HEADER HYDROLASE/HYDROLASE INHIBITOR 22-OCT-15 5EDU TITLE CRYSTAL STRUCTURE OF HUMAN HISTONE DEACETYLASE 6 CATALYTIC DOMAIN 2 IN TITLE 2 COMPLEX WITH TRICHOSTATIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN, HISTONE DEACETYLASE 6 COMPND 3 CHIMERA; COMPND 4 CHAIN: B, A; COMPND 5 FRAGMENT: MBP + HD6 CATALYTIC DOMAIN 2 (UNP RESIDUES 479-835); COMPND 6 SYNONYM: MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN, HD6; COMPND 7 EC: 3.5.1.98; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 562, 9606; SOURCE 5 GENE: MALE, Z5632, ECS5017, HDAC6, KIAA0901, JM21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28LIC KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.HAI,D.W.CHRISTIANSON REVDAT 8 27-SEP-23 5EDU 1 REMARK REVDAT 7 30-DEC-20 5EDU 1 AUTHOR HETSYN REVDAT 6 29-JUL-20 5EDU 1 COMPND REMARK HET HETNAM REVDAT 6 2 1 FORMUL LINK SITE ATOM REVDAT 5 25-DEC-19 5EDU 1 REMARK REVDAT 4 13-SEP-17 5EDU 1 REMARK REVDAT 3 07-SEP-16 5EDU 1 JRNL REVDAT 2 10-AUG-16 5EDU 1 JRNL REVDAT 1 27-JUL-16 5EDU 0 JRNL AUTH Y.HAI,D.W.CHRISTIANSON JRNL TITL HISTONE DEACETYLASE 6 STRUCTURE AND MOLECULAR BASIS OF JRNL TITL 2 CATALYSIS AND INHIBITION. JRNL REF NAT.CHEM.BIOL. V. 12 741 2016 JRNL REFN ESSN 1552-4469 JRNL PMID 27454933 JRNL DOI 10.1038/NCHEMBIO.2134 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.3_1479 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 87.5828 - 6.8797 1.00 2782 167 0.1699 0.2299 REMARK 3 2 6.8797 - 5.4609 1.00 2631 149 0.1928 0.2406 REMARK 3 3 5.4609 - 4.7707 1.00 2647 122 0.1716 0.2544 REMARK 3 4 4.7707 - 4.3345 1.00 2610 130 0.1618 0.2037 REMARK 3 5 4.3345 - 4.0238 1.00 2582 140 0.1795 0.2332 REMARK 3 6 4.0238 - 3.7866 1.00 2531 151 0.2021 0.2764 REMARK 3 7 3.7866 - 3.5969 1.00 2571 144 0.2160 0.2684 REMARK 3 8 3.5969 - 3.4404 1.00 2589 112 0.2404 0.3323 REMARK 3 9 3.4404 - 3.3079 1.00 2531 130 0.2601 0.3193 REMARK 3 10 3.3079 - 3.1938 1.00 2597 132 0.2820 0.3217 REMARK 3 11 3.1938 - 3.0939 1.00 2499 123 0.2829 0.3869 REMARK 3 12 3.0939 - 3.0054 1.00 2594 117 0.3018 0.3634 REMARK 3 13 3.0054 - 2.9263 1.00 2489 147 0.2958 0.3868 REMARK 3 14 2.9263 - 2.8549 1.00 2548 141 0.3002 0.3574 REMARK 3 15 2.8549 - 2.7900 1.00 2518 150 0.3157 0.3854 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 11395 REMARK 3 ANGLE : 0.738 15529 REMARK 3 CHIRALITY : 0.026 1720 REMARK 3 PLANARITY : 0.003 2028 REMARK 3 DIHEDRAL : 14.618 4063 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 473 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5061 -35.6567 32.6609 REMARK 3 T TENSOR REMARK 3 T11: 0.5032 T22: 0.3853 REMARK 3 T33: 0.4002 T12: -0.0309 REMARK 3 T13: -0.0027 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 1.0543 L22: 2.2975 REMARK 3 L33: 1.7495 L12: 0.5136 REMARK 3 L13: 0.5450 L23: 0.6400 REMARK 3 S TENSOR REMARK 3 S11: 0.0196 S12: 0.0517 S13: -0.2082 REMARK 3 S21: 0.1211 S22: 0.0462 S23: 0.1043 REMARK 3 S31: 0.3235 S32: -0.0460 S33: -0.2038 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 474 THROUGH 835 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1763 -3.3987 15.4311 REMARK 3 T TENSOR REMARK 3 T11: 0.3232 T22: 0.3660 REMARK 3 T33: 0.3841 T12: 0.0170 REMARK 3 T13: -0.0324 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.1508 L22: 1.8997 REMARK 3 L33: 1.1333 L12: 0.6211 REMARK 3 L13: -0.1732 L23: -0.2516 REMARK 3 S TENSOR REMARK 3 S11: 0.0979 S12: 0.0689 S13: -0.0847 REMARK 3 S21: 0.0306 S22: -0.0706 S23: -0.1782 REMARK 3 S31: 0.0169 S32: 0.0761 S33: 0.0043 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4436 1.2143 86.1916 REMARK 3 T TENSOR REMARK 3 T11: 0.6987 T22: 0.8252 REMARK 3 T33: 0.6202 T12: -0.1379 REMARK 3 T13: 0.0659 T23: -0.2695 REMARK 3 L TENSOR REMARK 3 L11: 1.0076 L22: 0.4448 REMARK 3 L33: 1.7496 L12: 0.4461 REMARK 3 L13: -0.0278 L23: -0.6183 REMARK 3 S TENSOR REMARK 3 S11: 0.2391 S12: -0.7435 S13: 0.4164 REMARK 3 S21: 0.3792 S22: 0.0270 S23: -0.3376 REMARK 3 S31: -0.3728 S32: 0.6125 S33: 0.0616 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6298 -7.2245 64.4875 