HEADER VIRAL PROTEIN 12-OCT-15 5E7F TITLE COMPLEX BETWEEN LACTOCOCCAL PHAGE TUC2009 RBP HEAD DOMAIN AND A TITLE 2 NANOBODY (L06) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY L06; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MAJOR STRUCTURAL PROTEIN 1; COMPND 7 CHAIN: G, H, I; COMPND 8 FRAGMENT: HEAD DOMAIN, UNP RESIDUES 1-173; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: CLEAVED BY TRYPSIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 3 ORGANISM_COMMON: DROMEDARY; SOURCE 4 ORGANISM_TAXID: 9838; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: LACTOCOCCUS PHAGE TUC2009; SOURCE 9 ORGANISM_TAXID: 35241; SOURCE 10 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 1358 KEYWDS BACTERIOPHAGES, LACTOCOCCUS LACTIS, SIPHOVIRIDAE, RECEPTOR BINDING KEYWDS 2 PROTEIN, SINGLE-CHAIN NANOBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.LEGRAND,B.COLLINS,S.BLANGY,J.MURPHY,S.SPINELLI,C.GUTIERREZ, AUTHOR 2 N.RICHET,C.KELLENBERGER,A.DESMYTER,J.MAHONY,D.VAN SINDEREN, AUTHOR 3 C.CAMBILLAU REVDAT 5 10-JAN-24 5E7F 1 REMARK REVDAT 4 24-OCT-18 5E7F 1 SOURCE REVDAT 3 04-MAY-16 5E7F 1 JRNL REVDAT 2 10-FEB-16 5E7F 1 JRNL REVDAT 1 30-DEC-15 5E7F 0 JRNL AUTH P.LEGRAND,B.COLLINS,S.BLANGY,J.MURPHY,S.SPINELLI, JRNL AUTH 2 C.GUTIERREZ,N.RICHET,C.KELLENBERGER,A.DESMYTER,J.MAHONY, JRNL AUTH 3 D.VAN SINDEREN,C.CAMBILLAU JRNL TITL THE ATOMIC STRUCTURE OF THE PHAGE TUC2009 BASEPLATE TRIPOD JRNL TITL 2 SUGGESTS THAT HOST RECOGNITION INVOLVES TWO DIFFERENT JRNL TITL 3 CARBOHYDRATE BINDING MODULES. JRNL REF MBIO V. 7 01781 2016 JRNL REFN ESSN 2150-7511 JRNL PMID 26814179 JRNL DOI 10.1128/MBIO.01781-15 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1550 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.79 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2812 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2841 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2672 REMARK 3 BIN R VALUE (WORKING SET) : 0.2805 REMARK 3 BIN FREE R VALUE : 0.3565 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.98 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 140 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5816 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.57840 REMARK 3 B22 (A**2) : -21.10310 REMARK 3 B33 (A**2) : 36.68150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.395 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.457 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.240 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.464 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.244 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.888 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6009 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8167 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1945 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 135 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 