HEADER HYDROLASE 18-OCT-15 5EB8 TITLE CRYSTAL STRUCTURE OF AROMATIC MUTANT (F4W) OF AN ALKALI THERMOSTABLE TITLE 2 GH10 XYLANASE FROM BACILLUS SP. NG-27 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-XYLANASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 52-405; COMPND 5 SYNONYM: ALKALI THERMOSTABLE GH10 ENDOXYLANASE; COMPND 6 EC: 3.2.1.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SP. NG-27; SOURCE 3 ORGANISM_TAXID: 65673; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GLYCOSYL HYDROLASE FAMILITY 10, XYLANASE, (BETA/ALPHA)8-BARREL, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.MAHANTA,A.BHARDWAJ,V.S.REDDY,S.RAMAKUMAR REVDAT 2 08-NOV-23 5EB8 1 REMARK LINK REVDAT 1 19-OCT-16 5EB8 0 JRNL AUTH P.MAHANTA,A.BHARDWAJ,V.S.REDDY,S.RAMAKUMAR JRNL TITL CRYSTAL STRUCTURE OF AROMATIC MUTANT (F4W) OF AN ALKALI JRNL TITL 2 THERMOSTABLE GH10 XYLANASE FROM BACILLUS SP. NG-27 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 36158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2393 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 417 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.74000 REMARK 3 B22 (A**2) : 1.43000 REMARK 3 B33 (A**2) : -4.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.283 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.201 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.650 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5958 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5376 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8130 ; 1.228 ; 1.925 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12336 ; 0.783 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 706 ; 5.786 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 342 ;34.030 ;24.737 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 928 ;12.301 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.295 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 848 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6928 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1462 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2830 ; 0.911 ; 1.856 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2829 ; 0.911 ; 1.856 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3534 ; 1.503 ; 2.780 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9030 0.2450 181.8770 REMARK 3 T TENSOR REMARK 3 T11: 0.0107 T22: 0.0164 REMARK 3 T33: 0.1069 T12: -0.0033 REMARK 3 T13: 0.0034 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.6979 L22: 0.1358 REMARK 3 L33: 1.2992 L12: -0.0195 REMARK 3 L13: -0.4131 L23: -0.0261 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: -0.0519 S13: 0.0473 REMARK 3 S21: -0.0087 S22: -0.0194 S23: 0.0101 REMARK 3 S31: -0.1062 S32: 0.0248 S33: -0.0415 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 354 