HEADER TRANSFERASE 27-OCT-15 5EGP TITLE CRYSTAL STRUCTURE OF THE S-METHYLTRANSFERASE TMTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIE/COQ5 FAMILY METHYLTRANSFERASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS Z5; SOURCE 3 ORGANISM_TAXID: 1437362; SOURCE 4 GENE: Y699_02735; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS BIS-THIOMETHYLTRANSFERASE, GLIOTOXIN, EPIPOLYTHIODIOXOPIPERAZINE, KEYWDS 2 ASPERGILLUS FUMIGATUS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.R.DUELL,M.GLASER,I.ANTES,M.GROLL,E.M.HUBER REVDAT 2 27-APR-16 5EGP 1 JRNL REVDAT 1 03-FEB-16 5EGP 0 JRNL AUTH E.R.DUELL,M.GLASER,C.LE CHAPELAIN,I.ANTES,M.GROLL,E.M.HUBER JRNL TITL SEQUENTIAL INACTIVATION OF GLIOTOXIN BY THE JRNL TITL 2 S-METHYLTRANSFERASE TMTA. JRNL REF ACS CHEM.BIOL. V. 11 1082 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 26808594 JRNL DOI 10.1021/ACSCHEMBIO.5B00905 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 84984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.134 REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4473 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6131 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 322 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4449 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.18000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.074 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.038 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.323 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4659 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4397 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6341 ; 1.349 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10157 ; 0.913 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 569 ; 5.856 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;37.754 ;25.248 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 780 ;13.281 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.808 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 715 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5217 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1027 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2270 ; 1.242 ; 1.134 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2264 ; 1.234 ; 1.129 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2825 ; 1.572 ; 1.701 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2826 ; 1.572 ; 1.701 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2389 ; 1.853 ; 1.492 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2390 ; 1.853 ; 1.493 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3513 ; 2.154 ; 2.096 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5779 ; 3.119 ;11.302 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5780 ; 3.119 ;11.305 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 9056 ; 1.886 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 162 ;26.718 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 9306 ; 7.003 