data_5E71 # _entry.id 5E71 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5E71 WWPDB D_1000214458 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5E72 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5E71 _pdbx_database_status.recvd_initial_deposition_date 2015-10-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Hirata, A.' _audit_author.pdbx_ordinal 1 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structural and functional analyses of the archaeal tRNA m2G/m22G10 methyltransferase aTrm11 provide mechanistic insights into site specificity of a tRNA methyltransferase that contains common RNA-binding modules. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkw561 _citation.pdbx_database_id_PubMed 27325738 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hirata, A.' 1 ? primary 'Nishiyama, S.' 2 ? primary 'Tamura, T.' 3 ? primary 'Yamauchi, A.' 4 ? primary 'Hori, H.' 5 ? # _cell.entry_id 5E71 _cell.length_a 47.733 _cell.length_b 53.520 _cell.length_c 134.859 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E71 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N2, N2-dimethylguanosine tRNA methyltransferase' 39300.129 1 ? ? ? ? 2 water nat water 18.015 175 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLYVEILGNLPEMARDEVKAMLELGGGEIIGQDYLFLKVDAGEKAFPFLDRLGLAHEYGLLLVEADSVEELLQKAGEVEW PIKGAFKVDTETMANCRHDVLDLPRKLGAVIHAQGFRVNLSKPDTVVRVYCGERLYAGIRLRYFDPKDFEKRKAHHRPFF RPISLHPRVSRALVNLTKATREILDPFMGAGGILIEAGLLGLRVYGVDIRPEMVEGAETNLKHYGVRDYTLKLGDATRLE DLFPDKKFEAVATDPPYGTAATLAGRKRDELYRKALRSIYNVLEDGGRLAIAFPTDFNGKAEAEAVGFRTLGRYYQRVHK SLERYFYVFEKLEVLFQGPSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLYVEILGNLPEMARDEVKAMLELGGGEIIGQDYLFLKVDAGEKAFPFLDRLGLAHEYGLLLVEADSVEELLQKAGEVEW PIKGAFKVDTETMANCRHDVLDLPRKLGAVIHAQGFRVNLSKPDTVVRVYCGERLYAGIRLRYFDPKDFEKRKAHHRPFF RPISLHPRVSRALVNLTKATREILDPFMGAGGILIEAGLLGLRVYGVDIRPEMVEGAETNLKHYGVRDYTLKLGDATRLE DLFPDKKFEAVATDPPYGTAATLAGRKRDELYRKALRSIYNVLEDGGRLAIAFPTDFNGKAEAEAVGFRTLGRYYQRVHK SLERYFYVFEKLEVLFQGPSHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 TYR n 1 4 VAL n 1 5 GLU n 1 6 ILE n 1 7 LEU n 1 8 GLY n 1 9 ASN n 1 10 LEU n 1 11 PRO n 1 12 GLU n 1 13 MET n 1 14 ALA n 1 15 ARG n 1 16 ASP n 1 17 GLU n 1 18 VAL n 1 19 LYS n 1 20 ALA n 1 21 MET n 1 22 LEU n 1 23 GLU n 1 24 LEU n 1 25 GLY n 1 26 GLY n 1 27 GLY n 1 28 GLU n 1 29 ILE n 1 30 ILE n 1 31 GLY n 1 32 GLN n 1 33 ASP n 1 34 TYR n 1 35 LEU n 1 36 PHE n 1 37 LEU n 1 38 LYS n 1 39 VAL n 1 40 ASP n 1 41 ALA n 1 42 GLY n 1 43 GLU n 1 44 LYS n 1 45 ALA n 1 46 PHE n 1 47 PRO n 1 48 PHE n 1 49 LEU n 1 50 ASP n 1 51 ARG n 1 52 LEU n 1 53 GLY n 1 54 LEU n 1 55 ALA n 1 56 HIS n 1 57 GLU n 1 58 TYR n 1 59 GLY n 1 60 LEU n 1 61 LEU n 1 62 LEU n 1 63 VAL n 1 64 GLU n 1 65 ALA n 1 66 ASP n 1 67 SER n 1 68 VAL n 1 69 GLU n 1 70 GLU n 1 71 LEU n 1 72 LEU n 1 73 GLN n 1 74 LYS n 1 75 ALA n 1 76 GLY n 1 77 GLU n 1 78 VAL n 1 79 GLU n 1 80 TRP n 1 81 PRO n 1 82 ILE n 1 83 LYS n 1 84 GLY n 1 85 ALA n 1 86 PHE n 1 87 LYS n 1 88 VAL n 1 89 ASP n 1 90 THR n 1 91 GLU n 1 92 THR n 1 93 MET n 1 94 ALA n 1 95 ASN n 1 96 CYS n 1 97 ARG n 1 98 HIS n 1 99 ASP n 1 100 VAL n 1 101 LEU n 1 102 ASP n 1 103 LEU n 1 104 PRO n 1 105 ARG n 1 106 LYS n 1 107 LEU n 1 108 GLY n 1 109 ALA n 1 110 VAL n 1 111 ILE n 1 112 HIS n 1 113 ALA n 1 114 GLN n 1 115 GLY n 1 116 PHE n 1 117 ARG n 1 118 VAL n 1 119 ASN n 1 120 LEU n 1 121 SER n 1 122 LYS n 1 123 PRO n 1 124 ASP n 1 125 THR n 1 126 VAL n 1 127 VAL n 1 128 ARG n 1 129 VAL n 1 130 TYR n 1 131 CYS n 1 132 GLY n 1 133 GLU n 1 134 ARG