HEADER HYDROLASE/HYDROLASE INHIBITOR 27-OCT-15 5EGM
TITLE DEVELOPMENT OF A NOVEL TRICYCLIC CLASS OF POTENT AND SELECTIVE FIXA
TITLE 2 INHIBITORS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: COAGULATION FACTOR IX;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC;
COMPND 5 EC: 3.4.21.22;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES;
COMPND 8 MOL_ID: 2;
COMPND 9 MOLECULE: COAGULATION FACTOR IX;
COMPND 10 CHAIN: B;
COMPND 11 FRAGMENT: UNP RESIDUES 131-191;
COMPND 12 SYNONYM: CHRISTMAS FACTOR,PLASMA THROMBOPLASTIN COMPONENT,PTC;
COMPND 13 EC: 3.4.21.22;
COMPND 14 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: F9;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 MOL_ID: 2;
SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 10 ORGANISM_COMMON: HUMAN;
SOURCE 11 ORGANISM_TAXID: 9606;
SOURCE 12 GENE: F9;
SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS SERINE PROTEINASE, BLOOD COAGULATION, COAGULATION FACTOR, HYDROLASE-2
KEYWDS 2 HYDROLASE INHIBITOR COMPLEX, HYDROLASE-HYDROLASE INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR D.MENG,P.ANDRE,T.J.BATEMAN,R.BERGER,Y.CHEN,K.DESAI,S.DEWNANI,
AUTHOR 2 K.ELLSWORTH,D.FENG,W.M.GEISSLER,L.GUO,A.HRUZA,T.JIAN,H.LI,
AUTHOR 3 D.L.PARKER,P.REICHERT,E.C.SHERER,C.J.SMITH,L.M.SONATORE,R.TSCHIRRET-
AUTHOR 4 GUTH,J.WU,J.XU,T.ZHANG,L.CAMPEAU,R.ORR,M.POIRIER,J.MCCABE-DUNN,
AUTHOR 5 K.ARAKI,T.NISHIMURA,I.SAKURADA,T.HIRABAYASHI,H.B.WOOD
REVDAT 4 20-NOV-24 5EGM 1 REMARK
REVDAT 3 27-SEP-23 5EGM 1 REMARK
REVDAT 2 22-NOV-17 5EGM 1 REMARK
REVDAT 1 18-NOV-15 5EGM 0
JRNL AUTH D.MENG,P.ANDRE,T.J.BATEMAN,R.BERGER,Y.H.CHEN,K.DESAI,
JRNL AUTH 2 S.DEWNANI,K.ELLSWORTH,D.FENG,W.M.GEISSLER,L.GUO,A.HRUZA,
JRNL AUTH 3 T.JIAN,H.LI,J.METZGER,D.L.PARKER,P.REICHERT,E.C.SHERER,
JRNL AUTH 4 C.J.SMITH,L.M.SONATORE,R.TSCHIRRET-GUTH,J.WU,J.XU,T.ZHANG,
JRNL AUTH 5 L.C.CAMPEAU,R.ORR,M.POIRIER,J.MCCABE-DUNN,K.ARAKI,
JRNL AUTH 6 T.NISHIMURA,I.SAKURADA,T.HIRABAYASHI,H.B.WOOD
JRNL TITL DEVELOPMENT OF A NOVEL TRICYCLIC CLASS OF POTENT AND
JRNL TITL 2 SELECTIVE FIXA INHIBITORS.