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6040 15.3420 220.9950 REMARK 3 T TENSOR REMARK 3 T11: 0.0275 T22: 0.0210 REMARK 3 T33: 0.0790 T12: -0.0161 REMARK 3 T13: 0.0031 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.5595 L22: 0.1698 REMARK 3 L33: 2.0683 L12: 0.1681 REMARK 3 L13: -0.4425 L23: -0.5180 REMARK 3 S TENSOR REMARK 3 S11: 0.0234 S12: 0.0180 S13: 0.0183 REMARK 3 S21: 0.0033 S22: 0.0314 S23: -0.0025 REMARK 3 S31: -0.1095 S32: -0.0111 S33: -0.0548 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5EB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54179 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38071 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.219 REMARK 200 RESOLUTION RANGE LOW (A) : 88.375 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : 0.20000 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2F8Q REMARK 200 REMARK 200 REMARK: PLATE SHAPED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NACL, 120MM MGCL2, 0.1M TRIS-HCL REMARK 280 PH 8.5, 18% PEG 8000, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.63500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.37500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.66000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.37500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.63500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.66000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 33 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 33 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 30 35.72 -92.47 REMARK 500 ASN A 49 -28.76 -140.50 REMARK 500 GLU A 163 53.99 -93.33 REMARK 500 GLU A 259 39.58 -141.99 REMARK 500 ILE A 313 -66.60 -108.18 REMARK 500 ALA A 335 74.63 -154.30 REMARK 500 ASN B 49 -28.40 -144.49 REMARK 500 GLU B 163 52.34 -92.76 REMARK 500 GLU B 259 42.06 -143.21 REMARK 500 ILE B 313 -68.76 -107.70 REMARK 500 ALA B 335 71.07 -155.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 18 O REMARK 620 2 ASP A 302 O 118.7 REMARK 620 3 LEU A 305 O 85.2 87.0 REMARK 620 4 HOH A 702 O 83.0 85.4 160.8 REMARK 620 5 HOH A 724 O 135.0 106.1 93.2 105.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 292 OD1 REMARK 620 2 ARG A 351 O 91.3 REMARK 620 3 ASP A 354 OD1 147.6 81.6 REMARK 620 4 HOH A 504 O 73.7 86.5 74.4 REMARK 620 5 HOH A 558 O 74.5 87.1 136.0 147.4 REMARK 620 6 HOH A 564 O 143.6 90.3 68.4 142.7 69.2 REMARK 620 7 HOH A 652 O 90.6 178.1 96.5 93.6 93.8 88.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 18 O REMARK 620 2 ASP B 302 O 117.9 REMARK 620 3 LEU B 305 O 91.5 84.1 REMARK 620 4 HOH B 639 O 83.8 85.9 165.5 REMARK 620 5 HOH B 650 O 153.1 88.3 84.6 105.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 292 OD1 REMARK 620 2 ARG B 351 O 95.8 REMARK 620 3 ASP B 354 OD1 147.5 88.2 REMARK 620 4 HOH B 553 O 69.5 84.9 78.8 REMARK 620 5 HOH B 560 O 87.2 176.5 90.2 97.8 REMARK 620 6 HOH B 593 O 141.8 87.4 70.5 148.6 89.1 REMARK 620 7 HOH B 599 O 79.3 82.1 133.2 144.6 96.8 63.