902 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6009 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 776 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6765 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.63 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.29 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -47.3605 -22.1029 83.3477 REMARK 3 T TENSOR REMARK 3 T11: -0.0560 T22: -0.0968 REMARK 3 T33: -0.0652 T12: 0.0410 REMARK 3 T13: -0.0407 T23: 0.0594 REMARK 3 L TENSOR REMARK 3 L11: 1.2811 L22: 1.8985 REMARK 3 L33: 5.6786 L12: -0.3953 REMARK 3 L13: 0.2145 L23: -0.8261 REMARK 3 S TENSOR REMARK 3 S11: 0.0678 S12: 0.0813 S13: 0.1017 REMARK 3 S21: -0.1246 S22: -0.0673 S23: -0.0392 REMARK 3 S31: 0.1707 S32: 0.2417 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -10.2613 -51.8474 61.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.3917 T22: 0.0188 REMARK 3 T33: 0.0161 T12: 0.0995 REMARK 3 T13: 0.0464 T23: -0.0958 REMARK 3 L TENSOR REMARK 3 L11: 3.6205 L22: 5.2314 REMARK 3 L33: 4.0052 L12: -0.3522 REMARK 3 L13: -0.6375 L23: -0.0204 REMARK 3 S TENSOR REMARK 3 S11: -0.0092 S12: 0.1529 S13: -0.4724 REMARK 3 S21: -0.0675 S22: -0.0136 S23: -0.0739 REMARK 3 S31: 0.6601 S32: 0.1875 S33: 0.0229 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -36.0561 -69.6710 107.3430 REMARK 3 T TENSOR REMARK 3 T11: 0.0617 T22: -0.1783 REMARK 3 T33: -0.0760 T12: 0.0081 REMARK 3 T13: 0.0193 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 2.8300 L22: 2.3056 REMARK 3 L33: 4.4083 L12: 1.1649 REMARK 3 L13: -0.0917 L23: 0.3767 REMARK 3 S TENSOR REMARK 3 S11: -0.1193 S12: 0.2092 S13: 0.0671 REMARK 3 S21: -0.2211 S22: 0.0215 S23: -0.1819 REMARK 3 S31: -0.2817 S32: 0.1587 S33: 0.0979 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { G|* } REMARK 3 ORIGIN FOR THE GROUP (A): -26.0304 -35.7652 104.2550 REMARK 3 T TENSOR REMARK 3 T11: 0.0546 T22: -0.1315 REMARK 3 T33: -0.1527 T12: 0.0225 REMARK 3 T13: 0.0643 T23: 0.0463 REMARK 3 L TENSOR REMARK 3 L11: 3.9059 L22: 2.4607 REMARK 3 L33: 3.5313 L12: -0.2923 REMARK 3 L13: 0.2543 L23: -0.4223 REMARK 3 S TENSOR REMARK 3 S11: 0.0465 S12: -0.0415 S13: -0.0547 REMARK 3 S21: 0.1130 S22: -0.0331 S23: 0.0027 REMARK 3 S31: -0.2351 S32: 0.2767 S33: -0.0134 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { H|* } REMARK 3 ORIGIN FOR THE GROUP (A): -12.9847 -32.2385 88.6179 REMARK 3 T TENSOR REMARK 3 T11: -0.0330 T22: -0.0283 REMARK 3 T33: 0.0152 T12: -0.0597 REMARK 3 T13: 0.0643 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 0.9000 L22: 1.6246 REMARK 3 L33: 5.6689 L12: -0.8512 REMARK 3 L13: -0.9597 L23: 0.1550 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: -0.1378 S13: 0.0147 REMARK 3 S21: 0.1216 S22: -0.0402 S23: -0.1372 REMARK 3 S31: -0.1028 S32: 0.3797 S33: -0.0292 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { I|* } REMARK 3 ORIGIN FOR THE GROUP (A): -11.8926 -50.0618 99.0792 