HEADER MEMBRANE PROTEIN 27-OCT-15 5EGI TITLE STRUCTURE OF A TRIMERIC INTRACELLULAR CATION CHANNEL FROM C. ELEGANS TITLE 2 WITH BOUND CA2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN Y57A10A.10; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 1-251; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: CELE_Y57A10A.10, Y57A10A.10; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS GS115; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 644223; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPICZA KEYWDS MEMBRANE PROTEIN, ION CHANNEL EXPDTA X-RAY DIFFRACTION AUTHOR H.T.YANG,M.H.HU,Z.F.LIU REVDAT 4 20-MAR-24 5EGI 1 COMPND HETNAM LINK ATOM REVDAT 3 25-DEC-19 5EGI 1 JRNL REVDAT 2 04-OCT-17 5EGI 1 REMARK REVDAT 1 05-OCT-16 5EGI 0 JRNL AUTH H.T.YANG,M.H.HU,J.L.GUO,X.M.OU,T.X.CAI,Z.F.LIU JRNL TITL PORE ARCHITECTURE OF TRIC CHANNELS AND INSIGHTS INTO THEIR JRNL TITL 2 GATING MECHANISM. JRNL REF NATURE V. 538 537 2016 JRNL REFN ESSN 1476-4687 JRNL PMID 27698420 JRNL DOI 10.1038/NATURE19767 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 42.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 23038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM SELECTION REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.300 REMARK 3 FREE R VALUE TEST SET COUNT : 989 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.42 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2143 REMARK 3 BIN R VALUE (WORKING SET) : 0.3135 REMARK 3 BIN FREE R VALUE : 0.3315 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 108 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 217 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 116.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.47600 REMARK 3 B22 (A**2) : 7.47600 REMARK 3 B33 (A**2) : -14.95300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.705 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.115 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.835 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.117 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 75.83 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : LIPID_DETERGENT.PARAM REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EGI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000214874. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23166 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : 0.80400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-24% PEG400, 10% GLYCEROL, 50 MM ADA REMARK 280 BUFFER (PH6.5), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 139.99500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.02500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.02500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.99750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.02500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.02500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 