 ALA 27 B . ? ALA 309 B LYS 28 B ? LYS 310 B 1 12.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 6 ? AA3 ? 5 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MSE A 25 ? THR A 26 ? MSE A 307 THR A 308 AA1 2 VAL A 4 ? ALA A 12 ? VAL A 286 ALA A 294 AA1 3 HIS B 158 ? ASN B 167 ? HIS B 440 ASN B 449 AA1 4 VAL A 144 ? HIS A 155 ? VAL A 426 HIS A 437 AA1 5 VAL B 144 ? HIS B 155 ? VAL B 426 HIS B 437 AA1 6 HIS A 158 ? ASN A 167 ? HIS A 440 ASN A 449 AA1 7 VAL B 4 ? GLN B 11 ? VAL B 286 GLN B 293 AA2 1 PRO A 107 ? HIS A 113 ? PRO A 389 HIS A 395 AA2 2 GLN A 94 ? LEU A 101 ? GLN A 376 LEU A 383 AA2 3 VAL A 144 ? HIS A 155 ? VAL A 426 HIS A 437 AA2 4 VAL B 144 ? HIS B 155 ? VAL B 426 HIS B 437 AA2 5 GLN B 94 ? THR B 102 ? GLN B 376 THR B 384 AA2 6 PRO B 107 ? HIS B 113 ? PRO B 389 HIS B 395 AA3 1 LYS A 28 ? THR A 29 ? LYS A 310 THR A 311 AA3 2 SER A 34 ? ILE A 42 ? SER A 316 ILE A 324 AA3 3 THR A 47 ? ALA A 63 ? THR A 329 ALA A 345 AA3 4 VAL A 69 ? ASN A 85 ? VAL A 351 ASN A 367 AA3 5 PHE A 119 ? LEU A 135 ? PHE A 401 LEU A 417 AA4 1 ILE B 24 ? MSE B 25 ? ILE B 306 MSE B 307 AA4 2 SER B 34 ? MSE B 41 ? SER B 316 MSE B 323 AA4 3 GLY B 49 ? ALA B 63 ? GLY B 331 ALA B 345 AA4 4 VAL B 69 ? ASN B 85 ? VAL B 351 ASN B 367 AA4 5 PHE B 119 ? LEU B 135 ? PHE B 401 LEU B 417 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O MSE A 25 ? O MSE A 307 N ALA A 10 ? N ALA A 292 AA1 2 3 N LYS A 9 ? N LYS A 291 O LEU B 162 ? O LEU B 444 AA1 3 4 O GLY B 159 ? O GLY B 441 N ILE A 149 ? N ILE A 431 AA1 4 5 N HIS A 155 ? N HIS A 437 O TRP B 153 ? O TRP B 435 AA1 5 6 O ILE B 149 ? O ILE B 431 N GLY A 159 ? N GLY A 441 AA1 6 7 N LEU A 162 ? N LEU A 444 O LYS B 9 ? O LYS B 291 AA2 1 2 O HIS A 113 ? O HIS A 395 N ILE A 96 ? N ILE A 378 AA2 2 3 N ASN A 95 ? N ASN A 377 O VAL A 154 ? O VAL A 436 AA2 3 4 N HIS A 155 ? N HIS A 437 O TRP B 153 ? O TRP B 435 AA2 4 5 O VAL B 154 ? O VAL B 436 N ASN B 95 ? N ASN B 377 AA2 5 6 N VAL B 100 ? N VAL B 382 O ILE B 108 ? O ILE B 390 AA3 1 2 N LYS A 28 ? N LYS A 310 O GLU A 36 ? O GLU A 318 AA3 2 3 N MSE A 41 ? N MSE A 323 O GLY A 49 ? O GLY A 331 AA3 3 4 N HIS A 60 ? N HIS A 342 O PHE A 72 ? O PHE A 354 AA3 4 5 N VAL A 69 ? N VAL A 351 O LEU A 135 ? O LEU A 417 AA4 1 2 N MSE B 25 ? N MSE B 307 O ASN B 38 ? O ASN B 320 AA4 2 3 N HIS B 39 ? N HIS B 321 O GLY B 51 ? O GLY B 333 AA4 3 4 N LYS B 56 ? N LYS B 338 O THR B 77 ? O THR B 359 AA4 4 5 N VAL B 69 ? N VAL B 351 O LEU B 135 ? O LEU B 417 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACT 501 ? 2 'binding site for residue ACT A 501' AC2 Software A PEG 502 ? 9 'binding site for residue PEG A 502' AC3 Software A EDO 503 ? 