HEADER HYDROLASE 29-SEP-15 5E0O TITLE BRUGIA MALAYI TREHALOSE-6 PHOSPHATE PHOSPHATASE IN COMPLEX WITH PEG AT TITLE 2 THE ACTIVE SITE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TREHALOSE-PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TREHALOSE-6-PHOSPHATE PHOSPHATASE,TPP; COMPND 5 EC: 3.1.3.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUGIA MALAYI; SOURCE 3 ORGANISM_COMMON: FILARIAL NEMATODE WORM; SOURCE 4 ORGANISM_TAXID: 6279; SOURCE 5 GENE: BM1_08695; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS HAD, COMPLEX, PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.AGARWAL,S.MISRA-BHATTACHARYA,R.RAVISHANKAR REVDAT 3 23-OCT-24 5E0O 1 REMARK REVDAT 2 08-NOV-23 5E0O 1 JRNL REMARK REVDAT 1 28-OCT-15 5E0O 0 JRNL AUTH A.AGARWAL,S.MISRA-BHATTACHARYA,R.RAVISHANKAR JRNL TITL BRUGIA MALAYI TREHALOSE PHOSPHATE PHOSPHATASE IN COMPLEX JRNL TITL 2 WITH PEG AT THE ACTIVE SITE JRNL REF TO BE PUBLISHED 2015 JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.D.FARELLI,B.D.GALVIN,Z.LI,C.LIU,M.AONO,M.GARLAND, REMARK 1 AUTH 2 O.E.HALLETT,T.B.CAUSEY,A.ALI-REYNOLDS,D.J.SALTZBERG, REMARK 1 AUTH 3 C.K.CARLOW,D.DUNAWAY-MARIANO,K.N.ALLEN REMARK 1 TITL STRUCTURE OF THE TREHALOSE-6-PHOSPHATE PHOSPHATASE FROM REMARK 1 TITL 2 BRUGIA MALAYI REVEALS KEY DESIGN PRINCIPLES FOR ANTHELMINTIC REMARK 1 TITL 3 DRUGS. REMARK 1 REF PLOS PATHOG. V. 10 04245 2014 REMARK 1 REFN ESSN 1553-7374 REMARK 1 PMID 24992307 REMARK 1 DOI 10.1371/JOURNAL.PPAT.1004245 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9-1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 15235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.3019 -6.1523 21.7835 REMARK 3 T TENSOR REMARK 3 T11: 0.3837 T22: 0.1823 REMARK 3 T33: 0.4463 T12: -0.0308 REMARK 3 T13: 0.1781 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.7767 L22: 0.4933 REMARK 3 L33: 0.1173 L12: 0.4360 REMARK 3 L13: 0.0924 L23: 0.0626 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: -0.1042 S13: 0.4284 REMARK 3 S21: 0.3766 S22: -0.0507 S23: 0.4483 REMARK 3 S31: -0.1276 S32: -0.1385 S33: -0.1084 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.4737 -20.5458 3.8292 REMARK 3 T TENSOR REMARK 3 T11: 0.2848 T22: 0.2734 REMARK 3 T33: 0.3697 T12: -0.0845 REMARK 3 T13: -0.0387 T23: 0.0769 REMARK 3 L TENSOR REMARK 3 L11: 0.2857 L22: 0.3577 REMARK 3 L33: 0.5589 L12: 0.1775 REMARK 3 L13: -0.1452 L23: -0.3515 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: 0.1049 S13: 0.1995 REMARK 3 S21: -0.1087 S22: 0.0667 S23: 0.3050 REMARK 3 S31: 0.1341 S32: -0.3205 S33: 0.1743 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 389 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.4149 -27.9512 18.3223 REMARK 3 T TENSOR REMARK 3 T11: 0.3900 T22: 0.2455 REMARK 3 T33: 0.3562 T12: -0.1106 REMARK 3 T13: 0.0108 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 0.2727 L22: 0.1924 REMARK 3 L33: 0.2122 L12: 0.1550 REMARK 3 L13: 0.0312 L23: -0.0350 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: -0.0642 S13: -0.1502 REMARK 3 S21: 0.1112 S22: -0.0051 S23: -0.0619 REMARK 3 S31: -0.0629 S32: 0.1070 S33: -0.0029 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : SI (III) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18275 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.859 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 25.60 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 20.40 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4OFZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LARGE GOOD DIFFRACTABLE CRYSTAL GROW REMARK 280 WITH IN 7-8 