REMARK 3 T TENSOR REMARK 3 T11: 0.0542 T22: 0.0453 REMARK 3 T33: 0.0723 T12: 0.1803 REMARK 3 T13: 0.0799 T23: 0.0669 REMARK 3 L TENSOR REMARK 3 L11: 2.6208 L22: 3.1066 REMARK 3 L33: 3.4421 L12: 1.3586 REMARK 3 L13: -0.3292 L23: -0.2888 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: -0.1718 S13: -0.3259 REMARK 3 S21: 0.0114 S22: -0.1103 S23: -0.4734 REMARK 3 S31: 0.4311 S32: 0.2665 S33: 0.1796 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E7F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214482. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 - 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31023 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.14600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5EFB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MIXING 300 NL OF PROTEIN (10 MM HEPES, REMARK 280 PH 7.5, 150 MM NACL) WITH 100 NL PRECIPITANT SOLUTION (25-30 % REMARK 280 PEG4000, 0.2 M IMIDAZOLE PH 6.0, OR 0.1 M TRIS PH 8.0)., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.82500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.02000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.82500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.02000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 465 HIS A 131 REMARK 465 HIS A 132 REMARK 465 HIS A 133 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 465 HIS B 132 REMARK 465 HIS B 133 REMARK 465 HIS C 132 REMARK 465 HIS C 133 REMARK 465 MET G 1 REMARK 465 ALA G 2 REMARK 465 GLU G 3 REMARK 465 LEU G 4 REMARK 465 THR G 5 REMARK 465 LYS G 6 REMARK 465 ILE G 7 REMARK 465 THR G 8 REMARK 465 ARG G 9 REMARK 465 GLY G 10 REMARK 465 MET G 11 REMARK 465 GLN G 12 REMARK 465 ASN G 13 REMARK 465 GLY G 14 REMARK 465 ALA G 15 REMARK 465 GLU G 16 REMARK 465 THR G 17 REMARK 465 ILE G 18 REMARK 465 ASN G 19 REMARK 465 ASP G 20 REMARK 465 ASN G 21 REMARK 465 LEU G 22 REMARK 465 ASN G 23 REMARK 465 LYS G 24 REMARK 465 LEU G 25 REMARK 465 ASN G 26 REMARK 465 THR G 27 REMARK 465 ILE G 28 REMARK 465 THR G 29 REMARK 465 VAL G 30 REMARK 465 GLN G 31 REMARK 465 LYS G 32 REMARK 465 THR G 33 REMARK 465 GLY G 34 REMARK 465 ASP G 35 REMARK 465 GLU G 36 REMARK 465 THR G 37 REMARK 465 ILE G 38 REMARK 465 ALA G 39 REMARK 465 GLY G 40 REMARK 465 LYS G 41 REMARK 465 LYS G 42 REMARK 465 THR G 43 REMARK 465 PHE G 44 REMARK 465 SER G 45 REMARK 465 GLY G 46 REMARK 465 MET H 1 REMARK 465 ALA H 2 REMARK 465 GLU H 3 REMARK 465 LEU H 4 REMARK 465 THR H 5 REMARK 465 LYS H 6 REMARK 465 ILE H 7 REMARK 465 THR H 8 REMARK 465 ARG H 9 REMARK 465 GLY H 10 REMARK 465 MET H 11 REMARK 465 GLN H 12 REMARK 465 ASN H 13 REMARK 465 GLY H 14 REMARK 465 ALA H 15 REMARK 465 GLU H 16 REMARK 465 THR H 17 REMARK 465 ILE H 18 REMARK 465 ASN H 19 REMARK 465 ASP H 20 REMARK 465 ASN H 21 REMARK 465 LEU H 22 REMARK 465 ASN H 23 REMARK 465 LYS H 24 REMARK 465 LEU H 25 REMARK 465 ASN H 26 REMARK 465 THR H 27 REMARK 465 ILE H 