7 'binding site for residue EDO A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 LYS A 28 ? LYS A 310 . ? 1_555 ? 2 AC1 2 LYS A 30 ? LYS A 312 . ? 1_555 ? 3 AC2 9 VAL A 4 ? VAL A 286 . ? 1_555 ? 4 AC2 9 PHE A 6 ? PHE A 288 . ? 1_555 ? 5 AC2 9 THR A 29 ? THR A 311 . ? 1_555 ? 6 AC2 9 LYS A 30 ? LYS A 312 . ? 1_555 ? 7 AC2 9 PRO A 31 ? PRO A 313 . ? 1_555 ? 8 AC2 9 TYR A 61 ? TYR A 343 . ? 1_555 ? 9 AC2 9 LYS A 80 ? LYS A 362 . ? 4_556 ? 10 AC2 9 THR A 122 ? THR A 404 . ? 4_556 ? 11 AC2 9 EDO E . ? EDO A 503 . ? 1_555 ? 12 AC3 7 ALA A 5 ? ALA A 287 . ? 1_555 ? 13 AC3 7 PHE A 6 ? PHE A 288 . ? 1_555 ? 14 AC3 7 ASP A 7 ? ASP A 289 . ? 1_555 ? 15 AC3 7 LYS A 80 ? LYS A 362 . ? 4_556 ? 16 AC3 7 GLU A 82 ? GLU A 364 . ? 4_556 ? 17 AC3 7 ALA A 120 ? ALA A 402 . ? 4_556 ? 18 AC3 7 PEG D . ? PEG A 502 . ? 1_555 ? # _pdbx_entry_details.entry_id 5DZ8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 352 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 416 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 0 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 ASN _pdbx_validate_rmsd_bond.auth_seq_id_2 285 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.537 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.201 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 388 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 388 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 388 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.33 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.03 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 295 ? ? -54.66 93.71 2 1 ASP A 348 ? ? -68.42 0.22 3 1 TYR A 361 ? ? -94.75 -69.36 4 1 LEU A 411 ? ? -124.01 -51.47 5 1 ASP B 325 ? ? 70.02 -88.84 6 1 GLN B 370 ? ? -67.72 -148.85 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 MSE _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 307 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 THR _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 308 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -145.11 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id PRO _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 0 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -12.39 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 B _pdbx_validate_polymer_linkage.auth_comp_id_1 PRO _pdbx_validate_polymer_linkage.auth_seq_id_1 0 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 B _pdbx_validate_polymer_linkage.auth_comp_id_2 ASN _pdbx_validate_polymer_linkage.auth_seq_id_2 285 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.80 