REMARK 3 T TENSOR REMARK 3 T11: 0.5687 T22: 0.4893 REMARK 3 T33: 0.5458 T12: 0.0027 REMARK 3 T13: -0.0409 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 0.3771 L22: 0.9731 REMARK 3 L33: 1.2817 L12: -0.3163 REMARK 3 L13: -0.4085 L23: 0.0552 REMARK 3 S TENSOR REMARK 3 S11: 0.1582 S12: -0.0905 S13: 0.3375 REMARK 3 S21: -0.3222 S22: -0.0876 S23: 0.2946 REMARK 3 S31: -0.4321 S32: -0.0708 S33: 0.0118 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 309 THROUGH 380 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5768 -1.1565 64.6434 REMARK 3 T TENSOR REMARK 3 T11: 0.7207 T22: 0.5656 REMARK 3 T33: 0.5547 T12: -0.0793 REMARK 3 T13: 0.0608 T23: -0.0952 REMARK 3 L TENSOR REMARK 3 L11: 0.8374 L22: 0.4696 REMARK 3 L33: 0.8634 L12: -0.0660 REMARK 3 L13: -0.0356 L23: -0.5257 REMARK 3 S TENSOR REMARK 3 S11: 0.1812 S12: -0.2710 S13: 0.5801 REMARK 3 S21: 0.0067 S22: -0.0952 S23: -0.0654 REMARK 3 S31: -0.5145 S32: 0.2323 S33: 0.0617 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 381 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4562 0.6661 70.0573 REMARK 3 T TENSOR REMARK 3 T11: 0.7385 T22: 0.5982 REMARK 3 T33: 0.6362 T12: 0.0006 REMARK 3 T13: 0.0371 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 0.5920 L22: 0.2846 REMARK 3 L33: 0.7867 L12: -0.1000 REMARK 3 L13: -0.2029 L23: -0.2854 REMARK 3 S TENSOR REMARK 3 S11: 0.2256 S12: -0.0962 S13: 0.3988 REMARK 3 S21: -0.1773 S22: -0.0883 S23: 0.1967 REMARK 3 S31: -0.6417 S32: 0.1007 S33: 0.0242 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 461 THROUGH 516 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8888 -41.6146 82.3394 REMARK 3 T TENSOR REMARK 3 T11: 0.2791 T22: 0.3447 REMARK 3 T33: 0.3668 T12: -0.0003 REMARK 3 T13: -0.0015 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.8238 L22: 0.6834 REMARK 3 L33: 0.9322 L12: 0.0293 REMARK 3 L13: 0.4300 L23: -0.3675 REMARK 3 S TENSOR REMARK 3 S11: 0.0557 S12: -0.2002 S13: 0.0595 REMARK 3 S21: -0.0999 S22: 0.0284 S23: 0.0846 REMARK 3 S31: 0.0298 S32: 0.0898 S33: -0.0416 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 517 THROUGH 755 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8811 -34.3773 91.2284 REMARK 3 T TENSOR REMARK 3 T11: 0.2234 T22: 0.3388 REMARK 3 T33: 0.3707 T12: -0.0083 REMARK 3 T13: 0.0160 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.8067 L22: 0.9802 REMARK 3 L33: 0.9628 L12: -0.2640 REMARK 3 L13: 0.2162 L23: 0.2010 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: 0.0110 S13: 0.0788 REMARK 3 S21: 0.0155 S22: 0.0111 S23: -0.2546 REMARK 3 S31: 0.0181 S32: 0.1461 S33: 0.0432 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 756 THROUGH 835 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2810 -25.1703 95.8614 REMARK 3 T TENSOR REMARK 3 T11: 0.2890 T22: 0.3517 REMARK 3 T33: 0.4146 T12: 0.0096 REMARK 3 T13: -0.0073 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.6715 L22: 0.4126 REMARK 3 L33: 1.3137 L12: -0.1715 REMARK 3 L13: 0.3182 L23: 0.0731 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: 0.0161 S13: 0.1880 REMARK 3 S21: 0.1044 S22: -0.0075 S23: -0.1810 REMARK 3 S31: -0.0373 S32: -0.1376 S33: 0.0126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EDU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(220) SIDE REMARK 200 BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40864 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.790 REMARK 200 RESOLUTION RANGE LOW (A) : 149.