JRNL REF BIOORG.MED.CHEM.LETT. V. 25 5437 2015
JRNL REFN ESSN 1464-3405
JRNL PMID 26318999
JRNL DOI 10.1016/J.BMCL.2015.07.078
REMARK 2
REMARK 2 RESOLUTION. 1.84 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.5
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.25
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6
REMARK 3 NUMBER OF REFLECTIONS : 29804
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.149
REMARK 3 R VALUE (WORKING SET) : 0.148
REMARK 3 FREE R VALUE : 0.171
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980
REMARK 3 FREE R VALUE TEST SET COUNT : 1484
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 15
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.91
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.64
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2880
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1969
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2733
REMARK 3 BIN R VALUE (WORKING SET) : 0.1945
REMARK 3 BIN FREE R VALUE : 0.2407
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2243
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 54
REMARK 3 SOLVENT ATOMS : 221
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 26.75
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.60
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.98190
REMARK 3 B22 (A**2) : -0.98190
REMARK 3 B33 (A**2) : 1.96390
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.185
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.097
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.091
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.135
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.093
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 4679 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 8456 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1015 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 57 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 759 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 4679 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 305 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 5228 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.10
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.28
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.64
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -3.5663 -33.7469 -3.1265
REMARK 3 T TENSOR
REMARK 3 T11: -0.0264 T22: -0.1122
REMARK 3 T33: -0.1010 T12: 0.0055
REMARK 3 T13: 0.0122 T23: 0.0104
REMARK 3 L TENSOR
REMARK 3 L11: 1.5098 L22: 1.4985
REMARK 3 L33: 1.9576 L12: 0.2680
REMARK 3 L13: 0.2308 L23: -0.0918
REMARK 3 S TENSOR
REMARK 3 S11: -0.0572 S12: 0.0750 S13: -0.1416
REMARK 3 S21: -0.1308 S22: 0.0681 S23: 0.0687
REMARK 3 S31: 0.2087 S32: 0.0023 S33: -0.0110
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): 5.9705 -28.7823 19.9687
REMARK 3 T TENSOR
REMARK 3 T11: -0.0356 T22: 0.0406
REMARK 3 T33: -0.0567 T12: 0.0094
REMARK 3 T13: -0.0141 T23: 0.0198
REMARK 3 L TENSOR
REMARK 3 L11: 1.1144 L22: 0.9798
REMARK 3 L33: 2.0203 L12: -0.1588
REMARK 3 L13: 0.5723 L23: -0.1535
REMARK 3 S TENSOR
REMARK 3 S11: -0.0607 S12: -0.1945 S13: 0.0792
REMARK 3 S21: 0.0655 S22: -0.0574 S23: -0.0202
REMARK 3 S31: -0.1256 S32: 0.2409 S33: 0.1181
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5EGM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-15.
REMARK 100 THE DEPOSITION ID IS D_1000214852.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 30-JAN-13
REMARK 200 TEMPERATURE (KELVIN) : 95
REMARK 200 PH : 9.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.541780
REMARK 200 MONOCHROMATOR : OSMIC
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION SEPTEMBER 2
REMARK 200 DATA SCALING SOFTWARE : AUTOPROC, SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29836
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.841
