HEADER TRANSFERASE 14-OCT-15 5E8K TITLE CRYSTAL STRUCTURE OF POLYPRENYL PYROPHOSPHATE SYNTHASE 2 FROM TITLE 2 ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GERANYLGERANYL PYROPHOSPHATE SYNTHASE 10, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GGPS10,(2E,6E)-FARNESYL DIPHOSPHATE SYNTHASE 10, COMPND 5 DIMETHYLALLYLTRANSTRANSFERASE 10,FARNESYL DIPHOSPHATE SYNTHASE 10, COMPND 6 FARNESYLTRANSTRANSFERASE 10,GERANYLTRANSTRANSFERASE 10; COMPND 7 EC: 2.5.1.-,2.5.1.1,2.5.1.29,2.5.1.10; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT3G20160, MAL21.19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPPPS2, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.WANG,Q.CHEN,D.FAN,J.LI,G.WANG,P.ZHANG REVDAT 3 20-MAR-24 5E8K 1 REMARK REVDAT 2 25-DEC-19 5E8K 1 JRNL REMARK LINK REVDAT 1 11-NOV-15 5E8K 0 JRNL AUTH C.WANG,Q.CHEN,D.FAN,J.LI,G.WANG,P.ZHANG JRNL TITL STRUCTURAL ANALYSES OF SHORT-CHAIN PRENYLTRANSFERASES JRNL TITL 2 IDENTIFY AN EVOLUTIONARILY CONSERVED GFPPS CLADE IN JRNL TITL 3 BRASSICACEAE PLANTS. JRNL REF MOL PLANT V. 9 195 2016 JRNL REFN ESSN 1752-9867 JRNL PMID 26537048 JRNL DOI 10.1016/J.MOLP.2015.10.010 REMARK 2 REMARK 2 RESOLUTION. 3.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 16306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0225 - 5.5002 0.98 2642 126 0.2042 0.2095 REMARK 3 2 5.5002 - 4.3665 1.00 2614 126 0.2274 0.2895 REMARK 3 3 4.3665 - 3.8148 1.00 2572 153 0.2185 0.2624 REMARK 3 4 3.8148 - 3.4661 1.00 2605 131 0.2491 0.2726 REMARK 3 5 3.4661 - 3.2177 1.00 2539 140 0.2763 0.2827 REMARK 3 6 3.2177 - 3.0280 0.97 2510 148 0.3316 0.3775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4169 REMARK 3 ANGLE : 1.965 5613 REMARK 3 CHIRALITY : 0.104 661 REMARK 3 PLANARITY : 0.009 720 REMARK 3 DIHEDRAL : 17.711 1578 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -44.4360 -16.4051 30.2630 REMARK 3 T TENSOR REMARK 3 T11: 0.7695 T22: 0.7005 REMARK 3 T33: 0.6432 T12: -0.0016 REMARK 3 T13: -0.0296 T23: -0.0901 REMARK 3 L TENSOR REMARK 3 L11: 2.9125 L22: 0.5525 REMARK 3 L33: 0.5820 L12: 0.3790 REMARK 3 L13: 0.8941 L23: -0.2203 REMARK 3 S TENSOR REMARK 3 S11: 0.1979 S12: -0.1717 S13: -0.3254 REMARK 3 S21: -0.0686 S22: -0.0418 S23: -0.1425 REMARK 3 S31: 0.1523 S32: -0.0534 S33: -0.1382 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16306 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% ISOPROPANOL, 8% PEG 4000, PH5.9, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 75.23000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.23000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.38400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 75.23000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.23000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.38400 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 75.23000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 75.23000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 37.38400 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 75.23000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 75.23000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 