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.20400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 1.85300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CBT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM SODIUM TARTRATE, 20% REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.63100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.16650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.51600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.16650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.63100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 74.51600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 91 REMARK 465 GLY B 92 REMARK 465 SER B 93 REMARK 465 SER B 94 REMARK 465 HIS B 95 REMARK 465 HIS B 96 REMARK 465 HIS B 97 REMARK 465 HIS B 98 REMARK 465 HIS B 99 REMARK 465 HIS B 100 REMARK 465 GLU B 101 REMARK 465 ASN B 102 REMARK 465 LEU B 103 REMARK 465 TYR B 104 REMARK 465 PHE B 105 REMARK 465 GLN B 106 REMARK 465 GLY B 107 REMARK 465 SER B 108 REMARK 465 LYS B 109 REMARK 465 ILE B 110 REMARK 465 LEU B 808 REMARK 465 PRO B 809 REMARK 465 MET A 91 REMARK 465 GLY A 92 REMARK 465 SER A 93 REMARK 465 SER A 94 REMARK 465 HIS A 95 REMARK 465 HIS A 96 REMARK 465 HIS A 97 REMARK 465 HIS A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 465 GLU A 101 REMARK 465 ASN A 102 REMARK 465 LEU A 103 REMARK 465 TYR A 104 REMARK 465 PHE A 105 REMARK 465 GLN A 106 REMARK 465 GLY A 107 REMARK 465 SER A 108 REMARK 465 LYS A 109 REMARK 465 ILE A 110 REMARK 465 GLU A 111 REMARK 465 GLU A 112 REMARK 465 GLY A 113 REMARK 465 ASP A 138 REMARK 465 THR A 139 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 ARG B 810 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 LYS A 347 CG CD CE NZ REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 LYS A 403 CG CD CE NZ REMARK 470 GLU A 418 CG CD OE1 OE2 REMARK 470 LYS A 421 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 280 O LYS B 283 2.12 REMARK 500 OH TYR A 782 O2 TSN A 904 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 379 C - N - CD ANGL. DEV. = 19.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 114 -164.25 -128.25 REMARK 500 LEU B 115 98.32 -166.24 REMARK 500 THR B 161 31.90 -92.46 REMARK 500 ILE B 216 -56.64 -122.41 REMARK 500 ALA B 276 -89.12 -84.72 REMARK 500 ASN B 281 -128.58 60.36 REMARK 500 LYS B 310 19.54 59.66 REMARK 500 ASP B 317 -165.94 -122.75 REMARK 500 TYR B 391 -32.35 -139.49 REMARK 500 PRO B 442 3.59 -68.20 REMARK 500 PHE B 622 -55.63 -128.48 REMARK 500 ASN B 624 92.92 -68.34 REMARK 500 PRO B 681 31.14 -85.45 REMARK 500 MET B 682 -2.83 73.28 REMARK 500 ALA B 694 -134.74 56.49 REMARK 500 PRO B 708 -159.13 -86.22 REMARK 500 LEU B 722 -63.86 -137.04 REMARK 500 ASN B 731 73.08 53.59 REMARK 500 SER B 738 85.11 -69.73 REMARK 500 GLU B 779 -101.54 -121.57 REMARK 500 LEU B 806 -169.22 -124.20 REMARK 500 GLU A 136 14.22 104.59 REMARK 500 LYS A 191 42.28 -72.67 REMARK 500 ALA A 192 -46.93 -136.93 REMARK 500 ILE A 216 -75.04 -92.90 REMARK 500 LYS A 252 -170.35 58.75 REMARK 500 ALA A 276 -78.47 -83.69 REMARK 500 ASN A 293 -176.95 -69.60 REMARK 500 ASP A 317 -156.67 -99.24 REMARK 500 ASN A 375 -158.83 -70.69 REMARK 500 SER A 378 -153.81 70.77 REMARK 500 ASP A 404 -64.46 -94.26 REMARK 500 ALA A 409 97.77 -65.08 REMARK 500 HIS A 492 107.49 -55.55 REMARK 500 SER A 568 71.16 55.17 REMARK 500 PHE A 622 -49.75 -132.39 REMARK 500 ALA A 694 -129.24 51.68 REMARK 500 ASN A 706 66.39 -112.34 REMARK 500 PRO A 708 -156.39 -86.97 REMARK 500 ARG A 709 48.09 39.88 REMARK 500 LEU A 722 -64.19 -137.91 REMARK 500 ASN A 731 70.34 53.21 REMARK 500 GLU A 779 -110.85 -128.68 REMARK 500 LEU A 808 79.03 -119.54 REMARK 500 SER A 833 -3.97 -143.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 378 PRO A 379 -31.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B2504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 647 O REMARK 620 2 ASP B 647 OD1 70.4 REMARK 620 3 ASP B 649 O 93.9 97.3 REMARK 620 4 HIS B 651 O 156.7 88.7 78.3 REMARK 620 5 SER B 670 OG 85.1 109.3 151.2 112.3 REMARK 620 6 LEU B 671 O 77.5 138.2 58.3 115.0 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 649 OD1 REMARK 620 2 HIS B 651 ND1 97.4 REMARK 620 3 ASP B 742 OD2 90.8 81.2 REMARK 620 4 TSN B2501 O1 95.5 118.7 158.0 REMARK 620 5 TSN B2501 O2 170.4 90.4 95.8 75.8 REMARK 620 6 TSN B2501 N1 120.1 93.0 149.1 32.1 53.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B2503 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 660 O REMARK 620 2 ASP B 663 O 73.6 REMARK 620 3 VAL B 666 O 106.2 68.9 REMARK 620 4 PHE B 699 O 153.1 133.2 89.