HEADER IMMUNE SYSTEM 15-OCT-15 5EA0 TITLE STRUCTURE OF THE ANTIBODY 7968 WITH HUMAN COMPLEMENT FACTOR H-DERIVED TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY CHAIN OF ANTIBODY 7968 FAB FRAGMENT; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIGHT CHAIN OF ANTIBODY 7968 FAB FRAGMENT; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: COMPLEMENT FACTOR H-RELATED PROTEIN 2; COMPND 11 CHAIN: P; COMPND 12 FRAGMENT: UNP RESIDUES 150-162; COMPND 13 SYNONYM: FHR-2,DDESK59,H FACTOR-LIKE 3,H FACTOR-LIKE PROTEIN 2; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: THE PEPTIDE WAS N-TERMINALLY ACETYLATED AND C- COMPND 16 TERMINALLY AMIDATED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606 KEYWDS COMPLEMENT FACTOR H CFH SCR19 SCR19-20, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.T.BUSHEY,M.A.MOODY,N.I.NICELY,S.M.ALAM,B.F.HAYNES,M.T.WINKLER, AUTHOR 2 E.B.GOTTLIN,M.J.CAMPA,H.-X.LIAO,E.F.PATZ JR. REVDAT 4 27-SEP-23 5EA0 1 REMARK REVDAT 3 24-MAR-21 5EA0 1 SOURCE REMARK REVDAT 2 01-JUN-16 5EA0 1 JRNL REVDAT 1 25-MAY-16 5EA0 0 JRNL AUTH R.T.BUSHEY,M.A.MOODY,N.L.NICELY,B.F.HAYNES,S.M.ALAM, JRNL AUTH 2 S.T.KEIR,R.C.BENTLEY,K.ROY CHOUDHURY,E.B.GOTTLIN,M.J.CAMPA, JRNL AUTH 3 H.X.LIAO,E.F.PATZ JRNL TITL A THERAPEUTIC ANTIBODY FOR CANCER, DERIVED FROM SINGLE HUMAN JRNL TITL 2 B CELLS. JRNL REF CELL REP V. 15 1505 2016 JRNL REFN ESSN 2211-1247 JRNL PMID 27160908 JRNL DOI 10.1016/J.CELREP.2016.04.038 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 26663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1918 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0163 - 4.8131 1.00 2110 160 0.1357 0.1796 REMARK 3 2 4.8131 - 3.8214 0.84 1728 129 0.1301 0.1855 REMARK 3 3 3.8214 - 3.3387 0.72 1489 114 0.1727 0.2408 REMARK 3 4 3.3387 - 3.0336 1.00 2033 163 0.1925 0.2774 REMARK 3 5 3.0336 - 2.8162 0.99 2025 155 0.2132 0.3021 REMARK 3 6 2.8162 - 2.6502 0.98 2024 143 0.2212 0.2879 REMARK 3 7 2.6502 - 2.5175 0.96 1964 150 0.2137 0.3314 REMARK 3 8 2.5175 - 2.4080 0.96 1964 154 0.2201 0.3096 REMARK 3 9 2.4080 - 2.3153 0.96 1923 153 0.2402 0.3126 REMARK 3 10 2.3153 - 2.2354 0.52 1039 86 0.3768 0.5329 REMARK 3 11 2.2354 - 2.1655 0.54 1122 81 0.2667 0.4080 REMARK 3 12 2.1655 - 2.1036 0.92 1860 147 0.2298 0.3086 REMARK 3 13 2.1036 - 2.0482 0.88 1779 140 0.2343 0.3126 REMARK 3 14 2.0482 - 2.0000 0.83 1685 143 0.2477 0.3747 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3464 REMARK 3 ANGLE : 1.256 4707 REMARK 3 CHIRALITY : 0.045 525 REMARK 3 PLANARITY : 0.006 605 REMARK 3 DIHEDRAL : 14.885 1246 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN H AND RESID 1:12) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7564 -16.7244 -6.6235 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.2024 REMARK 3 T33: 0.1106 T12: -0.0198 REMARK 3 T13: 0.0080 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 7.6856 L22: 4.4929 REMARK 3 L33: 1.0329 L12: -4.2152 REMARK 3 L13: 2.5118 L23: -1.7849 REMARK 3 S TENSOR REMARK 3 S11: 0.1276 S12: 0.1349 S13: -0.1383 REMARK 3 S21: 0.0056 S22: -0.1954 S23: 0.1287 REMARK 3 S31: 0.1395 S32: 0.0878 S33: -0.0040 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN H AND RESID 13:116) REMARK 3 ORIGIN FOR THE GROUP (A): -26.2042 -9.5635 0.2860 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.1458 REMARK 3 T33: 0.1711 T12: -0.0038 REMARK 3 T13: 0.0042 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.1091 L22: 0.9497 REMARK 3 L33: 0.7522 L12: -0.4010 REMARK 3 L13: 0.4371 L23: 0.0453 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: -0.0060 S13: -0.0646 REMARK 3 S21: 0.1963 S22: 0.0002 S23: -0.0307 REMARK 3 S31: 0.0255 