data_5EB0 # _entry.id 5EB0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5EB0 pdb_00005eb0 10.2210/pdb5eb0/pdb WWPDB D_1000214477 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5EAZ PDB . unspecified 5EB1 PDB . unspecified 5EB2 PDB . unspecified 5EB3 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EB0 _pdbx_database_status.recvd_initial_deposition_date 2015-10-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Xu, M.' 1 'Yang, X.' 2 'Yang, X.-A.' 3 'Zhou, L.' 4 'Liu, T.-Z.' 5 'Fan, Z.' 6 'Jiang, T.' 7 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CN _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Cell' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1674-8018 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 403 _citation.page_last 416 _citation.title 'Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1007/s13238-016-0264-7 _citation.pdbx_database_id_PubMed 27113583 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, M.' 1 ? primary 'Yang, X.' 2 ? primary 'Yang, X.-A.' 3 ? primary 'Zhou, L.' 4 ? primary 'Liu, T.-Z.' 5 ? primary 'Fan, Z.' 6 ? primary 'Jiang, T.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5EB0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 46.953 _cell.length_a_esd ? _cell.length_b 46.953 _cell.length_b_esd ? _cell.length_c 154.242 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man YfiB 14876.660 2 ? ? 'UNP residues 34-168' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 52 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNYGDEGYNQKL SERRAESVAAVFREAGMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIVPAE ; _entity_poly.pdbx_seq_one_letter_code_can ;GLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNYGDEGYNQKL SERRAESVAAVFREAGMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIVPAE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 SER n 1 4 ALA n 1 5 GLU n 1 6 GLN n 1 7 ILE n 1 8 ALA n 1 9 VAL n 1 10 LEU n 1 11 GLN n 1 12 GLU n 1 13 GLN n 1 14 GLY n 1 15 PHE n 1 16 GLU n 1 17 LEU n 1 18 ARG n 1 19 ASP n 1 20 GLU n 1 21 GLY n 1 22 TRP n 1 23 GLU n 1 24 PHE n 1 25 GLY n 1 26 MET n 1 27 SER n 1 28 SER n 1 29 LYS n 1 30 VAL n 1 31 LEU n 1 32 PHE n 1 33 GLY n 1 34 ASN n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 LEU n 1 40 ASN n 1 41 PRO n 1 42 ASP n 1 43 SER n 1 44 ARG n 1 45 ASN n 1 46 THR n 1 47 LEU n 1 48 THR n 1 49 LYS n 1 50 ILE n 1 51 ALA n 1 52 ARG n 1 53 ALA n 1 54 LEU n 1 55 LEU n 1 56 ALA n 1 57 VAL n 1 58 ASP n 1 59 ILE n 1 60 ASP n 1 61 LYS n 1 62 VAL n 1 63 ARG n 1 64 LEU n 1 65 GLU n 1 66 GLY n 1 67 HIS n 1 68 THR n 1 69 ASP n 1 70 ASN n 1 71 TYR n 1 72 GLY n 1 73 ASP n 1 74 GLU n 1 75 GLY n 1 76 TYR n 1 77 ASN n 1 78 GLN n 1 79 LYS n 1 80 LEU n 1 81 SER n 1 82 GLU n 1 83 ARG n 1 84 ARG n 1 85 ALA n 1 86 GLU n 1 87 SER n 1 88 VAL n 1 89 ALA n 1 90 ALA n 1 91 VAL n 1 92 PHE n 1 93 ARG n 1 94 GLU n 1 95 ALA n 1 96 GLY n 1 97 MET n 1 98 PRO n 1 99 ALA n 1 100 ALA n 1 101 ASN n 1 102 ILE n 1 103 GLU n 1 104 VAL n 1 105 ARG n 1 106 GLY n 1 107 LEU n 1 108 GLY n 1 109 MET n 1 110 SER n 1 111 LYS n 1 112 PRO n 1 113 VAL n 1 114 ALA n 1 115 ASP n 1 116 ASN n 1 117 LYS n 1 118 THR n 1 119 ARG n 1 120 ALA n 1 121 GLY n 1 122 ARG n 1 123 SER n 1 124 GLU n 1 125 ASN n 1 126 ARG n 1 127 ARG n 1 128 VAL n 1 129 ALA