HEADER DNA BINDING PROTEIN 29-SEP-15 5E0T TITLE HUMAN PCNA MUTANT - S228I COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PCNA,CYCLIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: S228I; SOURCE 6 GENE: PCNA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BLR (DE3) KEYWDS DNA REPLICATION, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.M.DUFFY,B.J.HILBERT,B.A.KELCH REVDAT 3 27-SEP-23 5E0T 1 REMARK REVDAT 2 22-NOV-17 5E0T 1 JRNL REMARK REVDAT 1 20-APR-16 5E0T 0 JRNL AUTH C.M.DUFFY,B.J.HILBERT,B.A.KELCH JRNL TITL A DISEASE-CAUSING VARIANT IN PCNA DISRUPTS A PROMISCUOUS JRNL TITL 2 PROTEIN BINDING SITE. JRNL REF J.MOL.BIOL. V. 428 1023 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 26688547 JRNL DOI 10.1016/J.JMB.2015.11.029 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 53652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2143 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8599 - 6.5658 1.00 3679 155 0.2020 0.2061 REMARK 3 2 6.5658 - 5.2144 1.00 3514 146 0.2026 0.2466 REMARK 3 3 5.2144 - 4.5561 1.00 3493 145 0.1489 0.1892 REMARK 3 4 4.5561 - 4.1399 1.00 3456 143 0.1485 0.1901 REMARK 3 5 4.1399 - 3.8434 1.00 3451 144 0.1677 0.1931 REMARK 3 6 3.8434 - 3.6169 1.00 3426 142 0.1757 0.2316 REMARK 3 7 3.6169 - 3.4359 1.00 3420 143 0.1781 0.1966 REMARK 3 8 3.4359 - 3.2864 1.00 3413 142 0.1953 0.2198 REMARK 3 9 3.2864 - 3.1599 1.00 3410 141 0.2085 0.2545 REMARK 3 10 3.1599 - 3.0509 1.00 3394 142 0.2128 0.2813 REMARK 3 11 3.0509 - 2.9555 1.00 3395 140 0.2187 0.2710 REMARK 3 12 2.9555 - 2.8711 1.00 3405 142 0.2301 0.2782 REMARK 3 13 2.8711 - 2.7955 1.00 3374 141 0.2408 0.3223 REMARK 3 14 2.7955 - 2.7273 1.00 3390 140 0.2472 0.2986 REMARK 3 15 2.7273 - 2.6653 0.98 3289 137 0.2575 0.2990 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 5879 REMARK 3 ANGLE : 1.629 7939 REMARK 3 CHIRALITY : 0.065 942 REMARK 3 PLANARITY : 0.007 1016 REMARK 3 DIHEDRAL : 16.203 2199 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E0T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000214142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53711 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.665 REMARK 200 RESOLUTION RANGE LOW (A) : 42.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.85100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.280 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, PHASER REMARK 200 STARTING MODEL: 1VYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE, PH4.5, 2M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.91850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 81.16200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 81.16200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.87775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 81.16200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 81.16200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.95925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 81.16200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.16200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 104.87775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 81.16200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.16200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.95925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.91850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 186 REMARK 465 ASN A 187 REMARK 465 VAL A 188 REMARK 465 ASP A 189 REMARK 465 LYS A 190 REMARK 465 GLU A 191 REMARK 465 GLU A 192 REMARK 465 GLU A 256 REMARK 465 ASP A 257 REMARK 465 GLU A 258 REMARK 465 GLU A 259 REMARK 465 GLY A 260 REMARK 465 SER A 261 REMARK 465 SER B 186 REMARK 465 ASN B 187 REMARK 465 VAL B 188 REMARK 465 ASP B 189 REMARK 465 LYS B 190 REMARK 465 GLU B 191 REMARK 465 GLY B 260 REMARK 465 SER B 261 REMARK 465 ASN C 187 REMARK 465 VAL C 188 REMARK 465 ASP C 189 REMARK 465 LYS C 190 REMARK 465 ASP C 257 REMARK 465 GLU C 258 REMARK 465 GLU C 259 REMARK 465 GLY C 260 REMARK 465 SER C 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 302 O HOH B 303 2.03 REMARK 500 O HOH A 364 O HOH A 370 2.07 REMARK 500 OE2 GLU A 3 NH1 ARG A 91 2.08 REMARK 500 O LYS C 164 O HOH C 301 2.13 REMARK 500 O HOH A 339 O HOH A 352 2.17 REMARK 500 N VAL B 45 O HOH B 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 198 OE2 GLU B 198 8555 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 16 CA - CB - CG ANGL. DEV. = -20.4 DEGREES REMARK 500 LEU B 16 CA - CB - CG ANGL. DEV. = -19.