DAYS., PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.31867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.63733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 34.31867 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.63733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 34.31867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 68.63733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 34.31867 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 68.63733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.31867 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 619 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 VAL A 5 REMARK 465 THR A 6 REMARK 465 ASP A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 9 REMARK 465 LYS A 10 REMARK 465 GLN A 11 REMARK 465 ARG A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 LYS A 15 REMARK 465 LEU A 16 REMARK 465 GLN A 17 REMARK 465 LYS A 18 REMARK 465 ASN A 19 REMARK 465 GLU A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 LYS A 23 REMARK 465 ASP A 24 REMARK 465 GLU A 25 REMARK 465 GLN A 26 REMARK 465 VAL A 27 REMARK 465 GLU A 28 REMARK 465 GLY A 29 REMARK 465 LYS A 30 REMARK 465 GLY A 31 REMARK 465 LYS A 32 REMARK 465 GLU A 33 REMARK 465 THR A 34 REMARK 465 LEU A 35 REMARK 465 GLU A 36 REMARK 465 SER A 37 REMARK 465 GLY A 38 REMARK 465 THR A 39 REMARK 465 ASP A 40 REMARK 465 LYS A 41 REMARK 465 SER A 42 REMARK 465 ALA A 43 REMARK 465 GLU A 44 REMARK 465 GLN A 45 REMARK 465 ASN A 46 REMARK 465 SER A 47 REMARK 465 SER A 48 REMARK 465 LEU A 49 REMARK 465 LEU A 50 REMARK 465 VAL A 51 REMARK 465 GLY A 52 REMARK 465 GLN A 53 REMARK 465 PRO A 54 REMARK 465 ASP A 55 REMARK 465 VAL A 56 REMARK 465 ILE A 57 REMARK 465 ASP A 58 REMARK 465 ASN A 59 REMARK 465 ASP A 60 REMARK 465 ASN A 61 REMARK 465 VAL A 62 REMARK 465 GLN A 111 REMARK 465 THR A 112 REMARK 465 HIS A 113 REMARK 465 SER A 114 REMARK 465 ASP A 320 REMARK 465 TYR A 321 REMARK 465 ALA A 322 REMARK 465 ARG A 367 REMARK 465 VAL A 368 REMARK 465 ASP A 369 REMARK 465 PRO A 370 REMARK 465 LYS A 492 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 317 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 109 -57.24 -155.34 REMARK 500 THR A 121 -145.09 -115.94 REMARK 500 THR A 123 -51.39 -138.06 REMARK 500 ASN A 156 30.86 -99.61 REMARK 500 TRP A 214 -79.83 -95.91 REMARK 500 PRO A 269 -25.59 -38.87 REMARK 500 ILE A 270 -53.95 64.07 REMARK 500 ASP A 295 -68.06 57.75 REMARK 500 ASN A 303 -37.92 65.56 REMARK 500 THR A 318 -153.85 -78.19 REMARK 500 VAL A 331 98.63 29.38 REMARK 500 HIS A 347 49.34 -155.98 REMARK 500 VAL A 349 140.06 65.61 REMARK 500 MET A 365 35.62 -88.63 REMARK 500 SER A 372 74.02 50.54 REMARK 500 GLN A 373 110.26 63.34 REMARK 500 ILE A 374 69.07 -64.77 REMARK 500 SER A 380 -98.89 54.98 REMARK 500 ALA A 389 -103.14 -86.61 REMARK 500 HIS A 390 -165.18 63.45 REMARK 500 ILE A 395 85.75 56.48 REMARK 500 ASP A 424 -22.64 -140.13 REMARK 500 PRO A 440 48.57 -84.69 REMARK 500 GLU A 465 -92.88 78.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 213 OD1 REMARK 620 2 ASP A 213 OD2 46.9 REMARK 620 3 ASP A 424 OD1 116.5 82.0 REMARK 620 4 HOH A 602 O 101.5 84.0 108.