HEADER HYDROLASE 25-SEP-15 5DZM TITLE HIV-1 REVERSE TRANSCRIPTASE RH DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE H; COMPND 3 CHAIN: A, D, C, B; COMPND 4 EC: 3.1.26.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HIV, RIBONUCLEASE, UNFOLDING, REVERSE TRANSCRIPTASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.C.PEDERSEN,R.E.LONDON,S.A.GABEL,X.H.ZHENG REVDAT 3 27-SEP-23 5DZM 1 REMARK REVDAT 2 01-NOV-17 5DZM 1 JRNL REMARK REVDAT 1 11-MAY-16 5DZM 0 JRNL AUTH X.ZHENG,L.C.PEDERSEN,S.A.GABEL,G.A.MUELLER,E.F.DEROSE, JRNL AUTH 2 R.E.LONDON JRNL TITL UNFOLDING THE HIV-1 REVERSE TRANSCRIPTASE RNASE H DOMAIN - JRNL TITL 2 HOW TO LOSE A MOLECULAR TUG-OF-WAR. JRNL REF NUCLEIC ACIDS RES. V. 44 1776 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26773054 JRNL DOI 10.1093/NAR/GKV1538 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.190 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 28005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6323 - 4.4128 1.00 2808 144 0.1668 0.1838 REMARK 3 2 4.4128 - 3.5029 1.00 2795 153 0.1416 0.1898 REMARK 3 3 3.5029 - 3.0602 1.00 2840 149 0.1735 0.2289 REMARK 3 4 3.0602 - 2.7804 1.00 2808 147 0.1994 0.2424 REMARK 3 5 2.7804 - 2.5812 1.00 2804 154 0.2022 0.2773 REMARK 3 6 2.5812 - 2.4290 1.00 2808 144 0.1883 0.2174 REMARK 3 7 2.4290 - 2.3073 1.00 2837 152 0.1895 0.2415 REMARK 3 8 2.3073 - 2.2069 1.00 2825 146 0.1979 0.2948 REMARK 3 9 2.2069 - 2.1219 0.90 2517 132 0.2207 0.2612 REMARK 3 10 2.1219 - 2.0487 0.55 1548 94 0.2238 0.3104 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3537 REMARK 3 ANGLE : 0.824 4837 REMARK 3 CHIRALITY : 0.049 581 REMARK 3 PLANARITY : 0.003 632 REMARK 3 DIHEDRAL : 14.124 1265 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 40 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 423:432) REMARK 3 ORIGIN FOR THE GROUP (A): -59.8153 58.0876 1.7463 REMARK 3 T TENSOR REMARK 3 T11: 0.2204 T22: 0.1489 REMARK 3 T33: 0.2858 T12: 0.0621 REMARK 3 T13: 0.0383 T23: 0.0653 REMARK 3 L TENSOR REMARK 3 L11: 4.6469 L22: 3.3882 REMARK 3 L33: 6.0583 L12: -0.9348 REMARK 3 L13: 1.5527 L23: -1.2571 REMARK 3 S TENSOR REMARK 3 S11: 0.2503 S12: 0.5489 S13: 0.2967 REMARK 3 S21: -0.1055 S22: 0.0647 S23: 0.3038 REMARK 3 S31: -0.3929 S32: -0.1932 S33: -0.2584 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 433:446) REMARK 3 ORIGIN FOR THE GROUP (A): -50.4995 47.4796 12.7592 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.1217 REMARK 3 T33: 0.1536 T12: 0.0680 REMARK 3 T13: 0.0483 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 5.1842 L22: 2.9025 REMARK 3 L33: 4.2596 L12: -3.2845 REMARK 3 L13: -3.5729 L23: 2.1301 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.3582 S13: 0.2931 REMARK 3 S21: 0.0524 S22: 0.2046 S23: -0.2429 REMARK 3 S31: 0.1334 S32: 0.2437 S33: -0.1505 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 447:451) REMARK 3 ORIGIN FOR THE GROUP (A): -29.0903 43.7717 -1.3949 REMARK 3 T TENSOR REMARK 3 T11: 0.6319 T22: 0.8199 REMARK 3 T33: 1.0531 T12: 0.1711 REMARK 3 T13: 0.6720 T23: 0.0750 REMARK 3 L TENSOR REMARK 3 L11: 0.6079 L22: 0.1511 REMARK 3 L33: 0.2113 L12: 0.2141 REMARK 3 L13: 0.3501 L23: 0.0960 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: -0.2539 S13: 0.0217 REMARK 3 S21: -0.0092 S22: 0.0770 S23: -0.0849 REMARK 3 S31: 0.0303 S32: 0.3860 S33: -0.1208 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 452:470) REMARK 3 ORIGIN FOR THE GROUP (A): -45.4342 39.7373 8.6740 REMARK 3 T TENSOR REMARK 3 T11: 0.2811 T22: 0.1513 REMARK 3 T33: 0.2083 T12: 0.0615 REMARK 3 T13: 0.1360 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 3.5801 L22: 1.7514 REMARK 3 L33: 2.8667 L12: -0.6753 REMARK 3 L13: -1.3448 L23: 1.1343 REMARK 3 S TENSOR REMARK 3 S11: -0.1267 S12: -0.0042 S13: 0.0063 REMARK 3 S21: -0.2846 S22: 0.3227 S23: -0.4668 REMARK 3 S31: 0.0779 S32: 0.2767 S33: -0.0561 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 471:474) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9797 45.9655 -3.3268 REMARK 3 T TENSOR REMARK 3 T11: 0.5620 T22: 0.3861 REMARK 3 T33: 0.7384 T12: -0.0670 REMARK 3 T13: 0.4323 T23: 0.1101 REMARK 3 L TENSOR REMARK 3 L11: 5.1110 L22: 1.4277 REMARK 