HEADER LYASE 28-OCT-15 5EH8 TITLE HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II,CARBONIC ANHYDRASE C,CAC,CARBONIC COMPND 5 ANHYDRASE II,CA-II; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN CARBONIC ANHYDRASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR B.REN REVDAT 3 06-MAR-24 5EH8 1 JRNL REMARK REVDAT 2 23-MAR-16 5EH8 1 JRNL REVDAT 1 09-MAR-16 5EH8 0 JRNL AUTH L.A.WOODS,O.DOLEZAL,B.REN,J.H.RYAN,T.S.PEAT,S.A.POULSEN JRNL TITL NATIVE STATE MASS SPECTROMETRY, SURFACE PLASMON RESONANCE, JRNL TITL 2 AND X-RAY CRYSTALLOGRAPHY CORRELATE STRONGLY AS A FRAGMENT JRNL TITL 3 SCREENING COMBINATION. JRNL REF J.MED.CHEM. V. 59 2192 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 26882437 JRNL DOI 10.1021/ACS.JMEDCHEM.5B01940 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 49144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.7545 - 3.3289 0.99 3489 148 0.1474 0.1575 REMARK 3 2 3.3289 - 2.6424 1.00 3419 146 0.1461 0.1821 REMARK 3 3 2.6424 - 2.3084 1.00 3403 144 0.1445 0.1629 REMARK 3 4 2.3084 - 2.0974 1.00 3397 146 0.1451 0.1620 REMARK 3 5 2.0974 - 1.9470 1.00 3377 154 0.1350 0.1626 REMARK 3 6 1.9470 - 1.8322 1.00 3395 133 0.1407 0.1718 REMARK 3 7 1.8322 - 1.7405 1.00 3360 149 0.1380 0.1600 REMARK 3 8 1.7405 - 1.6647 1.00 3372 140 0.1465 0.1671 REMARK 3 9 1.6647 - 1.6006 1.00 3342 143 0.1535 0.2118 REMARK 3 10 1.6006 - 1.5454 0.99 3354 140 0.1592 0.1613 REMARK 3 11 1.5454 - 1.4971 0.99 3357 141 0.1780 0.2215 REMARK 3 12 1.4971 - 1.4543 0.99 3349 145 0.1868 0.2220 REMARK 3 13 1.4543 - 1.4160 0.99 3308 154 0.2029 0.2396 REMARK 3 14 1.4160 - 1.3814 0.95 3217 122 0.2259 0.2392 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2270 REMARK 3 ANGLE : 1.345 3100 REMARK 3 CHIRALITY : 0.067 319 REMARK 3 PLANARITY : 0.008 410 REMARK 3 DIHEDRAL : 13.759 855 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9374 -1.3140 18.5072 REMARK 3 T TENSOR REMARK 3 T11: 0.0670 T22: 0.1412 REMARK 3 T33: 0.1702 T12: 0.0003 REMARK 3 T13: 0.0007 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.0484 L22: 0.8175 REMARK 3 L33: 1.7395 L12: 0.6795 REMARK 3 L13: -0.7549 L23: -1.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: -0.0669 S13: 0.0419 REMARK 3 S21: -0.0108 S22: -0.0897 S23: -0.3100 REMARK 3 S31: 0.0038 S32: 0.2964 S33: 0.0888 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4503 3.3179 17.4027 REMARK 3 T TENSOR REMARK 3 T11: 0.1170 T22: 0.1296 REMARK 3 T33: 0.1398 T12: 0.0107 REMARK 3 T13: -0.0014 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 1.9141 L22: 1.7380 REMARK 3 L33: 1.5276 L12: -0.8445 REMARK 3 L13: -0.0236 L23: -0.0785 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: 0.0335 S13: 0.2046 REMARK 3 S21: -0.0220 S22: 0.1385 S23: 0.1792 REMARK 3 S31: -0.2699 S32: -0.3326 S33: -0.1785 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4711 -3.5514 18.6944 REMARK 3 T TENSOR REMARK 3 T11: 0.0554 T22: 0.0590 REMARK 3 T33: 0.0692 T12: -0.0169 REMARK 3 T13: -0.0085 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.7433 L22: 1.8603 REMARK 3 L33: 