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 902 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 647 O REMARK 620 2 ASP A 647 OD1 73.7 REMARK 620 3 ASP A 649 O 95.3 97.4 REMARK 620 4 HIS A 651 O 157.9 85.9 78.5 REMARK 620 5 SER A 670 OG 83.9 107.6 153.5 111.0 REMARK 620 6 LEU A 671 O 73.8 137.4 59.2 118.8 95.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 649 OD1 REMARK 620 2 HIS A 651 ND1 102.4 REMARK 620 3 ASP A 742 OD2 89.9 108.0 REMARK 620 4 TSN A 904 O2 158.4 94.6 97.6 REMARK 620 5 TSN A 904 O1 96.5 97.2 152.0 67.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 903 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 660 O REMARK 620 2 ASP A 663 O 74.0 REMARK 620 3 VAL A 666 O 107.9 69.8 REMARK 620 4 PHE A 699 O 158.1 124.5 90.9 REMARK 620 5 HOH A1003 O 84.7 98.3 158.4 81.0 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EEF RELATED DB: PDB REMARK 900 RELATED ID: 5EEI RELATED DB: PDB REMARK 900 RELATED ID: 5EEK RELATED DB: PDB REMARK 900 RELATED ID: 5EEM RELATED DB: PDB REMARK 900 RELATED ID: 5EEN RELATED DB: PDB REMARK 900 RELATED ID: 5EF7 RELATED DB: PDB REMARK 900 RELATED ID: 5EF8 RELATED DB: PDB REMARK 900 RELATED ID: 5EFB RELATED DB: PDB REMARK 900 RELATED ID: 5EFG RELATED DB: PDB REMARK 900 RELATED ID: 5EFH RELATED DB: PDB REMARK 900 RELATED ID: 5EFJ RELATED DB: PDB REMARK 900 RELATED ID: 5EFK RELATED DB: PDB REMARK 900 RELATED ID: 5EFN RELATED DB: PDB DBREF 5EDU B 109 474 UNP P0AEY0 MALE_ECO57 27 392 DBREF 5EDU B 479 835 UNP Q9UBN7 HDAC6_HUMAN 479 835 DBREF 5EDU A 109 474 UNP P0AEY0 MALE_ECO57 27 392 DBREF 5EDU A 479 835 UNP Q9UBN7 HDAC6_HUMAN 479 835 SEQADV 5EDU MET B 91 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLY B 92 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER B 93 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER B 94 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 95 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 96 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 97 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 98 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 99 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS B 100 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLU B 101 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU ASN B 102 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU LEU B 103 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU TYR B 104 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU PHE B 105 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLN B 106 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLY B 107 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER B 108 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU ALA B 467 UNP P0AEY0 GLU 385 CONFLICT SEQADV 5EDU ALA B 470 UNP P0AEY0 LYS 388 CONFLICT SEQADV 5EDU ALA B 471 UNP P0AEY0 ASP 389 CONFLICT SEQADV 5EDU ASN B 475 UNP P0AEY0 LINKER SEQADV 5EDU ALA B 476 UNP P0AEY0 LINKER SEQADV 5EDU ALA B 477 UNP P0AEY0 LINKER SEQADV 5EDU ALA B 478 UNP P0AEY0 LINKER SEQADV 5EDU MET A 91 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLY A 92 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER A 93 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER A 94 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 95 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 96 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 97 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 98 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 99 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU HIS A 100 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLU A 101 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU ASN A 102 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU LEU A 103 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU TYR A 104 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU PHE A 105 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLN A 106 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU GLY A 107 