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 307 ? MET 'modified residue' 2 A MSE 41 A MSE 323 ? MET 'modified residue' 3 B MSE 25 B MSE 307 ? MET 'modified residue' 4 B MSE 41 B MSE 323 ? MET 'modified residue' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 298 ? A ASP 16 2 1 Y 1 A ASN 299 ? A ASN 17 3 1 Y 1 B LYS 295 ? B LYS 13 4 1 Y 1 B GLY 296 ? B GLY 14 5 1 Y 1 B VAL 297 ? B VAL 15 6 1 Y 1 B ASP 298 ? B ASP 16 7 1 Y 1 B ASN 299 ? B ASN 17 8 1 Y 1 B ALA 300 ? B ALA 18 9 1 Y 1 B GLU 301 ? B GLU 19 10 1 Y 1 B TYR 302 ? B TYR 20 11 1 Y 1 B GLY 303 ? B GLY 21 12 1 Y 1 B ASN 304 ? B ASN 22 13 1 Y 1 B ALA 372 ? B ALA 90 14 1 Y 1 B ALA 373 ? B ALA 91 15 1 Y 1 B VAL 374 ? B VAL 92 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 EDO C1 C N N 81 EDO O1 O N N 82 EDO C2 C N N 83 EDO O2 O N N 84 EDO H11 H N N 85 EDO H12 H N N 86 EDO HO1 H N N 87 EDO H21 H N N 88 EDO H22 H N N 89 EDO HO2 H N N 90 GLN N N N N 91 GLN CA C N S 92 GLN C C N N 93 GLN O O N N 94 GLN CB C N N 95 GLN CG C N N 96 GLN CD C N N 97 GLN OE1 O N N 98 GLN NE2 N N N 99 GLN OXT O N N 100 GLN H H N N 101 GLN H2 H N N 102 GLN HA H N N 103 GLN HB2 H N N 104 GLN HB3 H N N 105 GLN HG2 H N N 106 GLN HG3 H N N 107 GLN HE21 H N N 108 GLN HE22 H N N 109 GLN HXT H N N 110 GLU N N N N 111 GLU CA C N S 112 GLU C C N N 113 GLU O O N N 114 GLU CB C N N 115 GLU CG C N N 116 GLU CD C N N 117 GLU OE1 O N N 118 GLU OE2 O N N 119 GLU OXT O N N 120 GLU H H N N 121 GLU H2 H N N 122 GLU HA H N N 123 GLU HB2 H N N 124 GLU HB3 H N N 125 GLU HG2 H N N 126 GLU HG3 H N N 127 GLU HE2 H N N 128 GLU HXT H N N 129 GLY N N N N 130 GLY CA C N N 131 GLY C C N N 132 GLY O O N N 133 GLY OXT O N N 134 GLY H H N N 135 GLY H2 H N N 136 GLY HA2 H N N 137 GLY HA3 H N N 138 GLY HXT H N N 139 HIS N N N N 140 HIS CA C N S 141 HIS C C N N 142 HIS O O N N 143 HIS CB C N N 144 HIS CG C Y N 145 HIS ND1 N Y N 146 HIS CD2 C Y N 147 HIS CE1 C Y N 148 HIS NE2 N Y N 149 HIS OXT O N N 150 HIS H H N N 151 HIS H2 H N N 152 HIS HA H N N 153 HIS HB2 H N N 154 HIS HB3 H N N 155 HIS HD1 H N N 156 HIS HD2 H N N 157 HIS HE1 H N N 158 HIS HE2 H N N 159 HIS HXT H N N 160 HOH O O N N 161 HOH H1 H N N 162 HOH H2 H N N 163 ILE N N N N 164 ILE CA C N S 165 ILE C C N N 166 ILE O O N N 167 ILE CB C N S 168 ILE CG1 C N N 169 ILE CG2 C N N 170 ILE CD1 C N N 171 ILE OXT O N N 172 ILE H H N N 173 ILE H2 H N N 174 ILE HA H N N 175 ILE HB H N N 176 ILE HG12 H N N 177 ILE HG13 H N N 178 ILE HG21 H N N 179 ILE HG22 H N N 180 ILE HG23 H N N 181 ILE HD11 H N N 182 ILE HD12 H N N 183 ILE HD13 H N N 184 ILE HXT H N N 185 LEU N N N N 186 LEU CA C N S 187 LEU C C N N 188 LEU O O N