1.5843 L12: -0.2448 REMARK 3 L13: -0.7032 L23: 0.0136 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: -0.0154 S13: 0.0740 REMARK 3 S21: -0.0188 S22: 0.0583 S23: 0.1261 REMARK 3 S31: -0.0294 S32: -0.0284 S33: -0.0620 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2378 3.4875 17.9472 REMARK 3 T TENSOR REMARK 3 T11: 0.0595 T22: 0.0563 REMARK 3 T33: 0.0816 T12: 0.0080 REMARK 3 T13: -0.0089 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 1.4025 L22: 2.0355 REMARK 3 L33: 1.9336 L12: 0.2575 REMARK 3 L13: -0.5635 L23: -0.0311 REMARK 3 S TENSOR REMARK 3 S11: 0.0825 S12: 0.0392 S13: 0.2139 REMARK 3 S21: 0.0634 S22: 0.0093 S23: 0.2688 REMARK 3 S31: -0.0490 S32: -0.0339 S33: -0.0312 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4716 -5.7664 0.0765 REMARK 3 T TENSOR REMARK 3 T11: 0.2398 T22: 0.3181 REMARK 3 T33: 0.1195 T12: -0.0683 REMARK 3 T13: -0.0791 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 5.1778 L22: 3.6510 REMARK 3 L33: 0.5186 L12: 2.6649 REMARK 3 L13: -1.5148 L23: -0.4263 REMARK 3 S TENSOR REMARK 3 S11: -0.3439 S12: 0.7997 S13: -0.1288 REMARK 3 S21: -0.8163 S22: 0.2883 S23: 0.2204 REMARK 3 S31: 0.0987 S32: -0.7729 S33: 0.0185 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3015 -3.5923 11.1045 REMARK 3 T TENSOR REMARK 3 T11: 0.0998 T22: 0.0826 REMARK 3 T33: 0.0507 T12: -0.0130 REMARK 3 T13: -0.0235 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 1.7485 L22: 1.4621 REMARK 3 L33: 1.6279 L12: 0.1687 REMARK 3 L13: -0.6026 L23: 0.0820 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: 0.2630 S13: 0.0744 REMARK 3 S21: -0.2477 S22: 0.0728 S23: 0.0562 REMARK 3 S31: 0.0147 S32: -0.1078 S33: -0.0007 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8192 -6.1844 23.7819 REMARK 3 T TENSOR REMARK 3 T11: 0.0853 T22: 0.0573 REMARK 3 T33: 0.0672 T12: 0.0026 REMARK 3 T13: -0.0154 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 1.9984 L22: 1.7426 REMARK 3 L33: 1.7193 L12: 0.0480 REMARK 3 L13: 0.3019 L23: 0.7041 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: -0.2865 S13: -0.0231 REMARK 3 S21: 0.0765 S22: 0.1032 S23: -0.0775 REMARK 3 S31: -0.0316 S32: 0.2508 S33: -0.1081 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EH8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49161 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 41.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRIS CHLORIDE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.71200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 427 O HOH A 625 1.52 REMARK 500 O HOH A 548 O HOH A 634 1.53 REMARK 500 O HOH A 596 O HOH A 667 1.55 REMARK 500 O HOH A 418 O HOH A 622 1.65 REMARK 500 O HOH A 679 O HOH A 682 1.67 REMARK 500 ND1 HIS A 36 O HOH A 401 1.78 REMARK 500 O HOH A 626 O HOH A 664 1.78 REMARK 500 O HOH A 476 O HOH A 675 1.80 REMARK 500 O HOH A 426 O HOH A 503 1.80 REMARK 500 O HOH A 578 O HOH A 620 1.81 REMARK 500 O HOH A 632 O HOH A 669 1.81 REMARK 500 O HOH A 614 O HOH A 642 1.81 REMARK 500 O HOH A 656 O HOH A 668 1.81 REMARK 500 O HOH A 435 O HOH A 516 1.82 