REMARK 200 RESOLUTION RANGE LOW (A) : 41.470
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 200 DATA REDUNDANCY : 3.500
REMARK 200 R MERGE (I) : 0.05200
REMARK 200 R SYM (I) : 0.05200
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2
REMARK 200 DATA REDUNDANCY IN SHELL : 3.60
REMARK 200 R MERGE FOR SHELL (I) : 0.49500
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: 1RFN
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 56.17
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CHES, PH 9.0, 1.3 M TRI-SODIUM
REMARK 280 REMARK 280 CITRATE AND 3 MM COMPOUND (CROSS SEEDED WITH CRYSTALS
REMARK 280 GROWN FROM REMARK 280 50 MM TRIS, PH 7.2, 1.45 M AMMONIUM
REMARK 280 SULFATE, 2.0 M SODIUM REMARK 280 CHLORIDE AND 3 MM COMPOUND),
REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 X+2/3,Y+1/3,Z+1/3
REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3
REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3
REMARK 290 7555 X+1/3,Y+2/3,Z+2/3
REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3
REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.64900
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.66486
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.56167
REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.64900
REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.66486
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.56167
REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.64900
REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.66486
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.56167
REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.32973
REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 63.12333
REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.32973
REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 63.12333
REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.32973
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 63.12333
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 13670 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET B 84
REMARK 465 ASP B 85
REMARK 465 THR B 140
REMARK 465 SER B 141
REMARK 465 LYS B 142
REMARK 465 LEU B 143
REMARK 465 THR B 144
REMARK 465 ARG B 145
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 HIS A 71 -64.48 -135.96
REMARK 500 HIS A 78 -10.87 79.26
REMARK 500 SER A 214 -67.10 -107.51
REMARK 500 GLU A 217 -114.90 -111.80
REMARK 500 GLN B 97 -80.05 -115.51
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A 562 DISTANCE = 6.05 ANGSTROMS
REMARK 525 HOH A 563 DISTANCE = 6.53 ANGSTROMS
REMARK 525 HOH A 564 DISTANCE = 7.35 ANGSTROMS
REMARK 525 HOH B 257 DISTANCE = 5.83 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 301 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 70 OE1
REMARK 620 2 ASN A 72 O 88.8
REMARK 620 3 GLU A 75 O 161.0 81.2
REMARK 620 4 GLU A 77 OE1 91.2 88.0 104.4
REMARK 620 5 GLU A 80 OE2 99.5 168.8 88.7 99.2
REMARK 620 6 HOH A 422 O 87.9 98.5 77.8 173.4 74.5
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 5NY A 303
DBREF 5EGM A 16 245 UNP P00740 FA9_HUMAN 227 461
DBREF 5EGM B 85 145 UNP P00740 FA9_HUMAN 131 191
SEQADV 5EGM ALA A 150 UNP P00740 ARG 364 ENGINEERED MUTATION
SEQADV 5EGM MET B 84 UNP P00740 INITIATING METHIONINE
SEQRES 1 A 235 VAL VAL GLY GLY GLU ASP ALA LYS PRO GLY GLN PHE PRO
SEQRES 2 A 235 TRP GLN VAL VAL LEU ASN GLY LYS VAL ASP ALA PHE CYS
SEQRES 3 A 235 GLY GLY SER ILE VAL ASN GLU LYS TRP ILE VAL THR ALA
SEQRES 4 A 235 ALA HIS CYS VAL GLU THR GLY VAL LYS ILE THR VAL VAL
SEQRES 5 A 235 ALA GLY GLU HIS ASN ILE GLU GLU THR GLU HIS THR GLU
SEQRES 6 A 235 GLN LYS ARG ASN VAL ILE ARG ILE ILE PRO HIS HIS ASN
SEQRES 7 A 235 TYR ASN ALA ALA ILE ASN LYS TYR ASN HIS ASP ILE ALA
SEQRES 8 A 235 LEU LEU GLU LEU ASP GLU PRO LEU VAL LEU ASN SER TYR
SEQRES 9 A 235 VAL THR PRO ILE CYS ILE ALA ASP LYS GLU TYR THR ASN