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OFZ RELATED DB: PDB REMARK 900 4OFZ CONTAINS THE SAME PROTEIN IN SAME SPACE GROUP BUT IT CONTAINS REMARK 900 ONLY MG. BUT THIS ENTRY CONTAINS PEG MOLECULE AT THE ACTIVE SITE. DBREF 5E0O A 1 492 UNP A8NS89 GOB1_BRUMA 1 492 SEQADV 5E0O MET A -33 UNP A8NS89 INITIATING METHIONINE SEQADV 5E0O GLY A -32 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -31 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -30 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -29 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -28 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -27 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -26 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -25 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -24 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -23 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -22 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -21 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O LEU A -20 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O VAL A -19 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O PRO A -18 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O ARG A -17 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -16 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -15 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O HIS A -14 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O MET A -13 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O ALA A -12 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A -11 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O MET A -10 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O THR A -9 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -8 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -7 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLN A -6 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLN A -5 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O MET A -4 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -3 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O ARG A -2 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O GLY A -1 UNP A8NS89 EXPRESSION TAG SEQADV 5E0O SER A 0 UNP A8NS89 EXPRESSION TAG SEQRES 1 A 526 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 526 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 526 GLY GLN GLN MET GLY ARG GLY SER MET THR GLU THR VAL SEQRES 4 A 526 THR ASP GLN GLY LYS GLN ARG SER SER LYS LEU GLN LYS SEQRES 5 A 526 ASN GLU ALA ALA LYS ASP GLU GLN VAL GLU GLY LYS GLY SEQRES 6 A 526 LYS GLU THR LEU GLU SER GLY THR ASP LYS SER ALA GLU SEQRES 7 A 526 GLN ASN SER SER LEU LEU VAL GLY GLN PRO ASP VAL ILE SEQRES 8 A 526 ASP ASN ASP ASN VAL GLN THR VAL ASP ASP PHE LYS ASN SEQRES 9 A 526 LEU MET TYR LYS MET GLN GLU THR ARG ARG ALA ILE VAL SEQRES 10 A 526 PHE ALA LEU LEU ASN GLU LYS ASP LEU THR LYS ASP ASP SEQRES 11 A 526 VAL GLU ILE LEU LYS ARG ALA TYR GLU LYS LEU THR ASP SEQRES 12 A 526 ASN GLN THR HIS SER PHE GLN ARG GLU MET CYS THR LEU SEQRES 13 A 526 THR THR LYS LEU SER VAL ASN ILE GLY ASP GLU THR ARG SEQRES 14 A 526 GLY LEU GLU LYS ASP LEU LYS TYR LEU ASP ALA LEU MET SEQRES 15 A 526 ASN ILE ARG ARG GLU GLU PRO ASN LEU LEU TRP PRO ILE SEQRES 16 A 526 ILE MET SER ARG VAL ASP LEU PHE SER ILE LEU ALA ASN SEQRES 17 A 526 TYR HIS PRO LYS GLY LYS GLU THR PHE LEU LYS GLU TYR SEQRES 18 A 526 GLU ASP THR VAL LYS PHE LEU LYS THR PHE ILE SER SER SEQRES 19 A 526 GLU ALA ILE THR GLY LYS LYS PRO ILE PHE ILE THR ASP SEQRES 20 A 526 TRP ASP GLY THR MET LYS ASP TYR CYS SER GLN TYR ALA SEQRES 21 A 526 THR ASN LEU GLN PRO VAL TYR SER ALA VAL GLY MET THR SEQRES 22 A 526 ARG PHE ALA ALA SER PHE THR ARG ILE SER ALA VAL LEU SEQRES 23 A 526 THR ALA GLY PRO LEU ARG GLY PRO GLY ILE LEU ASP LEU SEQRES 24 A 526 THR ALA MET PRO ILE ASP GLY PRO VAL MET PHE SER GLY SEQRES 25 A 526 SER TRP GLY ARG GLU TRP TRP LEU SER GLY LYS ARG VAL SEQRES 26 A 526 VAL HIS GLN ASP GLY ILE THR ASP GLU GLY PHE ASN ALA SEQRES 27 A 526 LEU GLN ARG LEU ASP ASP GLU MET LYS ASP LEU LEU HIS