REMARK 500 O HOH A 431 O HOH A 593 1.83 REMARK 500 O HOH A 667 O HOH A 685 1.85 REMARK 500 O HOH A 487 O HOH A 567 1.85 REMARK 500 O HOH A 599 O HOH A 648 1.85 REMARK 500 O HOH A 556 O HOH A 642 1.86 REMARK 500 O HOH A 442 O HOH A 648 1.91 REMARK 500 O HOH A 584 O HOH A 626 1.92 REMARK 500 NH2 ARG A 27 O HOH A 402 1.94 REMARK 500 O HOH A 565 O HOH A 576 1.95 REMARK 500 O HOH A 609 O HOH A 666 1.96 REMARK 500 O HOH A 422 O HOH A 569 1.96 REMARK 500 O HOH A 528 O HOH A 623 1.98 REMARK 500 O HOH A 564 O HOH A 604 1.99 REMARK 500 O HOH A 543 O HOH A 624 1.99 REMARK 500 OD2 ASP A 161 O HOH A 403 2.00 REMARK 500 O HOH A 426 O HOH A 692 2.03 REMARK 500 O VAL A 149 O HOH A 404 2.06 REMARK 500 O HOH A 487 O HOH A 628 2.07 REMARK 500 O HOH A 650 O HOH A 695 2.09 REMARK 500 OE2 GLU A 26 O HOH A 405 2.10 REMARK 500 O HOH A 590 O HOH A 640 2.11 REMARK 500 OG SER A 219 O HOH A 406 2.13 REMARK 500 OD1 ASP A 174 O HOH A 407 2.16 REMARK 500 O HOH A 425 O HOH A 435 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 597 O HOH A 636 2646 1.64 REMARK 500 O HOH A 422 O HOH A 614 1545 1.74 REMARK 500 O HOH A 685 O HOH A 689 2655 1.89 REMARK 500 O HOH A 415 O HOH A 566 2655 1.95 REMARK 500 O HOH A 612 O HOH A 687 2656 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 27 56.09 -140.79 REMARK 500 LYS A 111 -1.59 71.53 REMARK 500 ASN A 243 51.11 -94.25 REMARK 500 LYS A 251 -135.68 50.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 702 DISTANCE = 6.57 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 105.4 REMARK 620 3 HIS A 119 ND1 114.8 98.5 REMARK 620 4 HOH A 425 O 113.6 109.9 113.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5O6 A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EH5 RELATED DB: PDB REMARK 900 RELATED ID: 5EH7 RELATED DB: PDB REMARK 900 RELATED ID: 5EHV RELATED DB: PDB REMARK 900 RELATED ID: 5EHW RELATED DB: PDB REMARK 900 RELATED ID: 5FLO RELATED DB: PDB REMARK 900 RELATED ID: 5FLP RELATED DB: PDB REMARK 900 RELATED ID: 5FLQ RELATED DB: PDB REMARK 900 RELATED ID: 5FLR RELATED DB: PDB REMARK 900 RELATED ID: 5FLS RELATED DB: PDB REMARK 900 RELATED ID: 5FLT RELATED DB: PDB REMARK 900 RELATED ID: 5FNG RELATED DB: PDB REMARK 900 RELATED ID: 5FNH RELATED DB: PDB REMARK 900 RELATED ID: 5FNI RELATED DB: PDB REMARK 900 RELATED ID: 5FNJ RELATED DB: PDB REMARK 900 RELATED ID: 5FNK RELATED DB: PDB REMARK 900 RELATED ID: 5FNM RELATED DB: PDB DBREF 5EH8 A 1 260 UNP P00918 CAH2_HUMAN 1 260 SEQRES 1 A 260 MET SER HIS HIS TRP GLY TYR GLY LYS HIS ASN GLY PRO SEQRES 2 A 260 GLU HIS TRP HIS LYS ASP PHE PRO ILE ALA LYS GLY GLU SEQRES 3 A 260 ARG GLN SER PRO VAL ASP ILE ASP THR HIS THR ALA LYS SEQRES 4 A 260 TYR ASP PRO SER LEU LYS PRO LEU SER VAL SER TYR ASP SEQRES 5 A 260 GLN ALA THR SER LEU ARG ILE LEU ASN ASN GLY HIS ALA SEQRES 6 A 260 PHE ASN VAL GLU PHE ASP ASP SER GLN ASP LYS ALA VAL SEQRES 7 A 260 LEU LYS GLY GLY PRO LEU ASP GLY THR TYR ARG LEU ILE SEQRES 8 A 260 GLN PHE HIS PHE HIS TRP GLY SER LEU ASP GLY GLN GLY SEQRES 9 A 260 SER GLU HIS THR VAL ASP LYS LYS LYS TYR ALA ALA GLU