28 REMARK 465 THR H 29 REMARK 465 VAL H 30 REMARK 465 GLN H 31 REMARK 465 LYS H 32 REMARK 465 THR H 33 REMARK 465 GLY H 34 REMARK 465 ASP H 35 REMARK 465 GLU H 36 REMARK 465 THR H 37 REMARK 465 ILE H 38 REMARK 465 ALA H 39 REMARK 465 GLY H 40 REMARK 465 LYS H 41 REMARK 465 LYS H 42 REMARK 465 THR H 43 REMARK 465 PHE H 44 REMARK 465 SER H 45 REMARK 465 GLY H 46 REMARK 465 MET I 1 REMARK 465 ALA I 2 REMARK 465 GLU I 3 REMARK 465 LEU I 4 REMARK 465 THR I 5 REMARK 465 LYS I 6 REMARK 465 ILE I 7 REMARK 465 THR I 8 REMARK 465 ARG I 9 REMARK 465 GLY I 10 REMARK 465 MET I 11 REMARK 465 GLN I 12 REMARK 465 ASN I 13 REMARK 465 GLY I 14 REMARK 465 ALA I 15 REMARK 465 GLU I 16 REMARK 465 THR I 17 REMARK 465 ILE I 18 REMARK 465 ASN I 19 REMARK 465 ASP I 20 REMARK 465 ASN I 21 REMARK 465 LEU I 22 REMARK 465 ASN I 23 REMARK 465 LYS I 24 REMARK 465 LEU I 25 REMARK 465 ASN I 26 REMARK 465 THR I 27 REMARK 465 ILE I 28 REMARK 465 THR I 29 REMARK 465 VAL I 30 REMARK 465 GLN I 31 REMARK 465 LYS I 32 REMARK 465 THR I 33 REMARK 465 GLY I 34 REMARK 465 ASP I 35 REMARK 465 GLU I 36 REMARK 465 THR I 37 REMARK 465 ILE I 38 REMARK 465 ALA I 39 REMARK 465 GLY I 40 REMARK 465 LYS I 41 REMARK 465 LYS I 42 REMARK 465 THR I 43 REMARK 465 PHE I 44 REMARK 465 SER I 45 REMARK 465 GLY I 46 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 117 -90.99 -105.63 REMARK 500 TRP B 117 -91.47 -105.12 REMARK 500 TRP C 117 -91.65 -104.56 REMARK 500 SER G 72 -60.83 80.60 REMARK 500 MET G 132 57.72 -147.48 REMARK 500 HIS G 163 59.14 39.19 REMARK 500 SER H 72 -60.97 80.83 REMARK 500 MET H 132 58.08 -146.62 REMARK 500 HIS H 163 59.08 39.51 REMARK 500 SER I 72 -61.42 80.08 REMARK 500 MET I 132 57.97 -146.64 REMARK 500 HIS I 163 58.83 39.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5E7B RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN DBREF 5E7F A 3 133 PDB 5E7F 5E7F 3 133 DBREF 5E7F B 3 133 PDB 5E7F 5E7F 3 133 DBREF 5E7F C 3 133 PDB 5E7F 5E7F 3 133 DBREF 5E7F G 1 173 UNP Q38610 Q38610_BPTU2 1 173 DBREF 5E7F H 1 173 UNP Q38610 Q38610_BPTU2 1 173 DBREF 5E7F I 1 173 UNP Q38610 Q38610_BPTU2 1 173 SEQADV 5E7F ALA G 174 UNP Q38610 EXPRESSION TAG SEQADV 5E7F ALA H 174 UNP Q38610 EXPRESSION TAG SEQADV 5E7F ALA I 174 UNP Q38610 EXPRESSION TAG SEQRES 1 A 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 A 131 ALA GLY GLY SER LEU ARG LEU SER CYS THR ALA SER GLY SEQRES 3 A 131 PHE THR PHE ASP ASP SER ASP MET GLY TRP TYR HIS GLN SEQRES 4 A 131 ALA PRO GLY ASN GLU CYS GLU LEU VAL SER ALA ILE PHE SEQRES 5 A 131 SER ASP GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 A 131 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 A 131 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 A 131 MET TYR TYR CYS ALA ALA ALA THR THR THR VAL ALA SER SEQRES 9 A 131 PRO PRO VAL ARG HIS VAL CYS ASN GLY TYR TRP GLY GLN SEQRES 10 A 131 GLY THR GLN VAL THR VAL SER SER HIS HIS HIS HIS HIS SEQRES 11 A 131 HIS SEQRES 1 B 