HEADER TRANSFERASE/TRANSCRIPTION FACTOR 26-OCT-15 5EG2 TITLE SET7/9 N265A IN COMPLEX WITH ADOHCY AND TAF10 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SETD7; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HISTONE H3-K4 METHYLTRANSFERASE SETD7,H3-K4-HMTASE SETD7, COMPND 5 LYSINE N-METHYLTRANSFERASE 7,SET DOMAIN-CONTAINING PROTEIN 7,SET7/9; COMPND 6 EC: 2.1.1.43; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 186-195; COMPND 13 SYNONYM: STAF28,TRANSCRIPTION INITIATION FACTOR TFIID 30 KDA SUBUNIT, COMPND 14 TAFII30; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SETD7, KIAA1717, KMT7, SET7, SET9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2 BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIS2; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TRANSFERASE-TRANSCRIPTION FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.M.KRONER,R.J.FICK,R.C.TRIEVEL REVDAT 6 27-SEP-23 5EG2 1 REMARK REVDAT 5 27-NOV-19 5EG2 1 REMARK REVDAT 4 20-SEP-17 5EG2 1 REMARK REVDAT 3 30-MAR-16 5EG2 1 JRNL REVDAT 2 03-FEB-16 5EG2 1 JRNL REVDAT 1 13-JAN-16 5EG2 0 JRNL AUTH R.J.FICK,G.M.KRONER,B.NEPAL,R.MAGNANI,S.HOROWITZ,R.L.HOUTZ, JRNL AUTH 2 S.SCHEINER,R.C.TRIEVEL JRNL TITL SULFUR-OXYGEN CHALCOGEN BONDING MEDIATES ADOMET RECOGNITION JRNL TITL 2 IN THE LYSINE METHYLTRANSFERASE SET7/9. JRNL REF ACS CHEM.BIOL. V. 11 748 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 26713889 JRNL DOI 10.1021/ACSCHEMBIO.5B00852 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9-1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 56152 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9198 - 4.2030 1.00 2836 154 0.1548 0.1767 REMARK 3 2 4.2030 - 3.3366 1.00 2723 139 0.1328 0.1576 REMARK 3 3 3.3366 - 2.9149 1.00 2720 148 0.1591 0.1616 REMARK 3 4 2.9149 - 2.6485 1.00 2684 143 0.1686 0.1941 REMARK 3 5 2.6485 - 2.4587 1.00 2679 142 0.1565 0.1708 REMARK 3 6 2.4587 - 2.3137 1.00 2665 137 0.1479 0.1817 REMARK 3 7 2.3137 - 2.1979 1.00 2667 142 0.1402 0.1463 REMARK 3 8 2.1979 - 2.1022 1.00 2683 144 0.1396 0.1681 REMARK 3 9 2.1022 - 2.0213 1.00 2637 139 0.1387 0.1738 REMARK 3 10 2.0213 - 1.9515 1.00 2673 138 0.1442 0.1988 REMARK 3 11 1.9515 - 1.8905 1.00 2637 137 0.1341 0.1684 REMARK 3 12 1.8905 - 1.8365 1.00 2663 140 0.1316 0.1755 REMARK 3 13 1.8365 - 1.7881 1.00 2638 139 0.1339 0.1700 REMARK 3 14 1.7881 - 1.7445 1.00 2663 140 0.1301 0.1751 REMARK 3 15 1.7445 - 1.7048 1.00 2651 141 0.1308 0.1522 REMARK 3 16 1.7048 - 1.6686 1.00 2609 139 0.1409 0.1631 REMARK 3 17 1.6686 - 1.6352 1.00 2660 140 0.1429 0.1890 REMARK 3 18 1.6352 - 1.6043 1.00 2613 135 0.1440 0.1681 REMARK 3 19 1.6043 - 1.5757 1.00 2646 141 0.1499 0.1808 REMARK 3 20 1.5757 - 1.5490 0.99 2588 139 0.1567 0.2043 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2023 REMARK 3 ANGLE : 1.182 2765 REMARK 3 CHIRALITY : 0.052 302 REMARK 3 PLANARITY : 0.006 358 REMARK 3 DIHEDRAL : 12.808 728 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EG2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97903 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V706 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V706 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56195 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.90400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4J83 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 RATIO OF PROTEIN SOLUTION TO REMARK 280 CRYSTALLIZATION SOLUTION. PROTEIN SOLUTION: 4.0-8.0 MG/ML REMARK 280 PROTEIN, 2.5 MM ADOMET, 2.0 MM TAF10 PEPTIDE, AND 2.0 MM TCEP REMARK 280 CRYSTALLANT SOLUTION: 0.99 - 1.02 M SODIUM CITRATE, 12 - 22 MM REMARK 280 NICKEL (II) CHLORIDE, AND 100 MM IMIDAZOLE PH 8.