N 189 LEU CB C N N 190 LEU CG C N N 191 LEU CD1 C N N 192 LEU CD2 C N N 193 LEU OXT O N N 194 LEU H H N N 195 LEU H2 H N N 196 LEU HA H N N 197 LEU HB2 H N N 198 LEU HB3 H N N 199 LEU HG H N N 200 LEU HD11 H N N 201 LEU HD12 H N N 202 LEU HD13 H N N 203 LEU HD21 H N N 204 LEU HD22 H N N 205 LEU HD23 H N N 206 LEU HXT H N N 207 LYS N N N N 208 LYS CA C N S 209 LYS C C N N 210 LYS O O N N 211 LYS CB C N N 212 LYS CG C N N 213 LYS CD C N N 214 LYS CE C N N 215 LYS NZ N N N 216 LYS OXT O N N 217 LYS H H N N 218 LYS H2 H N N 219 LYS HA H N N 220 LYS HB2 H N N 221 LYS HB3 H N N 222 LYS HG2 H N N 223 LYS HG3 H N N 224 LYS HD2 H N N 225 LYS HD3 H N N 226 LYS HE2 H N N 227 LYS HE3 H N N 228 LYS HZ1 H N N 229 LYS HZ2 H N N 230 LYS HZ3 H N N 231 LYS HXT H N N 232 MSE N N N N 233 MSE CA C N S 234 MSE C C N N 235 MSE O O N N 236 MSE OXT O N N 237 MSE CB C N N 238 MSE CG C N N 239 MSE SE SE N N 240 MSE CE C N N 241 MSE H H N N 242 MSE H2 H N N 243 MSE HA H N N 244 MSE HXT H N N 245 MSE HB2 H N N 246 MSE HB3 H N N 247 MSE HG2 H N N 248 MSE HG3 H N N 249 MSE HE1 H N N 250 MSE HE2 H N N 251 MSE HE3 H N N 252 PEG C1 C N N 253 PEG O1 O N N 254 PEG C2 C N N 255 PEG O2 O N N 256 PEG C3 C N N 257 PEG C4 C N N 258 PEG O4 O N N 259 PEG H11 H N N 260 PEG H12 H N N 261 PEG HO1 H N N 262 PEG H21 H N N 263 PEG H22 H N N 264 PEG H31 H N N 265 PEG H32 H N N 266 PEG H41 H N N 267 PEG H42 H N N 268 PEG HO4 H N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TRP N N N N 341 TRP CA C N S 342 TRP C C N N 343 TRP O O N N 344 TRP CB C N N 345 TRP CG C Y N 346 TRP CD1 C Y N 347 TRP CD2 C Y N 348 TRP NE1 N Y N 349 TRP CE2 C Y N 350 TRP CE3 C Y N 351 TRP CZ2 C Y N 352 TRP CZ3 C Y N 353 TRP CH2 C Y N 354 TRP OXT O N N 355 TRP H H N N 356 TRP H2 H N N 357 TRP HA H N N 358 TRP HB2 H N N 359 TRP HB3 H N N 360 TRP HD1 H N N 361 TRP HE1 H N N 362 TRP HE3 H N N 363 TRP HZ2 H N N 364 TRP HZ3 H N N 365 TRP HH2 H N N 366 TRP HXT H N N 367 TYR N N N N 368 TYR CA C N S 369 TYR C C N N 370 TYR O O N N 371 TYR CB C N N 372 TYR CG C Y N 373 TYR CD1 C Y N 374 TYR CD2 C Y N 375 TYR CE1 C Y N 376 TYR CE2 C Y N 377 TYR CZ C Y N 378 TYR OH O N N 379 TYR OXT O N N 380 TYR H H N N 381 TYR H2 H N N 382 TYR HA H N N 383 TYR HB2 H N N 384 TYR HB3 H N N 385 TYR HD1 H N N 386 TYR HD2 H N N 387 TYR HE1 H N N 388 TYR HE2 H N N 389 TYR HH H N N 390 TYR HXT H N N 391 VAL N N N N 392 VAL CA C N S 393 VAL C C N N 394 VAL O O N N 395 VAL CB C N N 396 VAL CG1 C N N 397 VAL CG2 C N N 398 VAL OXT O N N 399 VAL H H N N 400 VAL H2 H N N 401 VAL HA H N N 402 VAL HB H N N 403 VAL HG11 H N N 404 VAL HG12 H N N 405 VAL HG13 H N N 406 VAL HG21 H N N 407 