SEQRES 28 A 526 THR SER ASP TYR ALA PRO PHE ALA LEU VAL GLY SER GLY SEQRES 29 A 526 VAL GLN ARG LYS VAL ASP ARG LEU THR LEU GLY VAL GLN SEQRES 30 A 526 THR VAL CYS HIS HIS VAL THR SER GLU LEU SER ASN ARG SEQRES 31 A 526 TYR GLN MET ALA VAL LYS GLU ARG MET HIS ARG VAL ASP SEQRES 32 A 526 PRO ASN SER GLN ILE LEU VAL PHE ASP PRO SER THR GLU SEQRES 33 A 526 LEU GLU VAL GLU VAL VAL ALA HIS ASN SER GLY ILE ILE SEQRES 34 A 526 TRP ASN LYS GLY ASN GLY VAL GLU ARG LEU ILE LYS SER SEQRES 35 A 526 LEU GLY ASP SER LEU GLN SER PRO GLY LYS ILE LEU ILE SEQRES 36 A 526 CYS GLY ASP THR LEU SER ASP ILE PRO MET VAL ARG GLN SEQRES 37 A 526 ALA VAL LYS GLN ASN PRO ASP GLY VAL LEU ALA ILE PHE SEQRES 38 A 526 VAL GLY ALA LYS MET SER LEU ARG GLU GLU VAL LYS GLN SEQRES 39 A 526 VAL ILE GLY ASP GLU SER ARG CYS CYS PHE VAL SER CYS SEQRES 40 A 526 PRO ASP VAL ILE HIS ALA ALA MET SER GLN ILE LEU ASN SEQRES 41 A 526 GLU HIS CYS ILE GLY LYS HET MG A 501 1 HET SO4 A 502 5 HET PEG A 503 7 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 MG MG 2+ FORMUL 3 SO4 O4 S 2- FORMUL 4 PEG C4 H10 O3 FORMUL 5 HOH *47(H2 O) HELIX 1 AA1 THR A 64 ASN A 88 1 25 HELIX 2 AA2 THR A 93 LEU A 107 1 15 HELIX 3 AA3 ILE A 130 GLU A 154 1 25 HELIX 4 AA4 LEU A 158 ARG A 165 1 8 HELIX 5 AA5 ASP A 167 ALA A 173 1 7 HELIX 6 AA6 ASN A 174 HIS A 176 5 3 HELIX 7 AA7 GLY A 179 SER A 199 1 21 HELIX 8 AA8 SER A 199 GLY A 205 1 7 HELIX 9 AA9 GLN A 224 ASN A 228 5 5 HELIX 10 AB1 PRO A 231 THR A 246 1 16 HELIX 11 AB2 GLY A 261 THR A 266 1 6 HELIX 12 AB3 ASN A 303 THR A 318 1 16 HELIX 13 AB4 THR A 350 ARG A 364 1 15 HELIX 14 AB5 ASN A 397 GLY A 410 1 14 HELIX 15 AB6 THR A 425 SER A 427 5 3 HELIX 16 AB7 ASP A 428 ASN A 439 1 12 HELIX 17 AB8 LYS A 451 ILE A 462 1 12 HELIX 18 AB9 CYS A 473 CYS A 489 1 17 SHEET 1 AA1 2 ARG A 117 CYS A 120 0 SHEET 2 AA1 2 LYS A 125 VAL A 128 -1 O LEU A 126 N MET A 119 SHEET 1 AA2 8 ARG A 290 VAL A 292 0 SHEET 2 AA2 8 GLU A 283 TRP A 285 -1 N TRP A 284 O VAL A 291 SHEET 3 AA2 8 VAL A 274 GLY A 278 -1 N GLY A 278 O GLU A 283 SHEET 4 AA2 8 ILE A 248 LEU A 252 1 N SER A 249 O MET A 275 SHEET 5 AA2 8 ILE A 209 ASP A 213 1 N PHE A 210 O ILE A 248 SHEET 6 AA2 8 ILE A 419 GLY A 423 1 O LEU A 420 N ILE A 211 SHEET 7 AA2 8 VAL A 443 VAL A 448 1 O LEU A 444 N ILE A 419 SHEET 8 AA2 8 CYS A 468 VAL A 471 1 O CYS A 469 N ALA A 445 SHEET 1 AA3 4 GLN A 332 LYS A 334 0 SHEET 2 AA3 4 ARG A 337 GLY A 341 -1 O THR A 339 N GLN A 332 SHEET 3 AA3 4 GLU A 384 VAL A 388 -1 O VAL A 385 N LEU A 340 SHEET 4 AA3 4 VAL A 376 ASP A 378 -1 N VAL A 376 O VAL A 388 SSBOND 1 CYS A 346 CYS A 346 1555 10555 2.03 LINK OD1 ASP A 213 MG MG A 501 1555 1555 2.98 LINK OD2 ASP A 213 MG MG A 501 1555 1555 2.31 LINK OD1 ASP A 424 MG MG A 501 1555 1555 2.10 LINK MG MG A 501 O HOH A 602 1555 1555 2.03 CISPEP 1 GLY A 259 PRO A 260 0 -9.88 CISPEP 2 LEU A 286 SER A 287 0 -1.65 CISPEP 3 VAL A 345 CYS A 346 0 4.67 CISPEP 4 ASN A 371 SER A 372 0 2.07 CISPEP 5 SER A 372 GLN A 373 0 18.50 CISPEP 6 HIS A 390 ASN A 391 0 13.08 CISPEP 7 ASP A 441 GLY A 442 0 -0.06 CISPEP 8 ASP A 464 GLU A 465 0 14.33 SITE 1 AC1 7 ASP A 213 ASP A 215 ASP A 424 THR A 425 SITE 2 AC1 7 ASP A 428 PEG A 503 HOH A 602 SITE 1 AC2 7 THR A 425 LEU A 426 SER A 427 LYS A 451 SITE 2 AC2 7 SER A 453 PEG A 503 HOH A 618 SITE 1 AC3 11 ASP A 213 TRP A 214 ASP A 215 ALA A 254 SITE 2 AC3 11 TRP A 280 LYS A 398 THR A 425 SER A 427 SITE 3 AC3 11 MG A 501 SO4 A 502 HOH A 602 CRYST1 167.931 167.931 102.956 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005955 0.003438 0.000000 0.00000 SCALE2 0.000000 0.006876 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009713 0.00000