n 1 130 ILE n 1 131 ILE n 1 132 VAL n 1 133 PRO n 1 134 ALA n 1 135 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 135 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'yfiB, PA1119' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa PAO1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETDuet-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9I4L6_PSEAE _struct_ref.pdbx_db_accession Q9I4L6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNYGDEGYNQKL SERRAESVAAVFREAGMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIVPAE ; _struct_ref.pdbx_align_begin 34 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5EB0 A 1 ? 135 ? Q9I4L6 34 ? 168 ? 34 168 2 1 5EB0 B 1 ? 135 ? Q9I4L6 34 ? 168 ? 34 168 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EB0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M lithium sulfate monohydrate, 0.1 M Tris-HCl, 30%(w/v) polyethylene glycol 4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-09-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 31.200 _reflns.entry_id 5EB0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.800 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8105 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.100 _reflns.pdbx_Rmerge_I_obs 0.146 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 12.500 _reflns.pdbx_netI_over_sigmaI 8.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.929 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 89623 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.800 2.850 ? ? ? ? ? 412 ? 100.000 ? ? ? ? 0.497 ? ? ? ? ? ? ? ? 11.500 ? 0.556 ? ? ? ? 0 1 1 ? ? 2.850 2.900 ? ? ? ? ? 424 ? 100.000 ? ? ? ? 0.454 ? ? ? ? ? ? ? ? 11.500 ? 0.604 ? ? ? ? 0 2 1 ? ? 2.900 2.960 ? ? ? ? ? 404 ? 100.000 ? ? ? ? 0.410 ? ? ? ? ? ? ? ? 11.400 ? 0.633 ? ? ? ? 0 3 1 ? ? 2.960 3.020 ? ? ? ? ? 410 ? 100.000 ? ? ? ? 0.333 ? ? ? ? ? ? ? ? 11.600 ? 0.690 ? ? ? ? 0 4 1 ? ? 3.020 3.080 ? ? ? ? ? 408 ? 100.000 ? ? ? ? 0.307 ? ? ? ? ? ? ? ? 11.600 ? 0.737 ? ? ? ? 0 5 1 ? ? 3.080 3.150 ? ? ? ? ? 425 ? 100.000 ? ? ? ? 0.287 ? ? ? ? ? ? ? ? 11.500 ? 0.828 ? ? ? ? 0 6 1 ? ? 3.150 3.230 ? ? ? ? ? 395 ? 99.700 ? ? ? ? 0.258 ? ? ? ? ? ? ? ? 11.500 ? 0.867 ? ? ? ? 0 7 1 ? ? 3.230 3.320 ? ? ? ? ? 426 ? 100.000 ? ? ? ? 0.255 ? ? ? ? ? ? ? ? 11.600 ? 1.019 ? ? ? ? 0 8 1 ? ? 3.320 3.420 ? ? ? ? ? 404 ? 100.000 ? ? ? ? 0.226 ? ? ? ? ? ? ? ? 11.400 ? 1.018 ? ? ? ? 0 9 1 ? ? 3.420 3.530 ? ? ? ? ? 419 ? 99.500 ? ? ? ? 0.256 ? ? ? ? ? ? ? ? 11.300 ? 1.841 ? ? ? ? 0 10 1 ? ? 3.530 3.650 ? ? ? ? ? 414 ? 100.000 ? ? ? ? 0.193 ? ? ? ? ? ? ? ? 11.300 ? 1.130 ? ? ? ? 0 11 1 ? ? 3.650 3.800 ? ? ? ? ? 398 ? 100.000 ? ? ? ? 0.196 ? ? ? ? ? ? ? ? 11.100 ? 1.430 ? ? ? ? 0 12 1 ? ? 3.800 3.970 ? ? ? ? ? 403 ? 97.100 ? ? ? ? 0.181 ? ? ? ? ? ? ? ? 10.400 ? 1.408 ? ? ? ? 0 13 1 ? ? 3.970 4.180 ? ? ? ? ? 410 ? 98.300 ? ? ? ? 0.156 ? ? ? ? ? ? ? ? 10.800 ? 1.005 ? ? ? ? 0 14 1 ? ? 4.180 4.440 ? ? ? ? ? 398 ? 96.800 ? ? ? ? 0.146 ? ? ? ? ? ? ? ? 10.600 ? 0.955 ? ? ? ? 0 15 1 ? ? 4.440 4.790 ? ? ? ? ? 391 ? 92.200 ? ? ? ? 0.136 ? ? ? ? ? ? ? ? 10.400 ? 0.839 ? ? ? ? 0 16 1 ? ? 4.790 5.270 ? ? ? ? ? 396 ? 96.400 ? ? ? ? 0.130 ? ? ? ? ? ? ? ? 10.400 ? 0.814 ? ? ? ? 0 17 1 ? ? 5.270 6.030 ? ? ? ? ? 409 ? 97.800 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 10.800 ? 