VAL HG22 H N N 408 VAL HG23 H N N 409 VAL HXT H N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 EDO C1 O1 sing N N 76 EDO C1 C2 sing N N 77 EDO C1 H11 sing N N 78 EDO C1 H12 sing N N 79 EDO O1 HO1 sing N N 80 EDO C2 O2 sing N N 81 EDO C2 H21 sing N N 82 EDO C2 H22 sing N N 83 EDO O2 HO2 sing N N 84 GLN N CA sing N N 85 GLN N H sing N N 86 GLN N H2 sing N N 87 GLN CA C sing N N 88 GLN CA CB sing N N 89 GLN CA HA sing N N 90 GLN C O doub N N 91 GLN C OXT sing N N 92 GLN CB CG sing N N 93 GLN CB HB2 sing N N 94 GLN CB HB3 sing N N 95 GLN CG CD sing N N 96 GLN CG HG2 sing N N 97 GLN CG HG3 sing N N 98 GLN CD OE1 doub N N 99 GLN CD NE2 sing N N 100 GLN NE2 HE21 sing N N 101 GLN NE2 HE22 sing N N 102 GLN OXT HXT sing N N 103 GLU N CA sing N N 104 GLU N H sing N N 105 GLU N H2 sing N N 106 GLU CA C sing N N 107 GLU CA CB sing N N 108 GLU CA HA sing N N 109 GLU C O doub N N 110 GLU C OXT sing N N 111 GLU CB CG sing N N 112 GLU CB HB2 sing N N 113 GLU CB HB3 sing N N 114 GLU CG CD sing N N 115 GLU CG HG2 sing N N 116 GLU CG HG3 sing N N 117 GLU CD OE1 doub N N 118 GLU CD OE2 sing N N 119 GLU OE2 HE2 sing N N 120 GLU OXT HXT sing N N 121 GLY N CA sing N N 122 GLY N H sing N N 123 GLY N H2 sing N N 124 GLY CA C sing N N 125 GLY CA HA2 sing N N 126 GLY CA HA3 sing N N 127 GLY C O doub N N 128 GLY C OXT sing N N 129 GLY OXT HXT sing N N 130 HIS N CA sing N N 131 HIS N H sing N N 132 HIS N H2 sing N N 133 HIS CA C sing N N 134 HIS CA CB sing N N 135 HIS CA HA sing N N 136 HIS C O doub N N 137 HIS C OXT sing N N 138 HIS CB CG sing N N 139 HIS CB HB2 sing N N 140 HIS CB HB3 sing N N 141 HIS CG ND1 sing Y N 142 HIS CG CD2 doub Y N 143 HIS ND1 CE1 doub Y N 144 HIS ND1 HD1 sing N N 145 HIS CD2 NE2 sing Y N 146 HIS CD2 HD2 sing N N 147 HIS CE1 NE2 sing Y N 148 HIS CE1 HE1 sing N N 149 HIS NE2 HE2 sing N N 150 HIS OXT HXT sing N N 151 HOH O H1 sing N N 152 HOH O H2 sing N N 153 ILE N CA sing N N 154 ILE N H sing N N 155 ILE N H2 sing N N 156 ILE CA C sing N N 157 ILE CA CB sing N N 158 ILE CA HA sing N N 159 ILE C O doub N N 160 ILE C OXT sing N N 161 ILE CB CG1 sing N N 162 ILE CB CG2 sing N N 163 ILE CB HB sing N N 164 ILE CG1 CD1 sing N N 165 ILE CG1 HG12 sing N N 166 ILE CG1 HG13 sing N N 167 ILE CG2 HG21 sing N N 168 ILE CG2 HG22 sing N N 169 ILE CG2 HG23 sing N N 170 ILE CD1 HD11 sing N N 171 ILE CD1 HD12 sing N N 172 ILE CD1 HD13 sing N N 173 ILE OXT HXT sing N N 174 LEU N CA sing N N 175 LEU N H sing N N 176 LEU N H2 sing N N 177 LEU CA C sing N N 178 LEU CA CB sing N N 179 LEU CA HA sing N N 180 LEU C O doub N N 181 LEU C OXT sing N N 182 LEU CB CG sing N N 183 LEU CB HB2 sing N N 