3 L33: 6.9554 L12: 2.0755 REMARK 3 L13: -3.2938 L23: -2.4044 REMARK 3 S TENSOR REMARK 3 S11: -0.4195 S12: 0.2060 S13: -0.7671 REMARK 3 S21: -0.4198 S22: -0.0963 S23: -0.5093 REMARK 3 S31: 0.6786 S32: 0.2085 S33: 0.4941 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 475:484) REMARK 3 ORIGIN FOR THE GROUP (A): -44.7453 47.1419 1.5898 REMARK 3 T TENSOR REMARK 3 T11: 0.2507 T22: 0.1582 REMARK 3 T33: 0.2152 T12: -0.0017 REMARK 3 T13: 0.0704 T23: -0.0723 REMARK 3 L TENSOR REMARK 3 L11: 4.5740 L22: 4.8052 REMARK 3 L33: 5.0181 L12: -0.7100 REMARK 3 L13: -2.6039 L23: -1.7722 REMARK 3 S TENSOR REMARK 3 S11: -0.0780 S12: 0.5510 S13: -0.2896 REMARK 3 S21: -0.6014 S22: 0.2851 S23: -0.6804 REMARK 3 S31: 0.1937 S32: 0.3533 S33: -0.2478 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 485:508) REMARK 3 ORIGIN FOR THE GROUP (A): -49.6878 51.7774 5.6274 REMARK 3 T TENSOR REMARK 3 T11: 0.1247 T22: 0.0858 REMARK 3 T33: 0.1138 T12: 0.0108 REMARK 3 T13: 0.0270 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 3.3224 L22: 3.4140 REMARK 3 L33: 3.3131 L12: 1.6179 REMARK 3 L13: -0.4252 L23: -0.4860 REMARK 3 S TENSOR REMARK 3 S11: -0.1127 S12: 0.1723 S13: 0.0474 REMARK 3 S21: -0.1084 S22: 0.3177 S23: 0.0785 REMARK 3 S31: -0.0146 S32: 0.2419 S33: -0.2097 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 509:516) REMARK 3 ORIGIN FOR THE GROUP (A): -50.9965 63.6446 -8.8125 REMARK 3 T TENSOR REMARK 3 T11: 0.2061 T22: 0.3465 REMARK 3 T33: 0.2956 T12: -0.0502 REMARK 3 T13: 0.0339 T23: 0.1216 REMARK 3 L TENSOR REMARK 3 L11: 7.7126 L22: 9.2324 REMARK 3 L33: 4.7828 L12: 3.2470 REMARK 3 L13: -5.3212 L23: -5.0487 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: -0.1429 S13: -0.1164 REMARK 3 S21: 0.3549 S22: -0.0994 S23: 0.5438 REMARK 3 S31: 0.2550 S32: -0.3022 S33: 0.0774 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 517:530) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7268 65.0719 -19.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.2086 T22: 0.2103 REMARK 3 T33: 0.1875 T12: -0.0209 REMARK 3 T13: 0.0008 T23: 0.0666 REMARK 3 L TENSOR REMARK 3 L11: 7.5607 L22: 4.3636 REMARK 3 L33: 6.9497 L12: 0.1617 REMARK 3 L13: -6.2566 L23: 0.0008 REMARK 3 S TENSOR REMARK 3 S11: -0.3951 S12: 0.1470 S13: -0.7295 REMARK 3 S21: -0.4835 S22: 0.1500 S23: 0.0075 REMARK 3 S31: 0.7504 S32: -0.4030 S33: 0.2075 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 531:537) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1985 71.4121 -8.2647 REMARK 3 T TENSOR REMARK 3 T11: 0.1036 T22: 0.2467 REMARK 3 T33: 0.1282 T12: 0.0514 REMARK 3 T13: -0.0149 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 3.1409 L22: 2.3699 REMARK 3 L33: 7.5303 L12: -1.1380 REMARK 3 L13: -1.4663 L23: 0.9363 REMARK 3 S TENSOR REMARK 3 S11: -0.2236 S12: -0.1802 S13: 0.0795 REMARK 3 S21: 0.0418 S22: -0.1436 S23: -0.0254 REMARK 3 S31: -0.0499 S32: -0.0753 S33: 0.2445 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 426:434) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4325 66.0068 -15.7528 REMARK 3 T TENSOR REMARK 3 T11: 0.1617 T22: 0.5484 REMARK 3 T33: 0.3448 T12: 0.1523 REMARK 3 T13: 0.0946 T23: 0.1360 REMARK 3 L TENSOR REMARK 3 L11: 4.4798 L22: 0.7646 REMARK 3 L33: 1.5306 L12: 0.7874 REMARK 3 L13: -2.4098 L23: -0.8079 REMARK 3 S TENSOR REMARK 3 S11: -0.3036 S12: -0.0941 S13: -0.9725 REMARK 3 S21: 0.0863 S22: 0.1227 S23: -0.2091 REMARK 3 S31: 0.2419 S32: 0.2644 S33: 0.2309 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 436:437) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2954 76.2426 -22.6615 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.4449 REMARK 3 T33: 0.1943 T12: -0.0129 REMARK 3 T13: -0.0188 T23: 0.2132 REMARK 3 L TENSOR REMARK 3 L11: 3.5822 L22: 1.9799 REMARK 3 L33: 3.2788 L12: 1.3068 REMARK 3 L13: 2.1579 L23: -0.9379 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: 0.0677 S13: 0.0209 REMARK 3 S21: 0.0169 S22: -0.0070 S23: -0.0154 REMARK 3 S31: -0.1199 S32: -0.0873 S33: 0.0200 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 439:448) REMARK 3 ORIGIN FOR THE GROUP (A): -37.4867 79.3083 -8.0103 REMARK 3 T TENSOR REMARK 3 T11: 0.3234 T22: 0.4423 REMARK 3 T33: 0.1417 T12: 0.0915 