n 1 135 LEU n 1 136 TYR n 1 137 ALA n 1 138 GLY n 1 139 ILE n 1 140 ARG n 1 141 LEU n 1 142 ARG n 1 143 TYR n 1 144 PHE n 1 145 ASP n 1 146 PRO n 1 147 LYS n 1 148 ASP n 1 149 PHE n 1 150 GLU n 1 151 LYS n 1 152 ARG n 1 153 LYS n 1 154 ALA n 1 155 HIS n 1 156 HIS n 1 157 ARG n 1 158 PRO n 1 159 PHE n 1 160 PHE n 1 161 ARG n 1 162 PRO n 1 163 ILE n 1 164 SER n 1 165 LEU n 1 166 HIS n 1 167 PRO n 1 168 ARG n 1 169 VAL n 1 170 SER n 1 171 ARG n 1 172 ALA n 1 173 LEU n 1 174 VAL n 1 175 ASN n 1 176 LEU n 1 177 THR n 1 178 LYS n 1 179 ALA n 1 180 THR n 1 181 ARG n 1 182 GLU n 1 183 ILE n 1 184 LEU n 1 185 ASP n 1 186 PRO n 1 187 PHE n 1 188 MET n 1 189 GLY n 1 190 ALA n 1 191 GLY n 1 192 GLY n 1 193 ILE n 1 194 LEU n 1 195 ILE n 1 196 GLU n 1 197 ALA n 1 198 GLY n 1 199 LEU n 1 200 LEU n 1 201 GLY n 1 202 LEU n 1 203 ARG n 1 204 VAL n 1 205 TYR n 1 206 GLY n 1 207 VAL n 1 208 ASP n 1 209 ILE n 1 210 ARG n 1 211 PRO n 1 212 GLU n 1 213 MET n 1 214 VAL n 1 215 GLU n 1 216 GLY n 1 217 ALA n 1 218 GLU n 1 219 THR n 1 220 ASN n 1 221 LEU n 1 222 LYS n 1 223 HIS n 1 224 TYR n 1 225 GLY n 1 226 VAL n 1 227 ARG n 1 228 ASP n 1 229 TYR n 1 230 THR n 1 231 LEU n 1 232 LYS n 1 233 LEU n 1 234 GLY n 1 235 ASP n 1 236 ALA n 1 237 THR n 1 238 ARG n 1 239 LEU n 1 240 GLU n 1 241 ASP n 1 242 LEU n 1 243 PHE n 1 244 PRO n 1 245 ASP n 1 246 LYS n 1 247 LYS n 1 248 PHE n 1 249 GLU n 1 250 ALA n 1 251 VAL n 1 252 ALA n 1 253 THR n 1 254 ASP n 1 255 PRO n 1 256 PRO n 1 257 TYR n 1 258 GLY n 1 259 THR n 1 260 ALA n 1 261 ALA n 1 262 THR n 1 263 LEU n 1 264 ALA n 1 265 GLY n 1 266 ARG n 1 267 LYS n 1 268 ARG n 1 269 ASP n 1 270 GLU n 1 271 LEU n 1 272 TYR n 1 273 ARG n 1 274 LYS n 1 275 ALA n 1 276 LEU n 1 277 ARG n 1 278 SER n 1 279 ILE n 1 280 TYR n 1 281 ASN n 1 282 VAL n 1 283 LEU n 1 284 GLU n 1 285 ASP n 1 286 GLY n 1 287 GLY n 1 288 ARG n 1 289 LEU n 1 290 ALA n 1 291 ILE n 1 292 ALA n 1 293 PHE n 1 294 PRO n 1 295 THR n 1 296 ASP n 1 297 PHE n 1 298 ASN n 1 299 GLY n 1 300 LYS n 1 301 ALA n 1 302 GLU n 1 303 ALA n 1 304 GLU n 1 305 ALA n 1 306 VAL n 1 307 GLY n 1 308 PHE n 1 309 ARG n 1 310 THR n 1 311 LEU n 1 312 GLY n 1 313 ARG n 1 314 TYR n 1 315 TYR n 1 316 GLN n 1 317 ARG n 1 318 VAL n 1 319 HIS n 1 320 LYS n 1 321 SER n 1 322 LEU n 1 323 GLU n 1 324 ARG n 1 325 TYR n 1 326 PHE n 1 327 TYR n 1 328 VAL n 1 329 PHE n 1 330 GLU n 1 331 LYS n 1 332 LEU n 1 333 GLU n 1 334 VAL n 1 335 LEU n 1 336 PHE n 1 337 GLN n 1 338 GLY n 1 339 PRO n 1 340 SER n 1 341 HIS n 1 342 HIS n 1 343 HIS n 1 344 HIS n 1 345 HIS n 1 346 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 346 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TK0981 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-918 / JCM 12380 / KOD1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 69014 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5JID5_THEKO _struct_ref.pdbx_db_accession Q5JID5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLYVEILGNLPEMARDEVKAMLELGGGEIIGQDYLFLKVDAGEKAFPFLDRLGLAHEYGLLLVEADSVEELLQKAGEVEW PIKGAFKVDTETMANCRHDVLDLPRKLGAVIHAQGFRVNLSKPDTVVRVYCGERLYAGIRLRYFDPKDFEKRKAHHRPFF RPISLHPRVSRALVNLTKATREILDPFMGAGGILIEAGLLGLRVYGVDIRPEMVEGAETNLKHYGVRDYTLKLGDATRLE DLFPDKKFEAVATDPPYGTAATLAGRKRDELYRKALRSIYNVLEDGGRLAIAFPTDFNGKAEAEAVGFRTLGRYYQRVHK SLERYFYVFEK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5E71 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 331 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5JID5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 331 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 331 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5E71 LEU A 332 ? UNP Q5JID5 ? ? 