S32: -0.0459 S33: 0.0355 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN H AND RESID 117:190) REMARK 3 ORIGIN FOR THE GROUP (A): -34.0224 -13.2124 -28.7306 REMARK 3 T TENSOR REMARK 3 T11: 0.1658 T22: 0.1297 REMARK 3 T33: 0.1779 T12: 0.0222 REMARK 3 T13: 0.0241 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.8593 L22: 0.5462 REMARK 3 L33: 0.5983 L12: -0.1499 REMARK 3 L13: -0.0053 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.0097 S12: 0.0331 S13: -0.0533 REMARK 3 S21: -0.0946 S22: -0.0056 S23: -0.0581 REMARK 3 S31: 0.0973 S32: 0.0190 S33: -0.0121 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN H AND RESID 191:216) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9884 -22.1789 -29.3839 REMARK 3 T TENSOR REMARK 3 T11: 0.2306 T22: 0.2238 REMARK 3 T33: 0.1509 T12: 0.0046 REMARK 3 T13: 0.0017 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.6703 L22: 2.2697 REMARK 3 L33: 1.1805 L12: -0.4637 REMARK 3 L13: -0.7487 L23: 1.0424 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: 0.3087 S13: -0.1103 REMARK 3 S21: -0.1780 S22: 0.0380 S23: -0.0511 REMARK 3 S31: 0.3865 S32: -0.2354 S33: -0.0449 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN L AND RESID 1:27A) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9858 4.2336 -12.7651 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.1834 REMARK 3 T33: 0.1778 T12: -0.0111 REMARK 3 T13: 0.0043 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.6087 L22: 1.0592 REMARK 3 L33: 4.9045 L12: -0.1728 REMARK 3 L13: -0.7459 L23: 1.4354 REMARK 3 S TENSOR REMARK 3 S11: 0.0884 S12: 0.0433 S13: 0.0272 REMARK 3 S21: 0.0501 S22: 0.0948 S23: -0.0836 REMARK 3 S31: -0.1153 S32: 0.0300 S33: -0.2577 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN L AND RESID 27B:105) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7302 -4.4062 -8.6246 REMARK 3 T TENSOR REMARK 3 T11: 0.1447 T22: 0.1757 REMARK 3 T33: 0.1734 T12: -0.0135 REMARK 3 T13: -0.0078 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.8642 L22: 0.8190 REMARK 3 L33: 0.9113 L12: -0.1402 REMARK 3 L13: -0.4722 L23: 0.0818 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: -0.0827 S13: -0.0089 REMARK 3 S21: -0.0154 S22: 0.0499 S23: -0.1271 REMARK 3 S31: 0.0641 S32: 0.0339 S33: -0.0780 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN L AND RESID 106:175) REMARK 3 ORIGIN FOR THE GROUP (A): -29.9497 -3.7596 -36.4731 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.1245 REMARK 3 T33: 0.1469 T12: 0.0069 REMARK 3 T13: 0.0063 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.2848 L22: 0.1739 REMARK 3 L33: 1.0395 L12: -0.2990 REMARK 3 L13: 0.5297 L23: -0.0728 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: 0.0540 S13: -0.0452 REMARK 3 S21: -0.0052 S22: -0.0252 S23: -0.0379 REMARK 3 S31: 0.0713 S32: 0.0160 S33: 0.0098 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN L AND RESID 176:213) REMARK 3 ORIGIN FOR THE GROUP (A): -37.8464 -2.6904 -43.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.1741 REMARK 3 T33: 0.1764 T12: -0.0145 REMARK 3 T13: -0.0243 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.7847 L22: 1.0444 REMARK 3 L33: 1.2150 L12: 0.2356 REMARK 3 L13: 0.1216 L23: -0.1148 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.1938 S13: 0.0930 REMARK 3 S21: -0.2351 S22: -0.0730 S23: 0.1384 REMARK 3 S31: 0.0869 S32: -0.0762 S33: 0.0451 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN P AND RESID 1112:1122) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3441 -7.5096 10.1487 REMARK 3 T TENSOR REMARK 3 T11: 0.2623 T22: 0.2849 REMARK 3 T33: 0.1873 T12: -0.0228 REMARK 3 T13: -0.0619 