HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 20-OCT-15 5ECC
TITLE KLEBSIELLA PNEUMONIAE DFRA1 COMPLEXED WITH NADPH AND 6-ETHYL-5-(3-(2-
TITLE 2 METHOXY-5-(PYRIDIN-4-YL)PHENYL)PROP-1-YN-1-YL)PYRIMIDINE-2,4-DIAMINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DEHYDROFOLATE REDUCTASE TYPE I;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: DFRA1,DIHYDROFOLATE REDUCTASE;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE;
SOURCE 3 ORGANISM_TAXID: 573;
SOURCE 4 GENE: DFRA1;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 8 EXPRESSION_SYSTEM_VARIANT: DE3;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-41A(+)
KEYWDS OXIDOREDUCTASE, ANTIFOLATES, DFRA1, PLASMID BORNE RESISTANCE,
KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR M.N.LOMBARDO,A.C.ANDERSON
REVDAT 5 06-MAR-24 5ECC 1 LINK
REVDAT 4 11-DEC-19 5ECC 1 REMARK
REVDAT 3 18-APR-18 5ECC 1 JRNL
REVDAT 2 27-SEP-17 5ECC 1 REMARK
REVDAT 1 18-MAY-16 5ECC 0
JRNL AUTH M.N.LOMBARDO,N.G-DAYANANDAN,D.L.WRIGHT,A.C.ANDERSON
JRNL TITL CRYSTAL STRUCTURES OF TRIMETHOPRIM-RESISTANT DFRA1
JRNL TITL 2 RATIONALIZE POTENT INHIBITION BY PROPARGYL-LINKED
JRNL TITL 3 ANTIFOLATES.
JRNL REF ACS INFECT DIS V. 2 149 2016
JRNL REFN ESSN 2373-8227
JRNL PMID 27624966
JRNL DOI 10.1021/ACSINFECDIS.5B00129
REMARK 2
REMARK 2 RESOLUTION. 1.87 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.9_1692
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.54
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380
REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1
REMARK 3 NUMBER OF REFLECTIONS : 29029
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.175
REMARK 3 R VALUE (WORKING SET) : 0.173
REMARK 3 FREE R VALUE : 0.209
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990
REMARK 3 FREE R VALUE TEST SET COUNT : 1448
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 28.5456 - 4.0254 1.00 3232 173 0.1434 0.1748
REMARK 3 2 4.0254 - 3.1964 1.00 3091 161 0.1558 0.1870
REMARK 3 3 3.1964 - 2.7928 1.00 3089 141 0.1847 0.2146
REMARK 3 4 2.7928 - 2.5376 1.00 3032 171 0.1948 0.2371
REMARK 3 5 2.5376 - 2.3558 1.00 3046 161 0.1992 0.2522
REMARK 3 6 2.3558 - 2.2170 1.00 3052 161 0.1907 0.2309
REMARK 3 7 2.2170 - 2.1060 0.97 2899 159 0.2077 0.2757
REMARK 3 8 2.1060 - 2.0143 0.84 2528 132 0.2254 0.2649
REMARK 3 9 2.0143 - 1.9368 0.69 2095 109 0.2581 0.3037
REMARK 3 10 1.9368 - 1.8700 0.50 1517 80 0.3586 0.3432
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.008 2912
REMARK 3 ANGLE : 1.198 3989
REMARK 3 CHIRALITY : 0.054 422
REMARK 3 PLANARITY : 0.004 496
REMARK 3 DIHEDRAL : 14.929 1098
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5ECC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-15.
REMARK 100 THE DEPOSITION ID IS D_1000214626.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 24-APR-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.5
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : NSLS
REMARK 200 BEAMLINE : X25
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.10
REMARK 200 MONOCHROMATOR : SI(111) DOUBLE MONOCHROMATOR
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29029
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870
REMARK 200 RESOLUTION RANGE LOW (A) : 28.540
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1
REMARK 200 DATA REDUNDANCY : 5.100
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.06000
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.8000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : 50.0
REMARK 200 DATA REDUNDANCY IN SHELL : 1.80
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.800
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 54.62
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MM IMIDAZOLE, 300 MM CALCIUM
REMARK 280 CHLORIDE AND 15 % PEG 6000, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 277.15K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+2/3
REMARK 290 6555 -X,-X+Y,-Z+1/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.92800
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.85600
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.85600
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.92800
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 4850 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 13990 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 11280 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 26490 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 131.98054
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -37.92800
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 CA CA B 205 LIES ON A SPECIAL POSITION.