'expression tag' 332 1 1 5E71 GLU A 333 ? UNP Q5JID5 ? ? 'expression tag' 333 2 1 5E71 VAL A 334 ? UNP Q5JID5 ? ? 'expression tag' 334 3 1 5E71 LEU A 335 ? UNP Q5JID5 ? ? 'expression tag' 335 4 1 5E71 PHE A 336 ? UNP Q5JID5 ? ? 'expression tag' 336 5 1 5E71 GLN A 337 ? UNP Q5JID5 ? ? 'expression tag' 337 6 1 5E71 GLY A 338 ? UNP Q5JID5 ? ? 'expression tag' 338 7 1 5E71 PRO A 339 ? UNP Q5JID5 ? ? 'expression tag' 339 8 1 5E71 SER A 340 ? UNP Q5JID5 ? ? 'expression tag' 340 9 1 5E71 HIS A 341 ? UNP Q5JID5 ? ? 'expression tag' 341 10 1 5E71 HIS A 342 ? UNP Q5JID5 ? ? 'expression tag' 342 11 1 5E71 HIS A 343 ? UNP Q5JID5 ? ? 'expression tag' 343 12 1 5E71 HIS A 344 ? UNP Q5JID5 ? ? 'expression tag' 344 13 1 5E71 HIS A 345 ? UNP Q5JID5 ? ? 'expression tag' 345 14 1 5E71 HIS A 346 ? UNP Q5JID5 ? ? 'expression tag' 346 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5E71 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '4.5M NaCl, 0.1M Tris-HCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL38B1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL38B1 _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 25.940 _reflns.entry_id 5E71 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 38847 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.100 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 53.658 _reflns.pdbx_netI_over_sigmaI 17.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.899 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.055 _reflns.pdbx_Rpim_I_all 0.021 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 275794 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.700 1.730 ? ? ? ? ? 1878 ? 100.000 ? ? ? ? 0.594 ? ? ? ? ? ? ? ? 7.200 ? 1.324 ? ? 0.641 0.238 0 1 1 0.951 ? 1.730 1.760 ? ? ? ? ? 1924 ? 100.000 ? ? ? ? 0.494 ? ? ? ? ? ? ? ? 7.200 ? 1.349 ? ? 0.533 0.197 0 2 1 0.958 ? 1.760 1.790 ? ? ? ? ? 1926 ? 100.000 ? ? ? ? 0.398 ? ? ? ? ? ? ? ? 7.200 ? 1.383 ? ? 0.429 0.159 0 3 1 0.966 ? 1.790 1.830 ? ? ? ? ? 1913 ? 100.000 ? ? ? ? 0.333 ? ? ? ? ? ? ? ? 7.200 ? 1.346 ? ? 0.359 0.132 0 4 1 0.971 ? 1.830 1.870 ? ? ? ? ? 1891 ? 100.000 ? ? ? ? 0.244 ? ? ? ? ? ? ? ? 7.200 ? 1.414 ? ? 0.263 0.097 0 5 1 0.987 ? 1.870 1.910 ? ? ? ? ? 1935 ? 100.000 ? ? ? ? 0.218 ? ? ? ? ? ? ? ? 7.200 ? 1.514 ? ? 0.234 0.087 0 6 1 0.988 ? 1.910 1.960 ? ? ? ? ? 1912 ? 100.000 ? ? ? ? 0.181 ? ? ? ? ? ? ? ? 7.300 ? 1.573 ? ? 0.195 0.072 0 7 1 0.991 ? 1.960 2.020 ? ? ? ? ? 1927 ? 100.000 ? ? ? ? 0.142 ? ? ? ? ? ? ? ? 7.200 ? 1.583 ? ? 0.153 0.057 0 8 1 0.994 ? 2.020 2.070 ? ? ? ? ? 1942 ? 100.000 ? ? ? ? 0.127 ? ? ? ? ? ? ? ? 7.200 ? 1.782 ? ? 0.137 0.051 0 9 1 0.995 ? 2.070 2.140 ? ? ? ? ? 1912 ? 100.000 ? ? ? ? 0.101 ? ? ? ? ? ? ? ? 7.300 ? 1.745 ? ? 0.109 0.040 0 10 1 0.996 ? 2.140 2.220 ? ? ? ? ? 1918 ? 100.000 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 7.300 ? 1.788 ? ? 0.088 0.033 0 11 1 0.998 ? 2.220 2.310 ? ? ? ? ? 1952 ? 100.000 ? ? ? ? 0.075 ? ? ? ? ? ? ? ? 7.200 ? 1.885 ? ? 0.081 0.030 0 12 1 0.997 ? 2.310 2.410 ? ? ? ? ? 1922 ? 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 7.200 ? 1.893 ? ? 0.072 0.027 0 13 1 0.998 ? 2.410 2.540 ? ? ? ? ? 1951 ? 100.000 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 7.200 ? 2.017 ? ? 0.065 0.024 0 14 1 0.998 ? 2.540 2.700 ? ? ? ? ? 1947 ? 100.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 7.100 ? 2.415 ? ? 0.066 0.025 0 15 1 0.998 ? 2.700 2.910 ? ? ? ? ? 