HEADER TOXIN/IMMUNE SYSTEM 29-SEP-15 5E1H TITLE RICIN TOXIN IN COMPLEX WITH NEUTRALIZING SINGLE CHAIN MONOCLONAL TITLE 2 ANTIBODIES (VHHS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.2.22; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: F8(JOB10) VHH ANTIBODY; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_COMMON: ALPACA; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RICIN TOXIN, VHHS, TOXIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH,D.VANCE,C.SHOEMAKER,N.MANTIS REVDAT 5 06-MAR-24 5E1H 1 REMARK REVDAT 4 11-DEC-19 5E1H 1 REMARK REVDAT 3 13-SEP-17 5E1H 1 REMARK REVDAT 2 12-APR-17 5E1H 1 COMPND SOURCE JRNL REVDAT 1 03-AUG-16 5E1H 0 JRNL AUTH M.J.RUDOLPH,D.J.VANCE,M.S.CASSIDY,Y.RONG,C.B.SHOEMAKER, JRNL AUTH 2 N.J.MANTIS JRNL TITL STRUCTURAL ANALYSIS OF NESTED NEUTRALIZING AND JRNL TITL 2 NON-NEUTRALIZING B CELL EPITOPES ON RICIN TOXIN'S ENZYMATIC JRNL TITL 3 SUBUNIT. JRNL REF PROTEINS V. 84 1162 2016 JRNL REFN ESSN 1097-0134 JRNL PMID 27159829 JRNL DOI 10.1002/PROT.25062 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.J.RUDOLPH,N.MANTIS REMARK 1 TITL CRYSTAL STRUCTURES OF RICIN TOXIN'S ENZYMATIC SUBUNIT (RTA) REMARK 1 TITL 2 IN COMPLEX WITH NEUTRALIZING AND NON-NEUTRALIZING REMARK 1 TITL 3 SINGLE-CHAIN ANTIBODIES REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 24964 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.1185 - 4.2196 0.94 2775 121 0.1575 0.1951 REMARK 3 2 4.2196 - 3.3536 0.95 2681 129 0.1627 0.2240 REMARK 3 3 3.3536 - 2.9309 0.94 2639 152 0.2042 0.2623 REMARK 3 4 2.9309 - 2.6635 0.94 2616 139 0.2269 0.2988 REMARK 3 5 2.6635 - 2.4729 0.94 2626 149 0.2443 0.2915 REMARK 3 6 2.4729 - 2.3273 0.96 2660 101 0.2532 0.3221 REMARK 3 7 2.3273 - 2.2109 0.93 2562 132 0.2736 0.2914 REMARK 3 8 2.2109 - 2.1147 0.93 2593 150 0.2788 0.3186 REMARK 3 9 2.1147 - 2.0334 0.92 2533 157 0.3050 0.3422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 41.54 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.71950 REMARK 3 B22 (A**2) : 3.76980 REMARK 3 B33 (A**2) : -13.48930 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.0400 REMARK 3 OPERATOR: -K,-H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3047 REMARK 3 ANGLE : 1.048 4143 REMARK 3 CHIRALITY : 0.073 462 REMARK 3 PLANARITY : 0.004 541 REMARK 3 DIHEDRAL : 13.487 1087 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:56) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2358 35.7413 69.4247 REMARK 3 T TENSOR REMARK 3 T11: 0.3922 T22: 0.3520 REMARK 3 T33: 0.2992 T12: 0.1881 REMARK 3 T13: 0.0692 T23: 0.0691 REMARK 3 L TENSOR REMARK 3 L11: 1.3436 L22: 3.1518 REMARK 3 L33: 4.7659 L12: 0.0466 REMARK 3 L13: 1.4227 L23: 0.4894 REMARK 3 S TENSOR REMARK 3 S11: 0.0567 S12: 0.3974 S13: -0.1792 REMARK 3 S21: -0.5300 S22: -0.1026 S23: -0.2436 REMARK 3 S31: 0.4916 S32: 1.1219 S33: 0.1174 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 57:122) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4147 30.4336 83.2551 REMARK 3 T TENSOR REMARK 3 T11: 0.2884 T22: 0.1902 REMARK 3 T33: 0.2133 T12: 0.0453 REMARK 3 T13: 0.0254 