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 B 131 ALA GLY GLY SER LEU ARG LEU SER CYS THR ALA SER GLY SEQRES 3 B 131 PHE THR PHE ASP ASP SER ASP MET GLY TRP TYR HIS GLN SEQRES 4 B 131 ALA PRO GLY ASN GLU CYS GLU LEU VAL SER ALA ILE PHE SEQRES 5 B 131 SER ASP GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 B 131 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 B 131 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 B 131 MET TYR TYR CYS ALA ALA ALA THR THR THR VAL ALA SER SEQRES 9 B 131 PRO PRO VAL ARG HIS VAL CYS ASN GLY TYR TRP GLY GLN SEQRES 10 B 131 GLY THR GLN VAL THR VAL SER SER HIS HIS HIS HIS HIS SEQRES 11 B 131 HIS SEQRES 1 C 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 C 131 ALA GLY GLY SER LEU ARG LEU SER CYS THR ALA SER GLY SEQRES 3 C 131 PHE THR PHE ASP ASP SER ASP MET GLY TRP TYR HIS GLN SEQRES 4 C 131 ALA PRO GLY ASN GLU CYS GLU LEU VAL SER ALA ILE PHE SEQRES 5 C 131 SER ASP GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 C 131 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 C 131 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 C 131 MET TYR TYR CYS ALA ALA ALA THR THR THR VAL ALA SER SEQRES 9 C 131 PRO PRO VAL ARG HIS VAL CYS ASN GLY TYR TRP GLY GLN SEQRES 10 C 131 GLY THR GLN VAL THR VAL SER SER HIS HIS HIS HIS HIS SEQRES 11 C 131 HIS SEQRES 1 G 174 MET ALA GLU LEU THR LYS ILE THR ARG GLY MET GLN ASN SEQRES 2 G 174 GLY ALA GLU THR ILE ASN ASP ASN LEU ASN LYS LEU ASN SEQRES 3 G 174 THR ILE THR VAL GLN LYS THR GLY ASP GLU THR ILE ALA SEQRES 4 G 174 GLY LYS LYS THR PHE SER GLY ASP VAL SER VAL ASP GLY SEQRES 5 G 174 ASP PHE THR MET LYS LYS PHE ALA ASP SER TYR VAL ALA SEQRES 6 G 174 PHE PHE ALA ASN LYS GLY SER GLY ASN THR VAL THR PHE SEQRES 7 G 174 THR ALA PRO TRP ASP CYS THR ALA GLU VAL GLU LEU PHE SEQRES 8 G 174 TYR HIS GLY TRP GLY TYR SER GLY GLY GLU TRP GLU ILE SEQRES 9 G 174 GLY ILE THR THR PRO SER GLY LEU THR GLN ILE TYR GLU SEQRES 10 G 174 ALA THR GLY TYR THR ASN GLY HIS ASP ASN GLN ALA ILE SEQRES 11 G 174 SER MET PRO THR LYS ALA ILE TYR SER GLY LEU LYS LYS SEQRES 12 G 174 GLY LEU GLN TYR THR PHE ASP ILE ARG ASP ALA ASN GLY SEQRES 13 G 174 ARG GLY GLY GLY PRO LYS HIS PRO MET MET ILE VAL LYS SEQRES 14 G 174 LEU TYR ARG ASN ALA SEQRES 1 H 174 MET ALA GLU LEU THR LYS ILE THR ARG GLY MET GLN ASN SEQRES 2 H 174 GLY ALA GLU THR ILE ASN ASP ASN LEU ASN LYS LEU ASN SEQRES 3 H 174 THR ILE THR VAL GLN LYS THR GLY ASP GLU THR ILE ALA SEQRES 4 H 174 GLY LYS LYS THR PHE SER GLY ASP VAL SER VAL ASP GLY SEQRES 5 H 174 ASP PHE THR MET LYS LYS PHE ALA ASP SER TYR VAL ALA SEQRES 6 H 174 PHE PHE ALA ASN LYS GLY SER GLY ASN THR VAL THR PHE SEQRES 7 H 174 THR ALA PRO TRP ASP CYS THR ALA GLU VAL GLU LEU PHE SEQRES 8 H 174 TYR HIS GLY TRP GLY TYR SER GLY GLY GLU TRP GLU ILE SEQRES 9 H 174 GLY ILE THR THR PRO SER GLY LEU THR GLN ILE TYR GLU SEQRES 10 H 174 ALA THR GLY TYR THR ASN GLY HIS ASP ASN GLN ALA ILE SEQRES 11 H 