REMARK 3 T13: -0.0621 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 4.3826 L22: 3.5048 REMARK 3 L33: 4.3946 L12: 1.0758 REMARK 3 L13: -4.1575 L23: 0.1383 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.8883 S13: 0.3132 REMARK 3 S21: 0.6778 S22: -0.1209 S23: 0.1840 REMARK 3 S31: -0.8276 S32: -0.2118 S33: -0.1416 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 449:470) REMARK 3 ORIGIN FOR THE GROUP (A): -41.2079 82.1145 -12.3231 REMARK 3 T TENSOR REMARK 3 T11: 0.3081 T22: 0.3767 REMARK 3 T33: 0.1915 T12: 0.1282 REMARK 3 T13: -0.0708 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 4.4907 L22: 2.0091 REMARK 3 L33: 3.5600 L12: -0.7180 REMARK 3 L13: -2.4643 L23: 1.3472 REMARK 3 S TENSOR REMARK 3 S11: -0.0668 S12: -0.4324 S13: 0.3586 REMARK 3 S21: -0.0237 S22: -0.1558 S23: 0.2790 REMARK 3 S31: -1.0063 S32: -0.5742 S33: 0.0339 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 471:482) REMARK 3 ORIGIN FOR THE GROUP (A): -44.6239 73.7515 -6.6019 REMARK 3 T TENSOR REMARK 3 T11: -0.0106 T22: 0.7655 REMARK 3 T33: 0.1938 T12: 0.1924 REMARK 3 T13: -0.0162 T23: 0.0919 REMARK 3 L TENSOR REMARK 3 L11: 5.4008 L22: 3.3474 REMARK 3 L33: 1.6538 L12: 0.3717 REMARK 3 L13: -0.9989 L23: 0.3156 REMARK 3 S TENSOR REMARK 3 S11: -0.1041 S12: -0.8205 S13: 0.1037 REMARK 3 S21: 0.2986 S22: 0.1681 S23: 0.4608 REMARK 3 S31: -0.0869 S32: -0.9088 S33: 0.0357 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 483:497) REMARK 3 ORIGIN FOR THE GROUP (A): -34.3902 73.5578 -18.4307 REMARK 3 T TENSOR REMARK 3 T11: 0.0372 T22: 0.1772 REMARK 3 T33: 0.1086 T12: 0.0227 REMARK 3 T13: -0.0152 T23: 0.0639 REMARK 3 L TENSOR REMARK 3 L11: 1.9455 L22: 0.8695 REMARK 3 L33: 2.2711 L12: 0.6471 REMARK 3 L13: 0.5553 L23: 0.8649 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: -0.1515 S13: 0.0354 REMARK 3 S21: -0.1512 S22: 0.0093 S23: 0.0190 REMARK 3 S31: -0.3814 S32: -0.2747 S33: 0.1329 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN B AND RESID 498:506) REMARK 3 ORIGIN FOR THE GROUP (A): -36.1849 68.9958 -3.8191 REMARK 3 T TENSOR REMARK 3 T11: 0.1544 T22: 0.3921 REMARK 3 T33: 0.2360 T12: 0.0725 REMARK 3 T13: -0.0308 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 9.3342 L22: 6.3717 REMARK 3 L33: 6.6945 L12: 5.3197 REMARK 3 L13: 3.3281 L23: 3.4454 REMARK 3 S TENSOR REMARK 3 S11: 0.2680 S12: -0.7648 S13: 0.3432 REMARK 3 S21: 0.2749 S22: 0.1286 S23: 0.0146 REMARK 3 S31: 0.2942 S32: -0.1310 S33: -0.3306 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN B AND RESID 507:514) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7826 55.0818 -8.4626 REMARK 3 T TENSOR REMARK 3 T11: 0.5199 T22: 0.5340 REMARK 3 T33: 0.2989 T12: -0.1194 REMARK 3 T13: 0.0635 T23: 0.0906 REMARK 3 L TENSOR REMARK 3 L11: 5.0598 L22: 4.9634 REMARK 3 L33: 2.2713 L12: 4.2387 REMARK 3 L13: 2.6436 L23: 2.3968 REMARK 3 S TENSOR REMARK 3 S11: -0.8843 S12: 0.9809 S13: -0.2058 REMARK 3 S21: -0.4652 S22: 0.3972 S23: -0.3811 REMARK 3 S31: 0.6048 S32: -0.2277 S33: 0.4177 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN B AND RESID 515:524) REMARK 3 ORIGIN FOR THE GROUP (A): -51.7817 49.4170 -5.0416 REMARK 3 T TENSOR REMARK 3 T11: 0.3999 T22: 0.2084 REMARK 3 T33: 0.1979 T12: -0.1088 REMARK 3 T13: 0.0161 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 7.8127 L22: 2.1930 REMARK 3 L33: 2.9447 L12: -0.2478 REMARK 3 L13: -0.0057 L23: -0.5946 REMARK 3 S TENSOR REMARK 3 S11: -0.3281 S12: 0.9794 S13: -0.6720 REMARK 3 S21: -0.7405 S22: 0.2969 S23: -0.0433 REMARK 3 S31: 0.2695 S32: 0.1380 S33: 0.0911 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN B AND RESID 525:538) REMARK 3 ORIGIN FOR THE GROUP (A): -54.2429 53.0903 7.9707 REMARK 3 T TENSOR REMARK 3 T11: 0.1168 T22: 0.0334 REMARK 3 T33: 0.1212 T12: 0.0218 REMARK 3 T13: 0.0290 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 3.1610 L22: 3.5600 REMARK 3 L33: 2.2985 L12: 1.1082 REMARK 3 L13: 0.3790 L23: 0.2602 REMARK 3 S TENSOR REMARK 3 S11: -0.0388 S12: 0.0159 S13: -0.2087 REMARK 3 S21: -0.0413 S22: 0.1845 S23: 0.1151 REMARK 3 S31: -0.1206 S32: -0.1204 S33: -0.1506 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN C AND RESID 423:432) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5511 