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 3.2571 L22: 6.2737 REMARK 3 L33: 7.0994 L12: -0.2519 REMARK 3 L13: -1.0862 L23: -2.3355 REMARK 3 S TENSOR REMARK 3 S11: 0.2338 S12: -0.1111 S13: -0.3010 REMARK 3 S21: -0.2332 S22: -0.2530 S23: -0.0740 REMARK 3 S31: 1.0018 S32: 0.0496 S33: 0.0115 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 123:262) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5995 45.8594 72.3286 REMARK 3 T TENSOR REMARK 3 T11: 0.2744 T22: 0.2049 REMARK 3 T33: 0.2467 T12: 0.1274 REMARK 3 T13: 0.0075 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.2128 L22: 1.6949 REMARK 3 L33: 6.8715 L12: 0.3119 REMARK 3 L13: 0.9805 L23: -1.4524 REMARK 3 S TENSOR REMARK 3 S11: -0.1653 S12: -0.0883 S13: 0.1945 REMARK 3 S21: 0.1213 S22: 0.1319 S23: 0.1861 REMARK 3 S31: -0.7726 S32: -0.5948 S33: 0.0314 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:17) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8515 15.1450 106.1133 REMARK 3 T TENSOR REMARK 3 T11: 0.5510 T22: 0.6480 REMARK 3 T33: 0.3406 T12: -0.1273 REMARK 3 T13: -0.0343 T23: 0.1376 REMARK 3 L TENSOR REMARK 3 L11: 5.3077 L22: 2.6623 REMARK 3 L33: 4.4194 L12: 1.4158 REMARK 3 L13: -0.9475 L23: 0.5034 REMARK 3 S TENSOR REMARK 3 S11: -0.2097 S12: 0.3613 S13: 0.1363 REMARK 3 S21: -1.2435 S22: -0.4885 S23: -0.7192 REMARK 3 S31: -0.0742 S32: -0.1261 S33: 0.6577 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 18:25) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4751 18.2040 99.5701 REMARK 3 T TENSOR REMARK 3 T11: 0.3090 T22: 0.4727 REMARK 3 T33: 0.4908 T12: -0.0891 REMARK 3 T13: -0.0736 T23: 0.0951 REMARK 3 L TENSOR REMARK 3 L11: 2.0213 L22: 2.0042 REMARK 3 L33: 8.9601 L12: 0.9980 REMARK 3 L13: -1.0033 L23: -5.0263 REMARK 3 S TENSOR REMARK 3 S11: -0.0057 S12: -0.0092 S13: 0.2628 REMARK 3 S21: -0.5029 S22: 0.5056 S23: 0.8440 REMARK 3 S31: -0.2035 S32: -0.2821 S33: -0.5251 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 26:39) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5640 23.4663 96.9335 REMARK 3 T TENSOR REMARK 3 T11: 0.2130 T22: 0.4070 REMARK 3 T33: 0.3587 T12: -0.0711 REMARK 3 T13: 0.0570 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 9.2777 L22: 8.5299 REMARK 3 L33: 8.2757 L12: 2.4771 REMARK 3 L13: -1.5334 L23: -3.7425 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: -0.1800 S13: 0.5570 REMARK 3 S21: -0.1695 S22: 0.0507 S23: 0.3811 REMARK 3 S31: -0.5012 S32: -0.2294 S33: -0.1238 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 40:51) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0870 18.4920 105.6528 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.5436 REMARK 3 T33: 0.3539 T12: -0.0919 REMARK 3 T13: 0.0223 T23: 0.1052 REMARK 3 L TENSOR REMARK 3 L11: 1.8467 L22: 0.2286 REMARK 3 L33: 1.9999 L12: -0.6413 REMARK 3 L13: 4.4805 L23: -1.5574 REMARK 3 S TENSOR REMARK 3 S11: 0.1532 S12: -0.4076 S13: 0.1747 REMARK 3 S21: 0.3650 S22: -0.1957 S23: -0.2706 REMARK 3 S31: -0.4783 S32: 0.1130 S33: 0.0988 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 52:67) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0570 