37.38400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 GLU A 170 REMARK 465 GLY A 171 REMARK 465 MET A 172 REMARK 465 ARG A 173 REMARK 465 PHE A 174 REMARK 465 ASP A 175 REMARK 465 SER A 176 REMARK 465 ASP A 177 REMARK 465 VAL A 236 REMARK 465 THR A 237 REMARK 465 LYS A 238 REMARK 465 SER A 239 REMARK 465 SER A 240 REMARK 465 GLU A 241 REMARK 465 GLU A 242 REMARK 465 LEU A 243 REMARK 465 GLY A 244 REMARK 465 LYS A 245 REMARK 465 THR A 246 REMARK 465 ALA A 247 REMARK 465 GLY A 248 REMARK 465 LYS A 249 REMARK 465 ASP A 250 REMARK 465 LEU A 251 REMARK 465 ILE A 252 REMARK 465 ALA A 253 REMARK 465 GLY A 254 REMARK 465 GLN A 304 REMARK 465 ASN A 305 REMARK 465 LEU A 306 REMARK 465 GLU A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 TYR B 7 REMARK 465 ASP B 8 REMARK 465 GLN B 163 REMARK 465 GLN B 164 REMARK 465 ALA B 165 REMARK 465 ASP B 166 REMARK 465 LEU B 167 REMARK 465 ILE B 188 REMARK 465 HIS B 189 REMARK 465 LYS B 190 REMARK 465 VAL B 236 REMARK 465 THR B 237 REMARK 465 LYS B 238 REMARK 465 SER B 239 REMARK 465 SER B 240 REMARK 465 GLU B 241 REMARK 465 GLU B 242 REMARK 465 LEU B 243 REMARK 465 GLY B 244 REMARK 465 LYS B 245 REMARK 465 THR B 246 REMARK 465 ALA B 247 REMARK 465 GLY B 248 REMARK 465 LYS B 249 REMARK 465 ASP B 250 REMARK 465 LEU B 251 REMARK 465 ILE B 252 REMARK 465 ALA B 253 REMARK 465 GLY B 254 REMARK 465 GLN B 304 REMARK 465 ASN B 305 REMARK 465 LEU B 306 REMARK 465 GLU B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 465 HIS B 312 REMARK 465 HIS B 313 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG B 33 CD1 LEU B 37 1.47 REMARK 500 OG SER B 49 NH2 ARG B 103 1.49 REMARK 500 O VAL B 129 CG2 THR B 133 1.62 REMARK 500 N TYR B 258 CD PRO B 259 1.79 REMARK 500 O LYS B 10 O SER B 13 1.88 REMARK 500 O LYS B 10 N SER B 13 1.96 REMARK 500 O THR A 132 OG SER A 135 1.99 REMARK 500 CB ASP B 175 CD1 LEU B 180 2.04 REMARK 500 O GLN B 130 N SER B 134 2.06 REMARK 500 CG ASP B 175 CD1 LEU B 180 2.12 REMARK 500 OE1 GLU B 214 NH1 ARG B 217 2.12 REMARK 500 OG1 THR B 257 CD PRO B 259 2.14 REMARK 500 OG1 THR B 257 CG PRO B 259 2.17 REMARK 500 O GLU A 36 N ILE A 39 2.18 REMARK 500 O GLU A 265 N LYS A 268 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY B 171 CE MET B 262 2455 1.91 REMARK 500 OE2 GLU B 181 OH TYR B 270 2455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 9 CB - CA - C ANGL. DEV. = -14.4 DEGREES REMARK 500 MET A 96 CB - CA - C ANGL. DEV. = -20.8 DEGREES REMARK 500 MET A 96 N - CA - C ANGL. DEV. = 36.1 DEGREES REMARK 500 PRO A 142 C - N - CD ANGL. DEV. = -14.9 DEGREES REMARK 500 GLU B 36 N - CA - C ANGL. DEV. = -22.6 DEGREES REMARK 500 LYS B 105 CB - CA - C ANGL. DEV. = 26.8 DEGREES REMARK 500 PRO B 106 C - N - CA ANGL. DEV. = -22.1 DEGREES REMARK 500 PRO B 106 C - N - CD ANGL. DEV. = 21.8 DEGREES REMARK 500 SER B 134 N - CA - C ANGL. DEV. = -21.9 DEGREES REMARK 500 SER B 135 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 PRO B 259 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 10 -51.58 73.65 REMARK 500 GLU A 36 22.53 80.07 REMARK 500 ARG A 53 48.04 -82.55 REMARK 500 LEU A 93 136.20 -39.68 REMARK 500 ASN A 98 71.54 57.53 REMARK 500 ALA A 168 48.32 -154.61 REMARK 500 ASP A 288 -64.70 -95.99 REMARK 500 TYR B 14 -52.77 74.18 REMARK 500 LEU B 48 46.28 -108.01 REMARK 500 MET B 96 -157.04 -108.01 REMARK 500 ARG B 103 -62.06 67.26 REMARK 500 PHE B 137 -122.44 54.81 REMARK 500 MET B 172 136.41 -170.21 REMARK 500 SER B 176 -7.52 80.51 REMARK 500 THR B 257 -157.30 -112.04 REMARK 500 ARG B 260 -62.95 70.87 REMARK 500 MET B 262 -134.12 56.