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9337 -10.2574 4.6115 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0180 REMARK 3 T33: 0.0150 T12: 0.0002 REMARK 3 T13: 0.0052 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.1352 L22: 0.4418 REMARK 3 L33: 0.3840 L12: 0.0709 REMARK 3 L13: 0.1353 L23: -0.1720 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.0195 S13: -0.0138 REMARK 3 S21: 0.0746 S22: 0.0140 S23: 0.0026 REMARK 3 S31: -0.0551 S32: 0.0177 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1382 16.2366 -12.5128 REMARK 3 T TENSOR REMARK 3 T11: 0.0153 T22: 0.0210 REMARK 3 T33: 0.0211 T12: -0.0061 REMARK 3 T13: 0.0010 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.1409 L22: 0.3690 REMARK 3 L33: 0.2774 L12: -0.0378 REMARK 3 L13: -0.1728 L23: -0.0083 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.0062 S13: 0.0217 REMARK 3 S21: -0.0216 S22: 0.0548 S23: 0.0166 REMARK 3 S31: 0.0537 S32: -0.0034 S33: -0.0203 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EGP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89458 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM ACETATE, 2.2 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.60500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 SER A -25 REMARK 465 TYR A -24 REMARK 465 TYR A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 ASP A -16 REMARK 465 TYR A -15 REMARK 465 ASP A -14 REMARK 465 ILE A -13 REMARK 465 PRO A -12 REMARK 465 THR A -11 REMARK 465 THR A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLU A -1 REMARK 465 LEU A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 MET B -26 REMARK 465 SER B -25 REMARK 465 TYR B -24 REMARK 465 TYR B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 ASP B -16 REMARK 465 TYR B -15 REMARK 465 ASP B -14 REMARK 465 ILE B -13 REMARK 465 PRO B -12 REMARK 465 THR B -11 REMARK 465 THR B -10 REMARK 465 GLU B -9 REMARK 465 ASN B -8 REMARK 465 LEU B -7 REMARK 465 TYR B -6 REMARK 465 PHE B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLU B -1 REMARK 465 LEU B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 465 SER B 4 REMARK 465 ASP B 5 REMARK 465 TYR B 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 6 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB ASN B 159 O HOH B 633 2.12 REMARK 500 C PRO A 287 O HOH A 404 2.18 REMARK 500 OD2 ASP B 225 O HOH B 401 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 112 81.04 -159.89 REMARK 500 ASP B 112 84.71 -165.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 682 DISTANCE = 5.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 305 DBREF 5EGP A -26 287 PDB 5EGP 5EGP -26 287 DBREF 5EGP B -26 287 PDB 5EGP 5EGP -26 287 SEQRES 1 A 314 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 314 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER GLU SEQRES 3 A 314 LEU MET SER LYS SER ASP TYR ILE GLN ASN MET PHE GLN SEQRES 4 A 314 THR LYS SER PHE VAL ASP ARG TYR LYS TYR THR GLU LYS SEQRES 5 A 314 LEU THR GLY LEU TYR ALA GLN THR LEU VAL ASP TYR SER SEQRES 6 A 314 GLY VAL ALA ASN THR SER GLN LYS PRO LEU VAL VAL