13.2223 94.6696 REMARK 3 T TENSOR REMARK 3 T11: 0.4499 T22: 0.4935 REMARK 3 T33: 0.4679 T12: 0.1352 REMARK 3 T13: 0.1387 T23: 0.1003 REMARK 3 L TENSOR REMARK 3 L11: 6.3830 L22: 7.6674 REMARK 3 L33: 2.0115 L12: 1.1784 REMARK 3 L13: 0.6422 L23: -1.1154 REMARK 3 S TENSOR REMARK 3 S11: -0.2861 S12: -0.0551 S13: -1.0729 REMARK 3 S21: -0.8670 S22: -0.1272 S23: -0.6736 REMARK 3 S31: 0.7159 S32: 1.4995 S33: 0.4201 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 68:76) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6960 16.0816 92.8124 REMARK 3 T TENSOR REMARK 3 T11: 0.5008 T22: 0.4836 REMARK 3 T33: 0.3512 T12: -0.2050 REMARK 3 T13: -0.0132 T23: 0.0798 REMARK 3 L TENSOR REMARK 3 L11: 5.0878 L22: 8.8332 REMARK 3 L33: 9.7679 L12: -0.4685 REMARK 3 L13: -0.4594 L23: -4.8334 REMARK 3 S TENSOR REMARK 3 S11: -0.0856 S12: 0.2114 S13: -0.5609 REMARK 3 S21: -1.0328 S22: 0.5914 S23: 0.6038 REMARK 3 S31: 0.8978 S32: -0.9362 S33: -0.4646 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 77:83) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9980 15.4232 97.2903 REMARK 3 T TENSOR REMARK 3 T11: 0.3699 T22: 0.4991 REMARK 3 T33: 0.4356 T12: -0.2252 REMARK 3 T13: -0.0255 T23: 0.1347 REMARK 3 L TENSOR REMARK 3 L11: 3.2934 L22: 9.8786 REMARK 3 L33: 6.1229 L12: 1.1626 REMARK 3 L13: -2.9742 L23: -3.4761 REMARK 3 S TENSOR REMARK 3 S11: -0.2085 S12: 0.0563 S13: -0.4095 REMARK 3 S21: -0.5254 S22: 0.4341 S23: 0.7982 REMARK 3 S31: 0.7815 S32: -0.7881 S33: -0.2899 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 84:99) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6416 13.7418 107.6655 REMARK 3 T TENSOR REMARK 3 T11: 0.3282 T22: 0.6085 REMARK 3 T33: 0.4068 T12: -0.1400 REMARK 3 T13: -0.0117 T23: 0.1603 REMARK 3 L TENSOR REMARK 3 L11: 3.0700 L22: 6.1833 REMARK 3 L33: 7.5757 L12: 2.9046 REMARK 3 L13: -3.3021 L23: -2.8805 REMARK 3 S TENSOR REMARK 3 S11: 0.2842 S12: -0.8743 S13: -0.5761 REMARK 3 S21: 0.4402 S22: -0.7692 S23: -0.5929 REMARK 3 S31: 0.2393 S32: 0.7729 S33: 0.4065 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 100:122) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1077 26.0939 97.7958 REMARK 3 T TENSOR REMARK 3 T11: 0.3952 T22: 0.4195 REMARK 3 T33: 0.2872 T12: -0.1166 REMARK 3 T13: 0.0371 T23: 0.0953 REMARK 3 L TENSOR REMARK 3 L11: 6.5001 L22: 6.3482 REMARK 3 L33: 5.1661 L12: 0.1007 REMARK 3 L13: -0.7583 L23: -1.1691 REMARK 3 S TENSOR REMARK 3 S11: 0.1878 S12: -0.6781 S13: -0.0551 REMARK 3 S21: 0.2875 S22: -0.2339 S23: -0.1325 REMARK 3 S31: -0.4083 S32: 0.2160 S33: 0.0323 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 123:129) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4739 11.2282 113.9298 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.8382 REMARK 3 T33: 0.4689 T12: -0.3226 REMARK 3 T13: -0.0376 T23: 0.2017 REMARK 3 L TENSOR REMARK 3 L11: 7.2906 L22: 3.0386 REMARK 3 L33: 4.0220 L12: -1.0035 REMARK 3 L13: 1.0115 L23: -0.3231 REMARK 3 S TENSOR REMARK 3 S11: 0.1950 S12: -0.9493 S13: -0.7358 REMARK 3 S21: 0.6374 S22: -0.3119 S23: 0.0480 REMARK 3 S31: 0.3091 S32: 0.0670 S33: 0.0306 