SEQRES 10 A 235 ILE PHE LEU LYS PHE GLY SER GLY TYR VAL SER GLY TRP
SEQRES 11 A 235 GLY ARG VAL PHE HIS LYS GLY ALA SER ALA LEU VAL LEU
SEQRES 12 A 235 GLN TYR LEU ARG VAL PRO LEU VAL ASP ARG ALA THR CYS
SEQRES 13 A 235 LEU ARG SER THR LYS PHE THR ILE TYR ASN ASN MET PHE
SEQRES 14 A 235 CYS ALA GLY PHE HIS GLU GLY GLY ARG ASP SER CYS GLN
SEQRES 15 A 235 GLY ASP SER GLY GLY PRO HIS VAL THR GLU VAL GLU GLY
SEQRES 16 A 235 THR SER PHE LEU THR GLY ILE ILE SER TRP GLY GLU GLU
SEQRES 17 A 235 CYS ALA MET LYS GLY LYS TYR GLY ILE TYR THR LYS VAL
SEQRES 18 A 235 SER ARG TYR VAL ASN TRP ILE LYS GLU LYS THR LYS LEU
SEQRES 19 A 235 THR
SEQRES 1 B 62 MET ASP VAL THR CYS ASN ILE LYS ASN GLY ARG CYS GLU
SEQRES 2 B 62 GLN PHE CYS LYS ASN SER ALA ASP ASN LYS VAL VAL CYS
SEQRES 3 B 62 SER CYS THR GLU GLY TYR ARG LEU ALA GLU ASN GLN LYS
SEQRES 4 B 62 SER CYS GLU PRO ALA VAL PRO PHE PRO CYS GLY ARG VAL
SEQRES 5 B 62 SER VAL SER GLN THR SER LYS LEU THR ARG
HET NA A 301 1
HET NHE A 302 30
HET 5NY A 303 63
HETNAM NA SODIUM ION
HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
HETNAM 5NY 2-CHLORANYL-~{N}-[(7~{S})-2-METHYL-7-PHENYL-10-(1~{H}-
HETNAM 2 5NY 1,2,3,4-TETRAZOL-5-YL)-8,9-DIHYDRO-6~{H}-PYRIDO[1,2-
HETNAM 3 5NY A]INDOL-7-YL]-4-(1,2,4-TRIAZOL-4-YL)BENZAMIDE
HETSYN NHE N-CYCLOHEXYLTAURINE; CHES
FORMUL 3 NA NA 1+
FORMUL 4 NHE C8 H17 N O3 S
FORMUL 5 5NY C29 H24 CL N9 O
FORMUL 6 HOH *221(H2 O)
HELIX 1 AA1 ALA A 55 VAL A 59 5 5
HELIX 2 AA2 ASP A 125 PHE A 133 1 11
HELIX 3 AA3 ASP A 164 SER A 171 1 8
HELIX 4 AA4 TYR A 234 LYS A 243 1 10
HELIX 5 AA5 ILE B 90 CYS B 95 5 6
SHEET 1 AA1 8 GLU A 20 ASP A 21 0
SHEET 2 AA1 8 GLN A 156 VAL A 163 -1 O TYR A 157 N GLU A 20
SHEET 3 AA1 8 MET A 180 ALA A 183 -1 O CYS A 182 N VAL A 163
SHEET 4 AA1 8 GLY A 226 LYS A 230 -1 O TYR A 228 N PHE A 181
SHEET 5 AA1 8 THR A 206 TRP A 215 -1 N TRP A 215 O ILE A 227
SHEET 6 AA1 8 PRO A 198 VAL A 203 -1 N VAL A 203 O THR A 206
SHEET 7 AA1 8 SER A 135 GLY A 140 -1 N TYR A 137 O VAL A 200
SHEET 8 AA1 8 GLN A 156 VAL A 163 -1 O VAL A 160 N GLY A 136
SHEET 1 AA2 7 GLN A 30 ASN A 34 0
SHEET 2 AA2 7 CYS A 42 ASN A 48 -1 O CYS A 42 N LEU A 33
SHEET 3 AA2 7 TRP A 51 THR A 54 -1 O TRP A 51 N VAL A 47
SHEET 4 AA2 7 ALA A 104 LEU A 108 -1 O ALA A 104 N THR A 54
SHEET 5 AA2 7 GLN A 81 PRO A 90 -1 N ILE A 89 O LEU A 105
SHEET 6 AA2 7 THR A 65 ALA A 68 -1 N VAL A 66 O ARG A 83
SHEET 7 AA2 7 GLN A 30 ASN A 34 -1 N ASN A 34 O THR A 65
SHEET 1 AA3 2 PHE B 98 SER B 102 0
SHEET 2 AA3 2 LYS B 106 SER B 110 -1 O LYS B 106 N SER B 102
SHEET 1 AA4 2 TYR B 115 LEU B 117 0
SHEET 2 AA4 2 CYS B 124 PRO B 126 -1 O GLU B 125 N ARG B 116
SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.04
SSBOND 2 CYS A 122 CYS B 132 1555 1555 2.07
SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.02
SSBOND 4 CYS A 191 CYS A 220 1555 1555 2.04
SSBOND 5 CYS B 88 CYS B 99 1555 1555 2.04
SSBOND 6 CYS B 95 CYS B 109 1555 1555 2.02
SSBOND 7 CYS B 111 CYS B 124 1555 1555 2.08
LINK OE1 GLU A 70 NA NA A 301 1555 1555 2.23
LINK O ASN A 72 NA NA A 301 1555 1555 2.38
LINK O GLU A 75 NA NA A 301 1555 1555 2.24
LINK OE1 GLU A 77 NA NA A 301 1555 1555 2.36
LINK OE2 GLU A 80 NA NA A 301 1555 1555 2.40
LINK NA NA A 301 O HOH A 422 1555 1555 2.34
SITE 1 AC1 6 GLU A 70 ASN A 72 GLU A 75 GLU A 77
SITE 2 AC1 6 GLU A 80 HOH A 422
SITE 1 AC2 8 ASP A 21 LYS A 132 PHE A 145 ALA A 152
SITE 2 AC2 8 LEU A 153 VAL A 154 HOH A 436 HOH A 454
SITE 1 AC3 15 HIS A 57 TYR A 99 HIS A 147 PHE A 174
SITE 2 AC3 15 SER A 190 CYS A 191 GLN A 192 SER A 195
SITE 3 AC3 15 ILE A 213 TRP A 215 GLY A 216 GLU A 217
SITE 4 AC3 15 CYS A 220 HOH A 448 HOH A 478
CRYST1 99.298 99.298 94.685 90.00 90.00 120.00 H 3 9
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010071 0.005814 0.000000 0.00000
SCALE2 0.000000 0.011629 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010561 0.00000