174 SER MET PRO THR LYS ALA ILE TYR SER GLY LEU LYS LYS SEQRES 12 H 174 GLY LEU GLN TYR THR PHE ASP ILE ARG ASP ALA ASN GLY SEQRES 13 H 174 ARG GLY GLY GLY PRO LYS HIS PRO MET MET ILE VAL LYS SEQRES 14 H 174 LEU TYR ARG ASN ALA SEQRES 1 I 174 MET ALA GLU LEU THR LYS ILE THR ARG GLY MET GLN ASN SEQRES 2 I 174 GLY ALA GLU THR ILE ASN ASP ASN LEU ASN LYS LEU ASN SEQRES 3 I 174 THR ILE THR VAL GLN LYS THR GLY ASP GLU THR ILE ALA SEQRES 4 I 174 GLY LYS LYS THR PHE SER GLY ASP VAL SER VAL ASP GLY SEQRES 5 I 174 ASP PHE THR MET LYS LYS PHE ALA ASP SER TYR VAL ALA SEQRES 6 I 174 PHE PHE ALA ASN LYS GLY SER GLY ASN THR VAL THR PHE SEQRES 7 I 174 THR ALA PRO TRP ASP CYS THR ALA GLU VAL GLU LEU PHE SEQRES 8 I 174 TYR HIS GLY TRP GLY TYR SER GLY GLY GLU TRP GLU ILE SEQRES 9 I 174 GLY ILE THR THR PRO SER GLY LEU THR GLN ILE TYR GLU SEQRES 10 I 174 ALA THR GLY TYR THR ASN GLY HIS ASP ASN GLN ALA ILE SEQRES 11 I 174 SER MET PRO THR LYS ALA ILE TYR SER GLY LEU LYS LYS SEQRES 12 I 174 GLY LEU GLN TYR THR PHE ASP ILE ARG ASP ALA ASN GLY SEQRES 13 I 174 ARG GLY GLY GLY PRO LYS HIS PRO MET MET ILE VAL LYS SEQRES 14 I 174 LEU TYR ARG ASN ALA FORMUL 7 HOH *40(H2 O) HELIX 1 AA1 ASN A 75 LYS A 77 5 3 HELIX 2 AA2 LYS A 88 THR A 92 5 5 HELIX 3 AA3 PRO A 108 CYS A 113 1 6 HELIX 4 AA4 ASN B 75 LYS B 77 5 3 HELIX 5 AA5 LYS B 88 THR B 92 5 5 HELIX 6 AA6 PRO B 108 CYS B 113 1 6 HELIX 7 AA7 ASN C 75 LYS C 77 5 3 HELIX 8 AA8 LYS C 88 THR C 92 5 5 HELIX 9 AA9 PRO C 108 CYS C 113 1 6 HELIX 10 AB1 SER G 49 PHE G 59 1 11 HELIX 11 AB2 SER H 49 PHE H 59 1 11 HELIX 12 AB3 SER I 49 PHE I 59 1 11 SHEET 1 AA1 4 GLN A 5 SER A 9 0 SHEET 2 AA1 4 LEU A 20 SER A 27 -1 O SER A 23 N SER A 9 SHEET 3 AA1 4 THR A 79 MET A 84 -1 O MET A 84 N LEU A 20 SHEET 4 AA1 4 PHE A 69 ASP A 74 -1 N THR A 70 O GLN A 83 SHEET 1 AA2 6 SER A 13 GLN A 15 0 SHEET 2 AA2 6 THR A 121 SER A 126 1 O SER A 126 N VAL A 14 SHEET 3 AA2 6 ALA A 93 ALA A 100 -1 N TYR A 95 O THR A 121 SHEET 4 AA2 6 ASP A 35 GLN A 41 -1 N TYR A 39 O TYR A 96 SHEET 5 AA2 6 GLU A 48 ILE A 53 -1 O ILE A 53 N MET A 36 SHEET 6 AA2 6 THR A 59 TYR A 61 -1 O TYR A 60 N ALA A 52 SHEET 1 AA3 4 GLN B 5 SER B 9 0 SHEET 2 AA3 4 LEU B 20 SER B 27 -1 O SER B 23 N SER B 9 SHEET 3 AA3 4 THR B 79 MET B 84 -1 O MET B 84 N LEU B 20 SHEET 4 AA3 4 PHE B 69 ASP B 74 -1 N THR B 70 O GLN B 83 SHEET 1 AA4 6 SER B 13 GLN B 15 0 SHEET 2 AA4 6 THR B 121 SER B 126 1 O SER B 126 N VAL B 14 SHEET 3 AA4 6 ALA B 93 ALA B 100 -1 N TYR B 95 O THR B 121 SHEET 4 AA4 6 ASP B 35 GLN B 41 -1 N TYR B 39 O TYR B 96 SHEET 5 AA4 6 GLU B 48 ILE B 53 -1 O ILE B 53 N MET B 36 SHEET 6 AA4 6 THR B 59 TYR B 61 -1 O TYR B 60 N ALA B 52 SHEET 1 AA5 4 GLN C 5 SER C 9 0 SHEET 2 AA5 4 LEU C 20 SER C 27 -1 O SER C 23 N SER C 9 SHEET 3 AA5 4 THR C 79 MET C 84 -1 O MET C 84 N LEU C 20 SHEET 4 AA5 4 PHE C 69 ASP C 74 -1 N THR C 70 O GLN C 83 SHEET 1 AA6 6 SER C 13 GLN C 15 0 SHEET 2 AA6 6 THR C 121 SER C 126 1 O SER C 126 N