HEADER TRANSFERASE 29-OCT-15 5EHW TITLE HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II,CARBONIC ANHYDRASE C,CAC,CARBONIC COMPND 5 ANHYDRASE II,CA-II; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN CARBONIC ANHYDRASE II, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.REN REVDAT 3 06-MAR-24 5EHW 1 JRNL REMARK LINK REVDAT 2 23-MAR-16 5EHW 1 JRNL REVDAT 1 09-MAR-16 5EHW 0 JRNL AUTH L.A.WOODS,O.DOLEZAL,B.REN,J.H.RYAN,T.S.PEAT,S.A.POULSEN JRNL TITL NATIVE STATE MASS SPECTROMETRY, SURFACE PLASMON RESONANCE, JRNL TITL 2 AND X-RAY CRYSTALLOGRAPHY CORRELATE STRONGLY AS A FRAGMENT JRNL TITL 3 SCREENING COMBINATION. JRNL REF J.MED.CHEM. V. 59 2192 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 26882437 JRNL DOI 10.1021/ACS.JMEDCHEM.5B01940 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 49119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8761 - 3.3548 1.00 3490 146 0.1466 0.1626 REMARK 3 2 3.3548 - 2.6630 1.00 3393 145 0.1455 0.1369 REMARK 3 3 2.6630 - 2.3264 1.00 3386 152 0.1484 0.1595 REMARK 3 4 2.3264 - 2.1137 1.00 3378 137 0.1380 0.1786 REMARK 3 5 2.1137 - 1.9622 1.00 3376 151 0.1358 0.1563 REMARK 3 6 1.9622 - 1.8465 1.00 3359 143 0.1351 0.1519 REMARK 3 7 1.8465 - 1.7540 1.00 3364 133 0.1378 0.1567 REMARK 3 8 1.7540 - 1.6777 1.00 3353 144 0.1464 0.1972 REMARK 3 9 1.6777 - 1.6131 1.00 3367 147 0.1556 0.1829 REMARK 3 10 1.6131 - 1.5574 1.00 3356 132 0.1617 0.1887 REMARK 3 11 1.5574 - 1.5087 1.00 3340 153 0.1758 0.1816 REMARK 3 12 1.5087 - 1.4656 1.00 3353 143 0.1874 0.2282 REMARK 3 13 1.4656 - 1.4270 1.00 3376 135 0.2064 0.2246 REMARK 3 14 1.4270 - 1.3922 0.98 3224 143 0.2430 0.2532 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2267 REMARK 3 ANGLE : 1.201 3093 REMARK 3 CHIRALITY : 0.053 318 REMARK 3 PLANARITY : 0.006 409 REMARK 3 DIHEDRAL : 14.480 850 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6366 -2.5192 21.0912 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0826 REMARK 3 T33: 0.0748 T12: 0.0086 REMARK 3 T13: -0.0101 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.5814 L22: 1.1765 REMARK 3 L33: 1.5475 L12: 0.5165 REMARK 3 L13: -0.7021 L23: -0.4308 REMARK 3 S TENSOR REMARK 3 S11: -0.0326 S12: -0.0639 S13: -0.0246 REMARK 3 S21: 0.0291 S22: -0.0137 S23: -0.2007 REMARK 3 S31: 0.0540 S32: 0.2354 S33: 0.0157 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6402 -0.9437 32.6408 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.3181 REMARK 3 T33: 0.1340 T12: 0.0704 REMARK 3 T13: 0.0286 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 0.3275 L22: 1.5731 REMARK 3 L33: 2.9851 L12: -0.6720 REMARK 3 L13: 0.5600 L23: -1.3935 REMARK 3 S TENSOR REMARK 3 S11: -0.3501 S12: -0.4984 S13: -0.0146 REMARK 3 S21: 0.3010 S22: 0.6714 S23: 0.2415 REMARK 3 S31: -0.1337 S32: -0.6976 S33: -0.1708 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0588 1.2362 14.