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 2.2231 L22: 5.4971 REMARK 3 L33: 0.6146 L12: 3.4801 REMARK 3 L13: 0.2647 L23: 0.5869 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: -0.1452 S13: 0.0088 REMARK 3 S21: 0.2352 S22: -0.0383 S23: -0.0545 REMARK 3 S31: -0.0735 S32: 0.0014 S33: 0.0524 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EA0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28263 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1NL0, 3QOS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP COMPOSED OF FAB AT 20 MG/ML MIXED REMARK 280 WITH 25 MM CITRIC ACID PH 3.5, 8% PEG 3350; OVER A RESERVOIR OF REMARK 280 24% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.77350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 130 REMARK 465 LYS H 131 REMARK 465 SER H 132 REMARK 465 THR H 133 REMARK 465 SER H 134 REMARK 465 GLY H 135 REMARK 465 SER H 217 REMARK 465 CYS H 218 REMARK 465 ASP H 219 REMARK 465 LYS H 220 REMARK 465 CYS L 214 REMARK 465 ACE P 1109 REMARK 465 GLY P 1110 REMARK 465 PRO P 1111 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU L 161 O HOH L 301 2.00 REMARK 500 OG SER L 127 O HOH L 302 2.03 REMARK 500 O GLU L 213 O HOH L 303 2.04 REMARK 500 O HOH H 415 O HOH H 453 2.07 REMARK 500 O HOH L 356 O HOH L 448 2.10 REMARK 500 O HOH H 453 O HOH L 419 2.11 REMARK 500 O HOH L 419 O HOH L 454 2.14 REMARK 500 O HOH L 359 O HOH L 432 2.14 REMARK 500 OH TYR H 178 O HOH H 301 2.15 REMARK 500 NZ LYS H 203 O HOH H 302 2.17 REMARK 500 O HOH L 465 O HOH L 468 2.18 REMARK 500 OE1 GLU L 81 O HOH L 304 2.18 REMARK 500 N ASP L 1 O HOH L 305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 308 O HOH L 432 1656 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA H 98 C - N - CA ANGL. DEV. = 16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA H 88 163.71 179.48 REMARK 500 ALA H 98 -74.30 129.01 REMARK 500 ALA H 100 54.47 -67.09 REMARK 500 SER H 115 58.05 -90.56 REMARK 500 PRO H 128 -157.06 -70.09 REMARK 500 ALA L 51 -43.89 70.33 REMARK 500 ASN L 152 -2.26 77.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 5EA0 H 1 220 PDB 5EA0 5EA0 1 220 DBREF 5EA0 L 1 214 PDB 5EA0 5EA0 1 214 DBREF 5EA0 P 1110 1122 UNP P36980 FHR2_HUMAN 150 162 SEQADV 5EA0 ACE P 1109 UNP P36980 ACETYLATION SEQADV 5EA0 NH2 P 1123 UNP P36980 AMIDATION SEQRES 1 H 224 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 224 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 224 PHE THR PHE SER ARG TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 H 224 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL MET SER SEQRES 5 H 224 TYR ASP GLY SER THR LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 224 GLY ARG PHE ALA ILE SER ARG ASP ASN PRO LYS ASN THR SEQRES 7 H 224 LEU PHE LEU GLN MET ASN SER LEU ARG PRO ASP ASP THR SEQRES 8 H 224 ALA VAL TYR TYR CYS ALA LYS GLY GLY ALA ALA ALA ALA SEQRES 9 H 224 VAL MET ASP VAL TRP GLY LYS GLY THR THR VAL THR VAL SEQRES 10 H 224 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 H 224 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 H 224 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 H 224 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 H 224 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 H 224 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 H 224 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 H 224 SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER SEQRES 18 H 224 CYS ASP LYS SEQRES 1 L 220 ASP ILE VAL MET THR GLN SER PRO ASP SER LEU THR VAL SEQRES 2 L 220 SER LEU GLY GLU ARG ALA THR ILE SER CYS LYS SER SER SEQRES 3 L 220 GLN ARG LEU LEU TYR SER SER ASN ASN LYS