209.99250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.02500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.02500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.99750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.02500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.02500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 209.99250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 139.99500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA B 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 401 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 PHE A 7 REMARK 465 VAL A 240 REMARK 465 THR A 241 REMARK 465 ASP A 242 REMARK 465 PRO A 243 REMARK 465 PHE A 244 REMARK 465 ALA A 245 REMARK 465 PRO A 246 REMARK 465 ILE A 247 REMARK 465 GLU A 248 REMARK 465 ASN A 249 REMARK 465 LEU A 250 REMARK 465 PHE A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 VAL B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 PHE B 7 REMARK 465 GLN B 8 REMARK 465 LEU B 9 REMARK 465 PRO B 243 REMARK 465 PHE B 244 REMARK 465 ALA B 245 REMARK 465 PRO B 246 REMARK 465 ILE B 247 REMARK 465 GLU B 248 REMARK 465 ASN B 249 REMARK 465 LEU B 250 REMARK 465 PHE B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 465 HIS B 256 REMARK 465 HIS B 257 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 VAL C 3 REMARK 465 PRO C 4 REMARK 465 GLU C 5 REMARK 465 SER C 6 REMARK 465 PHE C 7 REMARK 465 VAL C 240 REMARK 465 THR C 241 REMARK 465 ASP C 242 REMARK 465 PRO C 243 REMARK 465 PHE C 244 REMARK 465 ALA C 245 REMARK 465 PRO C 246 REMARK 465 ILE C 247 REMARK 465 GLU C 248 REMARK 465 ASN C 249 REMARK 465 LEU C 250 REMARK 465 PHE C 251 REMARK 465 HIS C 252 REMARK 465 HIS C 253 REMARK 465 HIS C 254 REMARK 465 HIS C 255 REMARK 465 HIS C 256 REMARK 465 HIS C 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 187 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 12 -71.06 -56.15 REMARK 500 ALA A 50 -52.67 -18.56 REMARK 500 ARG A 90 83.53 -57.55 REMARK 500 ASP A 110 44.07 39.03 REMARK 500 SER A 151 74.93 -100.02 REMARK 500 THR A 183 31.91 -71.93 REMARK 500 ASN A 185 90.12 -54.08 REMARK 500 PRO A 190 -7.77 -58.65 REMARK 500 TYR A 212 76.64 45.15 REMARK 500 ALA A 215 135.12 168.17 REMARK 500 LEU B 46 4.92 -67.28 REMARK 500 ALA B 86 -52.66 -26.33 REMARK 500 PRO B 87 -7.96 -53.85 REMARK 500 ARG B 90 70.60 -68.45 REMARK 500 THR B 119 -66.90 -23.04 REMARK 500 TYR B 148 57.08 -142.43 REMARK 500 PRO B 182 28.39 -68.01 REMARK 500 HIS B 184 3.13 -49.00 REMARK 500 ASN B 185 74.23 -103.12 REMARK 500 PRO B 190 2.15 -49.25 REMARK 500 THR B 211 -16.51 -45.04 REMARK 500 TYR B 212 12.94 -152.55 REMARK 500 ALA B 215 154.18 162.05 REMARK 500 PRO C 83 109.18 -59.37 REMARK 500 PRO C 87 -1.45 -57.27 REMARK 500 SER C 138 -75.11 -46.77 REMARK 500 LEU C 181 77.50 -102.86 REMARK 500 THR C 183 47.24 -73.93 REMARK 500 PRO C 190 3.00 -57.71 REMARK 500 LEU C 213 149.59 -175.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 102 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PT5 A 301 REMARK 610 PT5 B 301 REMARK 610 PT5 C 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 401 O REMARK 620 2 HOH B 401 O 0.0 REMARK 620 3 HOH B 402 O 93.7 93.7 REMARK 620 4 HOH B 402 O 93.7 93.7 172.6 REMARK 620 5 HOH C 404 O 64.4 64.4 107.5 75.7 REMARK 620 6 HOH C 404 O 64.5 64.5 75.8 107.6 128.