REMARK 375 HOH B 352 LIES ON A SPECIAL POSITION.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 334 O HOH A 368 2.02
REMARK 500 O HOH A 304 O HOH A 357 2.04
REMARK 500 O HOH A 351 O HOH A 360 2.04
REMARK 500 O HOH A 367 O HOH B 394 2.07
REMARK 500 O HOH B 301 O HOH B 383 2.09
REMARK 500 O HOH A 369 O HOH B 336 2.12
REMARK 500 NH2 ARG A 63 O HOH A 301 2.12
REMARK 500 ND2 ASN B 55 O HOH B 301 2.14
REMARK 500 O HOH B 345 O HOH B 382 2.15
REMARK 500 O HOH B 365 O HOH B 398 2.16
REMARK 500 O HOH B 309 O HOH B 388 2.19
REMARK 500 O HOH A 301 O HOH A 311 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 325 O HOH A 358 4555 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PRO A 21 46.35 -79.21
REMARK 500 PRO B 21 45.23 -81.70
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 6DR A 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 6DR A 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 204
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 205
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 6DR B 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 6DR B 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 204
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 205
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 206
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5ECX RELATED DB: PDB
DBREF 5ECC A 0 156 UNP A4GRC7 A4GRC7_KLEPN 1 157
DBREF 5ECC B 0 156 UNP A4GRC7 A4GRC7_KLEPN 1 157
SEQRES 1 A 157 MET LYS LEU SER LEU MET VAL ALA ILE SER LYS ASN GLY
SEQRES 2 A 157 VAL ILE GLY ASN GLY PRO ASP ILE PRO TRP SER ALA LYS
SEQRES 3 A 157 GLY GLU GLN LEU LEU PHE LYS ALA ILE THR TYR ASN GLN
SEQRES 4 A 157 TRP LEU LEU VAL GLY ARG LYS THR PHE GLU SER MET GLY
SEQRES 5 A 157 ALA LEU PRO ASN ARG LYS TYR ALA VAL VAL THR ARG SER
SEQRES 6 A 157 SER PHE THR SER ASP ASN GLU ASN VAL LEU ILE PHE PRO
SEQRES 7 A 157 SER ILE LYS ASP ALA LEU THR ASN LEU LYS LYS ILE THR
SEQRES 8 A 157 ASP HIS VAL ILE VAL SER GLY GLY GLY GLU ILE TYR LYS
SEQRES 9 A 157 SER LEU ILE ASP GLN VAL ASP THR LEU HIS ILE SER THR
SEQRES 10 A 157 ILE ASP ILE GLU PRO GLU GLY ASP VAL TYR PHE PRO GLU
SEQRES 11 A 157 ILE PRO SER ASN PHE ARG PRO VAL PHE THR GLN ASP PHE
SEQRES 12 A 157 ALA SER ASN ILE ASN TYR SER TYR GLN ILE TRP GLN LYS
SEQRES 13 A 157 GLY
SEQRES 1 B 157 MET LYS LEU SER LEU MET VAL ALA ILE SER LYS ASN GLY
SEQRES 2 B 157 VAL ILE GLY ASN GLY PRO ASP ILE PRO TRP SER ALA LYS