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 124 -178.14 -68.88 REMARK 500 ASP A 165 -73.62 -38.65 REMARK 500 ALA A 242 -125.22 45.08 REMARK 500 ASP B 165 46.80 35.73 REMARK 500 ALA B 242 -128.83 44.52 REMARK 500 ILE B 255 -88.67 -81.95 REMARK 500 GLU B 256 165.30 160.86 REMARK 500 ALA C 242 -127.08 42.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 124 GLN A 125 147.13 REMARK 500 ASN B 107 GLN B 108 -142.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VYM RELATED DB: PDB REMARK 900 RELATED ID: 5E0V RELATED DB: PDB REMARK 900 RELATED ID: 5E0U RELATED DB: PDB DBREF 5E0T A 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 5E0T B 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 5E0T C 1 261 UNP P12004 PCNA_HUMAN 1 261 SEQADV 5E0T ILE A 228 UNP P12004 SER 228 ENGINEERED MUTATION SEQADV 5E0T ILE B 228 UNP P12004 SER 228 ENGINEERED MUTATION SEQADV 5E0T ILE C 228 UNP P12004 SER 228 ENGINEERED MUTATION SEQRES 1 A 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 A 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 A 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 A 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 A 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 A 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 A 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 A 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 A 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 A 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 A 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 A 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 A 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 A 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 A 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 A 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 A 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 A 261 SER SER THR VAL THR LEU ILE MET SER ALA ASP VAL PRO SEQRES 19 A 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 A 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 A 261 SER SEQRES 1 B 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 B 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 B 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 B 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 B 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 B 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 B 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 B 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 B 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 B 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 B 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 B 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 B 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 B 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 B 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 B 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 B 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 B 261 SER SER THR VAL THR LEU ILE MET SER ALA ASP VAL PRO SEQRES 19 B 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 B 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 B 261 SER SEQRES 1 C 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 C 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 C 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 C 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 C 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 C 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 C 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 C 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 C 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 C 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 C 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 C 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 C 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 C 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 