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5E8H RELATED DB: PDB REMARK 900 RELATED ID: 5E8L RELATED DB: PDB DBREF 5E8K A 2 305 UNP Q9LJY2 GGPPA_ARATH 41 344 DBREF 5E8K B 2 305 UNP Q9LJY2 GGPPA_ARATH 41 344 SEQADV 5E8K MET A 1 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K LEU A 306 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K GLU A 307 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 308 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 309 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 310 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 311 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 312 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS A 313 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K MET B 1 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K LEU B 306 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K GLU B 307 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 308 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 309 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 310 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 311 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 312 UNP Q9LJY2 EXPRESSION TAG SEQADV 5E8K HIS B 313 UNP Q9LJY2 EXPRESSION TAG SEQRES 1 A 313 MET THR SER ALA ALA SER TYR ASP PHE LYS PHE MET SER SEQRES 2 A 313 TYR MET VAL ASN LYS ALA LYS SER VAL ASN LYS ALA LEU SEQRES 3 A 313 GLU GLU ALA VAL PRO LEU ARG GLU PRO GLU LEU LYS ILE SEQRES 4 A 313 ARG GLU ALA MET ARG TYR THR LEU LEU SER ASP GLY LYS SEQRES 5 A 313 ARG VAL ARG PRO MET LEU CYS LEU ALA ALA CYS GLU LEU SEQRES 6 A 313 VAL GLY GLY GLN GLU SER THR ALA MET SER ALA ALA CYS SEQRES 7 A 313 ALA ILE GLU MET LEU HIS ALA SER SER LEU ILE LEU ASP SEQRES 8 A 313 ASP LEU PRO CYS MET ASP ASN ASP SER LEU ARG ARG GLY SEQRES 9 A 313 LYS PRO THR ASN HIS ILE VAL PHE GLY GLU SER ILE ALA SEQRES 10 A 313 ILE LEU ALA SER GLN ALA LEU ILE ALA LEU ALA VAL GLN SEQRES 11 A 313 LYS THR THR SER SER THR PHE ALA ASP VAL PRO PRO GLU SEQRES 12 A 313 ARG ILE LEU LYS THR VAL GLN GLU MET VAL LYS ALA VAL SEQRES 13 A 313 GLU GLY LEU VAL ALA GLY GLN GLN ALA ASP LEU ALA GLY SEQRES 14 A 313 GLU GLY MET ARG PHE ASP SER ASP THR GLY LEU GLU HIS SEQRES 15 A 313 LEU GLU PHE ILE HIS ILE HIS LYS THR ALA ALA LEU LEU SEQRES 16 A 313 GLU ALA ALA ALA VAL MET GLY ALA ILE MET GLY GLY GLY SEQRES 17 A 313 SER ASP GLU GLU ILE GLU ARG LEU ARG SER TYR ALA ARG SEQRES 18 A 313 CYS ILE GLY LEU MET PHE GLN VAL VAL ASP ASP VAL LEU SEQRES 19 A 313 ASP VAL THR LYS SER SER GLU GLU LEU GLY LYS THR ALA SEQRES 20 A 313 GLY LYS ASP LEU ILE ALA GLY LYS LEU THR TYR PRO ARG SEQRES 21 A 313 LEU MET GLY VAL GLU LYS SER LYS GLU TYR ALA GLU ARG SEQRES 22 A 313 LEU ASN ILE GLU ALA ARG GLU HIS LEU LEU GLY PHE ASP SEQRES 23 A 313 ILE ASP LYS