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT5 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT5 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT5 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMU C 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EIK RELATED DB: PDB REMARK 900 THIS PROTEIN SHARE HOMOLOGY WITH THE ONE IN D_1000214874 AND REMARK 900 REPRESENT TWO DIFFERENT CONFORMATIONAL STATES. DBREF 5EGI A 1 251 UNP Q9NA75 Q9NA75_CAEEL 1 251 DBREF 5EGI B 1 251 UNP Q9NA75 Q9NA75_CAEEL 1 251 DBREF 5EGI C 1 251 UNP Q9NA75 Q9NA75_CAEEL 1 251 SEQADV 5EGI HIS A 252 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS A 253 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS A 254 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS A 255 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS A 256 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS A 257 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 252 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 253 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 254 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 255 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 256 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS B 257 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 252 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 253 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 254 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 255 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 256 UNP Q9NA75 EXPRESSION TAG SEQADV 5EGI HIS C 257 UNP Q9NA75 EXPRESSION TAG SEQRES 1 A 257 MET VAL VAL PRO GLU SER PHE GLN LEU ASP GLN GLU ILE SEQRES 2 A 257 LEU LEU ASP ALA GLY ALA GLN LEU HIS ARG LEU LYS MET SEQRES 3 A 257 TYR PRO TYR PHE ASP VAL ALA HIS TYR LEU LEU MET ILE SEQRES 4 A 257 ILE GLU VAL ARG ASP ASP LEU GLY SER ALA ALA SER ILE SEQRES 5 A 257 PHE SER ARG LYS HIS PRO LEU SER CYS TRP LEU SER SER SEQRES 6 A 257 MET LEU MET CYS PHE ALA ASP ALA PHE LEU ALA ASN PHE SEQRES 7 A 257 LEU LEU GLY GLU PRO VAL ILE ALA PRO PHE LYS ARG HIS SEQRES 8 A 257 ASP ASP ILE ILE LEU ALA THR ILE ILE TRP TYR LEU VAL SEQRES 9 A 257 PHE TYR ALA PRO PHE ASP GLY ILE TYR LYS ILE ALA LYS SEQRES 10 A 257 ILE THR PRO VAL LYS CYS VAL LEU ALA VAL MET LYS GLU SEQRES 11 A 257 VAL LYS ARG ALA TYR LYS VAL SER HIS GLY VAL SER HIS SEQRES 12 A 257 ALA ALA LYS LEU TYR PRO ASN SER TYR ILE VAL GLN VAL SEQRES 13 A 257 LEU VAL GLY THR ALA LYS GLY ALA GLY SER GLY ILE VAL SEQRES 14 A 257 ARG THR LEU GLU GLN LEU VAL ARG GLY VAL TRP LEU PRO SEQRES 15 A 257 THR HIS ASN GLU LEU LEU ARG PRO SER PHE ALA THR LYS SEQRES 16 A 257 ALA CYS VAL VAL ALA ALA SER VAL LEU ALA LEU GLU LYS SEQRES 17 A 257 SER GLY THR TYR LEU THR ALA PRO HIS ASP LEU VAL TYR SEQRES 18 A 257 LEU VAL ILE VAL GLY PHE PHE VAL TYR PHE LYS LEU SER SEQRES 19 A 257 ALA VAL ILE LEU HIS VAL THR ASP PRO PHE ALA PRO ILE SEQRES 20 A 257 GLU ASN LEU PHE HIS HIS HIS HIS HIS