80.8419 4.6705 REMARK 3 T TENSOR REMARK 3 T11: 0.2676 T22: 0.1723 REMARK 3 T33: 0.2805 T12: 0.0610 REMARK 3 T13: 0.1202 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 3.0824 L22: 3.8052 REMARK 3 L33: 4.9176 L12: 0.1868 REMARK 3 L13: 0.7466 L23: 2.1216 REMARK 3 S TENSOR REMARK 3 S11: 0.2420 S12: -0.2387 S13: 0.4165 REMARK 3 S21: 0.4068 S22: 0.0283 S23: 0.1453 REMARK 3 S31: -0.8582 S32: -0.6729 S33: -0.1097 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN C AND RESID 433:446) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8603 67.4705 -6.1079 REMARK 3 T TENSOR REMARK 3 T11: 0.2048 T22: 0.1246 REMARK 3 T33: 0.1597 T12: 0.0651 REMARK 3 T13: 0.0501 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.7986 L22: 5.5310 REMARK 3 L33: 4.6935 L12: -0.5451 REMARK 3 L13: -0.2682 L23: -3.8996 REMARK 3 S TENSOR REMARK 3 S11: 0.0536 S12: 0.1202 S13: -0.0492 REMARK 3 S21: -0.3844 S22: 0.1816 S23: 0.3143 REMARK 3 S31: 0.2760 S32: -0.0376 S33: -0.1757 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN C AND RESID 447:450) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8233 46.5863 7.6735 REMARK 3 T TENSOR REMARK 3 T11: 0.9373 T22: 0.8149 REMARK 3 T33: 0.8780 T12: -0.1475 REMARK 3 T13: 0.4649 T23: 0.4499 REMARK 3 L TENSOR REMARK 3 L11: 1.6649 L22: 2.8472 REMARK 3 L33: 2.7729 L12: 0.8131 REMARK 3 L13: 0.7649 L23: -1.6603 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.1535 S13: 0.1183 REMARK 3 S21: -0.0582 S22: 0.0678 S23: 0.0974 REMARK 3 S31: -0.1672 S32: 0.0270 S33: -0.0917 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN C AND RESID 451:463) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2731 60.5804 -3.8845 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.0426 REMARK 3 T33: 0.1669 T12: 0.2224 REMARK 3 T13: 0.1061 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.5320 L22: 2.5755 REMARK 3 L33: 3.4929 L12: -0.6224 REMARK 3 L13: 0.5368 L23: -0.4607 REMARK 3 S TENSOR REMARK 3 S11: 0.2774 S12: -0.2049 S13: -0.4971 REMARK 3 S21: -0.1263 S22: 0.0378 S23: 0.1616 REMARK 3 S31: 0.4119 S32: -0.0573 S33: 0.3791 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: (CHAIN C AND RESID 464:469) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2322 56.0438 1.1161 REMARK 3 T TENSOR REMARK 3 T11: 0.2089 T22: 0.2554 REMARK 3 T33: 0.3038 T12: 0.0871 REMARK 3 T13: 0.0517 T23: 0.1104 REMARK 3 L TENSOR REMARK 3 L11: 5.0172 L22: 5.1105 REMARK 3 L33: 8.7801 L12: 4.9908 REMARK 3 L13: -6.1409 L23: -6.5277 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: -0.6061 S13: -0.7520 REMARK 3 S21: 0.1099 S22: 0.2436 S23: 0.3721 REMARK 3 S31: 0.1964 S32: -0.2749 S33: -0.1353 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: (CHAIN C AND RESID 470:474) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5367 53.9046 9.9044 REMARK 3 T TENSOR REMARK 3 T11: 0.4156 T22: 0.4684 REMARK 3 T33: 0.6669 T12: 0.0767 REMARK 3 T13: 0.2561 T23: 0.3675 REMARK 3 L TENSOR REMARK 3 L11: 4.5787 L22: 1.6807 REMARK 3 L33: 3.1406 L12: 1.5236 REMARK 3 L13: -3.3526 L23: -1.0844 REMARK 3 S TENSOR REMARK 3 S11: -0.2636 S12: -0.6285 S13: -0.6429 REMARK 3 S21: 0.0611 S22: -0.0613 S23: -0.2873 REMARK 3 S31: 0.5017 S32: 0.3472 S33: 0.3759 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: (CHAIN C AND RESID 475:484) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4144 62.3115 5.0425 REMARK 3 T TENSOR REMARK 3 T11: 0.2001 T22: 0.2319 REMARK 3 T33: 0.1919 T12: 0.0660 REMARK 3 T13: -0.0178 T23: 0.0889 REMARK 3 L TENSOR REMARK 3 L11: 6.4929 L22: 7.0822 REMARK 3 L33: 4.4696 L12: 1.6530 REMARK 3 L13: -0.9531 L23: 0.2501 REMARK 3 S TENSOR REMARK 3 S11: 0.2163 S12: -0.7378 S13: -0.5487 REMARK 3 S21: 0.3375 S22: -0.1928 S23: -0.1463 REMARK 3 S31: 0.4650 S32: -0.0346 S33: -0.0916 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: (CHAIN C AND RESID 485:509) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2059 69.1771 1.5253 REMARK 3 T TENSOR REMARK 3 T11: 0.0858 T22: 0.1233 REMARK 3 T33: 0.1403 T12: 0.0308 REMARK 3 T13: 0.0061 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.6338 L22: 1.5000 REMARK 3 L33: 2.9488 L12: 0.6920 REMARK 3 L13: -0.4287 L23: -0.2117 REMARK 3 S TENSOR