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E1H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000214180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24972 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.97800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BISTRIS PH 5.5, 25% PEG 3000, REMARK 280 260 MM NACL, AND 10 MM TRIS (2CARBOXYETHYL)PHOSPHINE REMARK 280 HYDROCHLORIDE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.57150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.57150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.23600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.88750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.23600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.88750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.57150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.23600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.88750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.57150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.23600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.88750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 483 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 485 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 41 REMARK 465 GLY B 42 REMARK 465 GLU B 44 REMARK 465 ASP B 62 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 210 O HOH B 226 1.98 REMARK 500 NH2 ARG B 67 OD2 ASP B 90 2.09 REMARK 500 O ASN A 54 O HOH A 401 2.12 REMARK 500 N GLN B 3 O SER B 25 2.12 REMARK 500 O THR B 27 O HOH B 201 2.13 REMARK 500 N VAL B 2 O HOH B 202 2.15 REMARK 500 NH2 ARG A 48 OD1 ASP A 100 2.16 REMARK 500 O HOH B 233 O HOH B 237 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER B 129 OG SER B 129 3557 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 41 -3.83 76.82 REMARK 500 GLN A 223 -3.35 73.63 REMARK 500 CYS A 259 165.45 175.73 REMARK 500 GLN B 13 -80.16 -93.37 REMARK 500 SER B 25 170.75 174.92 REMARK 500 VAL B 48 -66.90 -107.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 DBREF 5E1H A 5 262 UNP P02879 RICI_RICCO 40 297 DBREF 5E1H B 2 129 PDB 5E1H 5E1H 2 129 SEQRES 1 A 258 GLN TYR PRO ILE ILE ASN PHE THR THR ALA GLY ALA THR SEQRES 2 A 258 VAL GLN SER TYR THR ASN PHE ILE ARG ALA VAL ARG GLY SEQRES 3 A 258 ARG LEU THR THR GLY ALA ASP VAL ARG HIS GLU ILE PRO SEQRES 4 A 258 VAL LEU PRO ASN ARG VAL GLY LEU PRO ILE ASN GLN ARG SEQRES 5 A 258 PHE ILE LEU VAL GLU LEU SER ASN HIS ALA GLU LEU SER SEQRES 6 A 258 VAL THR LEU ALA LEU ASP VAL THR ASN ALA TYR VAL VAL SEQRES 7 A 258 GLY TYR ARG ALA GLY ASN SER ALA TYR PHE PHE HIS PRO SEQRES 8 A 258 ASP ASN GLN GLU ASP ALA GLU ALA ILE THR HIS LEU PHE SEQRES 9 A 258 THR ASP VAL GLN ASN ARG TYR THR PHE ALA PHE GLY GLY SEQRES 10 A 258 ASN TYR ASP ARG LEU GLU GLN LEU ALA GLY ASN LEU ARG SEQRES 11 A 258 GLU ASN ILE GLU LEU GLY ASN GLY PRO LEU GLU GLU ALA SEQRES 12 A 258 ILE SER ALA LEU TYR TYR TYR SER THR GLY GLY THR GLN SEQRES 13 A 258 LEU PRO THR LEU ALA ARG SER PHE ILE ILE CYS ILE GLN SEQRES 14 A 258 MET ILE SER GLU ALA ALA ARG PHE GLN TYR ILE GLU GLY SEQRES 15 