HEADER HYDROLASE/RNA 20-OCT-15 5ED2 TITLE HUMAN ADENOSINE DEAMINASE ACTING ON DSRNA (ADAR2) MUTANT E488Q BOUND TITLE 2 TO DSRNA SEQUENCE DERIVED FROM HUMAN GLI1 GENE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: A TO I EDITASE (UNP RESIDUES 327-729); COMPND 5 SYNONYM: ADENOSINE DEAMINASE ACTING ON RNA; COMPND 6 EC: 3.5.4.37; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RNA (5'-R(P*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*UP*(8AZ) COMPND 11 P*GP*AP*GP*GP*GP*CP*UP*CP*UP*G)-3'); COMPND 12 CHAIN: B, E; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: RNA (5'- COMPND 16 R(P*CP*AP*GP*AP*GP*CP*CP*CP*CP*CP*CP*AP*GP*CP*AP*UP*CP*GP*CP*GP*AP*GP COMPND 17 *C)-3'); COMPND 18 CHAIN: C, F; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADAR2, DRADA2, RED1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_COMMON: YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BCY123; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSC; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606 KEYWDS DEAMINASE, HUMAN, HYDROLASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.M.MATTHEWS,A.J.FISHER REVDAT 7 27-SEP-23 5ED2 1 REMARK REVDAT 6 14-OCT-20 5ED2 1 HETSYN LINK REVDAT 5 25-DEC-19 5ED2 1 REMARK REVDAT 4 13-SEP-17 5ED2 1 REMARK REVDAT 3 18-MAY-16 5ED2 1 JRNL REVDAT 2 27-APR-16 5ED2 1 JRNL REVDAT 1 13-APR-16 5ED2 0 JRNL AUTH M.M.MATTHEWS,J.M.THOMAS,Y.ZHENG,K.TRAN,K.J.PHELPS,A.I.SCOTT, JRNL AUTH 2 J.HAVEL,A.J.FISHER,P.A.BEAL JRNL TITL STRUCTURES OF HUMAN ADAR2 BOUND TO DSRNA REVEAL JRNL TITL 2 BASE-FLIPPING MECHANISM AND BASIS FOR SITE SELECTIVITY. JRNL REF NAT.STRUCT.MOL.BIOL. V. 23 426 2016 JRNL REFN ESSN 1545-9985 JRNL PMID 27065196 JRNL DOI 10.1038/NSMB.3203 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 35272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1742 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5685 - 6.7437 0.97 2964 145 0.1506 0.1529 REMARK 3 2 6.7437 - 5.3569 0.99 2828 177 0.1691 0.2001 REMARK 3 3 5.3569 - 4.6810 0.97 2774 143 0.1579 0.1771 REMARK 3 4 4.6810 - 4.2535 0.99 2804 172 0.1527 0.1781 REMARK 3 5 4.2535 - 3.9489 0.99 2792 141 0.1721 0.2122 REMARK 3 6 3.9489 - 3.7163 0.96 2745 133 0.1990 0.1889 REMARK 3 7 3.7163 - 3.5303 0.99 2809 138 0.2066 0.2069 REMARK 3 8 3.5303 - 3.3767 1.00 2768 172 0.2290 0.2856 REMARK 3 9 3.3767 - 3.2468 1.00 2798 127 0.2517 0.2964 REMARK 3 10 3.2468 - 3.1348 0.99 2789 127 0.2852 0.3346 REMARK 3 11 3.1348 - 3.0368 0.96 2702 126 0.2997 0.3146 REMARK 3 12 3.0368 - 2.9500 0.98 2757 141 0.3411 0.4169 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8420 REMARK 3 ANGLE : 0.885 11838 REMARK 3 CHIRALITY : 0.034 1396 REMARK 3 PLANARITY : 0.004 1166 REMARK 3 DIHEDRAL : 15.220 3432 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 34 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 316:321) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2001 38.0965 103.0173 REMARK 3 T TENSOR REMARK 3 T11: 1.4192 T22: 1.0732 REMARK 3 T33: 0.9645 T12: 0.0706 REMARK 3 T13: -0.0805 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.9916 L22: 2.0046 REMARK 3 L33: 5.8064 L12: 2.0174 REMARK 3 L13: 8.6938 L23: 8.2750 REMARK 3 S TENSOR REMARK 3 S11: 0.9404 S12: 0.8025 S13: -1.3335 REMARK 3 S21: 0.0659 S22: 0.0873 S23: -1.0191 REMARK 3 S31: 0.8719 S32: -0.6658 S33: -0.2820 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 322:393) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5280 37.3519 80.8116 REMARK 3 T TENSOR REMARK 3 T11: 0.4622 T22: 0.9333 REMARK 3 T33: 0.6703 T12: -0.0780 REMARK 3 T13: 0.1608 T23: 0.1563 REMARK 3 L TENSOR REMARK 3 L11: 4.8832 L22: 5.6509 REMARK 3 L33: 6.5640 L12: -0.0182 REMARK 3 L13: 0.6486 L23: -0.6382 REMARK 3 S TENSOR REMARK 3 S11: -0.1389 S12: 0.5988 S13: 0.5735 REMARK 3 S21: -0.2390 S22: 0.0034 S23: -0.7968 REMARK 3 S31: -0.8002 S32: 1.6028 S33: 0.1221 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 394:457) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1577 25.0246 87.1031 REMARK 3 T TENSOR REMARK 3 T11: 0.5060 T22: 1.2486 REMARK 3 T33: 0.7021 T12: 0.2118 REMARK 3 T13: 0.1465 T23: 0.2042 REMARK 3 L TENSOR REMARK 3 L11: 3.6729 L22: 4.7452 REMARK 3 L33: 4.0416 L12: -0.8532 REMARK 3 L13: 0.5910 L23: -0.8846 REMARK 3 S TENSOR REMARK 3 S11: -0.0844 S12: -0.0493 S13: -0.4646 REMARK 3 S21: 0.1572 S22: -0.1297 S23: -0.8306 REMARK 3 S31: 0.4824 S32: 1.4554 S33: 0.1836 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 458:466) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1265 44.7900 94.9560 REMARK 3 T TENSOR REMARK 3 T11: 0.9696 T22: 1.0988 REMARK 3 T33: 1.3816 T12: 0.3495 REMARK 3 T13: 0.1260 T23: 0.1115 REMARK 3 L TENSOR REMARK 3 L11: 3.2513 L22: 6.8175 REMARK 3 L33: 7.5561 L12: 2.0407 REMARK 3 L13: 0.0676 L23: 4.9023 REMARK 3 S TENSOR REMARK 3 S11: 1.0465 S12: 0.0259 S13: 1.9178 REMARK 3 S21: 0.9274 S22: 1.2465 S23: 1.9337 REMARK 3 S31: -0.0866 S32: -1.6370 S33: -1.0140 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 467:492) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5603 31.4941 84.9009 REMARK 3 T TENSOR REMARK 3 T11: 0.4922 T22: 0.9251 REMARK 3 T33: 0.8606 T12: 0.0999 REMARK 3 T13: 0.1402 T23: 0.3616 REMARK 3 L TENSOR REMARK 3 L11: 6.6589 L22: 2.8014 REMARK 3 L33: 7.6895 L12: -0.1869 REMARK 3 L13: -3.1891 L23: -2.6545 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.3237 S13: 0.0631 REMARK 3 S21: 0.3081 S22: 0.4591 S23: 1.0595 REMARK 3 S31: -0.5167 S32: -0.5412 S33: -0.5118 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 493:501) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6538 19.2541 72.7057 REMARK 3 T TENSOR REMARK 3 T11: 1.0667 T22: 1.1014 REMARK 3 T33: 1.0737 T12: -0.2919 REMARK 3 T13: -0.0323 T23: 0.1669 REMARK 3 L TENSOR REMARK 3 L11: 1.3735 L22: 1.3324 REMARK 3 L33: 5.8797 L12: 1.3557 REMARK 3 L13: 2.8715 L23: 2.8361 REMARK 3 S TENSOR REMARK 3 S11: 0.6642 S12: 0.4849 S13: -1.0298 REMARK 3 S21: 0.0164 S22: -0.7910 S23: 2.1501 REMARK 3 S31: 0.7036 S32: -1.3773 S33: -0.0082 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 502:700) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8320 22.9828 80.5096 REMARK 3 T TENSOR REMARK 3 T11: 0.5143 T22: 0.7220 REMARK 3 T33: 0.5486 T12: 0.2066 REMARK 3 T13: 0.1263 T23: 0.0466 REMARK 3 L TENSOR REMARK 3 L11: 6.0687 L22: 4.4857 REMARK 3 L33: 5.5198 L12: -0.7412 REMARK 3 L13: 0.3799 L23: -1.9623 REMARK 3 S TENSOR REMARK 3 S11: 0.1215 S12: 0.2909 S13: -0.6524 REMARK 3 S21: -0.6814 S22: -0.1408 S23: -0.0628 REMARK 3 S31: 0.8501 S32: 1.0245 S33: -0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7431 28.4550 91.6182 REMARK 3 T TENSOR REMARK 3 T11: 0.7306 T22: 1.3496 REMARK 3 T33: 1.3034 T12: -0.0828 REMARK 3 T13: 0.3129 T23: 0.6541 REMARK 3 L TENSOR REMARK 3 L11: 4.6815 L22: 2.0400 REMARK 3 L33: 4.2971 L12: -2.5046 REMARK 3 L13: 4.3182 L23: -0.6550 REMARK 3 S TENSOR REMARK 3 S11: 1.2632 S12: 1.1703 S13: 0.8141 REMARK 3 S21: 0.2876 S22: 0.8639 S23: 2.1674 REMARK 3 S31: -0.7399 S32: -0.8668 S33: -1.3439 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0313 37.0651 79.7293 REMARK 3 T TENSOR REMARK 3 T11: 0.9802 T22: 1.9500 REMARK 3 T33: 1.5280 T12: -0.0211 REMARK 3 T13: 0.0515 T23: 0.9982 REMARK 3 L TENSOR REMARK 3 L11: 4.5105 L22: 4.9989 REMARK 3 L33: 5.5383 L12: -0.3555 REMARK 3 L13: -3.0314 L23: 4.4613 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: 1.8041 S13: 1.5791 REMARK 3 S21: -0.4723 S22: 0.6486 S23: 1.1733 REMARK 3 S31: 1.0681 S32: 0.1057 S33: -0.2348 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 9:15) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2730 42.4973 76.6541 REMARK 3 T TENSOR REMARK 3 T11: 0.7858 T22: 1.1132 REMARK 3 T33: 1.3785 T12: 0.2589 REMARK 3 T13: 0.4222 T23: 0.8301 REMARK 3 L TENSOR REMARK 3 L11: 4.7410 L22: 0.5059 REMARK 3 L33: 3.0225 L12: -0.9303 REMARK 3 L13: -1.1137 L23: 1.0035 REMARK 3 S TENSOR REMARK 3 S11: 0.3970 S12: 0.3840 S13: 0.2212 REMARK 3 S21: -0.2599 S22: 0.7587 S23: 1.6049 REMARK 3 S31: -1.4424 S32: -0.7033 S33: -0.8956 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 16:19) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9156 48.8136 60.1307 REMARK 3 T TENSOR REMARK 3 T11: 1.2334 T22: 1.5919 REMARK 3 T33: 1.2609 T12: -0.1098 REMARK 3 T13: 0.1098 T23: 0.6644 REMARK 3 L TENSOR REMARK 3 L11: 2.8900 L22: 9.2512 REMARK 3 L33: 4.8625 L12: 4.7876 REMARK 3 L13: -1.0318 L23: -4.2538 REMARK 3 S TENSOR