HEADER CELL ADHESION 30-SEP-15 5E27 TITLE THE STRUCTURE OF RESUSCITATION PROMOTING FACTOR B FROM M. TUBERCULOSIS TITLE 2 REVEALS UNEXPECTED UBIQUITIN-LIKE DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESUSCITATION-PROMOTING FACTOR RPFB; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RESUSCITATION-PROMOTING FACTOR RPFB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RPFB, ABI38_15460, BN1303_02209, ERS024750_01702, SOURCE 5 ERS024751_02059, ERS024758_02236, ERS024764_01503, ERS094182_03333, SOURCE 6 ERS124362_01696, ERS124821_03131, ERS124823_03398, ERS124824_03090, SOURCE 7 ERS124825_03322, ERS124826_03034, ERS124827_03238, ERS124828_02982, SOURCE 8 ERS124829_03081, ERS124830_03164, ERS124832_03150, IQ42_14370, SOURCE 9 IQ45_14195, IQ47_14175, IQ48_14250, IU12_14990, IU13_14360, SOURCE 10 IU15_14665, IU16_14305, IU21_14520, T209_14145; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CELL WALL, PEPTIDOGLYCAN, TUBERCULOSIS, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR A.RUGGIERO,F.SQUEGLIA,M.ROMANO,L.VITAGLIANO,A.DE SIMONE,R.BERISIO REVDAT 2 23-DEC-15 5E27 1 JRNL REVDAT 1 18-NOV-15 5E27 0 JRNL AUTH A.RUGGIERO,F.SQUEGLIA,M.ROMANO,L.VITAGLIANO,A.DE SIMONE, JRNL AUTH 2 R.BERISIO JRNL TITL THE STRUCTURE OF RESUSCITATION PROMOTING FACTOR B FROM M. JRNL TITL 2 TUBERCULOSIS REVEALS UNEXPECTED UBIQUITIN-LIKE DOMAINS. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1860 445 2015 JRNL REFN ISSN 0006-3002 JRNL PMID 26549874 JRNL DOI 10.1016/J.BBAGEN.2015.11.001 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 15476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 826 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 63.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3293 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.797 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.372 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.300 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.924 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3385 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4644 ; 1.827 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 8.028 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;32.789 ;24.126 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 490 ;21.773 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;19.521 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2646 ; 0.008 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2222 ; 0.655 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3588 ; 1.241 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1163 ; 1.947 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1055 ; 3.379 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E27 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94,0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17505 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 16.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5 MG ML-1 PROTEIN, 18 % (V/V) ETHANOL REMARK 280 IN 50 MM SODIUM TRIS-HCL BUFFER, PH 8.