HEADER TRANSLATION 07-OCT-15 5E57 TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM SMEGMATIS AMTR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION REGULATOR AMTR; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 14-225; COMPND 5 SYNONYM: TRANSCRIPTIONAL REGULATOR,TETR FAMILY; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 GENE: MSMEG_4300, MSMEI_4199; SOURCE 7 EXPRESSION_SYSTEM: MYCOBACTERIUM SMEGMATIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 1772 KEYWDS HTH DNA BINDING MOTIF, LIGAND BINDING DOMAIN, TETR, NITROGEN KEYWDS 2 REGULATION, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR C.J.VICKERS,J.L.MCKENZIE,V.L.ARCUS REVDAT 4 06-MAR-24 5E57 1 REMARK REVDAT 3 26-FEB-20 5E57 1 JRNL REMARK REVDAT 2 26-OCT-16 5E57 1 JRNL REVDAT 1 28-SEP-16 5E57 0 JRNL AUTH M.PETRIDIS,C.VICKERS,J.ROBSON,J.L.MCKENZIE,M.BEREZA, JRNL AUTH 2 A.SHARROCK,H.L.AUNG,V.L.ARCUS,G.M.COOK JRNL TITL STRUCTURE AND FUNCTION OF AMTR IN MYCOBACTERIUM SMEGMATIS: JRNL TITL 2 IMPLICATIONS FOR POST-TRANSCRIPTIONAL REGULATION OF UREA JRNL TITL 3 METABOLISM THROUGH A SMALL ANTISENSE RNA. JRNL REF J.MOL.BIOL. V. 428 4315 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 27640309 JRNL DOI 10.1016/J.JMB.2016.09.009 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 48033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 2290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4566 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.168 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.715 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5E57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214378. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0-7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50329 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 37.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.69400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA ACETATE, NA FORMATE,, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 90.92500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 90.92500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -94.00209 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 52.89500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 39.45018 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -3.07709 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 39.45018 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 404 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 14 REMARK 465 PRO A 15 REMARK 465 ARG A 16 REMARK 465 ARG A 17 REMARK 465 PRO A 18 REMARK 465 GLY A 19 REMARK 465 GLN B 14 REMARK 465 PRO B 15 REMARK 465 ARG B 16 REMARK 465 ARG B 17 REMARK 465 PRO B 18 REMARK 465 GLY B 19 REMARK 465 GLN B 20 REMARK 465 GLY B 221 REMARK 465 ARG B 222 REMARK 465 ALA B 223 REMARK 465 ALA B 224 REMARK 465 ARG B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 GLY C 222 REMARK 465 ARG C 223 REMARK 465 ALA C 224 REMARK 465 ALA C 225 REMARK 465 ARG C 226 REMARK 465 HIS C 227 REMARK 465 HIS C 228 REMARK 465 HIS C 229 REMARK 465 HIS C 230 REMARK 465 HIS C 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 20 CG CD OE1 NE2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 SER A 91 OG REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 VAL A 181 CG1 CG2 REMARK 470 ASP A 201 CG OD1 OD2 REMARK 470 ARG A 218 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 226 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 227 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 228 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 229 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 230 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 45 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 ARG B 113 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 135 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 154 CG CD OE1 OE2 REMARK 470 ASP B 201 CG OD1 OD2 REMARK 470 GLU B 206 CG CD OE1 OE2 REMARK 470 ARG B 218 