REMARK 3 S11: 0.2540 S12: -0.3239 S13: -0.0094 REMARK 3 S21: -0.0512 S22: -0.0798 S23: -0.0643 REMARK 3 S31: 0.1362 S32: -0.1569 S33: -0.1744 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: (CHAIN C AND RESID 510:527) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5996 70.8916 20.9235 REMARK 3 T TENSOR REMARK 3 T11: 0.2244 T22: 0.2556 REMARK 3 T33: 0.2292 T12: -0.0472 REMARK 3 T13: 0.0749 T23: -0.0680 REMARK 3 L TENSOR REMARK 3 L11: 6.7618 L22: 7.3470 REMARK 3 L33: 7.7077 L12: 5.8888 REMARK 3 L13: -6.7670 L23: -6.9348 REMARK 3 S TENSOR REMARK 3 S11: 0.2147 S12: -0.5464 S13: -0.0662 REMARK 3 S21: -0.0003 S22: -0.4135 S23: -0.6401 REMARK 3 S31: -0.3389 S32: 0.7810 S33: 0.1256 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: (CHAIN C AND RESID 528:537) REMARK 3 ORIGIN FOR THE GROUP (A): -46.1856 59.6677 19.6835 REMARK 3 T TENSOR REMARK 3 T11: 0.2325 T22: 0.0840 REMARK 3 T33: 0.1669 T12: -0.0180 REMARK 3 T13: 0.0738 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 2.1105 L22: 2.5573 REMARK 3 L33: 2.6517 L12: 0.9227 REMARK 3 L13: -0.0022 L23: 2.3973 REMARK 3 S TENSOR REMARK 3 S11: -0.2389 S12: -0.1116 S13: -0.1488 REMARK 3 S21: -0.0393 S22: -0.1621 S23: -0.2550 REMARK 3 S31: 0.4214 S32: -0.1081 S33: 0.1250 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: (CHAIN D AND RESID 427:434) REMARK 3 ORIGIN FOR THE GROUP (A): -44.8154 54.9412 22.3032 REMARK 3 T TENSOR REMARK 3 T11: 0.6055 T22: 0.1999 REMARK 3 T33: 0.2968 T12: -0.0022 REMARK 3 T13: 0.2021 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 5.8058 L22: 2.5282 REMARK 3 L33: 1.9585 L12: 1.3836 REMARK 3 L13: -0.9315 L23: 0.2099 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.1075 S13: -0.5379 REMARK 3 S21: -0.3915 S22: -0.2141 S23: -0.5122 REMARK 3 S31: 0.9617 S32: 0.0553 S33: 0.1436 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: (CHAIN D AND RESID 435:438) REMARK 3 ORIGIN FOR THE GROUP (A): -53.8116 60.0479 28.3568 REMARK 3 T TENSOR REMARK 3 T11: 0.3799 T22: 0.2825 REMARK 3 T33: 0.0712 T12: -0.2236 REMARK 3 T13: 0.1261 T23: -0.2911 REMARK 3 L TENSOR REMARK 3 L11: 0.9118 L22: 1.5758 REMARK 3 L33: 4.4025 L12: -0.0111 REMARK 3 L13: 0.0043 L23: -2.3766 REMARK 3 S TENSOR REMARK 3 S11: -0.0374 S12: -0.0494 S13: -0.0860 REMARK 3 S21: -0.0833 S22: -0.0929 S23: 0.1485 REMARK 3 S31: 0.4346 S32: -0.2133 S33: 0.0760 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: (CHAIN D AND RESID 439:448) REMARK 3 ORIGIN FOR THE GROUP (A): -49.9702 72.0996 14.6538 REMARK 3 T TENSOR REMARK 3 T11: 0.5470 T22: 0.2897 REMARK 3 T33: 0.1379 T12: -0.0336 REMARK 3 T13: -0.0684 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 5.0007 L22: 3.5812 REMARK 3 L33: 6.3519 L12: 0.8875 REMARK 3 L13: -2.4348 L23: -4.6057 REMARK 3 S TENSOR REMARK 3 S11: -0.2937 S12: 0.7735 S13: 0.3545 REMARK 3 S21: -0.8917 S22: 0.0795 S23: 0.2019 REMARK 3 S31: -0.6216 S32: -0.5604 S33: -0.2333 REMARK 3 TLS GROUP : 34 REMARK 3 SELECTION: (CHAIN D AND RESID 449:464) REMARK 3 ORIGIN FOR THE GROUP (A): -51.9028 74.9192 19.1652 REMARK 3 T TENSOR REMARK 3 T11: 0.3581 T22: 0.2544 REMARK 3 T33: 0.1688 T12: 0.0285 REMARK 3 T13: -0.0947 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 3.2654 L22: 6.2135 REMARK 3 L33: 8.4417 L12: 2.0019 REMARK 3 L13: -2.7850 L23: -5.5434 REMARK 3 S TENSOR REMARK 3 S11: -0.3583 S12: 0.2824 S13: 0.3301 REMARK 3 S21: -0.2668 S22: 0.3219 S23: 0.5152 REMARK 3 S31: -0.7668 S32: -0.8999 S33: -0.1739 REMARK 3 TLS GROUP : 35 REMARK 3 SELECTION: (CHAIN D AND RESID 465:482) REMARK 3 ORIGIN FOR THE GROUP (A): -43.4514 77.3905 15.0159 REMARK 3 T TENSOR REMARK 3 T11: 0.6330 T22: 0.1565 REMARK 3 T33: 0.2414 T12: -0.0914 REMARK 3 T13: 0.0319 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.0675 L22: 3.2477 REMARK 3 L33: 1.5504 L12: 0.3880 REMARK 3 L13: 1.0981 L23: -1.0449 REMARK 3 S TENSOR REMARK 3 S11: -0.3203 S12: 0.3278 S13: 0.4928 REMARK 3 S21: -0.5870 S22: 0.4320 S23: -0.0508 REMARK 3 S31: -1.0505 S32: 0.0774 S33: -0.1111 REMARK 3 TLS GROUP : 36 REMARK 3 SELECTION: (CHAIN D AND RESID 483:497) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4958 66.5645 25.1007 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.0701 REMARK 