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU SER A 108 UNP P0AEY0 EXPRESSION TAG SEQADV 5EDU ALA A 467 UNP P0AEY0 GLU 385 CONFLICT SEQADV 5EDU ALA A 470 UNP P0AEY0 LYS 388 CONFLICT SEQADV 5EDU ALA A 471 UNP P0AEY0 ASP 389 CONFLICT SEQADV 5EDU ASN A 475 UNP P0AEY0 LINKER SEQADV 5EDU ALA A 476 UNP P0AEY0 LINKER SEQADV 5EDU ALA A 477 UNP P0AEY0 LINKER SEQADV 5EDU ALA A 478 UNP P0AEY0 LINKER SEQRES 1 B 745 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 B 745 TYR PHE GLN GLY SER LYS ILE GLU GLU GLY LYS LEU VAL SEQRES 3 B 745 ILE TRP ILE ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA SEQRES 4 B 745 GLU VAL GLY LYS LYS PHE GLU LYS ASP THR GLY ILE LYS SEQRES 5 B 745 VAL THR VAL GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE SEQRES 6 B 745 PRO GLN VAL ALA ALA THR GLY ASP GLY PRO ASP ILE ILE SEQRES 7 B 745 PHE TRP ALA HIS ASP ARG PHE GLY GLY TYR ALA GLN SER SEQRES 8 B 745 GLY LEU LEU ALA GLU ILE THR PRO ASP LYS ALA PHE GLN SEQRES 9 B 745 ASP LYS LEU TYR PRO PHE THR TRP ASP ALA VAL ARG TYR SEQRES 10 B 745 ASN GLY LYS LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA SEQRES 11 B 745 LEU SER LEU ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO SEQRES 12 B 745 PRO LYS THR TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU SEQRES 13 B 745 LEU LYS ALA LYS GLY LYS SER ALA LEU MET PHE ASN LEU SEQRES 14 B 745 GLN GLU PRO TYR PHE THR TRP PRO LEU ILE ALA ALA ASP SEQRES 15 B 745 GLY GLY TYR ALA PHE LYS TYR GLU ASN GLY LYS TYR ASP SEQRES 16 B 745 ILE LYS ASP VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA SEQRES 17 B 745 GLY LEU THR PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS SEQRES 18 B 745 MET ASN ALA ASP THR ASP TYR SER ILE ALA GLU ALA ALA SEQRES 19 B 745 PHE ASN LYS GLY GLU THR ALA MET THR ILE ASN GLY PRO SEQRES 20 B 745 TRP ALA TRP SER ASN ILE ASP THR SER LYS VAL ASN TYR SEQRES 21 B 745 GLY VAL THR VAL LEU PRO THR PHE LYS GLY GLN PRO SER SEQRES 22 B 745 LYS PRO PHE VAL GLY VAL LEU SER ALA GLY ILE ASN ALA SEQRES 23 B 745 ALA SER PRO ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU SEQRES 24 B 745 ASN TYR LEU LEU THR ASP GLU GLY LEU GLU ALA VAL ASN SEQRES 25 B 745 LYS ASP LYS PRO LEU GLY ALA VAL ALA LEU LYS SER TYR SEQRES 26 B 745 GLU GLU GLU LEU ALA LYS ASP PRO ARG ILE ALA ALA THR SEQRES 27 B 745 MET GLU ASN ALA GLN LYS GLY GLU ILE MET PRO ASN ILE SEQRES 28 B 745 PRO GLN MET SER ALA PHE TRP TYR ALA VAL ARG THR ALA SEQRES 29 B 745 VAL ILE ASN ALA ALA SER GLY ARG GLN THR VAL ASP ALA SEQRES 30 B 745 ALA LEU ALA ALA ALA GLN THR ASN ALA ALA ALA SER ARG SEQRES 31 B 745 THR GLY LEU VAL TYR ASP GLN ASN MET MET ASN HIS CYS SEQRES 32 B 745 ASN LEU TRP ASP SER HIS HIS PRO GLU VAL PRO GLN ARG SEQRES 33 B 745 ILE LEU ARG ILE MET CYS ARG LEU GLU GLU LEU GLY LEU SEQRES 34 B 745 ALA GLY ARG CYS LEU THR LEU THR PRO ARG PRO ALA THR SEQRES 35 B 745 GLU ALA GLU LEU LEU THR CYS HIS SER ALA GLU TYR VAL SEQRES 36 B 745 GLY HIS LEU ARG ALA THR GLU LYS MET LYS THR ARG GLU SEQRES 37 B 745 LEU HIS ARG GLU SER SER ASN PHE ASP SER ILE TYR ILE SEQRES 38 B 745 CYS PRO SER THR PHE ALA CYS ALA GLN LEU ALA THR GLY SEQRES 39 B 745 ALA ALA CYS ARG LEU VAL GLU ALA VAL LEU SER GLY GLU SEQRES 40 B 745 VAL LEU ASN GLY ALA ALA VAL VAL ARG PRO PRO GLY HIS SEQRES 41 B 745 HIS ALA GLU GLN ASP ALA ALA CYS GLY PHE CYS PHE PHE SEQRES 42 B 745 ASN SER VAL ALA VAL ALA ALA ARG HIS ALA GLN THR ILE SEQRES 43 B 745 SER GLY HIS ALA LEU ARG ILE LEU ILE VAL ASP TRP ASP SEQRES 44 B 745 VAL HIS HIS GLY ASN GLY THR GLN HIS MET PHE GLU ASP SEQRES 45 B 745 ASP PRO SER VAL LEU TYR VAL SER LEU HIS ARG TYR ASP SEQRES 46 B 745 HIS GLY THR PHE PHE PRO MET GLY ASP GLU GLY ALA SER SEQRES 47 B 745 SER GLN ILE GLY ARG ALA ALA GLY THR GLY PHE THR VAL SEQRES 48 B 745 ASN VAL ALA TRP ASN GLY PRO ARG MET GLY ASP ALA ASP SEQRES 49 B 745 TYR LEU ALA ALA TRP HIS ARG LEU VAL LEU PRO ILE ALA SEQRES 50 B 745 TYR GLU PHE ASN PRO GLU LEU VAL LEU VAL SER ALA GLY SEQRES 51 B 745 PHE ASP ALA ALA ARG GLY ASP PRO LEU GLY GLY CYS GLN SEQRES 52 B 745 VAL SER PRO GLU GLY TYR ALA HIS