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 18 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 46 CG CD NE CZ NH1 NH2 REMARK 470 VAL C 182 CG1 CG2 REMARK 470 VAL C 183 CG1 CG2 REMARK 470 ASP C 202 CG OD1 OD2 REMARK 470 ARG C 219 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLU C 186 O HOH C 401 2.02 REMARK 500 OE1 GLU A 192 O HOH A 401 2.08 REMARK 500 CB VAL B 51 O HOH B 444 2.09 REMARK 500 O THR C 128 NH2 ARG C 135 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 41 CB SER A 41 OG -0.086 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 41 CB - CA - C ANGL. DEV. = -12.0 DEGREES REMARK 500 ASP A 66 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 134 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 163 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 LEU A 195 CA - CB - CG ANGL. DEV. = -20.6 DEGREES REMARK 500 ARG B 97 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP B 162 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 163 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 179 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 196 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 55 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 135 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG C 135 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG C 137 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 LEU C 196 CA - CB - CG ANGL. DEV. = -17.3 DEGREES REMARK 500 ASP C 204 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 222 -66.46 112.61 REMARK 500 VAL C 182 -66.54 -93.82 REMARK 500 VAL C 183 108.48 84.42 REMARK 500 PRO C 185 -79.82 -37.32 REMARK 500 GLU C 186 43.15 -91.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 301 DBREF 5E57 A 14 225 UNP A0R089 A0R089_MYCS2 14 225 DBREF 5E57 B 14 225 UNP A0R089 A0R089_MYCS2 14 225 DBREF 5E57 C 15 226 UNP A0R089 A0R089_MYCS2 14 225 SEQADV 5E57 HIS A 226 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS A 227 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS A 228 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS A 229 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS A 230 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS B 226 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS B 227 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS B 228 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS B 229 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS B 230 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS C 227 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS C 228 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS C 229 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS C 230 UNP A0R089 EXPRESSION TAG SEQADV 5E57 HIS C 231 UNP A0R089 EXPRESSION TAG SEQRES 1 A 217 GLN PRO ARG ARG PRO GLY GLN THR ALA ARG GLU GLU ILE SEQRES 2 A 217 LEU ASP ALA ALA ALA GLU LEU PHE THR THR HIS GLY TYR SEQRES 3 A 217 GLY SER THR SER THR ARG ARG ILE ALA ASP GLU VAL GLY SEQRES 4 A 217 VAL ARG GLN ALA SER LEU TYR HIS HIS PHE ALA THR LYS SEQRES 5 A 217 ASP ASP ILE LEU ASP ALA LEU LEU ALA GLY THR VAL ASP SEQRES 6 A 217 GLU PRO LEU GLU LEU ALA HIS GLY LEU LEU GLY GLU SER SEQRES 7 A 217 GLY PRO ALA ALA PRO ARG LEU HIS ALA LEU VAL ILE TYR SEQRES 8 A 217 ASP ALA SER GLN LEU CYS ALA GLY ARG TRP ASN LEU GLY SEQRES 9 A 217 ALA LEU TYR LEU LEU PRO GLU LEU ARG THR ASP ARG PHE SEQRES 10 A 217 ALA PRO PHE ARG ARG ARG ARG ALA GLU LEU ARG SER ALA SEQRES 11 A 217 TYR ARG SER LEU ALA ALA ALA VAL ILE ALA GLU CYS GLY SEQRES 12 A 217 GLY PRO PRO GLU ALA ASP ASP LEU PRO PHE ARG LEU VAL SEQRES 13 A 217 GLU SER VAL ILE ASN SER ARG SER ASP ASP ALA VAL VAL SEQRES 14 A 217 PRO PRO GLU GLN PRO TRP VAL ILE GLY GLU GLY ALA LEU SEQRES 15 A 217 ARG VAL LEU GLY PHE ASP GLY ASP PHE ALA GLU LEU ALA SEQRES 16 A 217 ALA ALA THR ALA SER ARG LEU GLY VAL ARG PRO PRO GLY SEQRES 17 A 217 ARG ALA ALA ARG HIS HIS HIS HIS HIS SEQRES 1 B 217 GLN PRO ARG ARG PRO GLY GLN THR ALA ARG GLU GLU ILE SEQRES 2 B 217 LEU ASP ALA ALA ALA GLU LEU PHE THR