VAL ALA PRO LEU VAL SER LEU ALA ASP TYR SEQRES 24 A 313 ILE VAL ASN ARG GLN ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 25 A 313 HIS SEQRES 1 B 313 MET THR SER ALA ALA SER TYR ASP PHE LYS PHE MET SER SEQRES 2 B 313 TYR MET VAL ASN LYS ALA LYS SER VAL ASN LYS ALA LEU SEQRES 3 B 313 GLU GLU ALA VAL PRO LEU ARG GLU PRO GLU LEU LYS ILE SEQRES 4 B 313 ARG GLU ALA MET ARG TYR THR LEU LEU SER ASP GLY LYS SEQRES 5 B 313 ARG VAL ARG PRO MET LEU CYS LEU ALA ALA CYS GLU LEU SEQRES 6 B 313 VAL GLY GLY GLN GLU SER THR ALA MET SER ALA ALA CYS SEQRES 7 B 313 ALA ILE GLU MET LEU HIS ALA SER SER LEU ILE LEU ASP SEQRES 8 B 313 ASP LEU PRO CYS MET ASP ASN ASP SER LEU ARG ARG GLY SEQRES 9 B 313 LYS PRO THR ASN HIS ILE VAL PHE GLY GLU SER ILE ALA SEQRES 10 B 313 ILE LEU ALA SER GLN ALA LEU ILE ALA LEU ALA VAL GLN SEQRES 11 B 313 LYS THR THR SER SER THR PHE ALA ASP VAL PRO PRO GLU SEQRES 12 B 313 ARG ILE LEU LYS THR VAL GLN GLU MET VAL LYS ALA VAL SEQRES 13 B 313 GLU GLY LEU VAL ALA GLY GLN GLN ALA ASP LEU ALA GLY SEQRES 14 B 313 GLU GLY MET ARG PHE ASP SER ASP THR GLY LEU GLU HIS SEQRES 15 B 313 LEU GLU PHE ILE HIS ILE HIS LYS THR ALA ALA LEU LEU SEQRES 16 B 313 GLU ALA ALA ALA VAL MET GLY ALA ILE MET GLY GLY GLY SEQRES 17 B 313 SER ASP GLU GLU ILE GLU ARG LEU ARG SER TYR ALA ARG SEQRES 18 B 313 CYS ILE GLY LEU MET PHE GLN VAL VAL ASP ASP VAL LEU SEQRES 19 B 313 ASP VAL THR LYS SER SER GLU GLU LEU GLY LYS THR ALA SEQRES 20 B 313 GLY LYS ASP LEU ILE ALA GLY LYS LEU THR TYR PRO ARG SEQRES 21 B 313 LEU MET GLY VAL GLU LYS SER LYS GLU TYR ALA GLU ARG SEQRES 22 B 313 LEU ASN ILE GLU ALA ARG GLU HIS LEU LEU GLY PHE ASP SEQRES 23 B 313 ILE ASP LYS VAL ALA PRO LEU VAL SER LEU ALA ASP TYR SEQRES 24 B 313 ILE VAL ASN ARG GLN ASN LEU GLU HIS HIS HIS HIS HIS SEQRES 25 B 313 HIS HELIX 1 AA1 LYS A 10 VAL A 30 1 21 HELIX 2 AA2 GLU A 36 LEU A 48 1 13 HELIX 3 AA3 ARG A 53 VAL A 66 1 14 HELIX 4 AA4 GLN A 69 THR A 72 5 4 HELIX 5 AA5 ALA A 73 LEU A 93 1 21 HELIX 6 AA6 ASN A 108 VAL A 111 5 4 HELIX 7 AA7 PHE A 112 SER A 134 1 23 HELIX 8 AA8 PRO A 142 ASP A 166 1 25 HELIX 9 AA9 HIS A 182 GLY A 207 1 26 HELIX 10 AB1 SER A 209 LEU A 234 1 26 HELIX 11 AB2 THR A 257 GLY A 263 1 7 HELIX 12 AB3 GLY A 263 HIS A 281 1 19 HELIX 13 AB4 VAL A 290 ASN A 302 1 13 HELIX 14 AB5 PHE B 11 VAL B 30 1 20 HELIX 15 AB6 LEU B 37 LEU B 48 1 12 HELIX 16 AB7 ARG B 53 VAL B 66 1 14 HELIX 17 AB8 GLN B 69 THR B 72 5 4 HELIX 18 AB9 ALA B 73 ASP B 92 1 20 HELIX 19 AC1 THR B 107 GLY B 113 1 7 HELIX 20 AC2 GLY B 113 SER B 134 1 22 HELIX 21 AC3 PRO B 141 GLY B 162 1 22 HELIX 22 AC4 ALA B 192 GLY B 206 1 15 HELIX 23 AC5 SER B 209 LEU B 234 1 26 HELIX 24 AC6 GLY B 263 LEU B 282 1 20 HELIX 25 AC7 VAL B 290 ASN B 302 1 13 SHEET 1 AA1 2 LEU A 101 ARG A 102 0 SHEET 2 AA1 2 LYS A 105 PRO A 106 -1 O LYS A 105 N ARG A 102 CISPEP 1 GLU A 34 PRO A 35 0 0.07 CISPEP 2 GLY A 51 LYS A 52 0 0.96 CISPEP 3 PRO B 35 GLU B 36 0 -7.00 CISPEP 4 ASP B 177 THR B 178 0 2.78 CRYST1 150.460 150.460 74.768 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006646 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006646 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013375 0.00000