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.0659 T22: 0.0629 REMARK 3 T33: 0.0740 T12: -0.0021 REMARK 3 T13: -0.0100 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.3960 L22: 1.0146 REMARK 3 L33: 1.3193 L12: -0.1918 REMARK 3 L13: -0.6128 L23: 0.1520 REMARK 3 S TENSOR REMARK 3 S11: 0.0647 S12: 0.1481 S13: 0.1649 REMARK 3 S21: -0.0890 S22: 0.0075 S23: 0.0687 REMARK 3 S31: -0.1181 S32: -0.1273 S33: -0.0348 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2808 3.5409 18.0208 REMARK 3 T TENSOR REMARK 3 T11: 0.0436 T22: 0.0405 REMARK 3 T33: 0.0533 T12: 0.0074 REMARK 3 T13: -0.0055 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.0918 L22: 2.0720 REMARK 3 L33: 1.5689 L12: 0.4179 REMARK 3 L13: -0.2869 L23: 0.2425 REMARK 3 S TENSOR REMARK 3 S11: 0.0567 S12: 0.0137 S13: 0.1399 REMARK 3 S21: 0.0394 S22: -0.0303 S23: 0.1208 REMARK 3 S31: -0.0203 S32: -0.0311 S33: -0.0018 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3833 -5.7854 0.1470 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.2161 REMARK 3 T33: 0.0938 T12: -0.0398 REMARK 3 T13: -0.0484 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.9807 L22: 3.3386 REMARK 3 L33: 1.8536 L12: 3.2020 REMARK 3 L13: -1.9912 L23: -1.2602 REMARK 3 S TENSOR REMARK 3 S11: -0.1923 S12: 0.6571 S13: -0.0365 REMARK 3 S21: -0.4596 S22: 0.2456 S23: 0.1365 REMARK 3 S31: 0.2210 S32: -0.5120 S33: -0.0203 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1623 -0.8689 15.0907 REMARK 3 T TENSOR REMARK 3 T11: 0.0557 T22: 0.0594 REMARK 3 T33: 0.0455 T12: 0.0020 REMARK 3 T13: -0.0154 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.1009 L22: 0.7124 REMARK 3 L33: 1.0667 L12: -0.0862 REMARK 3 L13: -0.4335 L23: 0.0416 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: 0.1441 S13: 0.0661 REMARK 3 S21: -0.0692 S22: 0.0138 S23: 0.0575 REMARK 3 S31: 0.0157 S32: -0.1151 S33: -0.0252 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7673 -10.4919 1.0765 REMARK 3 T TENSOR REMARK 3 T11: 0.1673 T22: 0.1447 REMARK 3 T33: 0.0759 T12: -0.0065 REMARK 3 T13: 0.0205 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.3404 L22: 2.0462 REMARK 3 L33: 1.9100 L12: -0.1779 REMARK 3 L13: -0.1599 L23: -0.5031 REMARK 3 S TENSOR REMARK 3 S11: -0.0927 S12: 0.3275 S13: -0.2274 REMARK 3 S21: -0.3810 S22: -0.0448 S23: -0.2063 REMARK 3 S31: 0.1854 S32: 0.0394 S33: 0.1400 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6558 -6.0447 23.9434 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.0222 REMARK 3 T33: 0.0527 T12: -0.0015 REMARK 3 T13: -0.0084 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.5971 L22: 1.2308 REMARK 3 L33: 1.6782 L12: -0.1231 REMARK 3 L13: 0.2201 L23: 0.6653 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: -0.2141 S13: -0.0131 REMARK 3 S21: 0.0727 S22: 0.0722 S23: -0.0589 REMARK 3 S31: 0.0049 S32: 0.1949 S33: -0.0728 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214943. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.32 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49135 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.392 REMARK 200 RESOLUTION RANGE LOW (A) : 41.