LEU SEQRES 7 A 314 ASP ASN ALA CYS GLY ILE GLY ALA VAL SER SER VAL LEU SEQRES 8 A 314 ASN HIS THR LEU GLN ASP GLU ALA LYS LYS THR TRP LYS SEQRES 9 A 314 LEU THR CYS GLY ASP LEU SER GLU GLY MET LEU GLU THR SEQRES 10 A 314 THR LYS ARG ARG LEU GLN ASP GLU GLY TRP VAL ASN ALA SEQRES 11 A 314 GLU THR LYS ILE VAL ASN ALA LEU ASP THR GLY LEU PRO SEQRES 12 A 314 ASP GLY HIS TYR THR HIS VAL PHE VAL ALA PHE GLY PHE SEQRES 13 A 314 GLN SER PHE PRO ASP ALA ASN ALA ALA LEU LYS GLU CYS SEQRES 14 A 314 PHE ARG ILE LEU ALA SER GLY GLY ILE LEU ALA SER SER SEQRES 15 A 314 THR TRP GLN ASN PHE ASN TRP ILE PRO ILE MET LYS ALA SEQRES 16 A 314 ALA ILE GLU THR ILE PRO GLY ASN LEU PRO PHE PRO THR SEQRES 17 A 314 GLN LYS GLU PHE ILE THR LEU HIS ASN ALA GLY TRP ASP SEQRES 18 A 314 SER GLU SER TYR ILE GLN SER GLU LEU GLU LYS LEU GLY SEQRES 19 A 314 PHE ARG ASP VAL LYS VAL ILE PRO VAL PRO LYS GLU THR SEQRES 20 A 314 SER ILE PRO ILE ASP GLU PHE PHE GLU VAL CYS MET MET SEQRES 21 A 314 ILE ILE PRO TYR LEU LEU PRO LYS PHE TRP THR GLU GLU SEQRES 22 A 314 GLN ARG GLU SER HIS GLU LYS ASP VAL PRO MET VAL LEU SEQRES 23 A 314 ARG GLN TYR LEU GLN ASP THR TYR GLY ALA ASN GLY GLN SEQRES 24 A 314 VAL PRO LEU GLU ALA VAL ALA LEU ILE THR THR GLY LEU SEQRES 25 A 314 LYS PRO SEQRES 1 B 314 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 314 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER GLU SEQRES 3 B 314 LEU MET SER LYS SER ASP TYR ILE GLN ASN MET PHE GLN SEQRES 4 B 314 THR LYS SER PHE VAL ASP ARG TYR LYS TYR THR GLU LYS SEQRES 5 B 314 LEU THR GLY LEU TYR ALA GLN THR LEU VAL ASP TYR SER SEQRES 6 B 314 GLY VAL ALA ASN THR SER GLN LYS PRO LEU VAL VAL LEU SEQRES 7 B 314 ASP ASN ALA CYS GLY ILE GLY ALA VAL SER SER VAL LEU SEQRES 8 B 314 ASN HIS THR LEU GLN ASP GLU ALA LYS LYS THR TRP LYS SEQRES 9 B 314 LEU THR CYS GLY ASP LEU SER GLU GLY MET LEU GLU THR SEQRES 10 B 314 THR LYS ARG ARG LEU GLN ASP GLU GLY TRP VAL ASN ALA SEQRES 11 B 314 GLU THR LYS ILE VAL ASN ALA LEU ASP THR GLY LEU PRO SEQRES 12 B 314 ASP GLY HIS TYR THR HIS VAL PHE VAL ALA PHE GLY PHE SEQRES 13 B 314 GLN SER PHE PRO ASP ALA ASN ALA ALA LEU LYS GLU CYS SEQRES 14 B 314 PHE ARG ILE LEU ALA SER GLY GLY ILE LEU ALA SER SER SEQRES 15 B 314 THR TRP GLN ASN PHE ASN TRP ILE PRO ILE MET LYS ALA SEQRES 16 B 314 ALA ILE GLU THR ILE PRO GLY ASN LEU PRO PHE PRO THR SEQRES 17 B 314 GLN LYS GLU PHE ILE THR LEU HIS ASN ALA GLY TRP ASP SEQRES 18 B 314 SER GLU SER TYR ILE GLN SER GLU LEU GLU LYS LEU GLY SEQRES 19 B 314 PHE ARG ASP VAL LYS VAL ILE PRO VAL PRO LYS GLU THR SEQRES 20 B 314 SER ILE PRO ILE ASP GLU PHE PHE GLU VAL CYS MET MET SEQRES 21 B 314 ILE ILE PRO TYR LEU LEU PRO LYS PHE TRP THR GLU GLU SEQRES 22 B 314 GLN ARG GLU SER HIS GLU LYS ASP VAL PRO MET VAL LEU SEQRES 23 B 314 ARG GLN TYR LEU GLN ASP THR TYR GLY ALA ASN GLY GLN SEQRES 24 B 314 VAL PRO LEU GLU ALA VAL ALA LEU ILE THR THR GLY LEU SEQRES 25 B 314 LYS PRO HET SAH A 301 26 HET SO4 A 302 5 HET ACT A 303 4 HET ACT A 304 4 HET ACT A 305 4 HET SAH B 301 26 HET SO4 B 302 5 HET ACT B 303 4 HET ACT B 304 4 HET ACT B 