1939 ? 100.000 ? ? ? ? 0.063 ? ? ? ? ? ? ? ? 7.000 ? 3.122 ? ? 0.068 0.026 0 16 1 0.997 ? 2.910 3.200 ? ? ? ? ? 1981 ? 100.000 ? ? ? ? 0.056 ? ? ? ? ? ? ? ? 6.700 ? 3.315 ? ? 0.061 0.023 0 17 1 0.997 ? 3.200 3.660 ? ? ? ? ? 1987 ? 100.000 ? ? ? ? 0.050 ? ? ? ? ? ? ? ? 6.800 ? 3.358 ? ? 0.054 0.021 0 18 1 0.997 ? 3.660 4.610 ? ? ? ? ? 1997 ? 99.600 ? ? ? ? 0.034 ? ? ? ? ? ? ? ? 6.600 ? 1.961 ? ? 0.037 0.014 0 19 1 0.999 ? 4.610 50.000 ? ? ? ? ? 2093 ? 97.400 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 6.600 ? 1.358 ? ? 0.029 0.011 0 20 1 0.999 ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5E71 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 38747 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.442 _refine.ls_d_res_high 1.700 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.2065 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2047 _refine.ls_R_factor_R_free 0.2395 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 1945 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.23 _refine.pdbx_overall_phase_error 26.12 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2599 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 175 _refine_hist.number_atoms_total 2774 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 34.442 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2656 'X-RAY DIFFRACTION' ? f_angle_d 1.027 ? ? 3577 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.976 ? ? 1010 'X-RAY DIFFRACTION' ? f_chiral_restr 0.043 ? ? 382 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 466 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.7004 1.7430 2574 0.2709 99.00 0.3181 . . 129 . . 'X-RAY DIFFRACTION' . 1.7430 1.7901 2599 0.2440 100.00 0.3221 . . 141 . . 'X-RAY DIFFRACTION' . 1.7901 1.8428 2590 0.2294 100.00 0.2818 . . 139 . . 'X-RAY DIFFRACTION' . 1.8428 1.9022 2582 0.2113 100.00 0.2673 . . 134 . . 'X-RAY DIFFRACTION' . 1.9022 1.9702 2585 0.2079 100.00 0.2508 . . 135 . . 'X-RAY DIFFRACTION' . 1.9702 2.0491 2621 0.2139 100.00 0.2827 . . 137 . . 'X-RAY DIFFRACTION' . 2.0491 2.1423 2598 0.2142 100.00 0.2629 . . 150 . . 'X-RAY DIFFRACTION' . 2.1423 2.2553 2624 0.2147 100.00 0.2621 . . 126 . . 'X-RAY DIFFRACTION' . 2.2553 2.3965 2638 0.2138 100.00 0.2813 . . 127 . . 'X-RAY DIFFRACTION' . 2.3965 2.5815 2612 0.2185 100.00 0.2393 . . 145 . . 'X-RAY DIFFRACTION' . 2.5815 2.8412 2647 0.2477 100.00 0.2947 . . 140 . . 'X-RAY DIFFRACTION' . 2.8412 3.2520 2692 0.2296 100.00 0.2375 . . 124 . . 'X-RAY DIFFRACTION' . 3.2520 4.0962 2689 0.1736 100.00 0.2257 . . 141 . . 'X-RAY DIFFRACTION' . 4.0962 34.4490 2751 0.1788 98.00 0.1965 . . 177 . . # _struct.entry_id 5E71 _struct.title 'Crystal structure of the archaeal tRNA m2G/m22G10 methyltransferase (aTrm11) from Thermococcus kodakarensis' _struct.pdbx_descriptor 'N2, N2-dimethylguanosine tRNA methyltransferase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5E71 _struct_keywords.text 'tRNA methyltransferase, RFM domain, NFLD, THUMP domain, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 10 ? GLY A 26 ? LEU A 10 GLY A 26 1 ? 17 HELX_P HELX_P2 AA2 GLY A 42 ? LYS A 44 ? GLY A 42 LYS A 44 5 ? 3 HELX_P HELX_P3 AA3 ALA A 45 ? ASP A 50 ? ALA A 45 ASP A 50 1 ? 6 HELX_P HELX_P4 AA4 SER A 67 ? GLU A 77 ? SER A 67 GLU A 77 1 ? 11 HELX_P HELX_P5 AA5 ASP A 102 ? ALA A 113 ? ASP A 102 ALA A 113 1 ? 12 HELX_P HELX_P6 AA6 ASP A 145 ? LYS A 151 ? ASP A 145 LYS A 151 1 ? 7 HELX_P HELX_P7 AA7 ARG A 152 ? ARG A 157 ? ARG A 152 ARG A 157 5 ? 6 HELX_P HELX_P8 AA8 HIS A 166 ? THR A 177 ? HIS A 166 THR A 177 1 ? 