VAL C 14 SHEET 3 AA6 6 ALA C 93 ALA C 100 -1 N TYR C 95 O THR C 121 SHEET 4 AA6 6 ASP C 35 GLN C 41 -1 N TYR C 39 O TYR C 96 SHEET 5 AA6 6 GLU C 48 ILE C 53 -1 O ILE C 53 N MET C 36 SHEET 6 AA6 6 THR C 59 TYR C 61 -1 O TYR C 60 N ALA C 52 SHEET 1 AA7 5 VAL G 64 ALA G 68 0 SHEET 2 AA7 5 GLY G 158 ARG G 172 -1 O VAL G 168 N PHE G 67 SHEET 3 AA7 5 CYS G 84 GLY G 96 -1 N PHE G 91 O MET G 165 SHEET 4 AA7 5 THR G 134 LEU G 141 -1 O THR G 134 N LEU G 90 SHEET 5 AA7 5 THR G 113 ALA G 118 -1 N ALA G 118 O LYS G 135 SHEET 1 AA8 4 VAL G 64 ALA G 68 0 SHEET 2 AA8 4 GLY G 158 ARG G 172 -1 O VAL G 168 N PHE G 67 SHEET 3 AA8 4 CYS G 84 GLY G 96 -1 N PHE G 91 O MET G 165 SHEET 4 AA8 4 ILE G 130 SER G 131 -1 O ILE G 130 N GLY G 94 SHEET 1 AA9 2 VAL G 76 THR G 79 0 SHEET 2 AA9 2 GLN G 146 PHE G 149 -1 O TYR G 147 N PHE G 78 SHEET 1 AB1 3 GLY G 120 THR G 122 0 SHEET 2 AB1 3 TRP G 102 ILE G 106 -1 N ILE G 104 O GLY G 120 SHEET 3 AB1 3 ILE G 151 GLY G 156 -1 O ASN G 155 N GLU G 103 SHEET 1 AB2 5 VAL H 64 ALA H 68 0 SHEET 2 AB2 5 GLY H 158 ARG H 172 -1 O VAL H 168 N PHE H 67 SHEET 3 AB2 5 CYS H 84 GLY H 96 -1 N PHE H 91 O MET H 165 SHEET 4 AB2 5 THR H 134 LEU H 141 -1 O THR H 134 N LEU H 90 SHEET 5 AB2 5 THR H 113 ALA H 118 -1 N ALA H 118 O LYS H 135 SHEET 1 AB3 4 VAL H 64 ALA H 68 0 SHEET 2 AB3 4 GLY H 158 ARG H 172 -1 O VAL H 168 N PHE H 67 SHEET 3 AB3 4 CYS H 84 GLY H 96 -1 N PHE H 91 O MET H 165 SHEET 4 AB3 4 ILE H 130 SER H 131 -1 O ILE H 130 N GLY H 94 SHEET 1 AB4 2 VAL H 76 THR H 79 0 SHEET 2 AB4 2 GLN H 146 PHE H 149 -1 O TYR H 147 N PHE H 78 SHEET 1 AB5 3 GLY H 120 THR H 122 0 SHEET 2 AB5 3 TRP H 102 ILE H 106 -1 N ILE H 104 O GLY H 120 SHEET 3 AB5 3 ILE H 151 GLY H 156 -1 O ASN H 155 N GLU H 103 SHEET 1 AB6 5 VAL I 64 ALA I 68 0 SHEET 2 AB6 5 GLY I 158 ARG I 172 -1 O VAL I 168 N PHE I 67 SHEET 3 AB6 5 CYS I 84 GLY I 96 -1 N PHE I 91 O MET I 165 SHEET 4 AB6 5 THR I 134 LEU I 141 -1 O THR I 134 N LEU I 90 SHEET 5 AB6 5 THR I 113 ALA I 118 -1 N ALA I 118 O LYS I 135 SHEET 1 AB7 4 VAL I 64 ALA I 68 0 SHEET 2 AB7 4 GLY I 158 ARG I 172 -1 O VAL I 168 N PHE I 67 SHEET 3 AB7 4 CYS I 84 GLY I 96 -1 N PHE I 91 O MET I 165 SHEET 4 AB7 4 ILE I 130 SER I 131 -1 O ILE I 130 N GLY I 94 SHEET 1 AB8 2 VAL I 76 THR I 79 0 SHEET 2 AB8 2 GLN I 146 PHE I 149 -1 O TYR I 147 N PHE I 78 SHEET 1 AB9 3 GLY I 120 THR I 122 0 SHEET 2 AB9 3 TRP I 102 ILE I 106 -1 N ILE I 104 O GLY I 120 SHEET 3 AB9 3 ILE I 151 GLY I 156 -1 O ASN I 155 N GLU I 103 SSBOND 1 CYS A 24 CYS A 97 1555 1555 2.03 SSBOND 2 CYS A 47 CYS A 113 1555 1555 2.04 SSBOND 3 CYS B 24 CYS B 97 1555 1555 2.03 SSBOND 4 CYS B 47 CYS B 113 1555 1555 2.03 SSBOND 5 CYS C 24 CYS C 97 1555 1555 2.02 SSBOND 6 CYS C 47 CYS C 113 1555 1555 2.04 CRYST1 84.730 88.040 147.650 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011802 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011358 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006773 0.00000