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EBA RELATED DB: PDB DBREF 5EB8 A 1 354 UNP O30700 O30700_9BACI 52 405 DBREF 5EB8 B 1 354 UNP O30700 O30700_9BACI 52 405 SEQADV 5EB8 MET A 0 UNP O30700 EXPRESSION TAG SEQADV 5EB8 TRP A 4 UNP O30700 PHE 55 ENGINEERED MUTATION SEQADV 5EB8 MET B 0 UNP O30700 EXPRESSION TAG SEQADV 5EB8 TRP B 4 UNP O30700 PHE 55 ENGINEERED MUTATION SEQRES 1 A 355 MET VAL GLN PRO TRP ALA TRP GLN VAL ALA SER LEU ALA SEQRES 2 A 355 ASP ARG TYR GLU GLU SER PHE ASP ILE GLY ALA ALA VAL SEQRES 3 A 355 GLU PRO HIS GLN LEU ASN GLY ARG GLN GLY LYS VAL LEU SEQRES 4 A 355 LYS HIS HIS TYR ASN SER ILE VAL ALA GLU ASN ALA MET SEQRES 5 A 355 LYS PRO ILE SER LEU GLN PRO GLU GLU GLY VAL PHE THR SEQRES 6 A 355 TRP ASP GLY ALA ASP ALA ILE VAL GLU PHE ALA ARG LYS SEQRES 7 A 355 ASN ASN MET ASN LEU ARG PHE HIS THR LEU VAL TRP HIS SEQRES 8 A 355 ASN GLN VAL PRO ASP TRP PHE PHE LEU ASP GLU GLU GLY SEQRES 9 A 355 ASN PRO MET VAL GLU GLU THR ASN GLU ALA LYS ARG GLN SEQRES 10 A 355 ALA ASN LYS GLU LEU LEU LEU GLU ARG LEU GLU THR HIS SEQRES 11 A 355 ILE LYS THR VAL VAL GLU ARG TYR LYS ASP ASP VAL THR SEQRES 12 A 355 ALA TRP ASP VAL VAL ASN GLU VAL VAL ASP ASP GLY THR SEQRES 13 A 355 PRO ASN GLU ARG GLY LEU ARG GLU SER VAL TRP TYR GLN SEQRES 14 A 355 ILE THR GLY ASP GLU TYR ILE ARG VAL ALA PHE GLU THR SEQRES 15 A 355 ALA ARG LYS TYR ALA GLY GLU ASP ALA LYS LEU PHE ILE SEQRES 16 A 355 ASN ASP TYR ASN THR GLU VAL THR PRO LYS ARG ASP HIS SEQRES 17 A 355 LEU TYR ASN LEU VAL GLN ASP LEU LEU ALA ASP GLY VAL SEQRES 18 A 355 PRO ILE ASP GLY VAL GLY HIS GLN ALA HIS ILE GLN ILE SEQRES 19 A 355 ASP TRP PRO THR ILE ASP GLU ILE ARG THR SER MET GLU SEQRES 20 A 355 MET PHE ALA GLY LEU GLY LEU ASP ASN GLN VAL THR GLU SEQRES 21 A 355 LEU ASP VAL SER LEU TYR GLY TRP PRO PRO ARG PRO ALA SEQRES 22 A 355 PHE PRO THR TYR ASP ALA ILE PRO GLN GLU ARG PHE GLN SEQRES 23 A 355 ALA GLN ALA ASP ARG TYR ASN GLN LEU PHE GLU LEU TYR SEQRES 24 A 355 GLU GLU LEU ASP ALA ASP LEU SER SER VAL THR PHE TRP SEQRES 25 A 355 GLY ILE ALA ASP ASN HIS THR TRP LEU ASP ASP ARG ALA SEQRES 26 A 355 ARG GLU TYR ASN ASP GLY VAL GLY LYS ASP ALA PRO PHE SEQRES 27 A 355 VAL PHE ASP PRO ASN TYR ARG VAL LYS PRO ALA PHE TRP SEQRES 28 A 355 ARG ILE ILE ASP SEQRES 1 B 355 MET VAL GLN PRO TRP ALA TRP GLN VAL ALA SER LEU ALA SEQRES 2 B 355 ASP ARG TYR GLU GLU SER PHE ASP ILE GLY ALA ALA VAL SEQRES 3 B 355 GLU PRO HIS GLN LEU ASN GLY ARG GLN GLY LYS VAL LEU SEQRES 4 B 355 LYS HIS HIS TYR ASN SER ILE VAL ALA GLU ASN ALA MET SEQRES 5 B 355 LYS PRO ILE SER LEU GLN PRO GLU GLU GLY VAL PHE THR SEQRES 6 B 355 TRP ASP GLY ALA ASP ALA ILE VAL GLU PHE ALA ARG LYS SEQRES 7 B 355 ASN ASN MET ASN LEU ARG PHE HIS THR LEU VAL TRP HIS SEQRES 8 B 355 ASN GLN VAL PRO ASP TRP