A 258 GLU MET ARG THR ARG ILE ARG TYR ASN ARG ARG SER ALA SEQRES 16 A 258 PRO ASP PRO SER VAL ILE THR LEU GLU ASN SER TRP GLY SEQRES 17 A 258 ARG LEU SER THR ALA ILE GLN GLU SER ASN GLN GLY ALA SEQRES 18 A 258 PHE ALA SER PRO ILE GLN LEU GLN ARG ARG ASN GLY SER SEQRES 19 A 258 LYS PHE SER VAL TYR ASP VAL SER ILE LEU ILE PRO ILE SEQRES 20 A 258 ILE ALA LEU MET VAL TYR ARG CYS ALA PRO PRO SEQRES 1 B 128 VAL GLN LEU ALA GLU THR GLY GLY GLY LEU VAL GLN ALA SEQRES 2 B 128 GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY THR SEQRES 3 B 128 THR PHE SER LYS ASN ALA MET ALA TRP PHE ARG GLN ALA SEQRES 4 B 128 PRO GLY LYS GLU ARG GLU PHE VAL ALA GLY ILE ASN TRP SEQRES 5 B 128 ASN ALA VAL SER THR ASN TYR ALA ASP SER VAL LYS GLY SEQRES 6 B 128 ARG PHE THR VAL SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 B 128 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 B 128 VAL TYR TYR CYS ALA GLY SER SER ILE TYR SER ASP ILE SEQRES 9 B 128 SER GLY ALA ALA THR VAL TRP ALA THR SER TYR ASN TYR SEQRES 10 B 128 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 3(CL 1-) FORMUL 6 HOH *122(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 ILE A 104 1 8 HELIX 4 AA4 THR A 105 LEU A 107 5 3 HELIX 5 AA5 ASN A 122 GLY A 131 1 10 HELIX 6 AA6 LEU A 133 ILE A 137 5 5 HELIX 7 AA7 GLY A 140 GLY A 157 1 18 HELIX 8 AA8 GLN A 160 PHE A 181 1 22 HELIX 9 AA9 PHE A 181 TYR A 194 1 14 HELIX 10 AB1 ASP A 201 SER A 221 1 21 HELIX 11 AB2 SER A 246 ILE A 249 5 4 HELIX 12 AB3 ASN B 74 LYS B 76 5 3 HELIX 13 AB4 LYS B 87 THR B 91 5 5 HELIX 14 AB5 ALA B 109 TYR B 116 5 8 SHEET 1 AA1 7 ILE A 8 THR A 12 0 SHEET 2 AA1 7 PHE A 57 SER A 63 1 O GLU A 61 N PHE A 11 SHEET 3 AA1 7 SER A 69 ASP A 75 -1 O LEU A 72 N VAL A 60 SHEET 4 AA1 7 VAL A 81 ALA A 86 -1 O VAL A 82 N ALA A 73 SHEET 5 AA1 7 SER A 89 PHE A 92 -1 O TYR A 91 N TYR A 84 SHEET 6 AA1 7 ASN A 113 PHE A 117 1 O PHE A 117 N PHE A 92 SHEET 7 AA1 7 TYR B 102 GLY B 107 -1 O SER B 106 N ARG A 114 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O PHE A 240 N LEU A 232 SHEET 1 AA4 4 GLN B 3 THR B 7 0 SHEET 2 AA4 4 LEU B 18 SER B 25 -1 O SER B 25 N GLN B 3 SHEET 3 AA4 4 THR B 78 MET B 83 -1 O LEU B 81 N LEU B 20 SHEET 4 AA4 4 PHE B 68 ASP B 73 -1 N SER B 71 O TYR B 80 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 123 VAL B 127 1 O GLN B 124 N GLY B 10 SHEET 3 AA5 6 ALA B 92 SER B 99 -1 N ALA B 92 O VAL B 125 SHEET 4 AA5 6 ALA B 33 GLN B 39 -1 N ALA B 35 O ALA B 97 SHEET 5 AA5 6 GLU B 46 ILE B 51 -1 O ALA B 49 N TRP B 36 SHEET 6 AA5 6 THR B 58 TYR B 60 -1 O ASN B 59 N GLY B 50 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 123 VAL B 127 1 O GLN B 124 N GLY B 10 SHEET 3 AA6 4 ALA B 92 SER B 99 -1 N ALA B 92 O VAL B 125 SHEET 4 AA6 4 TYR B 118 TRP B 119 -1 O TYR B 118 N GLY B 98 CISPEP 1 SER B 25 GLY B 26 0 -29.72 SITE 1 AC1 3 GLY A 158 HOH A 428 HOH A 442 SITE 1 AC2 2 HIS A 40 SER A 221 CRYST1 88.472 91.775 95.143 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011303 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010896 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010510 0.00000