184 LEU CB HB3 sing N N 185 LEU CG CD1 sing N N 186 LEU CG CD2 sing N N 187 LEU CG HG sing N N 188 LEU CD1 HD11 sing N N 189 LEU CD1 HD12 sing N N 190 LEU CD1 HD13 sing N N 191 LEU CD2 HD21 sing N N 192 LEU CD2 HD22 sing N N 193 LEU CD2 HD23 sing N N 194 LEU OXT HXT sing N N 195 LYS N CA sing N N 196 LYS N H sing N N 197 LYS N H2 sing N N 198 LYS CA C sing N N 199 LYS CA CB sing N N 200 LYS CA HA sing N N 201 LYS C O doub N N 202 LYS C OXT sing N N 203 LYS CB CG sing N N 204 LYS CB HB2 sing N N 205 LYS CB HB3 sing N N 206 LYS CG CD sing N N 207 LYS CG HG2 sing N N 208 LYS CG HG3 sing N N 209 LYS CD CE sing N N 210 LYS CD HD2 sing N N 211 LYS CD HD3 sing N N 212 LYS CE NZ sing N N 213 LYS CE HE2 sing N N 214 LYS CE HE3 sing N N 215 LYS NZ HZ1 sing N N 216 LYS NZ HZ2 sing N N 217 LYS NZ HZ3 sing N N 218 LYS OXT HXT sing N N 219 MSE N CA sing N N 220 MSE N H sing N N 221 MSE N H2 sing N N 222 MSE CA C sing N N 223 MSE CA CB sing N N 224 MSE CA HA sing N N 225 MSE C O doub N N 226 MSE C OXT sing N N 227 MSE OXT HXT sing N N 228 MSE CB CG sing N N 229 MSE CB HB2 sing N N 230 MSE CB HB3 sing N N 231 MSE CG SE sing N N 232 MSE CG HG2 sing N N 233 MSE CG HG3 sing N N 234 MSE SE CE sing N N 235 MSE CE HE1 sing N N 236 MSE CE HE2 sing N N 237 MSE CE HE3 sing N N 238 PEG C1 O1 sing N N 239 PEG C1 C2 sing N N 240 PEG C1 H11 sing N N 241 PEG C1 H12 sing N N 242 PEG O1 HO1 sing N N 243 PEG C2 O2 sing N N 244 PEG C2 H21 sing N N 245 PEG C2 H22 sing N N 246 PEG O2 C3 sing N N 247 PEG C3 C4 sing N N 248 PEG C3 H31 sing N N 249 PEG C3 H32 sing N N 250 PEG C4 O4 sing N N 251 PEG C4 H41 sing N N 252 PEG C4 H42 sing N N 253 PEG O4 HO4 sing N N 254 PHE N CA sing N N 255 PHE N H sing N N 256 PHE N H2 sing N N 257 PHE CA C sing N N 258 PHE CA CB sing N N 259 PHE CA HA sing N N 260 PHE C O doub N N 261 PHE C OXT sing N N 262 PHE CB CG sing N N 263 PHE CB HB2 sing N N 264 PHE CB HB3 sing N N 265 PHE CG CD1 doub Y N 266 PHE CG CD2 sing Y N 267 PHE CD1 CE1 sing Y N 268 PHE CD1 HD1 sing N N 269 PHE CD2 CE2 doub Y N 270 PHE CD2 HD2 sing N N 271 PHE CE1 CZ doub Y N 272 PHE CE1 HE1 sing N N 273 PHE CE2 CZ sing Y N 274 PHE CE2 HE2 sing N N 275 PHE CZ HZ sing N N 276 PHE OXT HXT sing N N 277 PRO N CA sing N N 278 PRO N CD sing N N 279 PRO N H sing N N 280 PRO CA C sing N N 281 PRO CA CB sing N N 282 PRO CA HA sing N N 283 PRO C O doub N N 284 PRO C OXT sing N N 285 PRO CB CG sing N N 286 PRO CB HB2 sing N N 287 PRO CB HB3 sing N N 288 PRO CG CD sing N N 289 PRO CG HG2 sing N N 290 PRO CG HG3 sing N N 291 PRO CD HD2 sing N N 292 PRO CD HD3 sing N N 293 PRO OXT HXT sing N N 294 SER N CA sing N N 295 SER N H sing