ASN TYR LEU SEQRES 4 L 220 ALA TRP TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU SEQRES 5 L 220 LEU MET TYR TRP ALA SER THR ARG GLU SER GLY VAL PRO SEQRES 6 L 220 ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE SER SEQRES 7 L 220 LEU THR ILE SER SER LEU GLN ALA GLU ASP VAL ALA VAL SEQRES 8 L 220 TYR TYR CYS GLN GLN TYR TYR ASN PRO PRO TRP THR PHE SEQRES 9 L 220 GLY GLN GLY THR LYS VAL GLU VAL LYS ARG THR VAL ALA SEQRES 10 L 220 ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN SEQRES 11 L 220 LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL SEQRES 13 L 220 ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL SEQRES 14 L 220 THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 L 220 SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS SEQRES 16 L 220 LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SEQRES 17 L 220 SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 P 15 ACE GLY PRO PRO PRO PRO ILE ASP ASN GLY ASP ILE THR SEQRES 2 P 15 SER NH2 HET NH2 P1123 1 HETNAM NH2 AMINO GROUP FORMUL 3 NH2 H2 N FORMUL 4 HOH *341(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 ASN H 73 LYS H 75 5 3 HELIX 3 AA3 ARG H 83 THR H 87 5 5 HELIX 4 AA4 SER H 158 ALA H 160 5 3 HELIX 5 AA5 SER H 189 LEU H 191 5 3 HELIX 6 AA6 GLN L 79 VAL L 83 5 5 HELIX 7 AA7 SER L 121 LYS L 126 1 6 HELIX 8 AA8 LYS L 183 HIS L 189 1 7 HELIX 9 AA9 ASP P 1116 ILE P 1120 5 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 109 VAL H 113 1 O THR H 112 N GLY H 10 SHEET 3 AA2 6 ALA H 88 GLY H 95 -1 N ALA H 88 O VAL H 111 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N HIS H 35 O ALA H 93 SHEET 5 AA2 6 LEU H 45 MET H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 LYS H 57 TYR H 59 -1 O TYR H 58 N VAL H 50 SHEET 1 AA3 4 GLY H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 109 VAL H 113 1 O THR H 112 N GLY H 10 SHEET 3 AA3 4 ALA H 88 GLY H 95 -1 N ALA H 88 O VAL H 111 SHEET 4 AA3 4 MET H 100B TRP H 105 -1 O VAL H 104 N LYS H 94 SHEET 1 AA4 4 SER H 122 LEU H 126 0 SHEET 2 AA4 4 THR H 137 TYR H 147 -1 O LYS H 145 N SER H 122 SHEET 3 AA4 4 TYR H 178 PRO H 187 -1 O VAL H 186 N ALA H 138 SHEET 4 AA4 4 VAL H 165 THR H 167 -1 N HIS H 166 O VAL H 183 SHEET 1 AA5 4 SER H 122 LEU H 126 0 SHEET 2 AA5 4 THR H 137 TYR H 147 -1 O LYS H 145 N SER H 122 SHEET 3 AA5 4 TYR H 178 PRO H 187 -1 O VAL H 186 N ALA H 138 SHEET 4 AA5 4 VAL H 171 LEU H 172 -1 N VAL H 171 O SER H 179 SHEET 1 AA6 3 THR H 153 TRP H 156 0 SHEET 2 AA6 3 TYR H 196 HIS H 202 -1 O ASN H 199 N SER H 155 SHEET 3 AA6 3 THR H 207 VAL H 213 -1 O VAL H 213 N TYR H 196 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 ALA L 19 SER L 25 -1 O SER L 22 N SER L 7 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 SER L 10 SER L 14 0 SHEET 2 AA8 6 THR L 102 LYS L 107 1 O GLU L 105 N VAL L 13 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N ALA L 34 O GLN L 89 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA9 4 SER L 10 SER L 14 0 SHEET 2 AA9 4 THR L 102 LYS L 107 1 O GLU L 105 N VAL L 13 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.02 SSBOND 2 CYS H 142 CYS H 198 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.02 LINK C SER P1122 N NH2 P1123 1555 1555 1.33 CISPEP 1 ALA H 97 ALA H 98 0 7.62 CISPEP 2 PHE H 148 PRO H 149 0 -5.46 CISPEP 3 GLU H 150 PRO H 151 0 -0.74 CISPEP 4 SER L 7 PRO L 8 0 1.06 CISPEP 5 PRO L 94 PRO L 95 0 -3.27 CISPEP 6 TYR L 140 PRO L 141 0 4.70 CRYST1 51.280 65.547 71.267 90.00 106.37 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019501 0.000000 0.005728 0.00000 SCALE2 0.000000 0.015256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014625 0.00000