3 T33: 0.1023 T12: -0.0581 REMARK 3 T13: 0.0499 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 2.3515 L22: 2.0602 REMARK 3 L33: 2.6789 L12: 1.0965 REMARK 3 L13: 1.5442 L23: 0.5519 REMARK 3 S TENSOR REMARK 3 S11: -0.1558 S12: -0.1368 S13: -0.0800 REMARK 3 S21: 0.0423 S22: 0.0555 S23: -0.0283 REMARK 3 S31: -0.4517 S32: -0.1265 S33: 0.1473 REMARK 3 TLS GROUP : 37 REMARK 3 SELECTION: (CHAIN D AND RESID 498:508) REMARK 3 ORIGIN FOR THE GROUP (A): -40.3861 65.0521 10.8950 REMARK 3 T TENSOR REMARK 3 T11: 0.4061 T22: 0.2176 REMARK 3 T33: 0.2287 T12: -0.1050 REMARK 3 T13: 0.0566 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 2.0637 L22: 3.9960 REMARK 3 L33: 6.2081 L12: 1.4606 REMARK 3 L13: 2.9786 L23: 0.4748 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: 0.5309 S13: -0.1543 REMARK 3 S21: -0.5856 S22: 0.4051 S23: 0.0926 REMARK 3 S31: -0.1281 S32: 0.5056 S33: -0.3243 REMARK 3 TLS GROUP : 38 REMARK 3 SELECTION: (CHAIN D AND RESID 509:514) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9424 63.4262 15.8842 REMARK 3 T TENSOR REMARK 3 T11: 0.4067 T22: 0.6442 REMARK 3 T33: 0.4477 T12: -0.0379 REMARK 3 T13: 0.1068 T23: 0.1005 REMARK 3 L TENSOR REMARK 3 L11: 6.1036 L22: 2.0189 REMARK 3 L33: 7.4349 L12: -0.6321 REMARK 3 L13: 4.7041 L23: -3.2123 REMARK 3 S TENSOR REMARK 3 S11: -0.0907 S12: -0.9797 S13: -0.7513 REMARK 3 S21: 0.5925 S22: -0.3935 S23: 0.1982 REMARK 3 S31: 0.2479 S32: -0.1507 S33: 0.3431 REMARK 3 TLS GROUP : 39 REMARK 3 SELECTION: (CHAIN D AND RESID 515:520) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2318 67.9045 13.2405 REMARK 3 T TENSOR REMARK 3 T11: 0.2139 T22: 0.5894 REMARK 3 T33: 0.2007 T12: -0.0129 REMARK 3 T13: 0.0129 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 5.4606 L22: 5.0969 REMARK 3 L33: 4.0532 L12: 5.0067 REMARK 3 L13: -1.5411 L23: -0.5319 REMARK 3 S TENSOR REMARK 3 S11: 0.1538 S12: -1.4008 S13: -0.4599 REMARK 3 S21: 0.7810 S22: -0.3149 S23: -0.0857 REMARK 3 S31: 0.1330 S32: 0.3961 S33: 0.0785 REMARK 3 TLS GROUP : 40 REMARK 3 SELECTION: (CHAIN D AND RESID 521:538) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3550 72.9433 0.5716 REMARK 3 T TENSOR REMARK 3 T11: 0.0761 T22: 0.1128 REMARK 3 T33: 0.1189 T12: 0.0666 REMARK 3 T13: 0.0318 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.6633 L22: 1.4953 REMARK 3 L33: 3.8368 L12: 0.1796 REMARK 3 L13: 0.9546 L23: -0.1255 REMARK 3 S TENSOR REMARK 3 S11: 0.1211 S12: -0.2496 S13: -0.1366 REMARK 3 S21: -0.1580 S22: 0.0932 S23: -0.1605 REMARK 3 S31: -0.0906 S32: -0.0555 S33: -0.2578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DZM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000214072. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29211 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.37600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3K2P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM ACETATE, 0.1M BIS-TRIS REMARK 280 PH 5.5, 17% PEG 10,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.16600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.58300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS MOLECULE IN ITS BIOLOGICAL CONTEXT IS THE C-TERMINAL REMARK 300 DOMAIN OF THE HIV RT PROTEIN. IT CAN RUN AS EITHER A MONOMER OR REMARK 300 DIMER ON GEL FILTRATION. IN THE CRYSTAL STRUCTURE IT HAS FORMED A REMARK 300 DOMAIN-SWAPPED DIMER WITH THE C-TERMINAL HELIX-STRAND SWAPPING REMARK 300 BETWEEN TWO MONOMERS. IN THE CRYSTAL STRUCTURE TWO DOMAIN-SWAPPED REMARK 300 DIMERS COME TOGETHER TO FORM WHAT LOOKS LIKE A TETRAMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 538 REMARK 465 HIS A 539 REMARK 465 LYS A 540 REMARK 465 GLY A 541 REMARK 465 ILE A 542 REMARK 465 GLY A 543 REMARK 465 GLY A 544 REMARK 465 ASN A 545 REMARK 465 GLU A 546 REMARK 465 GLN A 547 REMARK 465 VAL A 548 REMARK 465 ASP A 549 REMARK 465 LYS A 550 REMARK 465 LEU A 551 REMARK 465 VAL A 552 REMARK 465 SER A 553 REMARK 465 ALA A 554 REMARK 465 GLY A 555 REMARK 465 ILE A 556 REMARK 465 ARG A 557 REMARK 465 LYS A 558 REMARK 465 VAL A 559 REMARK 465 LEU A 560 REMARK 465 MET D 423 REMARK 465 ASN D 424 REMARK 465 GLU D 425 REMARK 465 LEU D 426 REMARK 465 HIS D 539 REMARK 465 LYS D 540 