HIS SEQRES 1 B 257 MET VAL VAL PRO GLU SER PHE GLN LEU ASP GLN GLU ILE SEQRES 2 B 257 LEU LEU ASP ALA GLY ALA GLN LEU HIS ARG LEU LYS MET SEQRES 3 B 257 TYR PRO TYR PHE ASP VAL ALA HIS TYR LEU LEU MET ILE SEQRES 4 B 257 ILE GLU VAL ARG ASP ASP LEU GLY SER ALA ALA SER ILE SEQRES 5 B 257 PHE SER ARG LYS HIS PRO LEU SER CYS TRP LEU SER SER SEQRES 6 B 257 MET LEU MET CYS PHE ALA ASP ALA PHE LEU ALA ASN PHE SEQRES 7 B 257 LEU LEU GLY GLU PRO VAL ILE ALA PRO PHE LYS ARG HIS SEQRES 8 B 257 ASP ASP ILE ILE LEU ALA THR ILE ILE TRP TYR LEU VAL SEQRES 9 B 257 PHE TYR ALA PRO PHE ASP GLY ILE TYR LYS ILE ALA LYS SEQRES 10 B 257 ILE THR PRO VAL LYS CYS VAL LEU ALA VAL MET LYS GLU SEQRES 11 B 257 VAL LYS ARG ALA TYR LYS VAL SER HIS GLY VAL SER HIS SEQRES 12 B 257 ALA ALA LYS LEU TYR PRO ASN SER TYR ILE VAL GLN VAL SEQRES 13 B 257 LEU VAL GLY THR ALA LYS GLY ALA GLY SER GLY ILE VAL SEQRES 14 B 257 ARG THR LEU GLU GLN LEU VAL ARG GLY VAL TRP LEU PRO SEQRES 15 B 257 THR HIS ASN GLU LEU LEU ARG PRO SER PHE ALA THR LYS SEQRES 16 B 257 ALA CYS VAL VAL ALA ALA SER VAL LEU ALA LEU GLU LYS SEQRES 17 B 257 SER GLY THR TYR LEU THR ALA PRO HIS ASP LEU VAL TYR SEQRES 18 B 257 LEU VAL ILE VAL GLY PHE PHE VAL TYR PHE LYS LEU SER SEQRES 19 B 257 ALA VAL ILE LEU HIS VAL THR ASP PRO PHE ALA PRO ILE SEQRES 20 B 257 GLU ASN LEU PHE HIS HIS HIS HIS HIS HIS SEQRES 1 C 257 MET VAL VAL PRO GLU SER PHE GLN LEU ASP GLN GLU ILE SEQRES 2 C 257 LEU LEU ASP ALA GLY ALA GLN LEU HIS ARG LEU LYS MET SEQRES 3 C 257 TYR PRO TYR PHE ASP VAL ALA HIS TYR LEU LEU MET ILE SEQRES 4 C 257 ILE GLU VAL ARG ASP ASP LEU GLY SER ALA ALA SER ILE SEQRES 5 C 257 PHE SER ARG LYS HIS PRO LEU SER CYS TRP LEU SER SER SEQRES 6 C 257 MET LEU MET CYS PHE ALA ASP ALA PHE LEU ALA ASN PHE SEQRES 7 C 257 LEU LEU GLY GLU PRO VAL ILE ALA PRO PHE LYS ARG HIS SEQRES 8 C 257 ASP ASP ILE ILE LEU ALA THR ILE ILE TRP TYR LEU VAL SEQRES 9 C 257 PHE TYR ALA PRO PHE ASP GLY ILE TYR LYS ILE ALA LYS SEQRES 10 C 257 ILE THR PRO VAL LYS CYS VAL LEU ALA VAL MET LYS GLU SEQRES 11 C 257 VAL LYS ARG ALA TYR LYS VAL SER HIS GLY VAL SER HIS SEQRES 12 C 257 ALA ALA LYS LEU TYR PRO ASN SER TYR ILE VAL GLN VAL SEQRES 13 C 257 LEU VAL GLY THR ALA LYS GLY ALA GLY SER GLY ILE VAL SEQRES 14 C 257 ARG THR LEU GLU GLN LEU VAL ARG GLY VAL TRP LEU PRO SEQRES 15 C 257 THR HIS ASN GLU LEU LEU ARG PRO SER PHE ALA THR LYS SEQRES 16 C 257 ALA CYS VAL VAL ALA ALA SER VAL LEU ALA LEU GLU LYS SEQRES 17 C 257 SER GLY THR TYR LEU THR ALA PRO HIS ASP LEU VAL TYR SEQRES 18 C 257 LEU VAL ILE VAL GLY PHE PHE VAL TYR PHE LYS LEU SER SEQRES 19 C 257 ALA VAL ILE LEU HIS VAL THR ASP PRO PHE ALA PRO ILE SEQRES 20 C 257 GLU ASN LEU PHE HIS HIS HIS HIS HIS HIS HET PT5 A 301 61 HET PT5 B 301 61 HET CA B 302 1 HET PT5 C 301 61 HET DMU C 302 33 HETNAM PT5 [(2R)-1-OCTADECANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R, HETNAM 2 PT5 6S)-2,3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY- HETNAM 3 PT5 CYCLOHEXYL]OXY-PHOSPHO RYL]OXY-PROPAN-2-YL] (8Z)- HETNAM 4 PT5 ICOSA-5,8,11,14-TETRAENOATE HETNAM CA CALCIUM ION HETNAM DMU