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.14300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.14300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.18800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.49500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.18800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.49500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.14300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.18800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.49500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.14300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.18800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.49500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 115 REMARK 465 ALA A 116 REMARK 465 PRO A 117 REMARK 465 ALA A 118 REMARK 465 ALA A 119 REMARK 465 ALA A 120 REMARK 465 SER A 121 REMARK 465 ARG A 122 REMARK 465 ALA A 123 REMARK 465 SER A 124 REMARK 465 ARG A 125 REMARK 465 VAL A 126 REMARK 465 PRO A 127 REMARK 465 LEU A 128 REMARK 465 SER A 129 REMARK 465 GLY A 130 REMARK 465 MET A 131 REMARK 465 ALA A 132 REMARK 465 LEU A 133 REMARK 465 PRO A 134 REMARK 465 VAL A 135 REMARK 465 VAL A 136 REMARK 465 THR B 115 REMARK 465 ALA B 116 REMARK 465 PRO B 117 REMARK 465 ALA B 118 REMARK 465 ALA B 119 REMARK 465 ALA B 120 REMARK 465 SER B 121 REMARK 465 ARG B 122 REMARK 465 ALA B 123 REMARK 465 SER B 124 REMARK 465 ARG B 125 REMARK 465 VAL B 126 REMARK 465 PRO B 127 REMARK 465 LEU B 128 REMARK 465 SER B 129 REMARK 465 GLY B 130 REMARK 465 MET B 131 REMARK 465 ALA B 132 REMARK 465 LEU B 133 REMARK 465 PRO B 134 REMARK 465 VAL B 135 REMARK 465 VAL B 136 REMARK 465 SER B 137 REMARK 465 ALA B 138 REMARK 465 ALA B 359 REMARK 465 GLY B 360 REMARK 465 ALA B 361 REMARK 465 ARG B 362 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 153 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 362 NE CZ NH1 NH2 REMARK 470 ARG B 222 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 358 C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 319 OG1 THR B 343 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 228 C - N - CD ANGL. DEV. = 12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 150 144.36 -170.18 REMARK 500 GLN A 172 -114.47 35.36 REMARK 500 PRO A 178 -173.93 -62.84 REMARK 500 VAL A 258 -65.02 -97.49 REMARK 500 GLU A 263 153.05 -29.87 REMARK 500 ASP A 281 -164.82 75.05 REMARK 500 ASN A 303 -63.95 178.23 REMARK 500 GLN B 172 -123.53 49.28 REMARK 500 PRO B 178 -177.44 -56.66 REMARK 500 GLU B 186 122.16 -21.79 REMARK 500 VAL B 258 -67.98 -100.36 REMARK 500 ALA B 293 14.96 -143.13 REMARK 500 ASN B 300 77.38 -176.83 REMARK 500 ASN B 319 20.21 -78.66 REMARK 500 THR B 332 169.64 -46.60 REMARK 500 ARG B 344 -3.59 -52.88 REMARK 500 TRP B 349 61.08 -109.08 REMARK 500 ALA B 351 35.15 -83.55 REMARK 500 TRP B 352 49.82 -153.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 436 DISTANCE = 5.83 ANGSTROMS DBREF1 5E27 A 115 362 UNP A0A045K816_MYCTX DBREF2 5E27 A A0A045K816 115 362 DBREF1 5E27 B 115 362 UNP A0A045K816_MYCTX DBREF2 5E27 B A0A045K816 115 362 SEQRES 1 A 248 THR ALA PRO ALA ALA ALA SER ARG ALA SER ARG VAL PRO SEQRES 2 A 248 LEU SER GLY MET ALA LEU PRO VAL VAL SER ALA LYS THR SEQRES 3 A 248 VAL GLN LEU ASN ASP GLY GLY LEU VAL ARG THR VAL HIS SEQRES 4 A 248 LEU PRO ALA PRO ASN VAL ALA GLY LEU LEU SER ALA ALA SEQRES 5 A 248 GLY VAL PRO LEU LEU GLN SER ASP HIS VAL VAL PRO ALA SEQRES 6 A 248 ALA THR ALA PRO ILE VAL GLU GLY MET GLN ILE GLN VAL SEQRES 7 A 248 THR ARG ASN ARG ILE LYS LYS VAL THR GLU ARG LEU PRO SEQRES 8 A 248 LEU PRO PRO ASN ALA ARG ARG VAL GLU ASP PRO GLU MET SEQRES 9 A 248 ASN MET SER ARG GLU VAL VAL GLU ASP PRO GLY VAL PRO SEQRES 10 A 248 GLY THR GLN ASP VAL THR PHE ALA VAL ALA GLU VAL ASN SEQRES 11 A 248 GLY VAL GLU THR GLY ARG LEU PRO VAL ALA ASN VAL VAL SEQRES 12 A 248 VAL THR PRO ALA HIS GLU ALA VAL VAL ARG VAL GLY THR SEQRES 13 A 248 LYS PRO GLY THR GLU VAL PRO PRO VAL ILE ASP GLY SER SEQRES 14 A 248 ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY GLY ASN SEQRES 15 A 248 TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY GLY VAL SEQRES 16 A 248 GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY GLY LEU SEQRES 17 A 248 ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG GLU GLU SEQRES 18 A 248 GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG GLN GLY SEQRES 19 A 248 TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA GLY ALA SEQRES 20 A 248 ARG SEQRES 1 B 248 THR ALA PRO ALA ALA ALA SER ARG ALA SER ARG VAL PRO SEQRES 2 B 248 LEU SER GLY MET ALA LEU PRO VAL VAL SER ALA LYS THR SEQRES 3 B 248 VAL GLN LEU ASN ASP GLY GLY LEU VAL ARG THR VAL HIS SEQRES 4 B 248 LEU PRO ALA PRO ASN VAL ALA GLY LEU LEU SER ALA ALA SEQRES 5 B 248 GLY VAL PRO LEU LEU GLN SER ASP HIS VAL VAL PRO ALA SEQRES 6 B 248 ALA THR ALA PRO ILE VAL GLU GLY MET GLN ILE GLN VAL SEQRES 7 B 248 THR ARG ASN ARG ILE LYS LYS VAL THR GLU ARG LEU PRO SEQRES 8 B 248 LEU PRO PRO ASN ALA ARG ARG VAL GLU ASP PRO GLU MET SEQRES 9 B 248 ASN MET SER ARG GLU VAL VAL GLU ASP PRO GLY VAL PRO SEQRES 10 B 248 GLY THR GLN ASP VAL THR PHE ALA VAL ALA GLU VAL ASN SEQRES 11 B 248 GLY VAL GLU THR GLY ARG LEU PRO VAL ALA ASN VAL VAL SEQRES 12 B 248 VAL THR PRO ALA HIS GLU ALA VAL VAL ARG VAL GLY THR SEQRES 13 B 248 LYS PRO GLY THR GLU VAL PRO PRO VAL ILE ASP GLY SER SEQRES 14 B 248 ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY GLY ASN SEQRES 15 B 248 TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY GLY VAL SEQRES 16 B 248 GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY GLY LEU SEQRES 17 B 248 ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG GLU GLU SEQRES 18 B 248 GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG GLN GLY SEQRES 19 B 248 TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA GLY ALA SEQRES 20 B 248 ARG FORMUL 3 HOH *76(H2 O) HELIX 1 AA1 ASN A 158 ALA A 166 1 9 HELIX 2 AA2 GLY A 282 GLY A 294 1 13 HELIX 3 AA3 ASP A 312 ASN A 319 1 8 HELIX 4 AA4 GLY A 320 TYR A 324 5 5 HELIX 5 AA5 ARG A 327 ALA A 331 5 5 HELIX 6 AA6 THR A 332 GLY A 348 1 17 HELIX 7 AA7 TRP A 352 GLY A 360 1 9 HELIX 8 AA8 ASN B 158 ALA B 166 1 9 HELIX 9 AA9 ASP B 281 ALA B 293 1 13 HELIX 10 AB1 ASP B 312 ASN B 319 1 8 HELIX 11 AB2 GLY B 320 TYR B 324 5 5 HELIX 12 AB3 ARG B 327 ALA B 331 5 5 HELIX 13 AB4 THR B 332 VAL B 342 1 11 SHEET 1 AA1 3 VAL A 141 ASP A 145 0 SHEET 2 AA1 3 MET A 188 THR A 193 1 O ILE A 190 N ASN A 144 SHEET 3 AA1 3 HIS A 175 VAL A 177 -1 N VAL A 177 O GLN A 191 SHEET 1 AA2 3 ASN A 195 LEU A 206 0 SHEET 2 AA2 3 GLY A 232 VAL A 243 -1 O VAL A 240 N LYS A 198 SHEET 3 AA2 3 VAL A 246 THR A 259 -1 O VAL A 253 N THR A 237 SHEET 1 AA3 3 ALA A 210 ASP A 215 0 SHEET 2 AA3 3 ALA A 264 GLY A 269 1 O VAL A 266 N ARG A 211 SHEET 3 AA3 3 GLU A 223 ASP A 227 -1 N ASP A 227 O VAL A 265 SHEET 1 AA4 4 LEU B 148 VAL B 152 0 SHEET 2 AA4 4 VAL B 141 ASP B 145 -1 N ASP B 145 O LEU B 148 SHEET 3 AA4 4 GLN B 189 THR B 193 1 O ILE B 190 N ASN B 144 SHEET 4 AA4 4 HIS B 175 VAL B 177 -1 N HIS B 175 O THR B 193 SHEET 1 AA5 3 ASN B 195 LEU B 206 0 SHEET 2 AA5 3 GLY B 232 VAL B 243 -1 O VAL B 240 N LYS B 198 SHEET 3 AA5 3 VAL B 246 THR B 259 -1 O VAL B 253 N THR B 237 SHEET 1 AA6 3 ALA B 210 ASP B 215 0 SHEET 2 AA6 3 ALA B 264 GLY B 269 1 O VAL B 266 N ARG B 211 SHEET 3 AA6 3 GLU B 223 ASP B 227 -1 N VAL B 224 O ARG B 267 SSBOND 1 CYS A 291 CYS A 355 1555 1555 2.06 SSBOND 2 CYS B 291 CYS B 355 1555 1555 2.06 CISPEP 1 VAL A 177 PRO A 178 0 -6.35 CISPEP 2 VAL B 177 PRO B 178 0 -9.25 CRYST1 102.376 126.990 86.286 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009768 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011589 0.00000