REMARK 3 S11: 0.3527 S12: 0.6798 S13: 1.5926 REMARK 3 S21: -0.4526 S22: -0.0122 S23: 2.1547 REMARK 3 S31: -0.6786 S32: 1.1972 S33: -0.5171 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0779 60.9362 62.3497 REMARK 3 T TENSOR REMARK 3 T11: 1.3338 T22: 0.9175 REMARK 3 T33: 1.2021 T12: -0.1338 REMARK 3 T13: 0.4027 T23: 0.1859 REMARK 3 L TENSOR REMARK 3 L11: 4.3374 L22: 2.0458 REMARK 3 L33: 7.8702 L12: 0.0318 REMARK 3 L13: 1.3862 L23: 3.2454 REMARK 3 S TENSOR REMARK 3 S11: -1.4831 S12: 0.9076 S13: 0.9257 REMARK 3 S21: -1.2559 S22: 2.0633 S23: -0.1978 REMARK 3 S31: -1.7829 S32: 0.0401 S33: -0.4507 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN C AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1072 52.2004 64.5188 REMARK 3 T TENSOR REMARK 3 T11: 1.4076 T22: 1.3952 REMARK 3 T33: 1.2812 T12: -0.3967 REMARK 3 T13: 0.5882 T23: 0.4325 REMARK 3 L TENSOR REMARK 3 L11: 4.3905 L22: 5.2918 REMARK 3 L33: 2.0383 L12: -1.7165 REMARK 3 L13: -2.4966 L23: -5.7961 REMARK 3 S TENSOR REMARK 3 S11: -1.2337 S12: 0.2588 S13: 0.0828 REMARK 3 S21: -1.5096 S22: 1.8257 S23: 0.5253 REMARK 3 S31: 0.1323 S32: -1.1481 S33: -0.4900 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN C AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8695 54.3779 68.1667 REMARK 3 T TENSOR REMARK 3 T11: 0.9573 T22: 1.2129 REMARK 3 T33: 1.4356 T12: 0.0519 REMARK 3 T13: 0.2748 T23: 0.5324 REMARK 3 L TENSOR REMARK 3 L11: 6.6634 L22: 4.5787 REMARK 3 L33: 4.5301 L12: 5.3625 REMARK 3 L13: 1.9533 L23: 1.3816 REMARK 3 S TENSOR REMARK 3 S11: -0.3658 S12: -0.2526 S13: 0.4474 REMARK 3 S21: 0.1396 S22: 0.9589 S23: 2.1876 REMARK 3 S31: -1.0093 S32: -0.2816 S33: -0.5080 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN C AND RESID 9:14) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7478 37.6499 72.8657 REMARK 3 T TENSOR REMARK 3 T11: 0.7206 T22: 1.2727 REMARK 3 T33: 1.1896 T12: 0.0978 REMARK 3 T13: 0.1321 T23: 0.5708 REMARK 3 L TENSOR REMARK 3 L11: 2.1244 L22: 4.8992 REMARK 3 L33: 7.7570 L12: -0.8814 REMARK 3 L13: -0.2092 L23: -4.4764 REMARK 3 S TENSOR REMARK 3 S11: 0.2428 S12: 1.0946 S13: 1.0179 REMARK 3 S21: -0.3550 S22: 1.1394 S23: 1.9960 REMARK 3 S31: -0.7698 S32: -1.5286 S33: -1.3933 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN C AND RESID 15:19) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5385 40.8652 88.1494 REMARK 3 T TENSOR REMARK 3 T11: 0.7378 T22: 1.3903 REMARK 3 T33: 1.7310 T12: 0.3084 REMARK 3 T13: 0.4023 T23: 0.4670 REMARK 3 L TENSOR REMARK 3 L11: 0.4236 L22: 1.5836 REMARK 3 L33: 3.3365 L12: -0.8348 REMARK 3 L13: 1.2571 L23: -2.4156 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.2793 S13: 1.7323 REMARK 3 S21: -0.0491 S22: 0.3797 S23: 1.1345 REMARK 3 S31: 0.4347 S32: -1.8297 S33: -0.2717 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN C AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3323 28.0456 90.2637 REMARK 3 T TENSOR REMARK 3 T11: 0.7480 T22: 1.9737 REMARK 3 T33: 1.5593 T12: -0.0798 REMARK 3 T13: 0.2090 T23: 0.8298 REMARK 3 L TENSOR REMARK 3 L11: 6.6820 L22: 1.2162 REMARK 3 L33: 4.5560 L12: 2.7528 REMARK 3 L13: -1.6686 L23: -1.1402 REMARK 3 S TENSOR REMARK 3 S11: 1.0117 S12: 0.5180 S13: 1.0635 REMARK 3 S21: 1.0227 S22: 0.0640 S23: 0.8359 REMARK 3 S31: -0.3059 S32: -0.4579 S33: -0.3780 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN D AND RESID 316:320) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9506 27.8479 39.1417 REMARK 3 T TENSOR REMARK 3 T11: 1.0514 T22: 1.1935 REMARK 3 T33: 0.8670 T12: 0.0372 REMARK 3 T13: -0.1293 T23: 0.0857 REMARK 3 L TENSOR REMARK 3 L11: 1.9897 L22: 7.2298 REMARK 3 L33: 4.4674 L12: -9.2293 REMARK 3 L13: 7.2784 L23: -5.6878 REMARK 3 S TENSOR REMARK 3 S11: 0.5305 S12: -0.7024 S13: -1.7680 REMARK 3 S21: -0.6455 S22: 0.6261 S23: 1.7908 REMARK 3 S31: -0.2037 S32: -0.7849 S33: -0.8354 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN D AND RESID 321:405) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0640 26.8253 16.3815 REMARK 3 T TENSOR REMARK 3 T11: 0.7245 T22: 0.4417 REMARK 3 T33: 0.5637 T12: -0.0471 REMARK 3 T13: 0.0975 T23: -0.2167 REMARK 3 L TENSOR REMARK 3 L11: 4.5156 L22: 5.0016 REMARK 3 L33: 4.0798 L12: 0.1752 REMARK 3 L13: 1.2999 L23: -1.5141 REMARK 3 S TENSOR REMARK 3 S11: 0.3181 S12: -0.0683 S13: -0.3179 REMARK 3 S21: -0.2901 S22: -0.1418 S23: -0.4516 REMARK 3 S31: 0.3479 S32: 0.2859 S33: -0.1334 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN D AND RESID 406:468) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5597 25.6861 25.7286 REMARK 3 T TENSOR REMARK 3 T11: 0.8004 T22: 0.7374 REMARK 3 T33: 0.3672 T12: -0.1393 REMARK 3 T13: 0.0170 T23: -0.1169 REMARK 3 L TENSOR REMARK 3 L11: 6.2520 L22: 8.3040 REMARK 3 L33: 2.9675 L12: 3.4306 REMARK 3 L13: -1.2520 L23: -3.2206 REMARK 3 S TENSOR REMARK 3 S11: 0.7454 S12: -0.9623 S13: -0.3785 REMARK 3 S21: 0.9968 S22: -0.6439 S23: -0.0917 REMARK 3 S31: 0.0423 S32: 0.0021 S33: -0.0739 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN D AND RESID 469:493) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8235 51.1880 15.9095 REMARK 3 T TENSOR REMARK 3 T11: 0.9391 T22: 0.6500 REMARK 3 T33: 0.7705 T12: 0.0174 REMARK 3 T13: 0.2363 T23: -0.2406 REMARK 3 L TENSOR REMARK 3 L11: 3.2772 L22: 9.8684 REMARK 3 L33: 4.4208 L12: 0.4790 REMARK 3 L13: -1.0263 L23: 6.1156 REMARK 3 S TENSOR REMARK 3 S11: 0.2223 S12: -0.5728 S13: 0.8937 REMARK 3 S21: -0.1712 S22: 0.4579 S23: -0.2792 REMARK 3 S31: -0.6380 S32: 0.5339 S33: -0.5518 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN D AND RESID 494:509) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6676 44.1055 -0.3008 REMARK 3 T TENSOR REMARK 3 T11: 1.3643 T22: 1.1770 REMARK 3 T33: 1.1226 T12: 0.0690 REMARK 3 T13: -0.2091 T23: 0.1044 REMARK 3 L TENSOR REMARK 3 L11: 8.5818 L22: 8.0171 REMARK 3 L33: 3.2940 L12: 0.6119 REMARK 3 L13: -0.3884 L23: -1.2891 REMARK 3 S TENSOR REMARK 3 S11: -0.6772 S12: 1.2089 S13: 1.4396 REMARK 3 S21: -0.8941 S22: 0.7375 S23: 0.5098 REMARK 3 S31: -1.1840 S32: -0.2255 S33: -0.3128 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN D AND RESID 510:616) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5419 34.1644 20.4748 REMARK 3 T TENSOR REMARK 3 T11: 0.6249 T22: 0.4771 REMARK 3 T33: 0.4842 T12: -0.1600 REMARK 3 T13: 0.0563 T23: -0.1652 REMARK 3 L TENSOR REMARK 3 L11: 3.4288 L22: 5.1970 REMARK 3 L33: 3.7387 L12: 0.3687 REMARK 3 L13: -0.6205 L23: -0.6767 REMARK 3 S TENSOR REMARK 3 S11: 0.3083 S12: -0.4506 S13: 0.2914 REMARK 3 S21: 0.2875 S22: -0.0477 S23: -0.2540 REMARK 3 S31: 0.0938 S32: 0.0047 S33: -0.2098 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN D AND RESID 617:700) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5710 26.6788 11.6505 REMARK 3 T TENSOR REMARK 3 T11: 0.7284 T22: 0.6920 REMARK 3 T33: 0.6884 T12: -0.2004 REMARK 3 T13: -0.1144 T23: -0.1314 REMARK 3 L TENSOR REMARK 3 L11: 3.5594 L22: 6.9136 REMARK 3 L33: 2.8740 L12: 0.9758 REMARK 3 L13: -0.2699 L23: 0.3844 REMARK 3 S TENSOR REMARK 3 S11: 0.0536 S12: 0.4460 S13: -0.2407 REMARK 3 S21: -0.5911 S22: -0.0303 S23: 1.2617 REMARK 3 S31: 0.6727 S32: -0.6680 S33: 0.0190 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: (CHAIN E AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4950 65.3513 21.9383 REMARK 3 T TENSOR REMARK 3 T11: 1.3175 T22: 0.9665 REMARK 3 T33: 1.3252 T12: 0.1174 REMARK 3 T13: 0.4596 T23: -0.5018 REMARK 3 L TENSOR REMARK 3 L11: 7.4618 L22: 2.0361 REMARK 3 L33: 4.2207 L12: -0.5029 REMARK 3 L13: -5.2578 L23: -1.8560 REMARK 3 S TENSOR REMARK 3 S11: 0.9701 S12: -1.3437 S13: 2.5021 REMARK 3 S21: -1.4659 S22: 0.9528 S23: -0.4146 REMARK 3 S31: -1.1362 S32: 1.0386 S33: -1.1810 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: (CHAIN E AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6544 68.6318 9.6242 REMARK 3 T TENSOR REMARK 3 T11: 2.1622 T22: 1.1799 REMARK 3 T33: 1.5597 T12: 0.2645 REMARK 3 T13: 0.8443 T23: -0.1134 REMARK 3 L TENSOR REMARK 3 L11: 3.8423 L22: 6.8796 REMARK 3 L33: 7.4515 L12: 1.6431 REMARK 3 L13: -0.7120 L23: -1.6535 REMARK 3 S TENSOR REMARK 3 S11: -0.1344 S12: 0.8125 S13: 0.5059 REMARK 3 S21: -1.8453 S22: -0.2245 S23: -1.6335 REMARK 3 S31: -0.3628 S32: -1.2530 S33: 0.5939 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: (CHAIN E AND RESID 9:15) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4749 50.3332 8.6455 REMARK 3 T TENSOR REMARK 3 T11: 0.9659 T22: 0.6728 REMARK 3 T33: 1.2908 T12: -0.0196 REMARK 3 T13: 0.4983 T23: -0.2551 REMARK 3 L TENSOR REMARK 3 L11: 0.4120 L22: 5.7358 REMARK 3 L33: 5.8527 L12: 0.8662 REMARK 3 L13: 0.8910 L23: 0.5771 REMARK 3 S TENSOR REMARK 3 S11: 0.6067 S12: 0.0272 S13: 1.5120 REMARK 3 S21: -0.4298 S22: 0.0859 S23: -0.8775 REMARK 3 S31: -0.5911 S32: 0.6948 S33: -0.7307 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: (CHAIN E AND RESID 16:19) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5694 44.6222 -7.5367 REMARK 3 T TENSOR REMARK 3 T11: 1.7702 T22: 1.3033 REMARK 3 T33: 1.2377 T12: 0.3582 REMARK 3 T13: 0.6330 T23: -0.2096 REMARK 3 L TENSOR REMARK 3 L11: 7.0807 L22: 2.8339 REMARK 3 L33: 2.7233 L12: -2.3491 REMARK 3 L13: 1.1412 L23: -2.7168 REMARK 3 S TENSOR REMARK 3 S11: 0.1986 S12: 0.8225 S13: 1.8413 REMARK 3 S21: -0.8424 S22: -0.1327 S23: -1.1849 REMARK 3 S31: 0.9734 S32: 0.5452 S33: 0.0374 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: (CHAIN E AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): 39.4755 34.8277 -4.4612 REMARK 3 T TENSOR REMARK 3 T11: 1.1882 T22: 1.0379 REMARK 3 T33: 1.3619 T12: 0.3022 REMARK 3 T13: 0.3479 T23: -0.3135 REMARK 3 L TENSOR REMARK 3 L11: 8.6303 L22: 2.6563 REMARK 3 L33: 2.0496 L12: 2.3526 REMARK 3 L13: 2.9215 L23: 5.1609 REMARK 3 S TENSOR REMARK 3 S11: 2.2261 S12: 2.2903 S13: 0.2175 REMARK 3 S21: 0.4501 S22: -1.3631 S23: -0.3624 REMARK 3 S31: 0.3579 S32: 0.4406 S33: -0.7770 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: (CHAIN F AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1202 32.0599 -1.7423 REMARK 3 T TENSOR REMARK 3 T11: 1.0460 T22: 0.9997 REMARK 3 T33: 1.8087 T12: 0.2130 REMARK 3 T13: 0.8243 T23: -1.0175 REMARK 3 L TENSOR REMARK 3 L11: 3.9814 L22: 4.4494 REMARK 3 L33: 8.4677 L12: 0.5828 REMARK 3 L13: -3.5201 L23: 4.2639 REMARK 3 S TENSOR REMARK 3 S11: 0.3446 S12: 1.4204 S13: -0.0053 REMARK 3 S21: -0.1225 S22: -0.5508 S23: -0.3321 REMARK 3 S31: -1.0485 S32: -0.8902 S33: -0.0429 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: (CHAIN F AND RESID 5:10) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7849 49.3104 -0.6474 REMARK 3 T TENSOR REMARK 3 T11: 1.3135 T22: 0.7377 REMARK 3 T33: 1.6100 T12: 0.0916 REMARK 3 T13: 0.5591 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 2.1104 L22: 7.0517 REMARK 3 L33: 1.2417 L12: -7.3005 REMARK 3 L13: -0.3289 L23: -0.2637 REMARK 3 S TENSOR REMARK 3 S11: 0.0691 S12: -0.1863 S13: 2.5837 REMARK 3 S21: -0.2528 S22: 0.0029 S23: -2.8897 REMARK 3 S31: -0.3703 S32: -0.1844 S33: -0.0397 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: (CHAIN F AND RESID 11:14) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5355 54.0897 7.5836 REMARK 3 T TENSOR REMARK 3 T11: 1.0587 T22: 0.5976 REMARK 3 T33: 0.8623 T12: 0.0496 REMARK 3 T13: 0.3192 T23: -0.1005 REMARK 3 L TENSOR REMARK 3 L11: 5.4927 L22: 5.2783 REMARK 3 L33: 5.9259 L12: -2.2537 REMARK 3 L13: -0.9334 L23: 2.7299 REMARK 3 S TENSOR REMARK 3 S11: 0.9741 S12: -0.1089 S13: 1.7093 REMARK 3 S21: -0.4881 S22: -0.1554 S23: -0.0381 REMARK 3 S31: 1.1286 S32: 0.7012 S33: -0.5814 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: (CHAIN F AND RESID 15:19) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8817 66.4065 18.2860 REMARK 3 T TENSOR REMARK 3 T11: 1.5596 T22: 0.6828 REMARK 3 T33: 1.9969 T12: -0.0953 REMARK 3 T13: 0.7137 T23: -0.4865 REMARK 3 L TENSOR REMARK 3 L11: 0.0133 L22: 0.1721 REMARK 3 L33: -0.0020 L12: 0.0591 REMARK 3 L13: -0.0577 L23: 0.0026 REMARK 3 S TENSOR REMARK 3 S11: 1.4185 S12: -1.2652 S13: 2.8273 REMARK 3 S21: -0.7719 S22: -0.3328 S23: -1.6963 REMARK 3 S31: -2.1961 S32: -0.3714 S33: -0.7655 REMARK 3 TLS GROUP : 34 REMARK 3 SELECTION: (CHAIN F AND RESID 20:23) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3266 74.5899 19.5826 REMARK 3 T TENSOR REMARK 3 T11: 2.0389 T22: 0.9930 REMARK 3 T33: 1.6706 T12: 0.3387 REMARK 3 T13: 0.7893 T23: -0.1463 REMARK 3 L TENSOR REMARK 3 L11: 3.4957 L22: 4.1100 REMARK 3 L33: 6.9278 L12: -3.1453 REMARK 3 L13: 2.1011 L23: 0.7984 REMARK 3 S TENSOR REMARK 3 S11: -0.5099 S12: -1.5286 S13: 2.0387 REMARK 3 S21: -1.0509 S22: 0.4427 S23: -1.4512 REMARK 3 S31: -0.1369 S32: -0.4544 S33: 0.3199 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ED2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35355 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.190 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.13 REMARK 200 R MERGE FOR SHELL (I) : 1.35100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ZY7 REMARK 200 REMARK 200 REMARK: DIAMOND-SHAPED PRISM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES/NAOH, PH 6.5, 12% PEG20000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.56500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.30900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.80700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 128.30900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.56500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.80700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 299 REMARK 465 HIS A 300 REMARK 465 LEU A 301 REMARK 465 ASP A 302 REMARK 465 GLN A 303 REMARK 465 THR A 304 REMARK 465 PRO A 305 REMARK 465 SER A 306 REMARK 465 ARG A 307 REMARK 465 GLN A 308 REMARK 465 PRO A 309 REMARK 465 ILE A 310 REMARK 465 PRO A 311 REMARK 465 SER A 312 REMARK 465 GLU A 313 REMARK 465 GLY A 314 REMARK 465 LEU A 315 REMARK 465 PRO A 701 REMARK 465 LEU D 299 REMARK 465 HIS D 300 REMARK 465 LEU D 301 REMARK 465 ASP D 302 REMARK 465 GLN D 303 REMARK 465 THR D 304 REMARK 465 PRO D 305 REMARK 465 SER D 306 REMARK 465 ARG D 307 REMARK 465 GLN D 308 REMARK 465 PRO D 309 REMARK 465 ILE D 310 REMARK 465 PRO D 311 REMARK 465 SER D 312 REMARK 465 GLU D 313 REMARK 465 GLY D 314 REMARK 465 LEU D 315 REMARK 465 PRO D 701 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 316 CG CD OE1 NE2 REMARK 470 LEU A 317 CG CD1 CD2 REMARK 470 GLN D 316 CG CD OE1 NE2 REMARK 470 LEU D 317 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 339 40.33 -140.33 REMARK 500 ASP A 365 40.15 -89.63 REMARK 500 LEU A 415 55.67 -112.69 REMARK 500 ASN A 416 -47.42 -130.16 REMARK 500 SER A 458 79.11 55.94 REMARK 500 ARG A 470 -16.88 74.14 REMARK 500 PRO A 492 171.47 -58.29 REMARK 500 ASN A 496 42.95 -99.75 REMARK 500 GLN A 507 36.00 -91.02 REMARK 500 TYR A 561 -38.79 -144.14 REMARK 500 THR A 653 -73.31 36.22 REMARK 500 ASN A 656 -63.00 -136.95 REMARK 500 THR D 339 40.25 -141.07 REMARK 500 ASP D 365 42.00 -91.65 REMARK 500 LEU D 415 56.15 -110.75 REMARK 500 ASN D 416 -49.39 -131.00 REMARK 500 SER D 458 79.04 53.98 REMARK 500 ARG D 470 -17.58 72.16 REMARK 500 ASN D 496 41.63 -98.54 REMARK 500 GLN D 507 -150.68 -89.49 REMARK 500 TYR D 561 -39.51 -144.78 REMARK 500 THR D 653 -57.77 36.61 REMARK 500 ASN D 656 -64.22 -137.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 394 ND1 REMARK 620 2 CYS A 451 SG 107.8 REMARK 620 3 CYS A 516 SG 105.4 101.7 REMARK 620 4 8AZ B 13 O6 125.6 108.5 105.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 394 ND1 REMARK 620 2 CYS D 451 SG 104.9 REMARK 620 3 CYS D 516 SG 110.9 97.3 REMARK 620 4 8AZ E 13 O6 135.7 104.3 97.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP D 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide 8AZ E 13 and G E REMARK 800 14 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ED1 RELATED DB: PDB DBREF 5ED2 A 299 701 UNP P78563 RED1_HUMAN 327 729 DBREF 5ED2 B 1 23 PDB 5ED2 5ED2 1 23 DBREF 5ED2 C 1 23 PDB 5ED2 5ED2 1 23 DBREF 5ED2 D 299 701 UNP P78563 RED1_HUMAN 327 729 DBREF 5ED2 E 1 23 PDB 5ED2 5ED2 1 23 DBREF 5ED2 F 1 23 PDB 5ED2 5ED2 1 23 SEQADV 5ED2 GLN A 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQADV 5ED2 GLN D 488 UNP P78563 GLU 516 ENGINEERED MUTATION SEQRES 1 A 403 LEU HIS LEU ASP GLN THR PRO SER ARG GLN PRO ILE PRO SEQRES 2 A 403 SER GLU GLY LEU GLN LEU HIS LEU PRO GLN VAL LEU ALA SEQRES 3 A 403 ASP ALA VAL SER ARG LEU VAL LEU GLY LYS PHE GLY ASP SEQRES 4 A 403 LEU THR ASP ASN PHE SER SER PRO HIS ALA ARG ARG LYS SEQRES 5 A 403 VAL LEU ALA GLY VAL VAL MET THR THR GLY THR ASP VAL SEQRES 6 A 403 LYS ASP ALA LYS VAL ILE SER VAL SER THR GLY THR LYS SEQRES 7 A 403 CYS ILE ASN GLY GLU TYR MET SER ASP ARG GLY LEU ALA SEQRES 8 A 403 LEU ASN ASP CYS HIS ALA GLU ILE ILE SER ARG ARG SER SEQRES 9 A 403 LEU LEU ARG PHE LEU TYR THR GLN LEU GLU LEU TYR LEU SEQRES 10 A 403 ASN ASN LYS ASP ASP GLN LYS ARG SER ILE PHE GLN LYS SEQRES 11 A 403 SER GLU ARG GLY GLY PHE ARG LEU LYS GLU ASN VAL GLN SEQRES 12 A 403 PHE HIS LEU TYR ILE SER THR SER PRO CYS GLY ASP ALA SEQRES 13 A 403 ARG ILE PHE SER PRO HIS GLU PRO ILE LEU GLU GLU PRO SEQRES 14 A 403 ALA ASP ARG HIS PRO ASN ARG LYS ALA ARG GLY GLN LEU SEQRES 15 A 403 ARG THR LYS ILE GLU SER GLY GLN GLY THR ILE PRO VAL SEQRES 16 A 403 ARG SER ASN ALA SER ILE GLN THR TRP ASP GLY VAL LEU SEQRES 17 A 403 GLN GLY GLU ARG LEU LEU THR MET SER CYS SER ASP LYS SEQRES 18 A 403 ILE ALA ARG TRP ASN VAL VAL GLY ILE GLN GLY SER LEU SEQRES 19 A 403 LEU SER ILE PHE VAL GLU PRO ILE TYR PHE SER SER ILE SEQRES 20 A 403 ILE LEU GLY SER LEU TYR HIS GLY ASP HIS LEU SER ARG SEQRES 21 A 403 ALA MET TYR GLN ARG ILE SER ASN ILE GLU ASP LEU PRO SEQRES 22 A 403 PRO LEU TYR THR LEU ASN LYS PRO LEU LEU SER GLY ILE SEQRES 23 A 403 SER ASN ALA GLU ALA ARG GLN PRO GLY LYS ALA PRO ASN SEQRES 24 A 403 PHE SER VAL ASN TRP THR VAL GLY ASP SER ALA ILE GLU SEQRES 25 A 403 VAL ILE ASN ALA THR THR GLY LYS ASP GLU LEU GLY ARG SEQRES 26 A 403 ALA SER ARG LEU CYS LYS HIS ALA LEU TYR CYS ARG TRP SEQRES 27 A 403 MET ARG VAL HIS GLY LYS VAL PRO SER HIS LEU LEU ARG SEQRES 28 A 403 SER LYS ILE THR LYS PRO ASN VAL TYR HIS GLU SER LYS SEQRES 29 A 403 LEU ALA ALA LYS GLU TYR GLN ALA ALA LYS ALA ARG LEU SEQRES 30 A 403 PHE THR ALA PHE ILE LYS ALA GLY LEU GLY ALA TRP VAL SEQRES 31 A 403 GLU LYS PRO THR GLU GLN ASP GLN PHE SER LEU THR PRO SEQRES 1 B 23 G C U C G C G A U G C U 8AZ SEQRES 2 B 23 G A G G G C U C U G SEQRES 1 C 23 C A G A G C C C C C C A G SEQRES 2 C 23 C A U C G C G A G C SEQRES 1 D 403 LEU HIS LEU ASP GLN THR PRO SER ARG GLN PRO ILE PRO SEQRES 2 D 403 SER GLU GLY LEU GLN LEU HIS LEU PRO GLN VAL LEU ALA SEQRES 3 D 403 ASP ALA VAL SER ARG LEU VAL LEU GLY LYS PHE GLY ASP SEQRES 4 D 403 LEU THR ASP ASN PHE SER SER PRO HIS ALA ARG ARG LYS SEQRES 5 D 403 VAL LEU ALA GLY VAL VAL MET THR THR GLY THR ASP VAL SEQRES 6 D 403 LYS ASP ALA LYS VAL ILE SER VAL SER THR GLY THR LYS SEQRES 7 D 403 CYS ILE ASN GLY GLU TYR MET SER ASP ARG GLY LEU ALA SEQRES 8 D 403 LEU ASN ASP CYS HIS ALA GLU ILE ILE SER ARG ARG SER SEQRES 9 D 403 LEU LEU ARG PHE LEU TYR THR GLN LEU GLU LEU TYR LEU SEQRES 10 D 403 ASN ASN LYS ASP ASP GLN LYS ARG SER ILE PHE GLN LYS SEQRES 11 D 403 SER GLU ARG GLY GLY PHE ARG LEU LYS GLU ASN VAL GLN SEQRES 12 D 403 PHE HIS LEU TYR ILE SER THR SER PRO CYS GLY ASP ALA SEQRES 13 D 403 ARG ILE PHE SER PRO HIS GLU PRO ILE LEU GLU GLU PRO SEQRES 14 D 403 ALA ASP ARG HIS PRO ASN ARG LYS ALA ARG GLY GLN LEU SEQRES 15 D 403 ARG THR LYS ILE GLU SER GLY GLN GLY THR ILE PRO VAL SEQRES 16 D 403 ARG SER ASN ALA SER ILE GLN THR TRP ASP GLY VAL LEU SEQRES 17 D 403 GLN GLY GLU ARG LEU LEU THR MET SER CYS SER ASP LYS SEQRES 18 D 403 ILE ALA ARG TRP ASN VAL VAL GLY ILE GLN GLY SER LEU SEQRES 19 D 403 LEU SER ILE PHE VAL GLU PRO ILE TYR PHE SER SER ILE SEQRES 20 D 403 ILE LEU GLY SER LEU TYR HIS GLY ASP HIS LEU SER ARG SEQRES 21 D 403 ALA MET TYR GLN ARG ILE SER ASN ILE GLU ASP LEU PRO SEQRES 22 D 403 PRO LEU TYR THR LEU ASN LYS PRO LEU LEU SER GLY ILE SEQRES 23 D 403 SER ASN ALA GLU ALA ARG GLN PRO GLY LYS ALA PRO ASN SEQRES 24 D 403 PHE SER VAL ASN TRP THR VAL GLY ASP SER ALA ILE GLU SEQRES 25 D 403 VAL ILE ASN ALA THR THR GLY LYS ASP GLU LEU GLY ARG SEQRES 26 D 403 ALA SER ARG LEU CYS LYS HIS ALA LEU TYR CYS ARG TRP SEQRES 27 D 403 MET ARG VAL HIS GLY LYS VAL PRO SER HIS LEU LEU ARG SEQRES 28 D 403 SER LYS ILE THR LYS PRO ASN VAL TYR HIS GLU SER LYS SEQRES 29 D 403 LEU ALA ALA LYS GLU TYR GLN ALA ALA LYS ALA ARG LEU SEQRES 30 D 403 PHE THR ALA PHE ILE LYS ALA GLY LEU GLY ALA TRP VAL SEQRES 31 D 403 GLU LYS PRO THR GLU GLN ASP GLN PHE SER LEU THR PRO SEQRES 1 E 23 G C U C G C G A U G C U 8AZ SEQRES 2 E 23 G A G G G C U C U G SEQRES 1 F 23 C A G A G C C C C C C A G SEQRES 2 F 23 C A U C G C G A G C HET 8AZ B 13 22 HET 8AZ E 13 22 HET IHP A 801 36 HET ZN A 802 1 HET IHP D 801 36 HET ZN D 802 1 HETNAM 8AZ 8-AZA-NEBULARINE-5'-MONOPHOSPHATE HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETNAM ZN ZINC ION HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 2 8AZ 2(C9 H14 N5 O8 P) FORMUL 7 IHP 2(C6 H18 O24 P6) FORMUL 8 ZN 2(ZN 2+) HELIX 1 AA1 LEU A 319 LEU A 338 1 20 HELIX 2 AA2 SER A 344 ARG A 348 5 5 HELIX 3 AA3 ASP A 362 LYS A 364 5 3 HELIX 4 AA4 ASN A 379 MET A 383 5 5 HELIX 5 AA5 ALA A 395 LEU A 415 1 21 HELIX 6 AA6 ASP A 420 SER A 424 5 5 HELIX 7 AA7 THR A 501 GLN A 507 1 7 HELIX 8 AA8 SER A 515 GLY A 527 1 13 HELIX 9 AA9 GLN A 529 SER A 534 1 6 HELIX 10 AB1 HIS A 552 TYR A 561 1 10 HELIX 11 AB2 GLN A 562 SER A 565 5 4 HELIX 12 AB3 CYS A 628 LYS A 642 1 15 HELIX 13 AB4 PRO A 644 LEU A 648 5 5 HELIX 14 AB5 VAL A 657 ALA A 665 1 9 HELIX 15 AB6 ALA A 665 ALA A 682 1 18 HELIX 16 AB7 PRO A 691 GLN A 696 5 6 HELIX 17 AB8 LEU D 319 LEU D 338 1 20 HELIX 18 AB9 SER D 344 ARG D 348 5 5 HELIX 19 AC1 ASP D 362 LYS D 364 5 3 HELIX 20 AC2 ASN D 379 MET D 383 5 5 HELIX 21 AC3 HIS D 394 LEU D 415 1 22 HELIX 22 AC4 ASN D 417 LYS D 422 1 6 HELIX 23 AC5 THR D 501 GLN D 507 1 7 HELIX 24 AC6 SER D 515 GLY D 527 1 13 HELIX 25 AC7 GLN D 529 SER D 534 1 6 HELIX 26 AC8 HIS D 552 TYR D 561 1 10 HELIX 27 AC9 GLN D 562 SER D 565 5 4 HELIX 28 AD1 CYS D 628 LYS D 642 1 15 HELIX 29 AD2 PRO D 644 LEU D 648 5 5 HELIX 30 AD3 VAL D 657 ALA D 665 1 9 HELIX 31 AD4 ALA D 665 ALA D 682 1 18 HELIX 32 AD5 PRO D 691 GLN D 696 5 6 SHEET 1 AA1 7 LEU A 580 SER A 582 0 SHEET 2 AA1 7 PHE A 542 LEU A 547 1 N ILE A 545 O LEU A 580 SHEET 3 AA1 7 GLN A 441 ILE A 446 1 N LEU A 444 O ILE A 546 SHEET 4 AA1 7 LEU A 352 THR A 358 -1 N GLY A 354 O TYR A 445 SHEET 5 AA1 7 ALA A 366 THR A 373 -1 O SER A 372 N ALA A 353 SHEET 6 AA1 7 PHE A 598 THR A 603 -1 O VAL A 600 N THR A 373 SHEET 7 AA1 7 GLU A 610 ASN A 613 -1 O ILE A 612 N SER A 599 SHEET 1 AA2 2 THR A 375 CYS A 377 0 SHEET 2 AA2 2 ASP A 392 HIS A 394 -1 O CYS A 393 N LYS A 376 SHEET 1 AA3 2 PHE A 426 LYS A 428 0 SHEET 2 AA3 2 PHE A 434 LEU A 436 -1 O ARG A 435 N GLN A 427 SHEET 1 AA4 3 ILE A 491 PRO A 492 0 SHEET 2 AA4 3 ARG A 481 ILE A 484 -1 N THR A 482 O ILE A 491 SHEET 3 AA4 3 LEU A 512 MET A 514 -1 O THR A 513 N LYS A 483 SHEET 1 AA5 7 LEU D 580 GLY D 583 0 SHEET 2 AA5 7 PHE D 542 LEU D 547 1 N ILE D 545 O LEU D 580 SHEET 3 AA5 7 GLN D 441 ILE D 446 1 N LEU D 444 O ILE D 546 SHEET 4 AA5 7 LEU D 352 THR D 358 -1 N GLY D 354 O TYR D 445 SHEET 5 AA5 7 ALA D 366 THR D 373 -1 O SER D 372 N ALA D 353 SHEET 6 AA5 7 PHE D 598 THR D 603 -1 O VAL D 600 N THR D 373 SHEET 7 AA5 7 GLU D 610 ASN D 613 -1 O ILE D 612 N SER D 599 SHEET 1 AA6 2 PHE D 426 LYS D 428 0 SHEET 2 AA6 2 PHE D 434 LEU D 436 -1 O ARG D 435 N GLN D 427 SHEET 1 AA7 3 ILE D 491 PRO D 492 0 SHEET 2 AA7 3 ARG D 481 ILE D 484 -1 N THR D 482 O ILE D 491 SHEET 3 AA7 3 LEU D 512 MET D 514 -1 O THR D 513 N LYS D 483 LINK O3' U B 12 P 8AZ B 13 1555 1555 1.60 LINK O3' 8AZ B 13 P G B 14 1555 1555 1.60 LINK O3' U E 12 P 8AZ E 13 1555 1555 1.60 LINK O3' 8AZ E 13 P G E 14 1555 1555 1.60 LINK ND1 HIS A 394 ZN ZN A 802 1555 1555 2.12 LINK SG CYS A 451 ZN ZN A 802 1555 1555 2.33 LINK SG CYS A 516 ZN ZN A 802 1555 1555 2.29 LINK ZN ZN A 802 O6 8AZ B 13 1555 1555 1.93 LINK ND1 HIS D 394 ZN ZN D 802 1555 1555 2.01 LINK SG CYS D 451 ZN ZN D 802 1555 1555 2.28 LINK SG CYS D 516 ZN ZN D 802 1555 1555 2.27 LINK ZN ZN D 802 O6 8AZ E 13 1555 1555 2.06 SITE 1 AC1 17 ASN A 391 ILE A 397 ARG A 400 ARG A 401 SITE 2 AC1 17 THR A 513 LYS A 519 ARG A 522 GLY A 530 SITE 3 AC1 17 SER A 531 LYS A 629 TYR A 658 LYS A 662 SITE 4 AC1 17 TYR A 668 LYS A 672 GLU A 689 LYS A 690 SITE 5 AC1 17 ASP A 695 SITE 1 AC2 5 HIS A 394 GLU A 396 CYS A 451 CYS A 516 SITE 2 AC2 5 8AZ B 13 SITE 1 AC3 18 ASN D 391 ILE D 397 ARG D 400 ARG D 401 SITE 2 AC3 18 THR D 513 LYS D 519 ARG D 522 GLY D 530 SITE 3 AC3 18 SER D 531 LYS D 629 TYR D 658 LYS D 662 SITE 4 AC3 18 TYR D 668 LYS D 672 TRP D 687 GLU D 689 SITE 5 AC3 18 LYS D 690 ASP D 695 SITE 1 AC4 4 HIS D 394 CYS D 451 CYS D 516 8AZ E 13 SITE 1 AC5 17 GLY D 374 THR D 375 LYS D 376 HIS D 394 SITE 2 AC5 17 GLU D 396 PRO D 450 CYS D 451 ARG D 455 SITE 3 AC5 17 SER D 486 GLY D 487 GLN D 488 CYS D 516 SITE 4 AC5 17 ZN D 802 U E 12 A E 15 C F 10 SITE 5 AC5 17 C F 11 CRYST1 79.130 81.614 256.618 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012637 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003897 0.00000