12 HELX_P HELX_P9 AA9 GLY A 191 ? LEU A 200 ? GLY A 191 LEU A 200 1 ? 10 HELX_P HELX_P10 AB1 ARG A 210 ? TYR A 224 ? ARG A 210 TYR A 224 1 ? 15 HELX_P HELX_P11 AB2 ASP A 235 ? THR A 237 ? ASP A 235 THR A 237 5 ? 3 HELX_P HELX_P12 AB3 ARG A 238 ? PHE A 243 ? ARG A 238 PHE A 243 1 ? 6 HELX_P HELX_P13 AB4 LYS A 267 ? VAL A 282 ? LYS A 267 VAL A 282 1 ? 16 HELX_P HELX_P14 AB5 ASN A 298 ? VAL A 306 ? ASN A 298 VAL A 306 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 96 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 131 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 96 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 131 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 3 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 28 ? ASP A 33 ? GLU A 28 ASP A 33 AA1 2 PHE A 36 ? ASP A 40 ? PHE A 36 ASP A 40 AA1 3 LEU A 2 ? ILE A 6 ? LEU A 2 ILE A 6 AA1 4 ALA A 55 ? ALA A 65 ? ALA A 55 ALA A 65 AA1 5 LEU A 135 ? TYR A 143 ? LEU A 135 TYR A 143 AA1 6 THR A 125 ? CYS A 131 ? THR A 125 CYS A 131 AA1 7 PHE A 86 ? THR A 92 ? PHE A 86 THR A 92 AA2 1 GLU A 182 ? ASP A 185 ? GLU A 182 ASP A 185 AA2 2 ARG A 203 ? ASP A 208 ? ARG A 203 ASP A 208 AA2 3 TYR A 229 ? LEU A 233 ? TYR A 229 LEU A 233 AA3 1 PHE A 248 ? THR A 253 ? PHE A 248 THR A 253 AA3 2 LEU A 283 ? PRO A 294 ? LEU A 283 PRO A 294 AA3 3 LEU A 322 ? GLU A 330 ? LEU A 322 GLU A 330 AA3 4 ARG A 309 ? HIS A 319 ? ARG A 309 HIS A 319 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 30 ? N ILE A 30 O LYS A 38 ? O LYS A 38 AA1 2 3 O LEU A 37 ? O LEU A 37 N VAL A 4 ? N VAL A 4 AA1 3 4 N GLU A 5 ? N GLU A 5 O HIS A 56 ? O HIS A 56 AA1 4 5 N ALA A 65 ? N ALA A 65 O LEU A 135 ? O LEU A 135 AA1 5 6 O TYR A 136 ? O TYR A 136 N TYR A 130 ? N TYR A 130 AA1 6 7 O VAL A 129 ? O VAL A 129 N GLU A 91 ? N GLU A 91 AA2 1 2 N ASP A 185 ? N ASP A 185 O TYR A 205 ? O TYR A 205 AA2 2 3 N GLY A 206 ? N GLY A 206 O LYS A 232 ? O LYS A 232 AA3 1 2 N VAL A 251 ? N VAL A 251 O ALA A 290 ? O ALA A 290 AA3 2 3 N LEU A 289 ? N LEU A 289 O PHE A 329 ? O PHE A 329 AA3 3 4 O VAL A 328 ? O VAL A 328 N LEU A 311 ? N LEU A 311 # _atom_sites.entry_id 5E71 _atom_sites.fract_transf_matrix[1][1] 0.020950 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018685 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007415 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 MET 93 93 93 MET MET A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 HIS 98 98 98 HIS HIS A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 CYS 131 131 131 CYS CYS A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 PRO 162 162 162 PRO PRO A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 HIS 166 166 166 HIS HIS A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 MET 188 188 188 MET MET A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 TYR 205 205 205 TYR TYR A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 MET 213 213 213 MET MET A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 HIS 223 223 223 HIS HIS A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ASP 228 228 228 ASP ASP A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 LYS 246 246 246 LYS LYS A . n A 1 247 LYS 247 247 247 LYS LYS A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 THR 253 253 253 THR THR A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 PRO 255 255 255 PRO PRO A . n A 1 256 PRO 256 256 256 PRO PRO A . n A 1 257 TYR 257 257 257 TYR TYR A . n A 1 258 GLY 258 258 ? ? ? A . n A 1 259 THR 259 259 ? ? ? A . n A 1 260 ALA 