0.748 ? ? ? ? 0 18 1 ? ? 6.030 7.590 ? ? ? ? ? 396 ? 95.900 ? ? ? ? 0.102 ? ? ? ? ? ? ? ? 10.400 ? 0.571 ? ? ? ? 0 19 1 ? ? 7.590 50.000 ? ? ? ? ? 363 ? 83.600 ? ? ? ? 0.101 ? ? ? ? ? ? ? ? 9.900 ? 0.886 ? ? ? ? 0 20 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 166.280 _refine.B_iso_mean 42.5976 _refine.B_iso_min 11.340 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5EB0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8 _refine.ls_d_res_low 46.9530 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8009 _refine.ls_number_reflns_R_free 369 _refine.ls_number_reflns_R_work 7640 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.1300 _refine.ls_percent_reflns_R_free 4.6100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1950 _refine.ls_R_factor_R_free 0.2649 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1917 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.410 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3khn _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.8900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 46.9530 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 2143 _refine_hist.pdbx_number_residues_total 270 _refine_hist.pdbx_B_iso_mean_ligand 66.52 _refine_hist.pdbx_B_iso_mean_solvent 36.09 _refine_hist.pdbx_number_atoms_protein 2086 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 2114 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.132 ? 2844 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.069 ? 310 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 386 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.117 ? 810 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7983 3.2031 2728 . 122 2606 100.0000 . . . 0.2923 . 0.2094 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 3.2031 4.0353 2721 . 137 2584 99.0000 . . . 0.2998 . 0.1853 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 4.0353 46.9596 2560 . 110 2450 93.0000 . . . 0.2184 . 0.1880 . . . . . . 3 . . . # _struct.entry_id 5EB0 _struct.title 'crystal form II of YfiB belonging to P41' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EB0 _struct_keywords.text 'OmpA/Pal-like outer-membrane lipoprotein, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 3 ? GLY A 14 ? SER A 36 GLY A 47 1 ? 12 HELX_P HELX_P2 AA2 SER A 28 ? PHE A 32 ? SER A 61 PHE A 65 1 ? 5 HELX_P HELX_P3 AA3 ASN A 40 ? VAL A 57 ? ASN A 73 VAL A 90 1 ? 18 HELX_P HELX_P4 AA4 ASP A 73 ? GLU A 94 ? ASP A 106 GLU A 127 1 ? 22 HELX_P HELX_P5 AA5 PRO A 98 ? ALA A 100 ? PRO A 131 ALA A 133 5 ? 3 HELX_P HELX_P6 AA6 THR A 118 ? ARG A 126 ? THR A 151 ARG A 159 1 ? 9 HELX_P HELX_P7 AA7 SER B 3 ? GLN B 13 ? SER B 36 GLN B 46 1 ? 11 HELX_P HELX_P8 AA8 SER B 28 ? GLY B 33 ? SER B 61 GLY B 66 1 ? 6 HELX_P HELX_P9 AA9 ASN B 40 ? ALA B 56 ? ASN B 73 ALA B 89 1 ? 17 HELX_P HELX_P10 AB1 ASP B 73 ? ALA B 95 ? ASP B 106 ALA B 128 1 ? 23 HELX_P HELX_P11 AB2 PRO B 98 ? ALA B 100 ? PRO B 131 ALA B 133 5 ? 