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.90600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.95300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.95300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.90600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 105 REMARK 465 ALA A 106 REMARK 465 MET A 107 REMARK 465 GLY A 108 REMARK 465 SER A 109 REMARK 465 TYR A 110 REMARK 465 LYS A 111 REMARK 465 ASP A 112 REMARK 465 ASN A 113 REMARK 465 ILE A 114 REMARK 465 ARG A 115 REMARK 465 HIS A 116 REMARK 465 PRO A 342 REMARK 465 GLY A 343 REMARK 465 LYS A 344 REMARK 465 SER A 345 REMARK 465 GLY A 346 REMARK 465 GLN A 365 REMARK 465 LYS A 366 REMARK 465 LYS B 192 REMARK 465 TYR B 193 REMARK 465 THR B 194 REMARK 465 LEU B 195 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 271 CG CD OE1 OE2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 SER A 340 OG REMARK 470 LYS A 358 CG CD CE NZ REMARK 470 GLN A 364 CG CD OE1 NE2 REMARK 470 SER B 186 OG REMARK 470 LYS B 187 CG CD CE NZ REMARK 470 ARG B 191 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 717 O HOH A 776 2.12 REMARK 500 O HOH B 208 O HOH B 209 2.13 REMARK 500 O HOH A 536 O HOH A 760 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 639 O HOH A 639 4645 1.91 REMARK 500 O HOH A 511 O HOH A 659 5665 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 152 -43.75 -143.09 REMARK 500 ASP A 194 56.65 -151.73 REMARK 500 THR A 197 -168.08 -119.91 REMARK 500 SER A 202 146.08 -174.75 REMARK 500 CYS A 288 21.22 -142.83 REMARK 500 ILE A 316 -159.99 -139.19 REMARK 500 LYS B 187 44.76 -84.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 801 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 802 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH A 803 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A 804 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A 805 DISTANCE = 6.80 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 126 O REMARK 620 2 SER A 128 OG 113.7 REMARK 620 3 VAL A 147 O 101.8 81.1 REMARK 620 4 TYR A 148 O 94.9 135.9 59.9 REMARK 620 5 HOH A 607 O 125.0 78.2 133.1 112.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 DBREF 5EG2 A 110 366 UNP Q8WTS6 SETD7_HUMAN 110 366 DBREF 5EG2 B 186 195 UNP Q12962 TAF10_HUMAN 186 195 SEQADV 5EG2 GLY A 105 UNP Q8WTS6 EXPRESSION TAG SEQADV 5EG2 ALA A 106 UNP Q8WTS6 EXPRESSION TAG SEQADV 5EG2 MET A 107 UNP Q8WTS6 EXPRESSION TAG SEQADV 5EG2 GLY A 108 UNP Q8WTS6 EXPRESSION TAG SEQADV 5EG2 SER A 109 UNP Q8WTS6 EXPRESSION TAG SEQADV 5EG2 ALA A 265 UNP Q8WTS6 ASN 265 ENGINEERED MUTATION SEQRES 1 A 262 GLY ALA MET GLY SER TYR LYS ASP ASN ILE ARG HIS GLY SEQRES 2 A 262 VAL CYS TRP ILE TYR TYR PRO ASP GLY GLY SER LEU VAL SEQRES 3 A 262 GLY GLU VAL ASN GLU ASP GLY GLU MET THR GLY GLU LYS SEQRES 4 A 262 ILE ALA TYR VAL TYR PRO ASP GLU ARG THR ALA LEU TYR SEQRES 5 A 262 GLY LYS PHE ILE ASP GLY GLU MET ILE GLU GLY LYS LEU SEQRES 6 A 262 ALA THR LEU MET SER THR GLU GLU GLY ARG PRO HIS PHE SEQRES 7 A 262 GLU LEU MET PRO GLY ASN SER VAL TYR HIS PHE ASP LYS SEQRES 8 A 262 SER THR SER SER CYS ILE SER THR ASN ALA LEU LEU PRO SEQRES 9 A 262 ASP PRO TYR GLU SER GLU ARG VAL TYR VAL