DECYL-BETA-D-MALTOPYRANOSIDE HETSYN PT5 PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE; PTDINS(4,5)P2 HETSYN DMU DECYLMALTOSIDE FORMUL 4 PT5 3(C47 H85 O19 P3) FORMUL 6 CA CA 2+ FORMUL 8 DMU C22 H42 O11 FORMUL 9 HOH *7(H2 O) HELIX 1 AA1 GLN A 8 LEU A 24 1 17 HELIX 2 AA2 PRO A 28 ASP A 45 1 18 HELIX 3 AA3 LEU A 46 SER A 48 5 3 HELIX 4 AA4 ALA A 49 HIS A 57 1 9 HELIX 5 AA5 HIS A 57 PHE A 70 1 14 HELIX 6 AA6 PHE A 70 LEU A 80 1 11 HELIX 7 AA7 ILE A 85 LYS A 89 5 5 HELIX 8 AA8 ARG A 90 ALA A 107 1 18 HELIX 9 AA9 ASP A 110 ILE A 118 1 9 HELIX 10 AB1 PRO A 120 TYR A 148 1 29 HELIX 11 AB2 SER A 151 GLY A 165 1 15 HELIX 12 AB3 GLY A 165 ARG A 177 1 13 HELIX 13 AB4 ARG A 189 GLY A 210 1 22 HELIX 14 AB5 PRO A 216 HIS A 239 1 24 HELIX 15 AB6 GLN B 11 LEU B 24 1 14 HELIX 16 AB7 PRO B 28 LEU B 46 1 19 HELIX 17 AB8 ALA B 49 HIS B 57 1 9 HELIX 18 AB9 HIS B 57 PHE B 70 1 14 HELIX 19 AC1 PHE B 70 GLY B 81 1 12 HELIX 20 AC2 ILE B 85 LYS B 89 5 5 HELIX 21 AC3 ARG B 90 ALA B 107 1 18 HELIX 22 AC4 ASP B 110 LYS B 117 1 8 HELIX 23 AC5 ILE B 118 TYR B 148 1 31 HELIX 24 AC6 SER B 151 GLY B 165 1 15 HELIX 25 AC7 GLY B 165 GLY B 178 1 14 HELIX 26 AC8 PRO B 190 GLY B 210 1 21 HELIX 27 AC9 PRO B 216 THR B 241 1 26 HELIX 28 AD1 ASP C 10 LEU C 24 1 15 HELIX 29 AD2 PHE C 30 LEU C 46 1 17 HELIX 30 AD3 ALA C 49 HIS C 57 1 9 HELIX 31 AD4 HIS C 57 PHE C 70 1 14 HELIX 32 AD5 PHE C 70 GLY C 81 1 12 HELIX 33 AD6 ILE C 85 LYS C 89 5 5 HELIX 34 AD7 ARG C 90 ALA C 107 1 18 HELIX 35 AD8 ASP C 110 ILE C 118 1 9 HELIX 36 AD9 ILE C 118 TYR C 148 1 31 HELIX 37 AE1 SER C 151 GLY C 165 1 15 HELIX 38 AE2 GLY C 165 GLY C 178 1 14 HELIX 39 AE3 ARG C 189 GLY C 210 1 22 HELIX 40 AE4 PRO C 216 HIS C 239 1 24 LINK CA CA B 302 O HOH B 401 1555 1555 2.74 LINK CA CA B 302 O HOH B 401 1555 7555 2.74 LINK CA CA B 302 O HOH B 402 1555 1555 2.40 LINK CA CA B 302 O HOH B 402 1555 7555 2.40 LINK CA CA B 302 O HOH C 404 1555 1555 2.62 LINK CA CA B 302 O HOH C 404 1555 7555 2.61 CISPEP 1 TYR A 27 PRO A 28 0 -0.27 CISPEP 2 TYR B 27 PRO B 28 0 0.75 CISPEP 3 TYR C 27 PRO C 28 0 0.67 SITE 1 AC1 17 GLU A 41 MET A 68 LYS A 129 ARG A 133 SITE 2 AC1 17 ALA A 164 GLY A 165 SER A 166 GLY A 167 SITE 3 AC1 17 ARG A 170 HIS A 184 GLU A 186 PRO A 190 SITE 4 AC1 17 SER A 191 THR A 194 SER B 60 SER B 64 SITE 5 AC1 17 ARG B 177 SITE 1 AC2 18 GLU B 41 LEU B 79 LYS B 129 ARG B 133 SITE 2 AC2 18 ALA B 164 SER B 166 GLY B 167 ILE B 168 SITE 3 AC2 18 ARG B 170 HIS B 184 GLU B 186 ALA B 193 SITE 4 AC2 18 THR B 194 LEU C 63 LEU C 67 PHE C 74 SITE 5 AC2 18 ARG C 177 DMU C 302 SITE 1 AC3 3 HOH B 401 HOH B 402 HOH C 404 SITE 1 AC4 17 LEU A 67 LEU A 172 GLU C 41 MET C 68 SITE 2 AC4 17 PHE C 78 LYS C 129 ARG C 133 THR C 160 SITE 3 AC4 17 ALA C 164 GLY C 165 SER C 166 GLY C 167 SITE 4 AC4 17 ILE C 168 ARG C 170 HIS C 184 PRO C 190 SITE 5 AC4 17 THR C 194 SITE 1 AC5 8 LEU B 157 THR B 194 VAL B 198 PT5 B 301 SITE 2 AC5 8 PHE C 53 HIS C 57 LEU C 59 SER C 60 CRYST1 102.050 102.050 279.990 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009799 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003572 0.00000