3 HELX_P HELX_P12 AB3 THR B 118 ? ARG B 126 ? THR B 151 ARG B 159 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 16 ? ARG A 18 ? GLU A 49 ARG A 51 AA1 2 GLY A 21 ? SER A 27 ? GLY A 54 SER A 60 AA1 3 ARG A 127 ? VAL A 132 ? ARG A 160 VAL A 165 AA1 4 VAL A 62 ? HIS A 67 ? VAL A 95 HIS A 100 AA1 5 ILE A 102 ? GLY A 108 ? ILE A 135 GLY A 141 AA2 1 GLU B 16 ? LEU B 17 ? GLU B 49 LEU B 50 AA2 2 GLY B 21 ? SER B 27 ? GLY B 54 SER B 60 AA2 3 ARG B 127 ? PRO B 133 ? ARG B 160 PRO B 166 AA2 4 VAL B 62 ? HIS B 67 ? VAL B 95 HIS B 100 AA2 5 ILE B 102 ? GLY B 106 ? ILE B 135 GLY B 139 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 18 ? N ARG A 51 O GLY A 21 ? O GLY A 54 AA1 2 3 N MET A 26 ? N MET A 59 O VAL A 128 ? O VAL A 161 AA1 3 4 O ALA A 129 ? O ALA A 162 N GLU A 65 ? N GLU A 98 AA1 4 5 N LEU A 64 ? N LEU A 97 O GLU A 103 ? O GLU A 136 AA2 1 2 N GLU B 16 ? N GLU B 49 O GLU B 23 ? O GLU B 56 AA2 2 3 N PHE B 24 ? N PHE B 57 O ILE B 130 ? O ILE B 163 AA2 3 4 O ILE B 131 ? O ILE B 164 N ARG B 63 ? N ARG B 96 AA2 4 5 N LEU B 64 ? N LEU B 97 O GLU B 103 ? O GLU B 136 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue SO4 B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 83 ? ARG A 116 . ? 1_445 ? 2 AC1 4 ASN B 34 ? ASN B 67 . ? 1_555 ? 3 AC1 4 HOH E . ? HOH B 303 . ? 1_555 ? 4 AC1 4 HOH E . ? HOH B 304 . ? 1_555 ? # _atom_sites.entry_id 5EB0 _atom_sites.fract_transf_matrix[1][1] 0.021298 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021298 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006483 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 34 34 GLY GLY A . n A 1 2 LEU 2 35 35 LEU LEU A . n A 1 3 SER 3 36 36 SER SER A . n A 1 4 ALA 4 37 37 ALA ALA A . n A 1 5 GLU 5 38 38 GLU GLU A . n A 1 6 GLN 6 39 39 GLN GLN A . n A 1 7 ILE 7 40 40 ILE ILE A . n A 1 8 ALA 8 41 41 ALA ALA A . n A 1 9 VAL 9 42 42 VAL VAL A . n A 1 10 LEU 10 43 43 LEU LEU A . n A 1 11 GLN 11 44 44 GLN GLN A . n A 1 12 GLU 12 45 45 GLU GLU A . n A 1 13 GLN 13 46 46 GLN GLN A . n A 1 14 GLY 14 47 47 GLY GLY A . n A 1 15 PHE 15 48 48 PHE PHE A . n A 1 16 GLU 16 49 49 GLU GLU A . n A 1 17 LEU 17 50 50 LEU LEU A . n A 1 18 ARG 18 51 51 ARG ARG A . n A 1 19 ASP 19 52 52 ASP ASP A . n A 1 20 GLU 20 53 53 GLU GLU A . n A 1 21 GLY 21 54 54 GLY GLY A . n A 1 22 TRP 22 55 55 TRP TRP A . n A 1 23 GLU 23 56 56 GLU GLU A . n A 1 24 PHE 24 57 57 PHE PHE A . n A 1 25 GLY 25 58 58 GLY GLY A . n A 1 26 MET 26 59 59 MET MET A . n A 1 27 SER 27 60 60 SER SER A . n A 1 28 SER 28 61 61 SER SER A . n A 1 29 LYS 29 62 62 LYS LYS A . n A 1 30 VAL 30 63 63 VAL VAL A . n A 1 31 LEU 31 64 64 LEU LEU A . n A 1 32 PHE 32 65 65 PHE PHE A . n A 1 33 GLY 33 66 66 GLY GLY A . n A 1 34 ASN 34 67 67 ASN ASN A . n A 1 35 ASN 35 68 68 ASN ASN A . n A 1 36 LEU 36 69 69 LEU LEU A . n A 1 37 ASP 37 70 70 ASP ASP A . n A 1 38 ARG 38 71 71 ARG ARG A . n A 1 39 LEU 39 72 72 LEU LEU A . n A 1 40 ASN 40 73 73 ASN ASN A . n A 1 41 PRO 41 74 74 PRO PRO A . n A 1 42 ASP 42 75 75 ASP ASP A . n A 1 43 SER 43 76 76 SER SER A . n A 1 44 ARG 44 77 77 ARG ARG A . n A 1 45 ASN 45 78 78 ASN ASN A . n A 1 46 THR 46 79 79 THR THR A . n A 1 47 LEU 47 80 80 LEU LEU A . n A 1 48 THR 48 81 81 THR THR A . n A 1 49 LYS 49 82 82 LYS LYS A . n A 1 50 ILE 50 83 83 ILE ILE A . n A 1 51 ALA 51 84 84 ALA ALA A . n A 1 52 ARG 52 85 85 ARG ARG A . n A 1 53 ALA 53 86 86 ALA ALA A . n A 1 54 LEU 54 87 87 LEU LEU A . n A 1 55 LEU 55 88 88 LEU LEU A . n A 1 56 ALA 56 89 89 ALA ALA A . n A 1 57 VAL 57 90 90 VAL VAL A . n A 1 58 ASP 58 91 91 ASP ASP A . n A 1 59 ILE 59 92 92 ILE ILE A . n A 1 60 ASP 60 