THR HIS GLY TYR SEQRES 3 B 217 GLY SER THR SER THR ARG ARG ILE ALA ASP GLU VAL GLY SEQRES 4 B 217 VAL ARG GLN ALA SER LEU TYR HIS HIS PHE ALA THR LYS SEQRES 5 B 217 ASP ASP ILE LEU ASP ALA LEU LEU ALA GLY THR VAL ASP SEQRES 6 B 217 GLU PRO LEU GLU LEU ALA HIS GLY LEU LEU GLY GLU SER SEQRES 7 B 217 GLY PRO ALA ALA PRO ARG LEU HIS ALA LEU VAL ILE TYR SEQRES 8 B 217 ASP ALA SER GLN LEU CYS ALA GLY ARG TRP ASN LEU GLY SEQRES 9 B 217 ALA LEU TYR LEU LEU PRO GLU LEU ARG THR ASP ARG PHE SEQRES 10 B 217 ALA PRO PHE ARG ARG ARG ARG ALA GLU LEU ARG SER ALA SEQRES 11 B 217 TYR ARG SER LEU ALA ALA ALA VAL ILE ALA GLU CYS GLY SEQRES 12 B 217 GLY PRO PRO GLU ALA ASP ASP LEU PRO PHE ARG LEU VAL SEQRES 13 B 217 GLU SER VAL ILE ASN SER ARG SER ASP ASP ALA VAL VAL SEQRES 14 B 217 PRO PRO GLU GLN PRO TRP VAL ILE GLY GLU GLY ALA LEU SEQRES 15 B 217 ARG VAL LEU GLY PHE ASP GLY ASP PHE ALA GLU LEU ALA SEQRES 16 B 217 ALA ALA THR ALA SER ARG LEU GLY VAL ARG PRO PRO GLY SEQRES 17 B 217 ARG ALA ALA ARG HIS HIS HIS HIS HIS SEQRES 1 C 217 GLN PRO ARG ARG PRO GLY GLN THR ALA ARG GLU GLU ILE SEQRES 2 C 217 LEU ASP ALA ALA ALA GLU LEU PHE THR THR HIS GLY TYR SEQRES 3 C 217 GLY SER THR SER THR ARG ARG ILE ALA ASP GLU VAL GLY SEQRES 4 C 217 VAL ARG GLN ALA SER LEU TYR HIS HIS PHE ALA THR LYS SEQRES 5 C 217 ASP ASP ILE LEU ASP ALA LEU LEU ALA GLY THR VAL ASP SEQRES 6 C 217 GLU PRO LEU GLU LEU ALA HIS GLY LEU LEU GLY GLU SER SEQRES 7 C 217 GLY PRO ALA ALA PRO ARG LEU HIS ALA LEU VAL ILE TYR SEQRES 8 C 217 ASP ALA SER GLN LEU CYS ALA GLY ARG TRP ASN LEU GLY SEQRES 9 C 217 ALA LEU TYR LEU LEU PRO GLU LEU ARG THR ASP ARG PHE SEQRES 10 C 217 ALA PRO PHE ARG ARG ARG ARG ALA GLU LEU ARG SER ALA SEQRES 11 C 217 TYR ARG SER LEU ALA ALA ALA VAL ILE ALA GLU CYS GLY SEQRES 12 C 217 GLY PRO PRO GLU ALA ASP ASP LEU PRO PHE ARG LEU VAL SEQRES 13 C 217 GLU SER VAL ILE ASN SER ARG SER ASP ASP ALA VAL VAL SEQRES 14 C 217 PRO PRO GLU GLN PRO TRP VAL ILE GLY GLU GLY ALA LEU SEQRES 15 C 217 ARG VAL LEU GLY PHE ASP GLY ASP PHE ALA GLU LEU ALA SEQRES 16 C 217 ALA ALA THR ALA SER ARG LEU GLY VAL ARG PRO PRO GLY SEQRES 17 C 217 ARG ALA ALA ARG HIS HIS HIS HIS HIS HET ACT A 301 4 HET ACT B 301 4 HET ACT C 301 4 HETNAM ACT ACETATE ION FORMUL 4 ACT 3(C2 H3 O2 1-) FORMUL 7 HOH *152(H2 O) HELIX 1 AA1 THR A 21 HIS A 37 1 17 HELIX 2 AA2 SER A 43 GLY A 52 1 10 HELIX 3 AA3 ARG A 54 TYR A 59 1 6 HELIX 4 AA4 THR A 64 GLY A 75 1 12 HELIX 5 AA5 VAL A 77 GLY A 89 1 13 HELIX 6 AA6 ALA A 94 GLY A 112 1 19 HELIX 7 AA7 ASN A 115 ARG A 129 5 15 HELIX 8 AA8 PHE A 130 GLY A 156 1 27 HELIX 9 AA9 PRO A 158 ASP A 162 5 5 HELIX 10 AB1 ASP A 163 ASP A 179 1 17 HELIX 11 AB2 GLU A 185 VAL A 197 1 13 HELIX 12 AB3 ASP A 203 GLY A 216 1 14 HELIX 13 AB4 ARG A 222 HIS A 230 1 9 HELIX 14 AB5 ALA B 22 HIS B 37 1 16 HELIX 15 AB6 SER B 43 GLY B 52 1 10 HELIX 16 AB7 ARG B 54 TYR B 59 1 6 HELIX 17 AB8 THR B 64 GLY B 89 1 26 HELIX 18 AB9 ALA B 94 GLY B 112 1 19 HELIX 19 AC1 ASN B 115 ARG B 129 5 15 HELIX 20 AC2 PHE B 130 GLY B 156 1 27 HELIX 21 AC3 PRO B 158 ASP B 162 5 5 HELIX 22 AC4 ASP B 163 ASP B 179 1 17 HELIX 23 AC5 GLU B 185 VAL B 197 1 13 HELIX 24 AC6 ASP B 203 GLY B 216 1 14 HELIX 25 AC7 THR C 22 HIS C 38 1 17 HELIX 26 AC8 SER C 44 GLY C 53 1 10 HELIX 27 AC9 ARG C 55 TYR C 60 1 6 HELIX 28 AD1 THR C 65 GLY C 90 1 26 HELIX 29 AD2 PRO C 94 GLY C 113 1 20 HELIX 30 AD3 ASN C 116 ARG C 130 5 15 HELIX 31 AD4 PHE C 131 GLY C 157 1 27 HELIX 32 AD5 PRO C 159 ASP C 163 5 5 HELIX 33 AD6 ASP C 164 ASP C 180 1 17 HELIX 34 AD7 GLU C 186 VAL C 198 1 13 HELIX 35 AD8 ASP C 204 GLY C 217 1 14 SITE 1 AC1 5 THR A 76 ASP A 105 TYR A 120 LEU A 140 SITE 2 AC1 5 GLU A 170 SITE 1 AC2 6 THR B 76 ASP B 105 TYR B 120 LEU B 140 SITE 2 AC2 6 PHE B 166 GLU B 170 SITE 1 AC3 5 THR C 77 ASP C 106 TYR C 121 LEU C 141 SITE 2 AC3 5 GLU C 171 CRYST1 181.850 105.790 39.570 90.00 94.46 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005499 0.000000 0.000429 0.00000 SCALE2 0.000000 0.009453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025348 0.00000