SEQRES 3 B 157 GLY GLU GLN LEU LEU PHE LYS ALA ILE THR TYR ASN GLN
SEQRES 4 B 157 TRP LEU LEU VAL GLY ARG LYS THR PHE GLU SER MET GLY
SEQRES 5 B 157 ALA LEU PRO ASN ARG LYS TYR ALA VAL VAL THR ARG SER
SEQRES 6 B 157 SER PHE THR SER ASP ASN GLU ASN VAL LEU ILE PHE PRO
SEQRES 7 B 157 SER ILE LYS ASP ALA LEU THR ASN LEU LYS LYS ILE THR
SEQRES 8 B 157 ASP HIS VAL ILE VAL SER GLY GLY GLY GLU ILE TYR LYS
SEQRES 9 B 157 SER LEU ILE ASP GLN VAL ASP THR LEU HIS ILE SER THR
SEQRES 10 B 157 ILE ASP ILE GLU PRO GLU GLY ASP VAL TYR PHE PRO GLU
SEQRES 11 B 157 ILE PRO SER ASN PHE ARG PRO VAL PHE THR GLN ASP PHE
SEQRES 12 B 157 ALA SER ASN ILE ASN TYR SER TYR GLN ILE TRP GLN LYS
SEQRES 13 B 157 GLY
HET NAP A 201 48
HET 6DR A 202 27
HET 6DR A 203 27
HET GOL A 204 6
HET CA A 205 1
HET NAP B 201 48
HET 6DR B 202 27
HET 6DR B 203 27
HET GOL B 204 6
HET CA B 205 1
HET CA B 206 1
HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
HETNAM 6DR 6-ETHYL-5-{3-[2-METHOXY-5-(PYRIDIN-4-YL)PHENYL]PROP-1-
HETNAM 2 6DR YN-1-YL}PYRIMIDINE-2,4-DIAMINE
HETNAM GOL GLYCEROL
HETNAM CA CALCIUM ION
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 3 NAP 2(C21 H28 N7 O17 P3)
FORMUL 4 6DR 4(C21 H21 N5 O)
FORMUL 6 GOL 2(C3 H8 O3)
FORMUL 7 CA 3(CA 2+)
FORMUL 14 HOH *175(H2 O)
HELIX 1 AA1 GLY A 26 TYR A 36 1 11
HELIX 2 AA2 ARG A 44 GLY A 51 1 8
HELIX 3 AA3 SER A 78 THR A 90 1 13
HELIX 4 AA4 GLY A 98 ILE A 106 1 9
HELIX 5 AA5 ASP A 107 VAL A 109 5 3
HELIX 6 AA6 GLY B 26 THR B 35 1 10
HELIX 7 AA7 ARG B 44 GLY B 51 1 8
HELIX 8 AA8 SER B 78 LYS B 87 1 10
HELIX 9 AA9 GLY B 98 ILE B 106 1 9
HELIX 10 AB1 ASP B 107 VAL B 109 5 3
SHEET 1 AA1 8 VAL A 73 PHE A 76 0
SHEET 2 AA1 8 LYS A 57 VAL A 61 1 N TYR A 58 O LEU A 74
SHEET 3 AA1 8 TRP A 39 GLY A 43 1 N LEU A 40 O ALA A 59
SHEET 4 AA1 8 HIS A 92 VAL A 95 1 O ILE A 94 N TRP A 39
SHEET 5 AA1 8 LYS A 1 SER A 9 1 N SER A 3 O VAL A 95
SHEET 6 AA1 8 THR A 111 ILE A 117 1 O SER A 115 N ILE A 8
SHEET 7 AA1 8 TYR A 148 LYS A 155 -1 O SER A 149 N THR A 116
SHEET 8 AA1 8 PHE A 134 PHE A 142 -1 N VAL A 137 O ILE A 152
SHEET 1 AA2 2 VAL A 13 GLY A 15 0
SHEET 2 AA2 2 VAL A 125 TYR A 126 -1 O VAL A 125 N ILE A 14
SHEET 1 AA3 8 VAL B 73 PHE B 76 0
SHEET 2 AA3 8 LYS B 57 VAL B 61 1 N VAL B 60 O PHE B 76
SHEET 3 AA3 8 TRP B 39 GLY B 43 1 N LEU B 40 O ALA B 59
SHEET 4 AA3 8 HIS B 92 VAL B 95 1 O ILE B 94 N TRP B 39
SHEET 5 AA3 8 LYS B 1 SER B 9 1 N SER B 3 O VAL B 95
SHEET 6 AA3 8 THR B 111 ILE B 117 1 O HIS B 113 N LEU B 4
SHEET 7 AA3 8 TYR B 148 LYS B 155 -1 O SER B 149 N THR B 116
SHEET 8 AA3 8 PHE B 134 PHE B 142 -1 N GLN B 140 O TYR B 150
SHEET 1 AA4 2 VAL B 13 GLY B 15 0
SHEET 2 AA4 2 VAL B 125 TYR B 126 -1 O VAL B 125 N ILE B 14
LINK OG SER B 104 CA CA B 206 1555 5674 2.99
CISPEP 1 GLY A 97 GLY A 98 0 0.11
CISPEP 2 GLY B 97 GLY B 98 0 2.66
SITE 1 AC1 31 VAL A 6 ALA A 7 ILE A 14 GLY A 15
SITE 2 AC1 31 ASN A 16 GLY A 17 PRO A 18 ASP A 19
SITE 3 AC1 31 ILE A 20 GLY A 43 ARG A 44 LYS A 45
SITE 4 AC1 31 THR A 46 MET A 50 VAL A 61 THR A 62
SITE 5 AC1 31 ARG A 63 SER A 64 PRO A 77 SER A 78
SITE 6 AC1 31 ILE A 79 SER A 96 GLY A 98 GLY A 99
SITE 7 AC1 31 GLU A 100 ILE A 101 TYR A 102 6DR A 202
SITE 8 AC1 31 6DR A 203 CA A 205 HOH A 326
SITE 1 AC2 15 MET A 5 VAL A 6 ALA A 7 PRO A 18
SITE 2 AC2 15 ILE A 20 GLU A 27 GLN A 28 PHE A 31
SITE 3 AC2 15 SER A 49 MET A 50 SER A 96 TYR A 102
SITE 4 AC2 15 NAP A 201 6DR A 203 HOH A 332
SITE 1 AC3 13 MET A 5 VAL A 6 ALA A 7 GLU A 27
SITE 2 AC3 13 GLN A 28 PHE A 31 THR A 46 MET A 50
SITE 3 AC3 13 GLY A 51 LEU A 53 TYR A 102 NAP A 201
SITE 4 AC3 13 6DR A 202
SITE 1 AC4 2 LYS A 88 ASP A 91
SITE 1 AC5 3 ILE A 79 LYS A 80 NAP A 201
SITE 1 AC6 37 VAL B 6 ALA B 7 ILE B 14 GLY B 15
SITE 2 AC6 37 GLY B 17 PRO B 18 ASP B 19 ILE B 20
SITE 3 AC6 37 GLY B 43 ARG B 44 LYS B 45 THR B 46
SITE 4 AC6 37 MET B 50 VAL B 61 THR B 62 ARG B 63
SITE 5 AC6 37 SER B 64 PRO B 77 SER B 78 SER B 96
SITE 6 AC6 37 GLY B 98 GLY B 99 GLU B 100 ILE B 101
SITE 7 AC6 37 TYR B 102 GLU B 129 6DR B 202 6DR B 203
SITE 8 AC6 37 CA B 206 HOH B 308 HOH B 310 HOH B 312
SITE 9 AC6 37 HOH B 321 HOH B 325 HOH B 344 HOH B 353
SITE 10 AC6 37 HOH B 363
SITE 1 AC7 15 MET B 5 VAL B 6 PRO B 18 ILE B 20
SITE 2 AC7 15 GLU B 27 GLN B 28 PHE B 31 SER B 49
SITE 3 AC7 15 MET B 50 LEU B 53 SER B 96 TYR B 102
SITE 4 AC7 15 NAP B 201 6DR B 203 HOH B 354
SITE 1 AC8 15 MET B 5 VAL B 6 ALA B 7 GLU B 27
SITE 2 AC8 15 GLN B 28 PHE B 31 THR B 46 MET B 50
SITE 3 AC8 15 GLY B 51 LEU B 53 TYR B 58 SER B 96
SITE 4 AC8 15 TYR B 102 NAP B 201 6DR B 202
SITE 1 AC9 3 LYS B 45 ASP B 124 HOH B 325
SITE 1 AD1 1 LYS B 103
SITE 1 AD2 4 SER B 104 PRO B 128 GLU B 129 NAP B 201
CRYST1 76.199 76.199 113.784 90.00 90.00 120.00 P 31 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013124 0.007577 0.000000 0.00000
SCALE2 0.000000 0.015154 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008789 0.00000