93 93 ASP ASP A . n A 1 61 LYS 61 94 94 LYS LYS A . n A 1 62 VAL 62 95 95 VAL VAL A . n A 1 63 ARG 63 96 96 ARG ARG A . n A 1 64 LEU 64 97 97 LEU LEU A . n A 1 65 GLU 65 98 98 GLU GLU A . n A 1 66 GLY 66 99 99 GLY GLY A . n A 1 67 HIS 67 100 100 HIS HIS A . n A 1 68 THR 68 101 101 THR THR A . n A 1 69 ASP 69 102 102 ASP ASP A . n A 1 70 ASN 70 103 103 ASN ASN A . n A 1 71 TYR 71 104 104 TYR TYR A . n A 1 72 GLY 72 105 105 GLY GLY A . n A 1 73 ASP 73 106 106 ASP ASP A . n A 1 74 GLU 74 107 107 GLU GLU A . n A 1 75 GLY 75 108 108 GLY GLY A . n A 1 76 TYR 76 109 109 TYR TYR A . n A 1 77 ASN 77 110 110 ASN ASN A . n A 1 78 GLN 78 111 111 GLN GLN A . n A 1 79 LYS 79 112 112 LYS LYS A . n A 1 80 LEU 80 113 113 LEU LEU A . n A 1 81 SER 81 114 114 SER SER A . n A 1 82 GLU 82 115 115 GLU GLU A . n A 1 83 ARG 83 116 116 ARG ARG A . n A 1 84 ARG 84 117 117 ARG ARG A . n A 1 85 ALA 85 118 118 ALA ALA A . n A 1 86 GLU 86 119 119 GLU GLU A . n A 1 87 SER 87 120 120 SER SER A . n A 1 88 VAL 88 121 121 VAL VAL A . n A 1 89 ALA 89 122 122 ALA ALA A . n A 1 90 ALA 90 123 123 ALA ALA A . n A 1 91 VAL 91 124 124 VAL VAL A . n A 1 92 PHE 92 125 125 PHE PHE A . n A 1 93 ARG 93 126 126 ARG ARG A . n A 1 94 GLU 94 127 127 GLU GLU A . n A 1 95 ALA 95 128 128 ALA ALA A . n A 1 96 GLY 96 129 129 GLY GLY A . n A 1 97 MET 97 130 130 MET MET A . n A 1 98 PRO 98 131 131 PRO PRO A . n A 1 99 ALA 99 132 132 ALA ALA A . n A 1 100 ALA 100 133 133 ALA ALA A . n A 1 101 ASN 101 134 134 ASN ASN A . n A 1 102 ILE 102 135 135 ILE ILE A . n A 1 103 GLU 103 136 136 GLU GLU A . n A 1 104 VAL 104 137 137 VAL VAL A . n A 1 105 ARG 105 138 138 ARG ARG A . n A 1 106 GLY 106 139 139 GLY GLY A . n A 1 107 LEU 107 140 140 LEU LEU A . n A 1 108 GLY 108 141 141 GLY GLY A . n A 1 109 MET 109 142 142 MET MET A . n A 1 110 SER 110 143 143 SER SER A . n A 1 111 LYS 111 144 144 LYS LYS A . n A 1 112 PRO 112 145 145 PRO PRO A . n A 1 113 VAL 113 146 146 VAL VAL A . n A 1 114 ALA 114 147 147 ALA ALA A . n A 1 115 ASP 115 148 148 ASP ASP A . n A 1 116 ASN 116 149 149 ASN ASN A . n A 1 117 LYS 117 150 150 LYS LYS A . n A 1 118 THR 118 151 151 THR THR A . n A 1 119 ARG 119 152 152 ARG ARG A . n A 1 120 ALA 120 153 153 ALA ALA A . n A 1 121 GLY 121 154 154 GLY GLY A . n A 1 122 ARG 122 155 155 ARG ARG A . n A 1 123 SER 123 156 156 SER SER A . n A 1 124 GLU 124 157 157 GLU GLU A . n A 1 125 ASN 125 158 158 ASN ASN A . n A 1 126 ARG 126 159 159 ARG ARG A . n A 1 127 ARG 127 160 160 ARG ARG A . n A 1 128 VAL 128 161 161 VAL VAL A . n A 1 129 ALA 129 162 162 ALA ALA A . n A 1 130 ILE 130 163 163 ILE ILE A . n A 1 131 ILE 131 164 164 ILE ILE A . n A 1 132 VAL 132 165 165 VAL VAL A . n A 1 133 PRO 133 166 166 PRO PRO A . n A 1 134 ALA 134 167 167 ALA ALA A . n A 1 135 GLU 135 168 168 GLU GLU A . n B 1 1 GLY 1 34 34 GLY GLY B . n B 1 2 LEU 2 35 35 LEU LEU B . n B 1 3 SER 3 36 36 SER SER B . n B 1 4 ALA 4 37 37 ALA ALA B . n B 1 5 GLU 5 38 38 GLU GLU B . n B 1 6 GLN 6 39 39 GLN GLN B . n B 1 7 ILE 7 40 40 ILE ILE B . n B 1 8 ALA 8 41 41 ALA ALA B . n B 1 9 VAL 9 42 42 VAL VAL B . n B 1 10 LEU 10 43 43 LEU LEU B . n B 1 11 GLN 11 44 44 GLN GLN B . n B 1 12 GLU 12 45 45 GLU GLU B . n B 1 13 GLN 13 46 46 GLN GLN B . n B 1 14 GLY 14 47 47 GLY GLY B . n B 1 15 PHE 15 48 48 PHE PHE B . n B 1 16 GLU 