REMARK 465 GLY D 541 REMARK 465 ILE D 542 REMARK 465 GLY D 543 REMARK 465 GLY D 544 REMARK 465 ASN D 545 REMARK 465 GLU D 546 REMARK 465 GLN D 547 REMARK 465 VAL D 548 REMARK 465 ASP D 549 REMARK 465 LYS D 550 REMARK 465 LEU D 551 REMARK 465 VAL D 552 REMARK 465 SER D 553 REMARK 465 ALA D 554 REMARK 465 GLY D 555 REMARK 465 ILE D 556 REMARK 465 ARG D 557 REMARK 465 LYS D 558 REMARK 465 VAL D 559 REMARK 465 LEU D 560 REMARK 465 ALA C 538 REMARK 465 HIS C 539 REMARK 465 LYS C 540 REMARK 465 GLY C 541 REMARK 465 ILE C 542 REMARK 465 GLY C 543 REMARK 465 GLY C 544 REMARK 465 ASN C 545 REMARK 465 GLU C 546 REMARK 465 GLN C 547 REMARK 465 VAL C 548 REMARK 465 ASP C 549 REMARK 465 LYS C 550 REMARK 465 LEU C 551 REMARK 465 VAL C 552 REMARK 465 SER C 553 REMARK 465 ALA C 554 REMARK 465 GLY C 555 REMARK 465 ILE C 556 REMARK 465 ARG C 557 REMARK 465 LYS C 558 REMARK 465 VAL C 559 REMARK 465 LEU C 560 REMARK 465 MET B 423 REMARK 465 ASN B 424 REMARK 465 GLU B 425 REMARK 465 HIS B 539 REMARK 465 LYS B 540 REMARK 465 GLY B 541 REMARK 465 ILE B 542 REMARK 465 GLY B 543 REMARK 465 GLY B 544 REMARK 465 ASN B 545 REMARK 465 GLU B 546 REMARK 465 GLN B 547 REMARK 465 VAL B 548 REMARK 465 ASP B 549 REMARK 465 LYS B 550 REMARK 465 LEU B 551 REMARK 465 VAL B 552 REMARK 465 SER B 553 REMARK 465 ALA B 554 REMARK 465 GLY B 555 REMARK 465 ILE B 556 REMARK 465 ARG B 557 REMARK 465 LYS B 558 REMARK 465 VAL B 559 REMARK 465 LEU B 560 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 431 CG CD CE NZ REMARK 470 ARG A 448 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 449 CG CD OE1 OE2 REMARK 470 THR A 450 OG1 CG2 REMARK 470 LYS A 451 CG CD CE NZ REMARK 470 LEU A 452 CG CD1 CD2 REMARK 470 LYS A 454 CD CE NZ REMARK 470 GLN A 475 CG CD OE1 NE2 REMARK 470 LYS A 476 CE NZ REMARK 470 LYS A 527 CD CE NZ REMARK 470 GLN D 428 CG CD OE1 NE2 REMARK 470 LYS D 431 CG CD CE NZ REMARK 470 ARG D 448 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 449 CG CD OE1 OE2 REMARK 470 LEU D 452 CG CD1 CD2 REMARK 470 LYS D 454 CE NZ REMARK 470 GLN D 512 CG CD OE1 NE2 REMARK 470 GLU D 516 CG CD OE1 OE2 REMARK 470 GLU D 523 CG CD OE1 OE2 REMARK 470 LYS D 527 CD CE NZ REMARK 470 LYS D 530 CD CE NZ REMARK 470 GLU C 425 OE1 OE2 REMARK 470 LYS C 431 CG CD CE NZ REMARK 470 ARG C 448 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 449 CG CD OE1 OE2 REMARK 470 LYS C 451 CG CD CE NZ REMARK 470 LEU C 452 CG CD1 CD2 REMARK 470 ASP C 471 CG OD1 OD2 REMARK 470 GLN C 475 CG CD OE1 NE2 REMARK 470 LYS C 476 CE NZ REMARK 470 LEU B 426 N CA CB CG CD1 CD2 REMARK 470 GLN B 428 CG CD OE1 NE2 REMARK 470 LYS B 431 CG CD CE NZ REMARK 470 ARG B 448 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 449 CG CD OE1 OE2 REMARK 470 LEU B 452 CG CD1 CD2 REMARK 470 LYS B 454 CE NZ REMARK 470 GLN B 464 CD OE1 NE2 REMARK 470 GLN B 512 CG CD OE1 NE2 REMARK 470 SER B 513 OG REMARK 470 GLU B 523 CG CD OE1 OE2 REMARK 470 LYS B 527 CE NZ REMARK 470 LYS B 530 CE NZ REMARK 470 ALA B 538 C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 511 -159.81 -76.78 REMARK 500 ASP C 471 74.94 51.54 REMARK 500 ASP B 511 -162.70 -76.05 REMARK 500 REMARK 500 REMARK: NULL DBREF 5DZM A 423 560 UNP Q7LYY8 Q7LYY8_9HIV1 1 138 DBREF 5DZM D 423 560 UNP Q7LYY8 Q7LYY8_9HIV1 1 138 DBREF 5DZM C 423 560 UNP Q7LYY8 Q7LYY8_9HIV1 1 138 DBREF 5DZM B 423 560 UNP Q7LYY8 Q7LYY8_9HIV1 1 138 SEQRES 1 A 138 MET ASN GLU LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL SEQRES 2 A 138 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG SEQRES 3 A 138 GLU THR LYS LEU GLY LYS ALA GLY TYR VAL THR ASN ARG SEQRES 4 A 138 GLY ARG GLN LYS VAL VAL THR LEU THR ASP THR THR ASN SEQRES 5 A 138 GLN LYS THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN SEQRES 6 A 138 ASP SER GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN SEQRES 7 A 138 TYR ALA LEU GLY ILE ILE GLN ALA GLN PRO ASP GLN SER SEQRES 8 A 138 GLU SER GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE SEQRES 9 A 138 LYS LYS GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS SEQRES 10 A 138 LYS GLY ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SEQRES 11 A 138 SER ALA GLY ILE ARG LYS VAL LEU SEQRES 1 D 138 MET ASN GLU LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL SEQRES 2 D 138 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG SEQRES 3 D 138 GLU THR LYS LEU GLY LYS ALA GLY TYR VAL THR ASN ARG SEQRES 4 D 138 GLY ARG GLN LYS VAL VAL THR LEU THR ASP THR THR ASN SEQRES 5 D 138 GLN LYS THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN SEQRES 6 D 138 ASP SER GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN SEQRES 7 D 138 TYR ALA LEU GLY ILE ILE GLN ALA GLN PRO ASP GLN SER SEQRES 8 D 138 GLU SER GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE SEQRES 9 D 138 LYS LYS GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS SEQRES 10 D 138 LYS GLY ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SEQRES 11 D 138 SER ALA GLY ILE ARG LYS VAL LEU SEQRES 1 C 138 MET ASN GLU LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL SEQRES 2 C 138 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG SEQRES 3 C 138 GLU THR LYS LEU GLY LYS ALA GLY TYR VAL THR ASN ARG SEQRES 4 C 138 GLY ARG GLN LYS VAL VAL THR LEU THR ASP THR THR ASN SEQRES 5 C 138 GLN LYS THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN SEQRES 6 C 138 ASP SER GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN SEQRES 7 C 138 TYR ALA LEU GLY ILE ILE GLN ALA GLN PRO ASP GLN SER SEQRES 8 C 138 GLU SER GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE SEQRES 9 C 138 LYS LYS GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS SEQRES 10 C 138 LYS GLY ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SEQRES 11 C 138 SER ALA GLY ILE ARG LYS VAL LEU SEQRES 1 B 138 MET ASN GLU LEU TYR GLN LEU GLU LYS GLU PRO ILE VAL SEQRES 2 B 138 GLY ALA GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG SEQRES 3 B 138 GLU THR LYS LEU GLY LYS ALA GLY TYR VAL THR ASN ARG SEQRES 4 B 138 GLY ARG GLN LYS VAL VAL THR LEU THR ASP THR THR ASN SEQRES 5 B 138 GLN LYS THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN SEQRES 6 B 138 ASP SER GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN SEQRES 7 B 138 TYR ALA LEU GLY ILE ILE GLN ALA GLN PRO ASP GLN SER SEQRES 8 B 138 GLU SER GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE SEQRES 9 B 138 LYS LYS GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS SEQRES 10 B 138 LYS GLY ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SEQRES 11 B 138 SER ALA GLY ILE ARG LYS VAL LEU FORMUL 5 HOH *225(H2 O) HELIX 1 AA1 THR A 473 SER A 489 1 17 HELIX 2 AA2 SER A 499 GLN A 509 1 11 HELIX 3 AA3 ASP A 511 LYS A 528 1 18 HELIX 4 AA4 THR D 473 ASP D 488 1 16 HELIX 5 AA5 SER D 499 ALA D 508 1 10 HELIX 6 AA6 ASP D 511 LYS D 528 1 18 HELIX 7 AA7 THR C 473 SER C 489 1 17 HELIX 8 AA8 SER C 499 GLN C 509 1 11 HELIX 9 AA9 ASP C 511 LYS C 528 1 18 HELIX 10 AB1 THR B 473 ASP B 488 1 16 HELIX 11 AB2 SER B 499 ALA B 508 1 10 HELIX 12 AB3 ASP B 511 LYS B 528 1 18 SHEET 1 AA1 5 GLN A 464 LEU A 469 0 SHEET 2 AA1 5 GLY A 453 THR A 459 -1 N ALA A 455 O VAL A 467 SHEET 3 AA1 5 GLU A 438 ALA A 446 -1 N TYR A 441 O VAL A 458 SHEET 4 AA1 5 GLU A 492 THR A 497 1 O ASN A 494 N PHE A 440 SHEET 5 AA1 5 LYS B 530 TRP B 535 1 O TYR B 532 N ILE A 495 SHEET 1 AA2 5 LYS A 530 TRP A 535 0 SHEET 2 AA2 5 GLU B 492 THR B 497 1 O ILE B 495 N TYR A 532 SHEET 3 AA2 5 GLU B 438 ALA B 446 1 N PHE B 440 O ASN B 494 SHEET 4 AA2 5 GLY B 453 THR B 459 -1 O VAL B 458 N TYR B 441 SHEET 5 AA2 5 GLN B 464 LEU B 469 -1 O LEU B 469 N GLY B 453 SHEET 1 AA3 5 GLN D 464 LEU D 469 0 SHEET 2 AA3 5 GLY D 453 THR D 459 -1 N ALA D 455 O VAL D 467 SHEET 3 AA3 5 GLU D 438 ALA D 446 -1 N TYR D 441 O VAL D 458 SHEET 4 AA3 5 GLU D 492 THR D 497 1 O ASN D 494 N PHE D 440 SHEET 5 AA3 5 LYS C 530 TRP C 535 1 O TYR C 532 N ILE D 495 SHEET 1 AA4 5 LYS D 530 TRP D 535 0 SHEET 2 AA4 5 GLU C 492 THR C 497 1 O ILE C 495 N TYR D 532 SHEET 3 AA4 5 GLU C 438 ALA C 446 1 N PHE C 440 O ASN C 494 SHEET 4 AA4 5 GLY C 453 THR C 459 -1 O VAL C 458 N TYR C 441 SHEET 5 AA4 5 GLN C 464 LEU C 469 -1 O VAL C 467 N ALA C 455 CRYST1 56.140 56.140 133.749 90.00 90.00 120.00 P 32 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017813 0.010284 0.000000 0.00000 SCALE2 0.000000 0.020568 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007477 0.00000