260 260 ? ? ? A . n A 1 261 ALA 261 261 ? ? ? A . n A 1 262 THR 262 262 ? ? ? A . n A 1 263 LEU 263 263 ? ? ? A . n A 1 264 ALA 264 264 ? ? ? A . n A 1 265 GLY 265 265 ? ? ? A . n A 1 266 ARG 266 266 266 ARG ARG A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ARG 268 268 268 ARG ARG A . n A 1 269 ASP 269 269 269 ASP ASP A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 TYR 272 272 272 TYR TYR A . n A 1 273 ARG 273 273 273 ARG ARG A . n A 1 274 LYS 274 274 274 LYS LYS A . n A 1 275 ALA 275 275 275 ALA ALA A . n A 1 276 LEU 276 276 276 LEU LEU A . n A 1 277 ARG 277 277 277 ARG ARG A . n A 1 278 SER 278 278 278 SER SER A . n A 1 279 ILE 279 279 279 ILE ILE A . n A 1 280 TYR 280 280 280 TYR TYR A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 LEU 283 283 283 LEU LEU A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 ASP 285 285 285 ASP ASP A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 ARG 288 288 288 ARG ARG A . n A 1 289 LEU 289 289 289 LEU LEU A . n A 1 290 ALA 290 290 290 ALA ALA A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 PHE 293 293 293 PHE PHE A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 THR 295 295 295 THR THR A . n A 1 296 ASP 296 296 296 ASP ASP A . n A 1 297 PHE 297 297 297 PHE PHE A . n A 1 298 ASN 298 298 298 ASN ASN A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 LYS 300 300 300 LYS LYS A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 GLU 302 302 302 GLU GLU A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 ALA 305 305 305 ALA ALA A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 GLY 307 307 307 GLY GLY A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 ARG 309 309 309 ARG ARG A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 GLY 312 312 312 GLY GLY A . n A 1 313 ARG 313 313 313 ARG ARG A . n A 1 314 TYR 314 314 314 TYR TYR A . n A 1 315 TYR 315 315 315 TYR TYR A . n A 1 316 GLN 316 316 316 GLN GLN A . n A 1 317 ARG 317 317 317 ARG ARG A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 HIS 319 319 319 HIS HIS A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 SER 321 321 321 SER SER A . n A 1 322 LEU 322 322 322 LEU LEU A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 ARG 324 324 324 ARG ARG A . n A 1 325 TYR 325 325 325 TYR TYR A . n A 1 326 PHE 326 326 326 PHE PHE A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 PHE 329 329 329 PHE PHE A . n A 1 330 GLU 330 330 330 GLU GLU A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 LEU 332 332 ? ? ? A . n A 1 333 GLU 333 333 ? ? ? A . n A 1 334 VAL 334 334 ? ? ? A . n A 1 335 LEU 335 335 ? ? ? A . n A 1 336 PHE 336 336 ? ? ? A . n A 1 337 GLN 337 337 ? ? ? A . n A 1 338 GLY 338 338 ? ? ? A . n A 1 339 PRO 339 339 ? ? ? A . n A 1 340 SER 340 340 ? ? ? A . n A 1 341 HIS 341 341 ? ? ? A . n A 1 342 HIS 342 342 ? ? ? A . n A 1 343 HIS 343 343 ? ? ? A . n A 1 344 HIS 344 344 ? ? ? A . n A 1 345 HIS 345 345 ? ? ? A . n A 1 346 HIS 346 346 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 401 155 HOH HOH A . B 2 HOH 2 402 153 HOH HOH A . B 2 HOH 3 403 35 HOH HOH A . B 2 HOH 4 404 18 HOH HOH A . B 2 HOH 5 405 22 HOH HOH A . B 2 HOH 6 406 83 HOH HOH A . B 2 HOH 7 407 166 HOH HOH A . B 2 HOH 8 408 175 HOH HOH A . B 2 HOH 9 409 89 HOH HOH A . B 2 HOH 10 410 66 HOH HOH A . B 2 HOH 11 411 108 HOH HOH A . B 2 HOH 12 412 149 HOH HOH A . B 2 HOH 13 413 118 HOH HOH A . B 2 HOH 14 414 154 HOH HOH A . B 2 HOH 15 415 17 HOH HOH A . B 2 HOH 16 416 143 HOH HOH A . B 2 HOH 17 417 36 HOH HOH A . B 2 HOH 18 418 40 HOH HOH A . B 2 HOH 