16 49 49 GLU GLU B . n B 1 17 LEU 17 50 50 LEU LEU B . n B 1 18 ARG 18 51 51 ARG ARG B . n B 1 19 ASP 19 52 52 ASP ASP B . n B 1 20 GLU 20 53 53 GLU GLU B . n B 1 21 GLY 21 54 54 GLY GLY B . n B 1 22 TRP 22 55 55 TRP TRP B . n B 1 23 GLU 23 56 56 GLU GLU B . n B 1 24 PHE 24 57 57 PHE PHE B . n B 1 25 GLY 25 58 58 GLY GLY B . n B 1 26 MET 26 59 59 MET MET B . n B 1 27 SER 27 60 60 SER SER B . n B 1 28 SER 28 61 61 SER SER B . n B 1 29 LYS 29 62 62 LYS LYS B . n B 1 30 VAL 30 63 63 VAL VAL B . n B 1 31 LEU 31 64 64 LEU LEU B . n B 1 32 PHE 32 65 65 PHE PHE B . n B 1 33 GLY 33 66 66 GLY GLY B . n B 1 34 ASN 34 67 67 ASN ASN B . n B 1 35 ASN 35 68 68 ASN ASN B . n B 1 36 LEU 36 69 69 LEU LEU B . n B 1 37 ASP 37 70 70 ASP ASP B . n B 1 38 ARG 38 71 71 ARG ARG B . n B 1 39 LEU 39 72 72 LEU LEU B . n B 1 40 ASN 40 73 73 ASN ASN B . n B 1 41 PRO 41 74 74 PRO PRO B . n B 1 42 ASP 42 75 75 ASP ASP B . n B 1 43 SER 43 76 76 SER SER B . n B 1 44 ARG 44 77 77 ARG ARG B . n B 1 45 ASN 45 78 78 ASN ASN B . n B 1 46 THR 46 79 79 THR THR B . n B 1 47 LEU 47 80 80 LEU LEU B . n B 1 48 THR 48 81 81 THR THR B . n B 1 49 LYS 49 82 82 LYS LYS B . n B 1 50 ILE 50 83 83 ILE ILE B . n B 1 51 ALA 51 84 84 ALA ALA B . n B 1 52 ARG 52 85 85 ARG ARG B . n B 1 53 ALA 53 86 86 ALA ALA B . n B 1 54 LEU 54 87 87 LEU LEU B . n B 1 55 LEU 55 88 88 LEU LEU B . n B 1 56 ALA 56 89 89 ALA ALA B . n B 1 57 VAL 57 90 90 VAL VAL B . n B 1 58 ASP 58 91 91 ASP ASP B . n B 1 59 ILE 59 92 92 ILE ILE B . n B 1 60 ASP 60 93 93 ASP ASP B . n B 1 61 LYS 61 94 94 LYS LYS B . n B 1 62 VAL 62 95 95 VAL VAL B . n B 1 63 ARG 63 96 96 ARG ARG B . n B 1 64 LEU 64 97 97 LEU LEU B . n B 1 65 GLU 65 98 98 GLU GLU B . n B 1 66 GLY 66 99 99 GLY GLY B . n B 1 67 HIS 67 100 100 HIS HIS B . n B 1 68 THR 68 101 101 THR THR B . n B 1 69 ASP 69 102 102 ASP ASP B . n B 1 70 ASN 70 103 103 ASN ASN B . n B 1 71 TYR 71 104 104 TYR TYR B . n B 1 72 GLY 72 105 105 GLY GLY B . n B 1 73 ASP 73 106 106 ASP ASP B . n B 1 74 GLU 74 107 107 GLU GLU B . n B 1 75 GLY 75 108 108 GLY GLY B . n B 1 76 TYR 76 109 109 TYR TYR B . n B 1 77 ASN 77 110 110 ASN ASN B . n B 1 78 GLN 78 111 111 GLN GLN B . n B 1 79 LYS 79 112 112 LYS LYS B . n B 1 80 LEU 80 113 113 LEU LEU B . n B 1 81 SER 81 114 114 SER SER B . n B 1 82 GLU 82 115 115 GLU GLU B . n B 1 83 ARG 83 116 116 ARG ARG B . n B 1 84 ARG 84 117 117 ARG ARG B . n B 1 85 ALA 85 118 118 ALA ALA B . n B 1 86 GLU 86 119 119 GLU GLU B . n B 1 87 SER 87 120 120 SER SER B . n B 1 88 VAL 88 121 121 VAL VAL B . n B 1 89 ALA 89 122 122 ALA ALA B . n B 1 90 ALA 90 123 123 ALA ALA B . n B 1 91 VAL 91 124 124 VAL VAL B . n B 1 92 PHE 92 125 125 PHE PHE B . n B 1 93 ARG 93 126 126 ARG ARG B . n B 1 94 GLU 94 127 127 GLU GLU B . n B 1 95 ALA 95 128 128 ALA ALA B . n B 1 96 GLY 96 129 129 GLY GLY B . n B 1 97 MET 97 130 130 MET MET B . n B 1 98 PRO 98 131 131 PRO PRO B . n B 1 99 ALA 99 132 132 ALA ALA B . n B 1 100 ALA 100 133 133 ALA ALA B . n B 1 101 ASN 101 134 134 ASN ASN B . n B 1 102 ILE 102 135 135 ILE ILE B . n B 1 103 GLU 103 136 136 GLU GLU B . n B 1 104 VAL 104 137 137 VAL VAL B . n B 1 105 ARG 105 138 138 ARG ARG B . n B 1 106 GLY 106 139 139 GLY GLY B . n B 1 107 LEU 107 140 140 LEU LEU B . n B 1 108 GLY 108 141 141 GLY GLY B . n B 1 109 MET 109 142 142 MET