SEQRES 10 A 260 LEU HIS LEU VAL HIS TRP ASN THR LYS TYR GLY ASP PHE SEQRES 11 A 260 GLY LYS ALA VAL GLN GLN PRO ASP GLY LEU ALA VAL LEU SEQRES 12 A 260 GLY ILE PHE LEU LYS VAL GLY SER ALA LYS PRO GLY LEU SEQRES 13 A 260 GLN LYS VAL VAL ASP VAL LEU ASP SER ILE LYS THR LYS SEQRES 14 A 260 GLY LYS SER ALA ASP PHE THR ASN PHE ASP PRO ARG GLY SEQRES 15 A 260 LEU LEU PRO GLU SER LEU ASP TYR TRP THR TYR PRO GLY SEQRES 16 A 260 SER LEU THR THR PRO PRO LEU LEU GLU CYS VAL THR TRP SEQRES 17 A 260 ILE VAL LEU LYS GLU PRO ILE SER VAL SER SER GLU GLN SEQRES 18 A 260 VAL LEU LYS PHE ARG LYS LEU ASN PHE ASN GLY GLU GLY SEQRES 19 A 260 GLU PRO GLU GLU LEU MET VAL ASP ASN TRP ARG PRO ALA SEQRES 20 A 260 GLN PRO LEU LYS ASN ARG GLN ILE LYS ALA SER PHE LYS HET ZN A 301 1 HET FMT A 302 3 HET 5O6 A 303 14 HETNAM ZN ZINC ION HETNAM FMT FORMIC ACID HETNAM 5O6 (~{E})-3-(4-METHOXYPHENYL)BUT-2-ENOIC ACID FORMUL 2 ZN ZN 2+ FORMUL 3 FMT C H2 O2 FORMUL 4 5O6 C11 H12 O3 FORMUL 5 HOH *302(H2 O) HELIX 1 AA1 HIS A 15 ASP A 19 5 5 HELIX 2 AA2 PHE A 20 GLY A 25 5 6 HELIX 3 AA3 LYS A 126 GLY A 128 5 3 HELIX 4 AA4 ASP A 129 VAL A 134 1 6 HELIX 5 AA5 LYS A 153 GLY A 155 5 3 HELIX 6 AA6 LEU A 156 ASP A 161 1 6 HELIX 7 AA7 VAL A 162 LYS A 167 5 6 HELIX 8 AA8 ASP A 179 LEU A 184 5 6 HELIX 9 AA9 SER A 218 ARG A 226 1 9 SHEET 1 AA1 2 ASP A 32 ILE A 33 0 SHEET 2 AA1 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 AA210 LYS A 39 TYR A 40 0 SHEET 2 AA210 LYS A 256 ALA A 257 1 O ALA A 257 N LYS A 39 SHEET 3 AA210 TYR A 190 GLY A 195 -1 N THR A 192 O LYS A 256 SHEET 4 AA210 VAL A 206 LEU A 211 -1 O VAL A 206 N GLY A 195 SHEET 5 AA210 LEU A 140 VAL A 149 1 N GLY A 144 O ILE A 209 SHEET 6 AA210 ALA A 116 ASN A 124 -1 N LEU A 118 O ILE A 145 SHEET 7 AA210 TYR A 88 TRP A 97 -1 N HIS A 94 O HIS A 119 SHEET 8 AA210 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 9 AA210 SER A 56 ASN A 61 -1 N LEU A 57 O GLU A 69 SHEET 10 AA210 SER A 172 ASP A 174 -1 O ALA A 173 N ILE A 59 SHEET 1 AA3 6 LEU A 47 SER A 50 0 SHEET 2 AA3 6 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 AA3 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA3 6 ALA A 116 ASN A 124 -1 O HIS A 119 N HIS A 94 SHEET 5 AA3 6 LEU A 140 VAL A 149 -1 O ILE A 145 N LEU A 118 SHEET 6 AA3 6 ILE A 215 VAL A 217 1 O ILE A 215 N PHE A 146 LINK NE2 HIS A 94 ZN ZN A 301 1555 1555 1.98 LINK NE2 HIS A 96 ZN ZN A 301 1555 1555 2.02 LINK ND1 HIS A 119 ZN ZN A 301 1555 1555 2.03 LINK ZN ZN A 301 O HOH A 425 1555 1555 2.00 CISPEP 1 SER A 29 PRO A 30 0 -0.95 CISPEP 2 SER A 29 PRO A 30 0 3.02 CISPEP 3 PRO A 200 PRO A 201 0 11.09 SITE 1 AC1 4 HIS A 94 HIS A 96 HIS A 119 HOH A 425 SITE 1 AC2 4 LYS A 112 TYR A 114 LYS A 148 HOH A 569 SITE 1 AC3 10 HIS A 94 PHE A 130 LEU A 197 THR A 198 SITE 2 AC3 10 THR A 199 PRO A 201 HOH A 425 HOH A 435 SITE 3 AC3 10 HOH A 457 HOH A 516 CRYST1 42.023 41.424 72.039 90.00 104.21 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023796 0.000000 0.006027 0.00000 SCALE2 0.000000 0.024141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014320 0.00000