305 4 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 ACT 6(C2 H3 O2 1-) FORMUL 13 HOH *520(H2 O) HELIX 1 AA1 ASN A 9 GLN A 12 5 4 HELIX 2 AA2 THR A 13 GLY A 28 1 16 HELIX 3 AA3 TYR A 30 GLY A 39 1 10 HELIX 4 AA4 GLY A 58 LEU A 68 1 11 HELIX 5 AA5 GLN A 69 TRP A 76 1 8 HELIX 6 AA6 SER A 84 GLY A 99 1 16 HELIX 7 AA7 ASP A 134 ILE A 145 1 12 HELIX 8 AA8 ASN A 161 GLU A 171 1 11 HELIX 9 AA9 THR A 181 THR A 187 1 7 HELIX 10 AB1 SER A 195 GLY A 207 1 13 HELIX 11 AB2 ILE A 224 TRP A 243 1 20 HELIX 12 AB3 THR A 244 GLU A 252 1 9 HELIX 13 AB4 ASP A 254 GLY A 268 1 15 HELIX 14 AB5 ASN B 9 GLN B 12 5 4 HELIX 15 AB6 THR B 13 GLY B 28 1 16 HELIX 16 AB7 TYR B 30 GLY B 39 1 10 HELIX 17 AB8 VAL B 40 THR B 43 5 4 HELIX 18 AB9 GLY B 58 LEU B 68 1 11 HELIX 19 AC1 GLN B 69 TRP B 76 1 8 HELIX 20 AC2 SER B 84 GLU B 98 1 15 HELIX 21 AC3 ASP B 134 ILE B 145 1 12 HELIX 22 AC4 ASN B 161 THR B 172 1 12 HELIX 23 AC5 THR B 181 THR B 187 1 7 HELIX 24 AC6 SER B 195 GLY B 207 1 13 HELIX 25 AC7 ILE B 224 TRP B 243 1 20 HELIX 26 AC8 THR B 244 GLU B 252 1 9 HELIX 27 AC9 ASP B 254 GLY B 268 1 15 SHEET 1 AA1 7 ALA A 103 ILE A 107 0 SHEET 2 AA1 7 LYS A 77 ASP A 82 1 N CYS A 80 O GLU A 104 SHEET 3 AA1 7 VAL A 49 ASN A 53 1 N VAL A 50 O THR A 79 SHEET 4 AA1 7 TYR A 120 ALA A 126 1 O PHE A 124 N LEU A 51 SHEET 5 AA1 7 LEU A 146 PHE A 160 1 O ALA A 147 N TYR A 120 SHEET 6 AA1 7 GLN A 272 LEU A 285 -1 O THR A 282 N SER A 154 SHEET 7 AA1 7 ARG A 209 PRO A 223 -1 N ILE A 222 O VAL A 273 SHEET 1 AA2 7 ALA B 103 ILE B 107 0 SHEET 2 AA2 7 LYS B 77 ASP B 82 1 N CYS B 80 O GLU B 104 SHEET 3 AA2 7 VAL B 49 ASN B 53 1 N VAL B 50 O THR B 79 SHEET 4 AA2 7 TYR B 120 ALA B 126 1 O PHE B 124 N LEU B 51 SHEET 5 AA2 7 LEU B 146 PHE B 160 1 O ALA B 147 N TYR B 120 SHEET 6 AA2 7 GLN B 272 LEU B 285 -1 O THR B 282 N SER B 154 SHEET 7 AA2 7 ARG B 209 PRO B 223 -1 N ILE B 222 O VAL B 273 CISPEP 1 LYS A 46 PRO A 47 0 -6.24 CISPEP 2 LYS B 46 PRO B 47 0 -5.24 SITE 1 AC1 20 PHE A 11 TYR A 20 THR A 27 ALA A 54 SITE 2 AC1 20 CYS A 55 GLY A 56 ASP A 82 LEU A 83 SITE 3 AC1 20 MET A 87 VAL A 108 ASN A 109 ALA A 110 SITE 4 AC1 20 ALA A 126 PHE A 127 PHE A 132 HOH A 510 SITE 5 AC1 20 HOH A 533 HOH A 557 HOH A 560 HOH B 472 SITE 1 AC2 4 HIS A 189 LYS A 241 HIS B 189 LYS B 241 SITE 1 AC3 3 PHE A 185 HOH A 401 HOH A 576 SITE 1 AC4 3 TRP A 162 ILE A 234 HOH A 405 SITE 1 AC5 4 TYR A 22 ASP A 225 GLU A 226 GLU A 229 SITE 1 AC6 19 HOH A 436 PHE B 11 TYR B 20 THR B 27 SITE 2 AC6 19 ALA B 54 CYS B 55 GLY B 56 ASP B 82 SITE 3 AC6 19 LEU B 83 VAL B 108 ASN B 109 ALA B 110 SITE 4 AC6 19 ALA B 126 PHE B 127 PHE B 132 HOH B 521 SITE 5 AC6 19 HOH B 561 HOH B 585 HOH B 599 SITE 1 AC7 5 PRO B 164 THR B 181 GLN B 182 HOH B 439 SITE 2 AC7 5 HOH B 464 SITE 1 AC8 4 ASP B 210 THR B 283 GLY B 284 LEU B 285 SITE 1 AC9 2 HIS B 189 HOH B 414 SITE 1 AD1 2 PRO B 164 HOH B 423 CRYST1 49.100 109.210 59.940 90.00 112.44 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020367 0.000000 0.008413 0.00000 SCALE2 0.000000 0.009157 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018051 0.00000