PHE PHE LEU ASP GLU GLU GLY SEQRES 9 B 355 ASN PRO MET VAL GLU GLU THR ASN GLU ALA LYS ARG GLN SEQRES 10 B 355 ALA ASN LYS GLU LEU LEU LEU GLU ARG LEU GLU THR HIS SEQRES 11 B 355 ILE LYS THR VAL VAL GLU ARG TYR LYS ASP ASP VAL THR SEQRES 12 B 355 ALA TRP ASP VAL VAL ASN GLU VAL VAL ASP ASP GLY THR SEQRES 13 B 355 PRO ASN GLU ARG GLY LEU ARG GLU SER VAL TRP TYR GLN SEQRES 14 B 355 ILE THR GLY ASP GLU TYR ILE ARG VAL ALA PHE GLU THR SEQRES 15 B 355 ALA ARG LYS TYR ALA GLY GLU ASP ALA LYS LEU PHE ILE SEQRES 16 B 355 ASN ASP TYR ASN THR GLU VAL THR PRO LYS ARG ASP HIS SEQRES 17 B 355 LEU TYR ASN LEU VAL GLN ASP LEU LEU ALA ASP GLY VAL SEQRES 18 B 355 PRO ILE ASP GLY VAL GLY HIS GLN ALA HIS ILE GLN ILE SEQRES 19 B 355 ASP TRP PRO THR ILE ASP GLU ILE ARG THR SER MET GLU SEQRES 20 B 355 MET PHE ALA GLY LEU GLY LEU ASP ASN GLN VAL THR GLU SEQRES 21 B 355 LEU ASP VAL SER LEU TYR GLY TRP PRO PRO ARG PRO ALA SEQRES 22 B 355 PHE PRO THR TYR ASP ALA ILE PRO GLN GLU ARG PHE GLN SEQRES 23 B 355 ALA GLN ALA ASP ARG TYR ASN GLN LEU PHE GLU LEU TYR SEQRES 24 B 355 GLU GLU LEU ASP ALA ASP LEU SER SER VAL THR PHE TRP SEQRES 25 B 355 GLY ILE ALA ASP ASN HIS THR TRP LEU ASP ASP ARG ALA SEQRES 26 B 355 ARG GLU TYR ASN ASP GLY VAL GLY LYS ASP ALA PRO PHE SEQRES 27 B 355 VAL PHE ASP PRO ASN TYR ARG VAL LYS PRO ALA PHE TRP SEQRES 28 B 355 ARG ILE ILE ASP HET MG A 401 1 HET NA A 402 1 HET MG B 401 1 HET NA B 402 1 HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 4 NA 2(NA 1+) FORMUL 7 HOH *417(H2 O) HELIX 1 AA1 TRP A 4 VAL A 8 5 5 HELIX 2 AA2 SER A 10 TYR A 15 1 6 HELIX 3 AA3 GLU A 26 LEU A 30 5 5 HELIX 4 AA4 ASN A 31 TYR A 42 1 12 HELIX 5 AA5 LYS A 52 GLN A 57 1 6 HELIX 6 AA6 TRP A 65 ASN A 78 1 14 HELIX 7 AA7 PRO A 94 LEU A 99 5 6 HELIX 8 AA8 PRO A 105 GLU A 109 5 5 HELIX 9 AA9 ASN A 111 LYS A 138 1 28 HELIX 10 AB1 SER A 164 GLY A 171 1 8 HELIX 11 AB2 ASP A 172 GLY A 187 1 16 HELIX 12 AB3 PRO A 203 ASP A 218 1 16 HELIX 13 AB4 THR A 237 LEU A 251 1 15 HELIX 14 AB5 PRO A 280 LEU A 301 1 22 HELIX 15 AB6 TRP A 319 TYR A 327 1 9 HELIX 16 AB7 LYS A 346 ASP A 354 1 9 HELIX 17 AB8 TRP B 4 VAL B 8 5 5 HELIX 18 AB9 SER B 10 TYR B 15 1 6 HELIX 19 AC1 GLU B 26 LEU B 30 5 5 HELIX 20 AC2 ASN B 31 TYR B 42 1 12 HELIX 21 AC3 LYS B 52 GLN B 57 1 6 HELIX 22 AC4 TRP B 65 ASN B 78 1 14 HELIX 23 AC5 PRO B 94 LEU B 99 5 6 HELIX 24 AC6 PRO B 105 GLU B 109 5 5 HELIX 25 AC7 ASN B 111 LYS B 138 1 28 HELIX 26 AC8 SER B 164 GLY B 171 1 8 HELIX 27 AC9 ASP B 172 GLY B 187 1 16 HELIX 28 AD1 PRO B 203 ASP B 218 1 16 HELIX 29 AD2 THR B 237 LEU B 251 1 15 HELIX 30 AD3 PRO B 280 LEU B 301 1 22 HELIX 31 AD4 TRP B 319 TYR B 327 1 9 HELIX 32 AD5 LYS B 346 ASP B 354 1 9 SHEET 1 AA110 HIS A 230 ILE A 231 0 SHEET 2 AA110 ASP A 254 VAL A 262 1 O ASP A 261 N ILE A 231 SHEET 3 AA110 LEU A 305 PHE A 310 1 O THR A 309 N LEU A 260 SHEET 4 AA110 ASP A 20 VAL A 25 1 N GLY A 