19 419 71 HOH HOH A . B 2 HOH 20 420 122 HOH HOH A . B 2 HOH 21 421 100 HOH HOH A . B 2 HOH 22 422 59 HOH HOH A . B 2 HOH 23 423 121 HOH HOH A . B 2 HOH 24 424 117 HOH HOH A . B 2 HOH 25 425 93 HOH HOH A . B 2 HOH 26 426 170 HOH HOH A . B 2 HOH 27 427 50 HOH HOH A . B 2 HOH 28 428 112 HOH HOH A . B 2 HOH 29 429 70 HOH HOH A . B 2 HOH 30 430 24 HOH HOH A . B 2 HOH 31 431 96 HOH HOH A . B 2 HOH 32 432 109 HOH HOH A . B 2 HOH 33 433 33 HOH HOH A . B 2 HOH 34 434 30 HOH HOH A . B 2 HOH 35 435 49 HOH HOH A . B 2 HOH 36 436 68 HOH HOH A . B 2 HOH 37 437 9 HOH HOH A . B 2 HOH 38 438 91 HOH HOH A . B 2 HOH 39 439 115 HOH HOH A . B 2 HOH 40 440 67 HOH HOH A . B 2 HOH 41 441 20 HOH HOH A . B 2 HOH 42 442 10 HOH HOH A . B 2 HOH 43 443 43 HOH HOH A . B 2 HOH 44 444 13 HOH HOH A . B 2 HOH 45 445 27 HOH HOH A . B 2 HOH 46 446 37 HOH HOH A . B 2 HOH 47 447 74 HOH HOH A . B 2 HOH 48 448 106 HOH HOH A . B 2 HOH 49 449 126 HOH HOH A . B 2 HOH 50 450 85 HOH HOH A . B 2 HOH 51 451 42 HOH HOH A . B 2 HOH 52 452 119 HOH HOH A . B 2 HOH 53 453 32 HOH HOH A . B 2 HOH 54 454 4 HOH HOH A . B 2 HOH 55 455 31 HOH HOH A . B 2 HOH 56 456 105 HOH HOH A . B 2 HOH 57 457 127 HOH HOH A . B 2 HOH 58 458 44 HOH HOH A . B 2 HOH 59 459 61 HOH HOH A . B 2 HOH 60 460 55 HOH HOH A . B 2 HOH 61 461 102 HOH HOH A . B 2 HOH 62 462 12 HOH HOH A . B 2 HOH 63 463 94 HOH HOH A . B 2 HOH 64 464 21 HOH HOH A . B 2 HOH 65 465 88 HOH HOH A . B 2 HOH 66 466 75 HOH HOH A . B 2 HOH 67 467 14 HOH HOH A . B 2 HOH 68 468 125 HOH HOH A . B 2 HOH 69 469 34 HOH HOH A . B 2 HOH 70 470 45 HOH HOH A . B 2 HOH 71 471 86 HOH HOH A . B 2 HOH 72 472 58 HOH HOH A . B 2 HOH 73 473 19 HOH HOH A . B 2 HOH 74 474 90 HOH HOH A . B 2 HOH 75 475 176 HOH HOH A . B 2 HOH 76 476 39 HOH HOH A . B 2 HOH 77 477 51 HOH HOH A . B 2 HOH 78 478 48 HOH HOH A . B 2 HOH 79 479 165 HOH HOH A . B 2 HOH 80 480 111 HOH HOH A . B 2 HOH 81 481 114 HOH HOH A . B 2 HOH 82 482 144 HOH HOH A . B 2 HOH 83 483 47 HOH HOH A . B 2 HOH 84 484 147 HOH HOH A . B 2 HOH 85 485 77 HOH HOH A . B 2 HOH 86 486 97 HOH HOH A . B 2 HOH 87 487 84 HOH HOH A . B 2 HOH 88 488 107 HOH HOH A . B 2 HOH 89 489 87 HOH HOH A . B 2 HOH 90 490 5 HOH HOH A . B 2 HOH 91 491 116 HOH HOH A . B 2 HOH 92 492 52 HOH HOH A . B 2 HOH 93 493 62 HOH HOH A . B 2 HOH 94 494 124 HOH HOH A . B 2 HOH 95 495 25 HOH HOH A . B 2 HOH 96 496 81 HOH HOH A . B 2 HOH 97 497 159 HOH HOH A . B 2 HOH 98 498 123 HOH HOH A . B 2 HOH 99 499 63 HOH HOH A . B 2 HOH 100 500 95 HOH HOH A . B 2 HOH 101 501 57 HOH HOH A . B 2 HOH 102 502 3 HOH HOH A . B 2 HOH 103 503 23 HOH HOH A . B 2 HOH 104 504 29 HOH HOH A . B 2 HOH 105 505 2 HOH HOH A . B 2 HOH 106 506 54 HOH HOH A . B 2 HOH 107 507 79 HOH HOH A . B 2 HOH 108 508 69 HOH HOH A . B 2 HOH 109 509 46 HOH HOH A . B 2 HOH 110 510 177 HOH HOH A . B 2 HOH 111 511 1 HOH HOH A . B 2 HOH 112 512 41 HOH HOH A . B 2 HOH 113 513 130 HOH HOH A . B 2 HOH 114 514 137 HOH HOH A . B 2 HOH 115 515 76 HOH HOH A . B 2 HOH 116 516 64 HOH HOH A . B 2 HOH 117 517 104 HOH HOH A . B 2 HOH 118 518 16 HOH HOH A . B 2 HOH 119 519 98 HOH HOH A . B 2 HOH 120 520 60 HOH HOH A . B 2 HOH 121 521 15 HOH HOH A . B 2 HOH 122 522 56 HOH HOH A . B 2 HOH 123 523 28 HOH HOH A . B 2 HOH 124 524 99 HOH HOH A . B 2 HOH 125 525 113 HOH HOH A . B 2 HOH 126 526 26 HOH HOH A . B 2 HOH 127 527 178 HOH HOH A . B 2 HOH 128 528 142 HOH HOH A . B 2 HOH 129 529 110 HOH HOH A . B 2 HOH 130 530 157 HOH HOH A . B 2 HOH 131 531 8 HOH HOH A . B 2 HOH 132 532 134 HOH HOH A . B 2 HOH 133 533 11 HOH HOH A . B 2 HOH 134 534 38 HOH HOH