MET B . n B 1 110 SER 110 143 143 SER SER B . n B 1 111 LYS 111 144 144 LYS LYS B . n B 1 112 PRO 112 145 145 PRO PRO B . n B 1 113 VAL 113 146 146 VAL VAL B . n B 1 114 ALA 114 147 147 ALA ALA B . n B 1 115 ASP 115 148 148 ASP ASP B . n B 1 116 ASN 116 149 149 ASN ASN B . n B 1 117 LYS 117 150 150 LYS LYS B . n B 1 118 THR 118 151 151 THR THR B . n B 1 119 ARG 119 152 152 ARG ARG B . n B 1 120 ALA 120 153 153 ALA ALA B . n B 1 121 GLY 121 154 154 GLY GLY B . n B 1 122 ARG 122 155 155 ARG ARG B . n B 1 123 SER 123 156 156 SER SER B . n B 1 124 GLU 124 157 157 GLU GLU B . n B 1 125 ASN 125 158 158 ASN ASN B . n B 1 126 ARG 126 159 159 ARG ARG B . n B 1 127 ARG 127 160 160 ARG ARG B . n B 1 128 VAL 128 161 161 VAL VAL B . n B 1 129 ALA 129 162 162 ALA ALA B . n B 1 130 ILE 130 163 163 ILE ILE B . n B 1 131 ILE 131 164 164 ILE ILE B . n B 1 132 VAL 132 165 165 VAL VAL B . n B 1 133 PRO 133 166 166 PRO PRO B . n B 1 134 ALA 134 167 167 ALA ALA B . n B 1 135 GLU 135 168 168 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 201 1 SO4 SO4 B . D 3 HOH 1 201 47 HOH HOH A . D 3 HOH 2 202 37 HOH HOH A . D 3 HOH 3 203 38 HOH HOH A . D 3 HOH 4 204 4 HOH HOH A . D 3 HOH 5 205 2 HOH HOH A . D 3 HOH 6 206 32 HOH HOH A . D 3 HOH 7 207 12 HOH HOH A . D 3 HOH 8 208 33 HOH HOH A . D 3 HOH 9 209 50 HOH HOH A . D 3 HOH 10 210 30 HOH HOH A . D 3 HOH 11 211 1 HOH HOH A . D 3 HOH 12 212 46 HOH HOH A . D 3 HOH 13 213 22 HOH HOH A . D 3 HOH 14 214 40 HOH HOH A . D 3 HOH 15 215 15 HOH HOH A . D 3 HOH 16 216 51 HOH HOH A . D 3 HOH 17 217 52 HOH HOH A . E 3 HOH 1 301 43 HOH HOH B . E 3 HOH 2 302 16 HOH HOH B . E 3 HOH 3 303 9 HOH HOH B . E 3 HOH 4 304 21 HOH HOH B . E 3 HOH 5 305 19 HOH HOH B . E 3 HOH 6 306 8 HOH HOH B . E 3 HOH 7 307 3 HOH HOH B . E 3 HOH 8 308 11 HOH HOH B . E 3 HOH 9 309 18 HOH HOH B . E 3 HOH 10 310 34 HOH HOH B . E 3 HOH 11 311 26 HOH HOH B . E 3 HOH 12 312 28 HOH HOH B . E 3 HOH 13 313 23 HOH HOH B . E 3 HOH 14 314 29 HOH HOH B . E 3 HOH 15 315 20 HOH HOH B . E 3 HOH 16 316 39 HOH HOH B . E 3 HOH 17 317 5 HOH HOH B . E 3 HOH 18 318 6 HOH HOH B . E 3 HOH 19 319 49 HOH HOH B . E 3 HOH 20 320 36 HOH HOH B . E 3 HOH 21 321 24 HOH HOH B . E 3 HOH 22 322 7 HOH HOH B . E 3 HOH 23 323 14 HOH HOH B . E 3 HOH 24 324 17 HOH HOH B . E 3 HOH 25 325 10 HOH HOH B . E 3 HOH 26 326 42 HOH HOH B . E 3 HOH 27 327 27 HOH HOH B . E 3 HOH 28 328 13 HOH HOH B . E 3 HOH 29 329 44 HOH HOH B . E 3 HOH 30 330 45 HOH HOH B . E 3 HOH 31 331 41 HOH HOH B . E 3 HOH 32 332 25 HOH HOH B . E 3 HOH 33 333 48 HOH HOH B . E 3 HOH 34 334 31 HOH HOH B . E 3 HOH 35 335 35 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 590 ? 1 MORE -4 ? 1 'SSA (A^2)' 14200 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-05-18 2 'Structure model' 1 1 2016-06-15 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? d*TREK ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B VAL 137 ? ? O B HOH 301 ? ? 