LEU THR HIS LEU LEU SEQRES 53 B 745 MET GLY LEU ALA SER GLY ARG ILE ILE LEU ILE LEU GLU SEQRES 54 B 745 GLY GLY TYR ASN LEU THR SER ILE SER GLU SER MET ALA SEQRES 55 B 745 ALA CYS THR ARG SER LEU LEU GLY ASP PRO PRO PRO LEU SEQRES 56 B 745 LEU THR LEU PRO ARG PRO PRO LEU SER GLY ALA LEU ALA SEQRES 57 B 745 SER ILE THR GLU THR ILE GLN VAL HIS ARG ARG TYR TRP SEQRES 58 B 745 ARG SER LEU ARG SEQRES 1 A 745 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 A 745 TYR PHE GLN GLY SER LYS ILE GLU GLU GLY LYS LEU VAL SEQRES 3 A 745 ILE TRP ILE ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA SEQRES 4 A 745 GLU VAL GLY LYS LYS PHE GLU LYS ASP THR GLY ILE LYS SEQRES 5 A 745 VAL THR VAL GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE SEQRES 6 A 745 PRO GLN VAL ALA ALA THR GLY ASP GLY PRO ASP ILE ILE SEQRES 7 A 745 PHE TRP ALA HIS ASP ARG PHE GLY GLY TYR ALA GLN SER SEQRES 8 A 745 GLY LEU LEU ALA GLU ILE THR PRO ASP LYS ALA PHE GLN SEQRES 9 A 745 ASP LYS LEU TYR PRO PHE THR TRP ASP ALA VAL ARG TYR SEQRES 10 A 745 ASN GLY LYS LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA SEQRES 11 A 745 LEU SER LEU ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO SEQRES 12 A 745 PRO LYS THR TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU SEQRES 13 A 745 LEU LYS ALA LYS GLY LYS SER ALA LEU MET PHE ASN LEU SEQRES 14 A 745 GLN GLU PRO TYR PHE THR TRP PRO LEU ILE ALA ALA ASP SEQRES 15 A 745 GLY GLY TYR ALA PHE LYS TYR GLU ASN GLY LYS TYR ASP SEQRES 16 A 745 ILE LYS ASP VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA SEQRES 17 A 745 GLY LEU THR PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS SEQRES 18 A 745 MET ASN ALA ASP THR ASP TYR SER ILE ALA GLU ALA ALA SEQRES 19 A 745 PHE ASN LYS GLY GLU THR ALA MET THR ILE ASN GLY PRO SEQRES 20 A 745 TRP ALA TRP SER ASN ILE ASP THR SER LYS VAL ASN TYR SEQRES 21 A 745 GLY VAL THR VAL LEU PRO THR PHE LYS GLY GLN PRO SER SEQRES 22 A 745 LYS PRO PHE VAL GLY VAL LEU SER ALA GLY ILE ASN ALA SEQRES 23 A 745 ALA SER PRO ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU SEQRES 24 A 745 ASN TYR LEU LEU THR ASP GLU GLY LEU GLU ALA VAL ASN SEQRES 25 A 745 LYS ASP LYS PRO LEU GLY ALA VAL ALA LEU LYS SER TYR SEQRES 26 A 745 GLU GLU GLU LEU ALA LYS ASP PRO ARG ILE ALA ALA THR SEQRES 27 A 745 MET GLU ASN ALA GLN LYS GLY GLU ILE MET PRO ASN ILE SEQRES 28 A 745 PRO GLN MET SER ALA PHE TRP TYR ALA VAL ARG THR ALA SEQRES 29 A 745 VAL ILE ASN ALA ALA SER GLY ARG GLN THR VAL ASP ALA SEQRES 30 A 745 ALA LEU ALA ALA ALA GLN THR ASN ALA ALA ALA SER ARG SEQRES 31 A 745 THR GLY LEU VAL TYR ASP GLN ASN MET MET ASN HIS CYS SEQRES 32 A 745 ASN LEU TRP ASP SER HIS HIS PRO GLU VAL PRO GLN ARG SEQRES 33 A 745 ILE LEU ARG ILE MET CYS ARG LEU GLU GLU LEU GLY LEU SEQRES 34 A 745 ALA GLY ARG CYS LEU THR LEU THR PRO ARG PRO ALA THR SEQRES 35 A 745 GLU ALA GLU LEU LEU THR CYS HIS SER ALA GLU TYR VAL SEQRES 36 A 745 GLY HIS LEU ARG ALA THR GLU LYS MET LYS THR ARG GLU SEQRES 37 A 745 LEU HIS ARG GLU SER SER ASN PHE ASP SER ILE TYR ILE SEQRES 38 A 745 CYS PRO SER THR PHE ALA CYS ALA GLN LEU ALA THR GLY SEQRES 39 A 745 ALA ALA CYS ARG LEU VAL GLU ALA VAL LEU SER GLY GLU SEQRES 40 A 745 VAL LEU ASN GLY ALA ALA VAL VAL ARG PRO PRO GLY HIS SEQRES 41 A 745 HIS ALA GLU GLN ASP ALA ALA CYS GLY PHE CYS PHE PHE SEQRES 42 A 745 ASN SER VAL ALA VAL ALA ALA ARG HIS ALA GLN THR ILE SEQRES 43 A 745 SER GLY HIS ALA LEU ARG ILE LEU ILE VAL ASP TRP ASP SEQRES 44 A 745 VAL HIS HIS GLY ASN GLY THR GLN HIS MET PHE GLU ASP SEQRES 45 A 745 ASP PRO SER VAL LEU TYR VAL SER LEU HIS ARG TYR ASP SEQRES 46 A 745 HIS GLY THR PHE PHE PRO MET GLY ASP GLU GLY ALA SER SEQRES 47 A 745 SER GLN ILE GLY ARG ALA ALA GLY THR GLY PHE THR VAL SEQRES 48 A 745 ASN VAL ALA TRP ASN GLY PRO ARG MET GLY ASP ALA ASP SEQRES 49 A 745 TYR LEU ALA ALA TRP HIS ARG LEU VAL LEU PRO ILE ALA SEQRES 50 A 745 TYR GLU PHE ASN PRO GLU LEU VAL LEU VAL SER ALA GLY SEQRES 51 A 745 PHE ASP ALA ALA ARG GLY ASP PRO LEU GLY GLY CYS GLN SEQRES 52 A 745 VAL SER PRO GLU GLY TYR ALA HIS