22 O VAL A 308 SHEET 5 AA110 SER A 44 ALA A 47 1 O VAL A 46 N VAL A 25 SHEET 6 AA110 ASN A 81 HIS A 85 1 O ARG A 83 N ILE A 45 SHEET 7 AA110 ALA A 143 ASN A 148 1 O ASP A 145 N PHE A 84 SHEET 8 AA110 LEU A 192 ASP A 196 1 O PHE A 193 N TRP A 144 SHEET 9 AA110 GLY A 224 HIS A 227 1 O GLY A 226 N ILE A 194 SHEET 10 AA110 ASP A 254 VAL A 262 1 O GLN A 256 N HIS A 227 SHEET 1 AA210 HIS B 230 ILE B 231 0 SHEET 2 AA210 ASP B 254 VAL B 262 1 O ASP B 261 N ILE B 231 SHEET 3 AA210 LEU B 305 PHE B 310 1 O THR B 309 N VAL B 257 SHEET 4 AA210 ASP B 20 VAL B 25 1 N GLY B 22 O PHE B 310 SHEET 5 AA210 SER B 44 ALA B 47 1 O VAL B 46 N VAL B 25 SHEET 6 AA210 ASN B 81 HIS B 85 1 O ARG B 83 N ILE B 45 SHEET 7 AA210 ALA B 143 ASN B 148 1 O ALA B 143 N PHE B 84 SHEET 8 AA210 LEU B 192 ASP B 196 1 O PHE B 193 N TRP B 144 SHEET 9 AA210 GLY B 224 HIS B 227 1 O GLY B 226 N ILE B 194 SHEET 10 AA210 ASP B 254 VAL B 262 1 O GLN B 256 N HIS B 227 LINK O SER A 18 NA NA A 402 1555 1555 2.30 LINK OD1 ASN A 292 MG MG A 401 1555 1555 2.27 LINK O ASP A 302 NA NA A 402 1555 1555 2.14 LINK O LEU A 305 NA NA A 402 1555 1555 2.38 LINK O ARG A 351 MG MG A 401 1555 1555 2.11 LINK OD1 ASP A 354 MG MG A 401 1555 1555 2.42 LINK MG MG A 401 O HOH A 504 1555 1555 2.43 LINK MG MG A 401 O HOH A 558 1555 1555 2.54 LINK MG MG A 401 O HOH A 564 1555 1555 2.33 LINK MG MG A 401 O HOH A 652 1555 1555 2.32 LINK NA NA A 402 O HOH A 702 1555 1555 2.40 LINK NA NA A 402 O HOH A 724 1555 1555 2.23 LINK O SER B 18 NA NA B 402 1555 1555 2.24 LINK OD1 ASN B 292 MG MG B 401 1555 1555 2.30 LINK O ASP B 302 NA NA B 402 1555 1555 2.25 LINK O LEU B 305 NA NA B 402 1555 1555 2.37 LINK O ARG B 351 MG MG B 401 1555 1555 2.25 LINK OD1 ASP B 354 MG MG B 401 1555 1555 2.44 LINK MG MG B 401 O HOH B 553 1555 1555 2.49 LINK MG MG B 401 O HOH B 560 1555 1555 2.36 LINK MG MG B 401 O HOH B 593 1555 1555 2.38 LINK MG MG B 401 O HOH B 599 1555 1555 2.49 LINK NA NA B 402 O HOH B 639 1555 1555 2.63 LINK NA NA B 402 O HOH B 650 1555 1555 2.25 CISPEP 1 HIS A 85 THR A 86 0 -1.90 CISPEP 2 THR A 202 PRO A 203 0 1.78 CISPEP 3 TRP A 235 PRO A 236 0 -9.50 CISPEP 4 TRP A 267 PRO A 268 0 -6.26 CISPEP 5 ARG A 270 PRO A 271 0 -4.50 CISPEP 6 HIS B 85 THR B 86 0 -0.64 CISPEP 7 THR B 202 PRO B 203 0 4.40 CISPEP 8 TRP B 235 PRO B 236 0 -9.17 CISPEP 9 TRP B 267 PRO B 268 0 -2.43 CISPEP 10 ARG B 270 PRO B 271 0 2.42 SITE 1 AC1 7 ASN A 292 ARG A 351 ASP A 354 HOH A 504 SITE 2 AC1 7 HOH A 558 HOH A 564 HOH A 652 SITE 1 AC2 5 SER A 18 ASP A 302 LEU A 305 HOH A 702 SITE 2 AC2 5 HOH A 724 SITE 1 AC3 7 ASN B 292 ARG B 351 ASP B 354 HOH B 553 SITE 2 AC3 7 HOH B 560 HOH B 593 HOH B 599 SITE 1 AC4 5 SER B 18 ASP B 302 LEU B 305 HOH B 639 SITE 2 AC4 5 HOH B 650 CRYST1 55.270 77.320 176.750 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018093 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005658 0.00000