C 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 C 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 C 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 C 261 SER SER THR VAL THR LEU ILE MET SER ALA ASP VAL PRO SEQRES 19 C 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 C 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 C 261 SER FORMUL 4 HOH *236(H2 O) HELIX 1 AA1 GLY A 9 LYS A 20 1 12 HELIX 2 AA2 GLU A 55 PHE A 57 5 3 HELIX 3 AA3 LEU A 72 LYS A 80 1 9 HELIX 4 AA4 SER A 141 GLY A 155 1 15 HELIX 5 AA5 LEU A 209 THR A 216 1 8 HELIX 6 AA6 LYS A 217 SER A 222 5 6 HELIX 7 AA7 GLY B 9 ASP B 21 1 13 HELIX 8 AA8 GLU B 55 PHE B 57 5 3 HELIX 9 AA9 LEU B 72 CYS B 81 1 10 HELIX 10 AB1 SER B 141 GLY B 155 1 15 HELIX 11 AB2 LEU B 209 THR B 216 1 8 HELIX 12 AB3 LYS B 217 SER B 222 5 6 HELIX 13 AB4 GLY C 9 ASP C 21 1 13 HELIX 14 AB5 GLU C 55 PHE C 57 5 3 HELIX 15 AB6 LEU C 72 CYS C 81 1 10 HELIX 16 AB7 SER C 141 SER C 152 1 12 HELIX 17 AB8 LEU C 209 THR C 216 1 8 HELIX 18 AB9 LYS C 217 SER C 222 5 6 SHEET 1 AA1 9 THR A 59 CYS A 62 0 SHEET 2 AA1 9 PHE A 2 LEU A 6 -1 N ARG A 5 O THR A 59 SHEET 3 AA1 9 ILE A 87 ALA A 92 -1 O ILE A 88 N LEU A 6 SHEET 4 AA1 9 THR A 98 GLU A 104 -1 O ALA A 100 N ARG A 91 SHEET 5 AA1 9 LYS A 110 LYS A 117 -1 O MET A 116 N LEU A 99 SHEET 6 AA1 9 GLY B 176 SER B 183 -1 O ASN B 177 N GLU A 115 SHEET 7 AA1 9 GLY B 166 GLY B 173 -1 N VAL B 167 O LEU B 182 SHEET 8 AA1 9 ALA B 157 ALA B 163 -1 N VAL B 159 O SER B 170 SHEET 9 AA1 9 VAL B 203 ALA B 208 -1 O VAL B 203 N CYS B 162 SHEET 1 AA2 9 LEU A 66 ASN A 71 0 SHEET 2 AA2 9 GLU A 25 ILE A 30 -1 N TRP A 28 O MET A 68 SHEET 3 AA2 9 GLY A 34 MET A 40 -1 O ASN A 36 N ASP A 29 SHEET 4 AA2 9 SER A 46 ARG A 53 -1 O LEU A 52 N VAL A 35 SHEET 5 AA2 9 GLY A 245 LEU A 251 -1 O TYR A 250 N LEU A 47 SHEET 6 AA2 9 LEU A 235 ILE A 241 -1 N ILE A 241 O GLY A 245 SHEET 7 AA2 9 THR A 224 MET A 229 -1 N THR A 226 O GLU A 238 SHEET 8 AA2 9 CYS A 135 PRO A 140 -1 N VAL A 137 O LEU A 227 SHEET 9 AA2 9 THR A 196 MET A 199 -1 O GLU A 198 N VAL A 136 SHEET 1 AA3 9 VAL A 203 ALA A 208 0 SHEET 2 AA3 9 ALA A 157 CYS A 162 -1 N ILE A 160 O LEU A 205 SHEET 3 AA3 9 VAL A 167 GLY A 173 -1 O SER A 170 N VAL A 159 SHEET 4 AA3 9 GLY A 176 LEU A 182 -1 O LEU A 182 N VAL A 167 SHEET 5 AA3 9 LYS C 110 LYS C 117 -1 O GLU C 115 N ASN A 177 SHEET 6 AA3 9 THR C 98 GLU C 104 -1 N LEU C 99 O MET C 116 SHEET 7 AA3 9 ILE C 87 ALA C 92 -1 N ARG C 91 O ALA C 100 SHEET 8 AA3 9 PHE C 2 LEU C 6 -1 N LEU C 6 O ILE C 88 SHEET 9 AA3 9 THR C 59 CYS C 62 -1 O ARG C 61 N GLU C 3 SHEET 1 AA4 9 THR B 59 CYS B 62 0 SHEET 2 AA4 9 PHE B 2 LEU B 6 -1 N GLU B 3 O ARG B 61 SHEET 3 AA4 9 ILE B 87 ALA B 92 -1 O ILE B 88 N LEU B 6 SHEET 4 AA4 9 THR B 98 GLU B 104 -1 O ALA B 100 N ARG B 91 SHEET 5 AA4 9 LYS B 110 LYS B 117 -1 O TYR B 114 N LEU B 101 SHEET 6 AA4 9 GLY C 176 SER C 183 -1 O ASN C 177 N GLU B 115 SHEET 7 AA4 9 GLY C 166 GLY C 173 -1 N VAL C 167 O LEU C 182 SHEET 8 AA4 9 ALA C 157 CYS C 162 -1 N VAL C 159 O SER C 170 SHEET 9 AA4 9 VAL C 203 ALA C 208 -1 O LEU C 205 N ILE C 160 SHEET 1 AA5 9 LEU B 66 ASN B 71 0 SHEET 2 AA5 9 GLU B 25 SER B 31 -1 N TRP B 28 O MET B 68 SHEET 3 AA5 9 GLY B 34 MET B 40 -1 O ASN B 36 N ASP B 29 SHEET 4 AA5 9 SER B 46 ARG B 53 -1 O LEU B 52 N VAL B 35 SHEET 5 AA5 9 GLY B 245 LEU B 251 -1 O LYS B 248 N GLN B 49 SHEET 6 AA5 9 LEU B 235 ILE B 241 -1 N ILE B 241 O GLY B 245 SHEET 7 AA5 9 THR B 224 MET B 229 -1 N ILE B 228 O VAL B 236 SHEET 8 AA5 9 CYS B 135 PRO B 140 -1 N VAL B 137 O LEU B 227 SHEET 9 AA5 9 THR B 196 MET B 199 -1 O GLU B 198 N VAL B 136 SHEET 1 AA6 9 LEU C 66 ASN C 71 0 SHEET 2 AA6 9 GLU C 25 SER C 31 -1 N ILE C 30 O LEU C 66 SHEET 3 AA6 9 GLY C 34 MET C 40 -1 O ASN C 36 N ASP C 29 SHEET 4 AA6 9 LEU C 47 ARG C 53 -1 O VAL C 48 N SER C 39 SHEET 5 AA6 9 GLY C 245 LEU C 251 -1 O LYS C 248 N GLN C 49 SHEET 6 AA6 9 LEU C 235 ILE C 241 -1 N ILE C 241 O GLY C 245 SHEET 7 AA6 9 THR C 224 MET C 229 -1 N ILE C 228 O VAL C 236 SHEET 8 AA6 9 CYS C 135 PRO C 140 -1 N VAL C 137 O LEU C 227 SHEET 9 AA6 9 THR C 196 MET C 199 -1 O GLU C 198 N VAL C 136 CRYST1 162.324 162.324 139.837 90.00 90.00 90.00 P 43 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006161 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007151 0.00000