LEU THR HIS LEU LEU SEQRES 53 A 745 MET GLY LEU ALA SER GLY ARG ILE ILE LEU ILE LEU GLU SEQRES 54 A 745 GLY GLY TYR ASN LEU THR SER ILE SER GLU SER MET ALA SEQRES 55 A 745 ALA CYS THR ARG SER LEU LEU GLY ASP PRO PRO PRO LEU SEQRES 56 A 745 LEU THR LEU PRO ARG PRO PRO LEU SER GLY ALA LEU ALA SEQRES 57 A 745 SER ILE THR GLU THR ILE GLN VAL HIS ARG ARG TYR TRP SEQRES 58 A 745 ARG SER LEU ARG HET GLC C 1 12 HET GLC C 2 11 HET GLC D 1 12 HET GLC D 2 11 HET TSN B2501 22 HET ZN B2502 1 HET K B2503 1 HET K B2504 1 HET ZN A 901 1 HET K A 902 1 HET K A 903 1 HET TSN A 904 22 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM TSN TRICHOSTATIN A HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN TSN 7-[4-(DIMETHYLAMINO)PHENYL]-N-HYDROXY-4,6-DIMETHYL-7- HETSYN 2 TSN OXO-2,4-HEPTADIENAMIDE FORMUL 3 GLC 4(C6 H12 O6) FORMUL 5 TSN 2(C17 H22 N2 O3) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 K 4(K 1+) FORMUL 13 HOH *58(H2 O) HELIX 1 AA1 GLY B 124 GLY B 140 1 17 HELIX 2 AA2 LYS B 150 THR B 161 1 12 HELIX 3 AA3 ARG B 174 SER B 181 1 8 HELIX 4 AA4 ASP B 190 ASP B 195 1 6 HELIX 5 AA5 TYR B 198 VAL B 205 1 8 HELIX 6 AA6 THR B 236 GLU B 238 5 3 HELIX 7 AA7 GLU B 239 ALA B 249 1 11 HELIX 8 AA8 THR B 265 ALA B 270 1 6 HELIX 9 AA9 ASN B 293 ASN B 309 1 17 HELIX 10 AB1 ASP B 317 LYS B 327 1 11 HELIX 11 AB2 GLY B 336 TRP B 338 5 3 HELIX 12 AB3 ALA B 339 SER B 346 1 8 HELIX 13 AB4 ASN B 380 TYR B 391 1 12 HELIX 14 AB5 THR B 394 LYS B 405 1 12 HELIX 15 AB6 LEU B 412 ALA B 420 1 9 HELIX 16 AB7 ASP B 422 GLY B 435 1 14 HELIX 17 AB8 GLN B 443 ALA B 459 1 17 HELIX 18 AB9 THR B 464 THR B 474 1 11 HELIX 19 AC1 ASP B 486 ASN B 491 5 6 HELIX 20 AC2 PRO B 504 LEU B 517 1 14 HELIX 21 AC3 THR B 532 LEU B 537 1 6 HELIX 22 AC4 SER B 541 THR B 551 1 11 HELIX 23 AC5 GLU B 552 MET B 554 5 3 HELIX 24 AC6 LYS B 555 SER B 564 1 10 HELIX 25 AC7 SER B 574 LEU B 594 1 21 HELIX 26 AC8 ASN B 624 GLY B 638 1 15 HELIX 27 AC9 GLY B 653 PHE B 660 1 8 HELIX 28 AD1 ARG B 693 THR B 697 5 5 HELIX 29 AD2 GLY B 711 LEU B 722 1 12 HELIX 30 AD3 LEU B 722 ASN B 731 1 10 HELIX 31 AD4 SER B 755 MET B 767 1 13 HELIX 32 AD5 GLY B 768 GLY B 772 5 5 HELIX 33 AD6 ASN B 783 LEU B 799 1 17 HELIX 34 AD7 LEU B 813 ARG B 828 1 16 HELIX 35 AD8 GLY A 124 GLY A 132 1 9 HELIX 36 AD9 LYS A 150 ALA A 160 1 11 HELIX 37 AE1 ARG A 174 GLY A 182 1 9 HELIX 38 AE2 TYR A 198 ASP A 203 1 6 HELIX 39 AE3 THR A 236 GLU A 238 5 3 HELIX 40 AE4 GLU A 239 LYS A 248 1 10 HELIX 41 AE5 ALA A 249 GLY A 251 5 3 HELIX 42 AE6 THR A 265 ALA A 270 1 6 HELIX 43 AE7 ASN A 293 ASN A 309 1 17 HELIX 44 AE8 ASP A 317 LYS A 327 1 11 HELIX 45 AE9 GLY A 336 TRP A 338 5 3 HELIX 46 AF1 ALA A 339 THR A 345 1 7 HELIX 47 AF2 ASN A 380 LEU A 392 1 13 HELIX 48 AF3 THR A 394 LYS A 403 1 10 HELIX 49 AF4 LEU A 412 GLU A 417 1 6 HELIX 50 AF5 ASP A 422 LYS A 434 1 13 HELIX 51 AF6 GLN A 443 SER A 460 1 18 HELIX 52 AF7 THR A 464 ALA A 477 1 14 HELIX 53 AF8 ASP A 486 ASN A 491 5 6 HELIX 54 AF9 PRO A 504 LEU A 517 1 14 HELIX 55 AG1 GLY A 518 CYS A 523 1 6 HELIX 56 AG2 THR A 532 LEU A 537 1 6 HELIX 57 AG3 SER A 541 ALA A 550 1 10 HELIX 58 AG4 THR A 551 MET A 554 5 4 HELIX 59 AG5 LYS A 555 SER A 564 1 10 HELIX 60 AG6 SER A 574 SER A 595 1 22 HELIX 61 AG7 ASN A 624 ILE A 636 1 13 HELIX 62 AG8 GLY A 653 PHE A 660 1 8 HELIX 63 AG9 ASP A 675 THR A 678 5 4 HELIX 64 AH1 ARG A 693 THR A 697 5 5 HELIX 65 AH2 GLY A 711 LEU A 722 1 12 HELIX 66 AH3 LEU A 722 ASN A 731 1 10 HELIX 67 AH4 SER A 755 MET A 767 1 13 HELIX 68 AH5 GLY A 768 GLY A 772 5 5 HELIX 69 AH6 ASN A 783 LEU A 799 1 17 HELIX 70 AH7 LEU A 813 HIS A 827 1 15 SHEET 1 AA1 6 VAL B 143 GLU B 146 0 SHEET 2 AA1 6 LEU B 115 TRP B 118 1 N ILE B 117 O THR B 144 SHEET 3 AA1 6 ILE B 167 ALA B 171 1 O ILE B 167 N TRP B 118 SHEET 4 AA1 6 PHE B 366 ILE B 374 -1 O SER B 371 N TRP B 170 SHEET 5 AA1 6 TYR B 214 GLU B 219 -1 N TYR B 214 O ALA B 372 SHEET 6 AA1 6 ALA B 409 VAL B 410 -1 O ALA B 409 N VAL B 218 SHEET 1 AA2 5 VAL B 143 GLU B 146 0 SHEET 2 AA2 5 LEU B 115 TRP B 118 1 N ILE B 117 O THR B 144 SHEET 3 AA2 5 ILE B 167 