ALA GLU SER SEQRES 10 A 262 LEU ILE SER SER ALA GLY GLU GLY LEU PHE SER LYS VAL SEQRES 11 A 262 ALA VAL GLY PRO ASN THR VAL MET SER PHE TYR ASN GLY SEQRES 12 A 262 VAL ARG ILE THR HIS GLN GLU VAL ASP SER ARG ASP TRP SEQRES 13 A 262 ALA LEU ASN GLY ALA THR LEU SER LEU ASP GLU GLU THR SEQRES 14 A 262 VAL ILE ASP VAL PRO GLU PRO TYR ASN HIS VAL SER LYS SEQRES 15 A 262 TYR CYS ALA SER LEU GLY HIS LYS ALA ASN HIS SER PHE SEQRES 16 A 262 THR PRO ASN CYS ILE TYR ASP MET PHE VAL HIS PRO ARG SEQRES 17 A 262 PHE GLY PRO ILE LYS CYS ILE ARG THR LEU ARG ALA VAL SEQRES 18 A 262 GLU ALA ASP GLU GLU LEU THR VAL ALA TYR GLY TYR ASP SEQRES 19 A 262 HIS SER PRO PRO GLY LYS SER GLY PRO GLU ALA PRO GLU SEQRES 20 A 262 TRP TYR GLN VAL GLU LEU LYS ALA PHE GLN ALA THR GLN SEQRES 21 A 262 GLN LYS SEQRES 1 B 10 SER LYS SER MLZ ASP ARG LYS TYR THR LEU MODRES 5EG2 MLZ B 189 LYS MODIFIED RESIDUE HET MLZ B 189 10 HET SAH A 401 26 HET NA A 402 1 HETNAM MLZ N-METHYL-LYSINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM NA SODIUM ION FORMUL 2 MLZ C7 H16 N2 O2 FORMUL 3 SAH C14 H20 N6 O5 S FORMUL 4 NA NA 1+ FORMUL 5 HOH *316(H2 O) HELIX 1 AA1 ASP A 209 GLU A 214 1 6 HELIX 2 AA2 THR A 251 SER A 257 1 7 HELIX 3 AA3 ASP A 259 ASN A 263 5 5 HELIX 4 AA4 LEU A 291 ALA A 295 5 5 HELIX 5 AA5 PRO A 350 GLN A 364 1 15 SHEET 1 AA1 6 VAL A 118 TYR A 122 0 SHEET 2 AA1 6 SER A 128 GLU A 132 -1 O LEU A 129 N ILE A 121 SHEET 3 AA1 6 GLY A 141 VAL A 147 -1 O VAL A 147 N SER A 128 SHEET 4 AA1 6 THR A 153 ILE A 160 -1 O GLY A 157 N ILE A 144 SHEET 5 AA1 6 GLU A 163 GLU A 176 -1 O LYS A 168 N TYR A 156 SHEET 6 AA1 6 ARG A 179 LEU A 184 -1 O HIS A 181 N MET A 173 SHEET 1 AA2 6 VAL A 118 TYR A 122 0 SHEET 2 AA2 6 SER A 128 GLU A 132 -1 O LEU A 129 N ILE A 121 SHEET 3 AA2 6 GLY A 141 VAL A 147 -1 O VAL A 147 N SER A 128 SHEET 4 AA2 6 THR A 153 ILE A 160 -1 O GLY A 157 N ILE A 144 SHEET 5 AA2 6 GLU A 163 GLU A 176 -1 O LYS A 168 N TYR A 156 SHEET 6 AA2 6 VAL A 190 TYR A 191 -1 O TYR A 191 N GLY A 167 SHEET 1 AA3 4 VAL A 216 GLU A 220 0 SHEET 2 AA3 4 GLU A 228 SER A 232 -1 O GLY A 229 N ALA A 219 SHEET 3 AA3 4 GLU A 330 VAL A 333 -1 O LEU A 331 N LEU A 230 SHEET 4 AA3 4 ASN A 296 HIS A 297 1 N ASN A 296 O VAL A 333 SHEET 1 AA4 3 VAL A 241 TYR A 245 0 SHEET 2 AA4 3 GLY A 314 THR A 321 -1 O ILE A 319 N MET A 242 SHEET 3 AA4 3 CYS A 303 HIS A 310 -1 N ASP A 306 O CYS A 318 SHEET 1 AA5 3 VAL A 248 ILE A 250 0 SHEET 2 AA5 3 VAL A 274 ASP A 276 -1 O VAL A 274 N ILE A 250 SHEET 3 AA5 3 LEU A 267 SER A 268 -1 N LEU A 267 O ILE A 275 LINK C SER B 188 N MLZ B 189 1555 1555 1.33 LINK C MLZ B 189 N ASP B 190 1555 1555 1.34 LINK O GLY A 126 NA NA A 402 1555 1555 2.79 LINK OG SER A 128 NA NA A 402 1555 1555 2.96 LINK O VAL A 147 NA NA A 402 1555 1555 3.11 LINK O TYR A 148 NA NA A 402 1555 1555 3.18 LINK NA NA A 402 O HOH A 607 1555 1555 2.78 CISPEP 1 GLU A 279 PRO A 280 0 3.55 SITE 1 AC1 18 ALA A 226 GLU A 228 GLY A 264 HIS A 293 SITE 2 AC1 18 LYS A 294 ASN A 296 HIS A 297 TYR A 335 SITE 3 AC1 18 TRP A 352 GLU A 356 HOH A 515 HOH A 518 SITE 4 AC1 18 HOH A 584 HOH A 642 HOH A 653 HOH A 662 SITE 5 AC1 18 HOH A 695 MLZ B 189 SITE 1 AC2 7 TYR A 122 GLY A 126 GLY A 127 SER A 128 SITE 2 AC2 7 VAL A 147 TYR A 148 HOH A 607 CRYST1 83.198 83.198 95.859 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012020 0.006939 0.000000 0.00000 SCALE2 0.000000 0.013879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010432 0.00000