2.18 2 1 OE2 A GLU 45 ? ? O A HOH 201 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 93 ? ? -142.15 19.88 2 1 ASP A 102 ? ? -78.66 -165.03 3 1 GLU A 127 ? ? -64.88 5.14 4 1 THR A 151 ? ? -171.56 139.96 5 1 ALA A 167 ? ? -84.03 34.30 6 1 ARG B 51 ? ? -120.64 -150.81 7 1 LEU B 69 ? ? -100.35 -68.27 8 1 LYS B 94 ? ? -177.01 149.12 9 1 ASP B 102 ? ? -78.75 -164.19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 SO4 S S N N 290 SO4 O1 O N N 291 SO4 O2 O N N 292 SO4 O3 O N N 293 SO4 O4 O N N 294 THR N N N N 295 THR CA C N S 296 THR C C N N 297 THR O O N N 298 THR CB C N R 299 THR OG1 O N N 300 THR CG2 C N N 301 THR OXT O N N 302 THR H H N N 303 THR H2 H N N 304 THR HA H N N 305 THR HB H N N 306 THR HG1 H N N 307 THR HG21 H N N 308 THR HG22 H N N 309 THR HG23 H N N 310 THR HXT H N N 311 TRP N N N N 312 TRP CA C N S 313 TRP C C N N 314 TRP O O N N 315 TRP CB C N N 316 TRP CG C Y N 317 TRP CD1 C Y N 318 TRP CD2 C Y N 319 TRP NE1 N Y N 320 TRP CE2 C Y N 321 TRP CE3 C Y N 322 TRP CZ2 C Y N 323 TRP CZ3 C Y N 324 TRP CH2 C Y N 325 TRP OXT O N N 326 TRP H H N N 327 TRP H2 H N N 328 TRP HA H N N 329 TRP HB2 H N N 330 TRP HB3 H N N 331 TRP HD1 H N N 332 TRP HE1 H N N 333 TRP HE3 H N N 334 TRP HZ2 H N N 335 TRP HZ3 H N N 336 TRP HH2 H N N 337 TRP HXT H N N 338 TYR N N N N 339 TYR CA C N S 340 TYR C C N N 341 TYR O O N N 342 TYR CB C N N 343 TYR CG C Y N 344 TYR CD1 C Y N 345 TYR CD2 C Y N 346 TYR CE1 C Y N 347 TYR CE2 C Y N 348 TYR CZ C Y N 349 TYR OH O N N 350 TYR OXT O N N 351 TYR H H N N 352 TYR H2 H N N 353 TYR HA H N N 354 TYR HB2 H N N 355 TYR HB3 H N N 356 TYR HD1 H N N 357 TYR HD2 H N N 358 TYR HE1 H N N 359 TYR HE2 H N N 360 TYR HH H N N 361 TYR HXT H N N 362 VAL N N N N 363 VAL CA C N S 364 VAL C C N N 365 VAL O O N N 366 VAL CB C N N 367 VAL CG1 C N N 368 VAL CG2 C N N 369 VAL OXT O N N 370 VAL H H N N 371 VAL H2 H N N 372 VAL HA H N N 373 VAL HB H N N 374 VAL HG11 H N N 375 VAL HG12 H N N 376 VAL HG13 H N N 377 VAL HG21 H N N 378 VAL HG22 H N N 379 VAL HG23 H N N 380 VAL HXT H N N 381 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SO4 S O1 doub N N 277 SO4 S O2 doub N N 278 SO4 S O3 sing N N 279 SO4 S O4 sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 TRP N CA sing N N 297 TRP N H sing N N 298 TRP N H2 sing N N 299 TRP CA C sing N N 300 TRP CA CB sing N N 301 TRP CA HA sing N N 302 TRP C O doub N N 303 TRP C OXT sing N N 304 TRP CB CG sing N N 305 TRP CB HB2 sing N N 306 TRP CB HB3 sing N N 307 TRP CG CD1 doub Y N 308 TRP CG CD2 sing Y N 309 TRP CD1 NE1 sing Y N 310 TRP CD1 HD1 sing N N 311 TRP CD2 CE2 doub Y N 312 TRP CD2 CE3 sing Y N 313 TRP NE1 CE2 sing Y N 314 TRP NE1 HE1 sing N N 315 TRP CE2 CZ2 sing Y N 316 TRP CE3 CZ3 doub Y N 317 TRP CE3 HE3 sing N N 318 TRP CZ2 CH2 doub Y N 319 TRP CZ2 HZ2 sing N N 320 TRP CZ3 CH2 sing Y N 321 TRP CZ3 HZ3 sing N N 322 TRP CH2 HH2 sing N N 323 TRP OXT HXT sing N N 324 TYR N CA sing N N 325 TYR N H sing N N 326 TYR N H2 sing N N 327 TYR CA C sing N N 328 TYR CA CB sing N N 329 TYR CA HA sing N N 330 TYR C O doub N N 331 TYR C OXT sing N N 332 TYR CB CG sing N N 333 TYR CB HB2 sing N N 334 TYR CB HB3 sing N N 335 TYR CG CD1 doub Y N 336 TYR CG CD2 sing Y N 337 TYR CD1 CE1 sing Y N 338 TYR CD1 HD1 sing N N 339 TYR CD2 CE2 doub Y N 340 TYR CD2 HD2 sing N N 341 TYR CE1 CZ doub Y N 342 TYR CE1 HE1 sing N N 343 TYR CE2 CZ sing Y N 344 TYR CE2 HE2 sing N N 345 TYR CZ OH sing N N 346 TYR OH HH sing N N 347 TYR OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation' China 31570768 1 'National Natural Science Foundation' China 91419308 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KHN _pdbx_initial_refinement_model.details ? #