ALA B 171 1 O ILE B 167 N TRP B 118 SHEET 4 AA2 5 PHE B 366 ILE B 374 -1 O SER B 371 N TRP B 170 SHEET 5 AA2 5 GLU B 436 ILE B 437 1 O GLU B 436 N VAL B 367 SHEET 1 AA3 2 ARG B 206 TYR B 207 0 SHEET 2 AA3 2 LYS B 210 LEU B 211 -1 O LYS B 210 N TYR B 207 SHEET 1 AA4 4 SER B 253 LEU B 255 0 SHEET 2 AA4 4 THR B 330 ASN B 335 1 O MET B 332 N ALA B 254 SHEET 3 AA4 4 SER B 222 ASN B 226 -1 N ASN B 226 O ALA B 331 SHEET 4 AA4 4 TYR B 350 THR B 353 -1 O GLY B 351 N TYR B 225 SHEET 1 AA5 2 TYR B 275 GLU B 280 0 SHEET 2 AA5 2 LYS B 283 GLY B 290 -1 O GLY B 290 N TYR B 275 SHEET 1 AA6 8 LEU B 524 LEU B 526 0 SHEET 2 AA6 8 THR B 481 VAL B 484 1 N LEU B 483 O LEU B 526 SHEET 3 AA6 8 ASN B 600 ALA B 603 1 O ASN B 600 N GLY B 482 SHEET 4 AA6 8 ILE B 774 LEU B 778 1 O LEU B 776 N ALA B 603 SHEET 5 AA6 8 LEU B 734 ALA B 739 1 N VAL B 737 O ILE B 775 SHEET 6 AA6 8 ILE B 643 ASP B 647 1 N LEU B 644 O LEU B 736 SHEET 7 AA6 8 VAL B 666 ARG B 673 1 O VAL B 669 N ILE B 645 SHEET 8 AA6 8 THR B 700 TRP B 705 1 O TRP B 705 N HIS B 672 SHEET 1 AA7 6 VAL A 143 GLU A 146 0 SHEET 2 AA7 6 LEU A 115 TRP A 118 1 N ILE A 117 O GLU A 146 SHEET 3 AA7 6 ILE A 167 ALA A 171 1 O PHE A 169 N TRP A 118 SHEET 4 AA7 6 GLY A 368 ILE A 374 -1 O GLY A 373 N ILE A 168 SHEET 5 AA7 6 TYR A 214 GLU A 219 -1 N ILE A 216 O LEU A 370 SHEET 6 AA7 6 ALA A 409 VAL A 410 -1 O ALA A 409 N VAL A 218 SHEET 1 AA8 2 ARG A 206 TYR A 207 0 SHEET 2 AA8 2 LYS A 210 LEU A 211 -1 O LYS A 210 N TYR A 207 SHEET 1 AA9 4 SER A 253 LEU A 255 0 SHEET 2 AA9 4 THR A 330 ASN A 335 1 O ALA A 331 N SER A 253 SHEET 3 AA9 4 SER A 222 ASN A 226 -1 N ILE A 224 O THR A 333 SHEET 4 AA9 4 TYR A 350 THR A 353 -1 O THR A 353 N LEU A 223 SHEET 1 AB1 2 TYR A 275 GLU A 280 0 SHEET 2 AB1 2 LYS A 283 GLY A 290 -1 O ASP A 285 N LYS A 278 SHEET 1 AB2 8 LEU A 524 LEU A 526 0 SHEET 2 AB2 8 THR A 481 VAL A 484 1 N THR A 481 O LEU A 524 SHEET 3 AB2 8 ASN A 600 ALA A 603 1 O ASN A 600 N GLY A 482 SHEET 4 AB2 8 ILE A 774 LEU A 778 1 O LEU A 776 N ALA A 603 SHEET 5 AB2 8 LEU A 734 ALA A 739 1 N VAL A 737 O ILE A 777 SHEET 6 AB2 8 ILE A 643 ASP A 647 1 N LEU A 644 O LEU A 736 SHEET 7 AB2 8 VAL A 666 ARG A 673 1 O VAL A 669 N ASP A 647 SHEET 8 AB2 8 THR A 700 TRP A 705 1 O VAL A 701 N TYR A 668 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.41 LINK O4 GLC D 1 C1 GLC D 2 1555 1555 1.41 LINK O ASP B 647 K K B2504 1555 1555 2.77 LINK OD1 ASP B 647 K K B2504 1555 1555 2.80 LINK OD1 ASP B 649 ZN ZN B2502 1555 1555 2.16 LINK O ASP B 649 K K B2504 1555 1555 2.79 LINK ND1 HIS B 651 ZN ZN B2502 1555 1555 2.20 LINK O HIS B 651 K K B2504 1555 1555 2.79 LINK O PHE B 660 K K B2503 1555 1555 2.79 LINK O ASP B 663 K K B2503 1555 1555 3.16 LINK O VAL B 666 K K B2503 1555 1555 2.87 LINK OG SER B 670 K K B2504 1555 1555 2.78 LINK O LEU B 671 K K B2504 1555 1555 3.01 LINK O PHE B 699 K K B2503 1555 1555 2.77 LINK OD2 ASP B 742 ZN ZN B2502 1555 1555 2.06 LINK O1 TSN B2501 ZN ZN B2502 1555 1555 2.02 LINK O2 TSN B2501 ZN ZN B2502 1555 1555 2.30 LINK N1 TSN B2501 ZN ZN B2502 1555 1555 2.60 LINK O ASP A 647 K K A 902 1555 1555 2.83 LINK OD1 ASP A 647 K K A 902 1555 1555 2.79 LINK OD1 ASP A 649 ZN ZN A 901 1555 1555 2.18 LINK O ASP A 649 K K A 902 1555 1555 2.79 LINK ND1 HIS A 651 ZN ZN A 901 1555 1555 2.11 LINK O HIS A 651 K K A 902 1555 1555 2.85 LINK O PHE A 660 K K A 903 1555 1555 2.69 LINK O ASP A 663 K K A 903 1555 1555 3.07 LINK O VAL A 666 K K A 903 1555 1555 2.78 LINK OG SER A 670 K K A 902 1555 1555 2.79 LINK O LEU A 671 K K A 902 1555 1555 2.94 LINK O PHE A 699 K K A 903 1555 1555 2.75 LINK OD2 ASP A 742 ZN ZN A 901 1555 1555 2.06 LINK ZN ZN A 901 O2 TSN A 904 1555 1555 2.59 LINK ZN ZN A 901 O1 TSN A 904 1555 1555 2.17 LINK K K A 903 O HOH A1003 1555 1555 3.05 CISPEP 1 ARG B 606 PRO B 607 0 3.20 CISPEP 2 PHE B 680 PRO B 681 0 5.36 CISPEP 3 ARG A 606 PRO A 607 0 1.86 CISPEP 4 PHE A 680 PRO A 681 0 3.27 CRYST1 49.262 149.032 216.333 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006710 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004623 0.00000