N N 296 SER N H2 sing N N 297 SER CA C sing N N 298 SER CA CB sing N N 299 SER CA HA sing N N 300 SER C O doub N N 301 SER C OXT sing N N 302 SER CB OG sing N N 303 SER CB HB2 sing N N 304 SER CB HB3 sing N N 305 SER OG HG sing N N 306 SER OXT HXT sing N N 307 THR N CA sing N N 308 THR N H sing N N 309 THR N H2 sing N N 310 THR CA C sing N N 311 THR CA CB sing N N 312 THR CA HA sing N N 313 THR C O doub N N 314 THR C OXT sing N N 315 THR CB OG1 sing N N 316 THR CB CG2 sing N N 317 THR CB HB sing N N 318 THR OG1 HG1 sing N N 319 THR CG2 HG21 sing N N 320 THR CG2 HG22 sing N N 321 THR CG2 HG23 sing N N 322 THR OXT HXT sing N N 323 TRP N CA sing N N 324 TRP N H sing N N 325 TRP N H2 sing N N 326 TRP CA C sing N N 327 TRP CA CB sing N N 328 TRP CA HA sing N N 329 TRP C O doub N N 330 TRP C OXT sing N N 331 TRP CB CG sing N N 332 TRP CB HB2 sing N N 333 TRP CB HB3 sing N N 334 TRP CG CD1 doub Y N 335 TRP CG CD2 sing Y N 336 TRP CD1 NE1 sing Y N 337 TRP CD1 HD1 sing N N 338 TRP CD2 CE2 doub Y N 339 TRP CD2 CE3 sing Y N 340 TRP NE1 CE2 sing Y N 341 TRP NE1 HE1 sing N N 342 TRP CE2 CZ2 sing Y N 343 TRP CE3 CZ3 doub Y N 344 TRP CE3 HE3 sing N N 345 TRP CZ2 CH2 doub Y N 346 TRP CZ2 HZ2 sing N N 347 TRP CZ3 CH2 sing Y N 348 TRP CZ3 HZ3 sing N N 349 TRP CH2 HH2 sing N N 350 TRP OXT HXT sing N N 351 TYR N CA sing N N 352 TYR N H sing N N 353 TYR N H2 sing N N 354 TYR CA C sing N N 355 TYR CA CB sing N N 356 TYR CA HA sing N N 357 TYR C O doub N N 358 TYR C OXT sing N N 359 TYR CB CG sing N N 360 TYR CB HB2 sing N N 361 TYR CB HB3 sing N N 362 TYR CG CD1 doub Y N 363 TYR CG CD2 sing Y N 364 TYR CD1 CE1 sing Y N 365 TYR CD1 HD1 sing N N 366 TYR CD2 CE2 doub Y N 367 TYR CD2 HD2 sing N N 368 TYR CE1 CZ doub Y N 369 TYR CE1 HE1 sing N N 370 TYR CE2 CZ sing Y N 371 TYR CE2 HE2 sing N N 372 TYR CZ OH sing N N 373 TYR OH HH sing N N 374 TYR OXT HXT sing N N 375 VAL N CA sing N N 376 VAL N H sing N N 377 VAL N H2 sing N N 378 VAL CA C sing N N 379 VAL CA CB sing N N 380 VAL CA HA sing N N 381 VAL C O doub N N 382 VAL C OXT sing N N 383 VAL CB CG1 sing N N 384 VAL CB CG2 sing N N 385 VAL CB HB sing N N 386 VAL CG1 HG11 sing N N 387 VAL CG1 HG12 sing N N 388 VAL CG1 HG13 sing N N 389 VAL CG2 HG21 sing N N 390 VAL CG2 HG22 sing N N 391 VAL CG2 HG23 sing N N 392 VAL OXT HXT sing N N 393 # _atom_sites.entry_id 5DZ8 _atom_sites.fract_transf_matrix[1][1] 0.006750 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005144 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029053 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013578 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S SE # loop_