A . B 2 HOH 135 535 6 HOH HOH A . B 2 HOH 136 536 7 HOH HOH A . B 2 HOH 137 537 133 HOH HOH A . B 2 HOH 138 538 169 HOH HOH A . B 2 HOH 139 539 53 HOH HOH A . B 2 HOH 140 540 82 HOH HOH A . B 2 HOH 141 541 132 HOH HOH A . B 2 HOH 142 542 145 HOH HOH A . B 2 HOH 143 543 131 HOH HOH A . B 2 HOH 144 544 151 HOH HOH A . B 2 HOH 145 545 168 HOH HOH A . B 2 HOH 146 546 101 HOH HOH A . B 2 HOH 147 547 103 HOH HOH A . B 2 HOH 148 548 146 HOH HOH A . B 2 HOH 149 549 179 HOH HOH A . B 2 HOH 150 550 158 HOH HOH A . B 2 HOH 151 551 78 HOH HOH A . B 2 HOH 152 552 167 HOH HOH A . B 2 HOH 153 553 129 HOH HOH A . B 2 HOH 154 554 80 HOH HOH A . B 2 HOH 155 555 72 HOH HOH A . B 2 HOH 156 556 173 HOH HOH A . B 2 HOH 157 557 136 HOH HOH A . B 2 HOH 158 558 174 HOH HOH A . B 2 HOH 159 559 150 HOH HOH A . B 2 HOH 160 560 92 HOH HOH A . B 2 HOH 161 561 156 HOH HOH A . B 2 HOH 162 562 141 HOH HOH A . B 2 HOH 163 563 138 HOH HOH A . B 2 HOH 164 564 120 HOH HOH A . B 2 HOH 165 565 140 HOH HOH A . B 2 HOH 166 566 73 HOH HOH A . B 2 HOH 167 567 164 HOH HOH A . B 2 HOH 168 568 152 HOH HOH A . B 2 HOH 169 569 65 HOH HOH A . B 2 HOH 170 570 128 HOH HOH A . B 2 HOH 171 571 139 HOH HOH A . B 2 HOH 172 572 172 HOH HOH A . B 2 HOH 173 573 148 HOH HOH A . B 2 HOH 174 574 135 HOH HOH A . B 2 HOH 175 575 171 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-06 2 'Structure model' 1 1 2020-02-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 2 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.700 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 38924 _diffrn_reflns.pdbx_Rmerge_I_obs 0.101 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 5.76 _diffrn_reflns.pdbx_redundancy 29.00 _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 100.00 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 1126901 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.66 50.00 ? ? 0.071 ? 10.001 27.70 ? 1 2.91 3.66 ? ? 0.100 ? 10.796 29.00 ? 1 2.54 2.91 ? ? 0.118 ? 8.275 29.30 ? 1 2.31 2.54 ? ? 0.132 ? 7.157 29.40 ? 1 2.14 2.31 ? ? 0.145 ? 6.231 29.50 ? 1 2.02 2.14 ? ? 0.160 ? 4.894 29.40 ? 1 1.91 2.02 ? ? 0.180 ? 3.610 29.30 ? 1 1.83 1.91 ? ? 0.212 ? 2.658 29.10 ? 1 1.76 1.83 ? ? 0.264 ? 1.883 28.80 ? 1 1.70 1.76 ? ? 0.338 ? 1.531 28.00 ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1682 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CG2 A ILE 291 ? ? O A HOH 555 ? ? 1.27 2 1 O A HOH 497 ? ? O A HOH 549 ? ? 1.93 3 1 O A HOH 527 ? ? O A HOH 550 ? ? 1.98 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 34 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 54.78 _pdbx_validate_torsion.psi -110.34 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 258 ? A GLY 258 2 1 Y 1 A THR 259 ? A THR 259 3 1 Y 1 A ALA 260 ? A ALA 260 4 1 Y 1 A ALA 261 ? A ALA 261 5 1 Y 1 A THR 262 ? A THR 262 6 1 Y 1 A LEU 263 ? A LEU 263 7 1 Y 1 A ALA 264 ? A ALA 264 8 1 Y 1 A GLY 265 ? A GLY 265 9 1 Y 1 A LEU 332 ? A LEU 332 10 1 Y 1 A GLU 333 ? A GLU 333 11 1 Y 1 A VAL 334 ? A VAL 334 12 1 Y 1 A LEU 335 ? A LEU 335 13 1 Y 1 A PHE 336 ? A PHE 336 14 1 Y 1 A GLN 337 ? A GLN 337 15 1 Y 1 A GLY 338 ? A GLY 338 16 1 Y 1 A PRO 339 ? A PRO 339 17 1 Y 1 A SER 340 ? A SER 340 18 1 Y 1 A HIS 341 ? A HIS 341 19 1 Y 1 A HIS 342 ? A HIS 342 20 1 Y 1 A HIS 343 ? A HIS 343 21 1 Y 1 A HIS 344 ? A HIS 344 22 1 Y 1 A HIS 345 ? A HIS 345 23 1 Y 1 A HIS 346 ? A HIS 346 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal KAKENHI Japan 15K06975 1 KAKENHI Japan 24770125 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #