HEADER HYDROLASE 21-OCT-15 5EDM TITLE CRYSTAL STRUCTURE OF PROTHROMBIN DELETION MUTANT RESIDUES 154-167 ( TITLE 2 FORM I ) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTHROMBIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COAGULATION FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F2; SOURCE 6 EXPRESSION_SYSTEM: MESOCRICETUS AURATUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10036; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BABY HAMSTER KIDNEY (BHK) KEYWDS PROTHROMBIN, KRINGLE, PROTEASE, COAGULATION FACTOR, ENZYME MECHANISM, KEYWDS 2 KINETICS, STRUCTURE-FUNCTION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.POZZI,Z.CHEN,E.DI CERA REVDAT 9 15-NOV-23 5EDM 1 REMARK REVDAT 8 27-SEP-23 5EDM 1 HETSYN REVDAT 7 29-JUL-20 5EDM 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE ATOM REVDAT 6 04-DEC-19 5EDM 1 REMARK REVDAT 5 06-SEP-17 5EDM 1 REMARK REVDAT 4 09-AUG-17 5EDM 1 JRNL REMARK REVDAT 3 30-MAR-16 5EDM 1 JRNL REVDAT 2 27-JAN-16 5EDM 1 JRNL REVDAT 1 20-JAN-16 5EDM 0 JRNL AUTH N.POZZI,Z.CHEN,E.DI CERA JRNL TITL HOW THE LINKER CONNECTING THE TWO KRINGLES INFLUENCES JRNL TITL 2 ACTIVATION AND CONFORMATIONAL PLASTICITY OF PROTHROMBIN. JRNL REF J.BIOL.CHEM. V. 291 6071 2016 JRNL REFN ESSN 1083-351X JRNL PMID 26763231 JRNL DOI 10.1074/JBC.M115.700401 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 92.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 63362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3409 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4609 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3960 REMARK 3 BIN FREE R VALUE SET COUNT : 222 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4414 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.78000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : 1.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.149 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4708 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4172 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6356 ; 1.681 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9609 ; 0.812 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 548 ; 6.623 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 217 ;36.131 ;23.641 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 732 ;16.169 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;16.922 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 683 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5217 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1069 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2198 ; 1.706 ; 3.020 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2197 ; 1.706 ; 3.019 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2744 ; 2.824 ; 4.522 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2745 ; 2.824 ; 4.523 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2510 ; 3.603 ; 3.720 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2506 ; 3.497 ; 3.713 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3607 ; 4.728 ; 5.414 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5818 ; 9.711 ;27.680 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5613 ; 9.627 ;26.645 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6067 45.3648 15.4617 REMARK 3 T TENSOR REMARK 3 T11: 0.9070 T22: 0.6172 REMARK 3 T33: 0.2624 T12: -0.0044 REMARK 3 T13: -0.0023 T23: -0.1405 REMARK 3 L TENSOR REMARK 3 L11: 4.9409 L22: 1.3028 REMARK 3 L33: 10.9528 L12: 1.5693 REMARK 3 L13: -1.4774 L23: 2.3537 REMARK 3 S TENSOR REMARK 3 S11: -0.2886 S12: 0.7663 S13: -0.6041 REMARK 3 S21: -0.2413 S22: 0.1242 S23: -0.1841 REMARK 3 S31: 0.2551 S32: -0.4842 S33: 0.1645 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): -21.5578 30.6996 17.3732 REMARK 3 T TENSOR REMARK 3 T11: 0.3692 T22: 0.0854 REMARK 3 T33: 0.0421 T12: -0.0452 REMARK 3 T13: -0.0580 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 2.7815 L22: 4.6379 REMARK 3 L33: 2.7065 L12: 3.3584 REMARK 3 L13: 1.7103 L23: 3.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.1521 S12: -0.1950 S13: -0.0291 REMARK 3 S21: 0.1603 S22: -0.0561 S23: -0.1140 REMARK 3 S31: -0.0605 S32: 0.1536 S33: -0.0960 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): -43.6934 6.8702 14.5124 REMARK 3 T TENSOR REMARK 3 T11: 0.3620 T22: 0.1132 REMARK 3 T33: 0.1761 T12: 0.0032 REMARK 3 T13: 0.0423 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 11.0123 L22: 4.6045 REMARK 3 L33: 7.5378 L12: 0.1431 REMARK 3 L13: -1.0120 L23: -1.2227 REMARK 3 S TENSOR REMARK 3 S11: 0.1778 S12: -0.4412 S13: 0.4957 REMARK 3 S21: 0.2803 S22: 0.1771 S23: 0.6789 REMARK 3 S31: -0.0587 S32: -0.7997 S33: -0.3548 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 235 REMARK 3 ORIGIN FOR THE GROUP (A): -42.4932 4.8457 15.5237 REMARK 3 T TENSOR REMARK 3 T11: 0.3004 T22: 0.0383 REMARK 3 T33: 0.0848 T12: -0.0201 REMARK 3 T13: 0.0713 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 7.0147 L22: 6.3070 REMARK 3 L33: 4.6774 L12: -0.7963 REMARK 3 L13: 1.5553 L23: -1.0952 REMARK 3 S TENSOR REMARK 3 S11: 0.0377 S12: 0.0642 S13: 0.1623 REMARK 3 S21: 0.1480 S22: 0.1389 S23: 0.2843 REMARK 3 S31: -0.1464 S32: -0.3604 S33: -0.1766 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 236 A 274 REMARK 3 ORIGIN FOR THE GROUP (A): -39.5416 -8.5558 29.7766 REMARK 3 T TENSOR REMARK 3 T11: 0.3398 T22: 0.2597 REMARK 3 T33: 0.2839 T12: 0.0178 REMARK 3 T13: 0.0269 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 5.4338 L22: 1.0055 REMARK 3 L33: 0.9580 L12: 0.4115 REMARK 3 L13: 0.2122 L23: -0.0931 REMARK 3 S TENSOR REMARK 3 S11: 0.0558 S12: -0.2406 S13: 0.1482 REMARK 3 S21: 0.1234 S22: -0.0210 S23: -0.0504 REMARK 3 S31: -0.0870 S32: 0.0856 S33: -0.0349 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 275 A 398 REMARK 3 ORIGIN FOR THE GROUP (A): -41.4927 -25.9311 20.1558 REMARK 3 T TENSOR REMARK 3 T11: 0.3255 T22: 0.0114 REMARK 3 T33: 0.1441 T12: -0.0087 REMARK 3 T13: 0.1023 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.7429 L22: 3.0166 REMARK 3 L33: 3.9499 L12: -0.2014 REMARK 3 L13: -0.5699 L23: -0.6002 REMARK 3 S TENSOR REMARK 3 S11: -0.0557 S12: 0.0008 S13: -0.2551 REMARK 3 S21: 0.3075 S22: -0.0318 S23: 0.2496 REMARK 3 S31: 0.4287 S32: -0.0885 S33: 0.0875 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 399 A 460 REMARK 3 ORIGIN FOR THE GROUP (A): -37.3680 -21.0405 19.8351 REMARK 3 T TENSOR REMARK 3 T11: 0.2450 T22: 0.0369 REMARK 3 T33: 0.0245 T12: 0.0232 REMARK 3 T13: 0.0320 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.0285 L22: 4.0088 REMARK 3 L33: 4.2306 L12: -0.8631 REMARK 3 L13: -0.4932 L23: 0.0946 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: 0.0905 S13: -0.0983 REMARK 3 S21: 0.2606 S22: 0.0251 S23: 0.0185 REMARK 3 S31: 0.3076 S32: 0.3115 S33: 0.0228 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 461 A 485 REMARK 3 ORIGIN FOR THE GROUP (A): -24.5488 -22.8076 16.6426 REMARK 3 T TENSOR REMARK 3 T11: 0.2987 T22: 0.1452 REMARK 3 T33: 0.1011 T12: 0.0842 REMARK 3 T13: -0.0265 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 8.2793 L22: 5.9940 REMARK 3 L33: 4.7235 L12: 3.1072 REMARK 3 L13: -2.4526 L23: -2.3753 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: 0.1717 S13: 0.3888 REMARK 3 S21: 0.0783 S22: 0.0788 S23: -0.2735 REMARK 3 S31: -0.3155 S32: 0.4390 S33: -0.0500 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 486 A 505 REMARK 3 ORIGIN FOR THE GROUP (A): -21.1491 -20.9378 13.5968 REMARK 3 T TENSOR REMARK 3 T11: 0.5188 T22: 0.3063 REMARK 3 T33: 0.5833 T12: -0.0673 REMARK 3 T13: 0.2169 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 3.5256 L22: 5.3371 REMARK 3 L33: 6.9945 L12: -3.5201 REMARK 3 L13: 1.2596 L23: 1.9399 REMARK 3 S TENSOR REMARK 3 S11: 0.6094 S12: 0.4873 S13: 0.2207 REMARK 3 S21: -0.8092 S22: -0.0140 S23: -0.8332 REMARK 3 S31: 0.3997 S32: 0.9811 S33: -0.5954 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 506 A 568 REMARK 3 ORIGIN FOR THE GROUP (A): -36.3913 -15.8540 20.0166 REMARK 3 T TENSOR REMARK 3 T11: 0.2989 T22: 0.0364 REMARK 3 T33: 0.0263 T12: -0.0580 REMARK 3 T13: 0.0022 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.8433 L22: 3.9782 REMARK 3 L33: 4.8722 L12: -0.6768 REMARK 3 L13: -0.6596 L23: 0.7344 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.0888 S13: 0.0099 REMARK 3 S21: 0.2856 S22: 0.0168 S23: 0.2366 REMARK 3 S31: -0.0255 S32: 0.2010 S33: -0.0104 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EDM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67055 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 92.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -0.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB CODE 4O03 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.5 AND 1.6 M MGSO4, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.15750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.15750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.94200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.34500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.94200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.34500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.15750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 54.94200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 84.34500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.15750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 54.94200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 84.34500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1087 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 243 REMARK 465 ASP A 244 REMARK 465 GLY A 245 REMARK 465 LEU A 246 REMARK 465 ASP A 247 REMARK 465 GLU A 248 REMARK 465 ASP A 249 REMARK 465 SER A 250 REMARK 465 ASP A 251 REMARK 465 ARG A 252 REMARK 465 ALA A 253 REMARK 465 ILE A 254 REMARK 465 GLU A 255 REMARK 465 GLY A 256 REMARK 465 ARG A 257 REMARK 465 THR A 258 REMARK 465 ALA A 259 REMARK 465 THR A 260 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE12 CGU A 20 O HOH A 701 1.73 REMARK 500 O HOH A 1032 O HOH A 1054 2.11 REMARK 500 O HOH A 951 O HOH A 1037 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 96 C LYS A 96 O -0.188 REMARK 500 PRO A 97 CA PRO A 97 CB -0.163 REMARK 500 PRO A 97 CG PRO A 97 CD -0.201 REMARK 500 PRO A 97 CA PRO A 97 C -0.156 REMARK 500 PRO A 97 C PRO A 97 O -0.194 REMARK 500 GLU A 98 CA GLU A 98 CB -0.237 REMARK 500 GLU A 98 CB GLU A 98 CG -0.203 REMARK 500 GLU A 98 CG GLU A 98 CD -0.128 REMARK 500 GLU A 98 CD GLU A 98 OE1 -0.091 REMARK 500 GLU A 98 CD GLU A 98 OE2 -0.096 REMARK 500 GLU A 98 C GLU A 98 O -0.220 REMARK 500 ILE A 99 C ILE A 99 O -0.227 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 78 CB - CA - C ANGL. DEV. = -15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 2 -99.52 48.58 REMARK 500 GLU A 111 -126.35 40.38 REMARK 500 LYS A 190 -55.78 -18.07 REMARK 500 HIS A 191 22.26 -142.57 REMARK 500 GLU A 202 -117.98 50.41 REMARK 500 GLU A 239 -32.39 -36.31 REMARK 500 PHE A 285 -73.84 -130.41 REMARK 500 ILE A 303 49.54 33.97 REMARK 500 SER A 318 64.02 -151.25 REMARK 500 GLU A 331 128.37 -172.30 REMARK 500 TYR A 353 86.16 -151.48 REMARK 500 HIS A 372 -55.90 -126.92 REMARK 500 GLU A 378 79.11 -106.50 REMARK 500 GLU A 400 -85.56 -95.35 REMARK 500 ASN A 401 48.17 -154.79 REMARK 500 LYS A 460 105.25 -20.48 REMARK 500 ASP A 489 3.21 -69.70 REMARK 500 CYS A 507 44.45 -145.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 606 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 14 OE12 REMARK 620 2 CGU A 14 OE22 78.9 REMARK 620 3 CGU A 19 OE11 94.1 77.8 REMARK 620 4 CGU A 19 OE21 97.4 156.9 79.8 REMARK 620 5 HOH A 770 O 148.0 74.0 96.6 114.2 REMARK 620 6 HOH A 982 O 87.7 91.0 168.0 111.7 76.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 16 OE12 REMARK 620 2 CGU A 16 OE22 98.6 REMARK 620 3 CGU A 26 OE12 101.1 156.5 REMARK 620 4 CGU A 26 OE21 98.9 89.5 74.9 REMARK 620 5 HOH A 710 O 167.1 94.0 66.0 78.2 REMARK 620 6 HOH A 744 O 100.1 116.4 72.5 144.9 76.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 20 OE12 REMARK 620 2 CGU A 20 OE22 79.8 REMARK 620 3 HOH A 701 O 47.0 112.3 REMARK 620 4 HOH A 754 O 72.6 124.5 81.7 REMARK 620 5 HOH A 914 O 123.8 81.7 94.9 153.0 REMARK 620 6 HOH A1086 O 107.8 153.2 63.4 82.0 72.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 25 OE12 REMARK 620 2 CGU A 25 OE21 83.6 REMARK 620 3 CGU A 29 OE12 73.8 154.9 REMARK 620 4 CGU A 29 OE21 83.3 91.3 75.7 REMARK 620 5 HOH A 719 O 68.9 76.7 104.3 150.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 26 OE11 REMARK 620 2 CGU A 26 OE12 47.3 REMARK 620 3 CGU A 29 OE22 102.2 124.9 REMARK 620 4 HOH A 746 O 109.4 78.3 71.8 REMARK 620 5 HOH A 958 O 117.4 146.3 84.9 131.1 REMARK 620 6 HOH A1104 O 138.8 96.0 116.4 72.3 81.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CGU A 29 O REMARK 620 2 CGU A 32 OE12 85.9 REMARK 620 3 CGU A 32 OE22 83.5 79.9 REMARK 620 4 HOH A 712 O 149.0 82.2 66.2 REMARK 620 5 HOH A 775 O 82.6 159.8 82.4 99.3 REMARK 620 6 HOH A 804 O 80.3 76.5 152.1 123.9 117.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O03 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CA2+ BOUND PROTHROMBIN DELETION MUTANT REMARK 900 RESIDUES 146-167 DBREF 5EDM A 1 565 UNP P00734 THRB_HUMAN 44 622 SEQADV 5EDM MET A 122 UNP P00734 THR 165 CONFLICT SEQADV 5EDM A UNP P00734 PRO 197 DELETION SEQADV 5EDM A UNP P00734 ARG 198 DELETION SEQADV 5EDM A UNP P00734 SER 199 DELETION SEQADV 5EDM A UNP P00734 GLU 200 DELETION SEQADV 5EDM A UNP P00734 GLY 201 DELETION SEQADV 5EDM A UNP P00734 SER 202 DELETION SEQADV 5EDM A UNP P00734 SER 203 DELETION SEQADV 5EDM A UNP P00734 VAL 204 DELETION SEQADV 5EDM A UNP P00734 ASN 205 DELETION SEQADV 5EDM A UNP P00734 LEU 206 DELETION SEQADV 5EDM A UNP P00734 SER 207 DELETION SEQADV 5EDM A UNP P00734 PRO 208 DELETION SEQADV 5EDM A UNP P00734 PRO 209 DELETION SEQADV 5EDM A UNP P00734 LEU 210 DELETION SEQADV 5EDM TYR A 566 UNP P00734 EXPRESSION TAG SEQADV 5EDM LEU A 567 UNP P00734 EXPRESSION TAG SEQADV 5EDM GLU A 568 UNP P00734 EXPRESSION TAG SEQRES 1 A 568 ALA ASN THR PHE LEU CGU CGU VAL ARG LYS GLY ASN LEU SEQRES 2 A 568 CGU ARG CGU CYS VAL CGU CGU THR CYS SER TYR CGU CGU SEQRES 3 A 568 ALA PHE CGU ALA LEU CGU SER SER THR ALA THR ASP VAL SEQRES 4 A 568 PHE TRP ALA LYS TYR THR ALA CYS GLU THR ALA ARG THR SEQRES 5 A 568 PRO ARG ASP LYS LEU ALA ALA CYS LEU GLU GLY ASN CYS SEQRES 6 A 568 ALA GLU GLY LEU GLY THR ASN TYR ARG GLY HIS VAL ASN SEQRES 7 A 568 ILE THR ARG SER GLY ILE GLU CYS GLN LEU TRP ARG SER SEQRES 8 A 568 ARG TYR PRO HIS LYS PRO GLU ILE ASN SER THR THR HIS SEQRES 9 A 568 PRO GLY ALA ASP LEU GLN GLU ASN PHE CYS ARG ASN PRO SEQRES 10 A 568 ASP SER SER THR MET GLY PRO TRP CYS TYR THR THR ASP SEQRES 11 A 568 PRO THR VAL ARG ARG GLN GLU CYS SER ILE PRO VAL CYS SEQRES 12 A 568 GLY GLN ASP GLN VAL THR VAL ALA MET THR GLU GLN CYS SEQRES 13 A 568 VAL PRO ASP ARG GLY GLN GLN TYR GLN GLY ARG LEU ALA SEQRES 14 A 568 VAL THR THR HIS GLY LEU PRO CYS LEU ALA TRP ALA SER SEQRES 15 A 568 ALA GLN ALA LYS ALA LEU SER LYS HIS GLN ASP PHE ASN SEQRES 16 A 568 SER ALA VAL GLN LEU VAL GLU ASN PHE CYS ARG ASN PRO SEQRES 17 A 568 ASP GLY ASP GLU GLU GLY VAL TRP CYS TYR VAL ALA GLY SEQRES 18 A 568 LYS PRO GLY ASP PHE GLY TYR CYS ASP LEU ASN TYR CYS SEQRES 19 A 568 GLU GLU ALA VAL GLU GLU GLU THR GLY ASP GLY LEU ASP SEQRES 20 A 568 GLU ASP SER ASP ARG ALA ILE GLU GLY ARG THR ALA THR SEQRES 21 A 568 SER GLU TYR GLN THR PHE PHE ASN PRO ARG THR PHE GLY SEQRES 22 A 568 SER GLY GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU SEQRES 23 A 568 LYS LYS SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU SEQRES 24 A 568 GLU SER TYR ILE ASP GLY ARG ILE VAL GLU GLY SER ASP SEQRES 25 A 568 ALA GLU ILE GLY MET SER PRO TRP GLN VAL MET LEU PHE SEQRES 26 A 568 ARG LYS SER PRO GLN GLU LEU LEU CYS GLY ALA SER LEU SEQRES 27 A 568 ILE SER ASP ARG TRP VAL LEU THR ALA ALA HIS CYS LEU SEQRES 28 A 568 LEU TYR PRO PRO TRP ASP LYS ASN PHE THR GLU ASN ASP SEQRES 29 A 568 LEU LEU VAL ARG ILE GLY LYS HIS SER ARG THR ARG TYR SEQRES 30 A 568 GLU ARG ASN ILE GLU LYS ILE SER MET LEU GLU LYS ILE SEQRES 31 A 568 TYR ILE HIS PRO ARG TYR ASN TRP ARG GLU ASN LEU ASP SEQRES 32 A 568 ARG ASP ILE ALA LEU MET LYS LEU LYS LYS PRO VAL ALA SEQRES 33 A 568 PHE SER ASP TYR ILE HIS PRO VAL CYS LEU PRO ASP ARG SEQRES 34 A 568 GLU THR ALA ALA SER LEU LEU GLN ALA GLY TYR LYS GLY SEQRES 35 A 568 ARG VAL THR GLY TRP GLY ASN LEU LYS GLU THR TRP THR SEQRES 36 A 568 ALA ASN VAL GLY LYS GLY GLN PRO SER VAL LEU GLN VAL SEQRES 37 A 568 VAL ASN LEU PRO ILE VAL GLU ARG PRO VAL CYS LYS ASP SEQRES 38 A 568 SER THR ARG ILE ARG ILE THR ASP ASN MET PHE CYS ALA SEQRES 39 A 568 GLY TYR LYS PRO ASP GLU GLY LYS ARG GLY ASP ALA CYS SEQRES 40 A 568 GLU GLY ASP SER GLY GLY PRO PHE VAL MET LYS SER PRO SEQRES 41 A 568 PHE ASN ASN ARG TRP TYR GLN MET GLY ILE VAL SER TRP SEQRES 42 A 568 GLY GLU GLY CYS ASP ARG ASP GLY LYS TYR GLY PHE TYR SEQRES 43 A 568 THR HIS VAL PHE ARG LEU LYS LYS TRP ILE GLN LYS VAL SEQRES 44 A 568 ILE ASP GLN PHE GLY GLU TYR LEU GLU MODRES 5EDM CGU A 6 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 7 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 14 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 16 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 19 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 20 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 25 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 26 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 29 GLU MODIFIED RESIDUE MODRES 5EDM CGU A 32 GLU MODIFIED RESIDUE HET CGU A 6 12 HET CGU A 7 12 HET CGU A 14 12 HET CGU A 16 12 HET CGU A 19 12 HET CGU A 20 12 HET CGU A 25 12 HET CGU A 26 12 HET CGU A 29 12 HET CGU A 32 12 HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET MG A 601 1 HET MG A 602 1 HET MG A 603 1 HET MG A 604 1 HET MG A 605 1 HET MG A 606 1 HET NAG A 607 14 HET SO4 A 612 5 HET SO4 A 613 5 HET SO4 A 614 5 HET SO4 A 615 5 HET SO4 A 616 5 HET SO4 A 617 5 HET SO4 A 618 5 HET SO4 A 619 5 HET GOL A 620 6 HET SO4 A 621 5 HETNAM CGU GAMMA-CARBOXY-GLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CGU 10(C6 H9 N O6) FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 4 MG 6(MG 2+) FORMUL 11 SO4 9(O4 S 2-) FORMUL 19 GOL C3 H8 O3 FORMUL 21 HOH *464(H2 O) HELIX 1 AA1 THR A 3 VAL A 18 1 16 HELIX 2 AA2 SER A 23 CGU A 32 1 10 HELIX 3 AA3 SER A 33 CYS A 47 1 15 HELIX 4 AA4 PRO A 53 GLY A 63 1 11 HELIX 5 AA5 PRO A 158 GLN A 162 5 5 HELIX 6 AA6 SER A 182 LYS A 190 1 9 HELIX 7 AA7 ALA A 237 GLU A 241 5 5 HELIX 8 AA8 ASN A 268 GLY A 273 1 6 HELIX 9 AA9 PHE A 285 SER A 289 5 5 HELIX 10 AB1 THR A 294 LEU A 298 5 5 HELIX 11 AB2 SER A 301 ARG A 306 5 6 HELIX 12 AB3 ALA A 347 CYS A 350 5 4 HELIX 13 AB4 PRO A 354 ASP A 357 5 4 HELIX 14 AB5 THR A 361 ASN A 363 5 3 HELIX 15 AB6 ASP A 428 ALA A 438 1 11 HELIX 16 AB7 GLY A 448 THR A 455 1 8 HELIX 17 AB8 GLU A 475 SER A 482 1 8 HELIX 18 AB9 GLY A 534 ASP A 538 5 5 HELIX 19 AC1 LEU A 552 LEU A 567 1 16 SHEET 1 AA1 2 TRP A 125 TYR A 127 0 SHEET 2 AA1 2 ARG A 135 GLU A 137 -1 O GLN A 136 N CYS A 126 SHEET 1 AA2 2 TRP A 216 TYR A 218 0 SHEET 2 AA2 2 PHE A 226 TYR A 228 -1 O GLY A 227 N CYS A 217 SHEET 1 AA3 7 SER A 311 ASP A 312 0 SHEET 2 AA3 7 GLN A 467 LEU A 471 -1 O VAL A 468 N SER A 311 SHEET 3 AA3 7 GLY A 442 GLY A 446 -1 N GLY A 442 O LEU A 471 SHEET 4 AA3 7 PRO A 514 LYS A 518 -1 O VAL A 516 N ARG A 443 SHEET 5 AA3 7 TRP A 525 VAL A 531 -1 O TYR A 526 N MET A 517 SHEET 6 AA3 7 GLY A 544 HIS A 548 -1 O THR A 547 N ILE A 530 SHEET 7 AA3 7 MET A 491 ALA A 494 -1 N PHE A 492 O TYR A 546 SHEET 1 AA4 7 LYS A 383 SER A 385 0 SHEET 2 AA4 7 LEU A 365 ILE A 369 -1 N ILE A 369 O LYS A 383 SHEET 3 AA4 7 GLN A 321 ARG A 326 -1 N PHE A 325 O LEU A 366 SHEET 4 AA4 7 GLU A 331 LEU A 338 -1 O CYS A 334 N LEU A 324 SHEET 5 AA4 7 TRP A 343 THR A 346 -1 O LEU A 345 N SER A 337 SHEET 6 AA4 7 ALA A 407 LEU A 411 -1 O MET A 409 N VAL A 344 SHEET 7 AA4 7 LEU A 387 ILE A 392 -1 N GLU A 388 O LYS A 410 SHEET 1 AA5 2 LEU A 352 TYR A 353 0 SHEET 2 AA5 2 LYS A 358 ASN A 359 -1 O LYS A 358 N TYR A 353 SSBOND 1 CYS A 17 CYS A 22 1555 1555 2.11 SSBOND 2 CYS A 47 CYS A 60 1555 1555 2.11 SSBOND 3 CYS A 65 CYS A 143 1555 1555 2.07 SSBOND 4 CYS A 86 CYS A 126 1555 1555 2.04 SSBOND 5 CYS A 114 CYS A 138 1555 1555 2.04 SSBOND 6 CYS A 156 CYS A 234 1555 1555 2.12 SSBOND 7 CYS A 177 CYS A 217 1555 1555 2.03 SSBOND 8 CYS A 205 CYS A 229 1555 1555 2.09 SSBOND 9 CYS A 279 CYS A 425 1555 1555 2.11 SSBOND 10 CYS A 334 CYS A 350 1555 1555 2.12 SSBOND 11 CYS A 479 CYS A 493 1555 1555 2.07 SSBOND 12 CYS A 507 CYS A 537 1555 1555 2.19 LINK C LEU A 5 N CGU A 6 1555 1555 1.33 LINK C CGU A 6 N CGU A 7 1555 1555 1.34 LINK C CGU A 7 N VAL A 8 1555 1555 1.32 LINK C LEU A 13 N CGU A 14 1555 1555 1.33 LINK C CGU A 14 N ARG A 15 1555 1555 1.33 LINK C ARG A 15 N CGU A 16 1555 1555 1.33 LINK C CGU A 16 N CYS A 17 1555 1555 1.33 LINK C VAL A 18 N CGU A 19 1555 1555 1.33 LINK C CGU A 19 N CGU A 20 1555 1555 1.33 LINK C CGU A 20 N THR A 21 1555 1555 1.32 LINK C TYR A 24 N CGU A 25 1555 1555 1.34 LINK C CGU A 25 N CGU A 26 1555 1555 1.33 LINK C CGU A 26 N ALA A 27 1555 1555 1.33 LINK C PHE A 28 N CGU A 29 1555 1555 1.33 LINK C CGU A 29 N ALA A 30 1555 1555 1.33 LINK C LEU A 31 N CGU A 32 1555 1555 1.33 LINK C CGU A 32 N SER A 33 1555 1555 1.33 LINK ND2 ASN A 78 C1 NAG A 607 1555 1555 1.40 LINK ND2 ASN A 100 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 359 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK OE12 CGU A 14 MG MG A 606 1555 1555 2.16 LINK OE22 CGU A 14 MG MG A 606 1555 1555 2.18 LINK OE12 CGU A 16 MG MG A 604 1555 1555 2.19 LINK OE22 CGU A 16 MG MG A 604 1555 1555 2.15 LINK OE11 CGU A 19 MG MG A 606 1555 1555 2.17 LINK OE21 CGU A 19 MG MG A 606 1555 1555 2.16 LINK OE12 CGU A 20 MG MG A 605 1555 1555 2.18 LINK OE22 CGU A 20 MG MG A 605 1555 1555 2.18 LINK OE12 CGU A 25 MG MG A 602 1555 1555 2.18 LINK OE21 CGU A 25 MG MG A 602 1555 1555 2.18 LINK OE11 CGU A 26 MG MG A 603 1555 1555 2.22 LINK OE12 CGU A 26 MG MG A 603 1555 1555 2.94 LINK OE12 CGU A 26 MG MG A 604 1555 1555 2.16 LINK OE21 CGU A 26 MG MG A 604 1555 1555 2.18 LINK O CGU A 29 MG MG A 601 1555 1555 2.19 LINK OE12 CGU A 29 MG MG A 602 1555 1555 2.18 LINK OE21 CGU A 29 MG MG A 602 1555 1555 2.16 LINK OE22 CGU A 29 MG MG A 603 1555 1555 2.19 LINK OE12 CGU A 32 MG MG A 601 1555 1555 2.17 LINK OE22 CGU A 32 MG MG A 601 1555 1555 2.19 LINK MG MG A 601 O HOH A 712 1555 1555 2.15 LINK MG MG A 601 O HOH A 775 1555 1555 2.14 LINK MG MG A 601 O HOH A 804 1555 1555 2.14 LINK MG MG A 602 O HOH A 719 1555 1555 2.15 LINK MG MG A 603 O HOH A 746 1555 1555 2.17 LINK MG MG A 603 O HOH A 958 1555 1555 2.15 LINK MG MG A 603 O HOH A1104 1555 1555 2.15 LINK MG MG A 604 O HOH A 710 1555 1555 2.16 LINK MG MG A 604 O HOH A 744 1555 1555 2.16 LINK MG MG A 605 O HOH A 701 1555 1555 2.16 LINK MG MG A 605 O HOH A 754 1555 1555 2.18 LINK MG MG A 605 O HOH A 914 1555 1555 2.16 LINK MG MG A 605 O HOH A1086 1555 1555 2.14 LINK MG MG A 606 O HOH A 770 1555 1555 2.15 LINK MG MG A 606 O HOH A 982 1555 1555 2.14 CISPEP 1 THR A 52 PRO A 53 0 -8.53 CISPEP 2 TYR A 93 PRO A 94 0 0.76 CISPEP 3 SER A 328 PRO A 329 0 1.09 CRYST1 109.884 168.690 144.315 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009101 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006929 0.00000