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRIS-CHLORIDE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.84950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 639 O HOH A 666 1.54 REMARK 500 O HOH A 422 O HOH A 642 1.60 REMARK 500 O HOH A 604 O HOH A 664 1.61 REMARK 500 O HOH A 480 O HOH A 544 1.69 REMARK 500 O HOH A 616 O HOH A 654 1.72 REMARK 500 O HOH A 454 O HOH A 563 1.83 REMARK 500 O HOH A 436 O HOH A 663 1.86 REMARK 500 O HOH A 647 O HOH A 685 1.89 REMARK 500 O HOH A 553 O HOH A 691 1.90 REMARK 500 O HOH A 435 O HOH A 444 1.92 REMARK 500 O HOH A 503 O HOH A 654 1.94 REMARK 500 O HOH A 495 O HOH A 668 1.94 REMARK 500 O HOH A 454 O HOH A 698 1.95 REMARK 500 O HOH A 564 O HOH A 664 1.95 REMARK 500 OE1 GLU A 26 O HOH A 401 1.98 REMARK 500 O HOH A 543 O HOH A 659 2.00 REMARK 500 O HOH A 569 O HOH A 621 2.00 REMARK 500 O HOH A 418 O HOH A 620 2.00 REMARK 500 O HOH A 635 O HOH A 671 2.01 REMARK 500 N LYS A 45 O HOH A 402 2.03 REMARK 500 O HOH A 439 O HOH A 625 2.06 REMARK 500 O HOH A 572 O HOH A 674 2.07 REMARK 500 O HOH A 597 O HOH A 659 2.09 REMARK 500 O HOH A 629 O HOH A 693 2.10 REMARK 500 OE2 GLU A 14 O HOH A 403 2.11 REMARK 500 O HOH A 509 O HOH A 651 2.12 REMARK 500 NH2 ARG A 27 O HOH A 404 2.16 REMARK 500 O HOH A 572 O HOH A 582 2.16 REMARK 500 NH1 ARG A 27 O HOH A 404 2.17 REMARK 500 OG SER A 219 O HOH A 405 2.19 REMARK 500 OD2 ASP A 174 O HOH A 406 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 687 O HOH A 709 2656 1.85 REMARK 500 O HOH A 513 O HOH A 636 1455 1.90 REMARK 500 O HOH A 418 O HOH A 616 1545 1.95 REMARK 500 O HOH A 639 O HOH A 649 2646 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 111 -2.27 72.30 REMARK 500 PHE A 175 55.49 -142.95 REMARK 500 PHE A 175 55.49 -148.07 REMARK 500 ASN A 243 51.25 -92.14 REMARK 500 LYS A 251 -134.65 51.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 304 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 106.6 REMARK 620 3 HIS A 119 ND1 113.7 97.2 REMARK 620 4 5OO A 303 O01 80.2 153.3 103.5 REMARK 620 5 5OO A 303 O13 100.5 95.8 137.8 57.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 113 O REMARK 620 2 LYS A 113 O 10.3 REMARK 620 3 LYS A 126 O 20.3 30.5 REMARK 620 4 HOH A 435 O 14.9 25.2 5.4 REMARK 620 5 HOH A 544 O 17.6 27.7 5.8 5.0 REMARK 620 6 HOH A 593 O 16.8 27.0 4.3 3.1 7.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5OO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EH5 RELATED DB: PDB REMARK 900 RELATED ID: 5EH7 RELATED DB: PDB REMARK 900 RELATED ID: 5EH8 RELATED DB: PDB REMARK 900 RELATED ID: 5EHV RELATED DB: PDB REMARK 900 RELATED ID: 5FLO RELATED DB: PDB REMARK 900 RELATED ID: 5FLP RELATED DB: PDB REMARK 900 RELATED ID: 5FLQ RELATED DB: PDB REMARK 900 RELATED ID: 5FLR RELATED DB: PDB REMARK 900 RELATED ID: 5FLS RELATED DB: PDB REMARK 900 RELATED ID: 5FLT RELATED DB: PDB REMARK 900 RELATED ID: 5FNG RELATED DB: PDB REMARK 900 RELATED ID: 5FNH RELATED DB: PDB REMARK 900 RELATED ID: 5FNI RELATED DB: PDB REMARK 900 RELATED ID: 5FNJ RELATED DB: PDB REMARK 900 RELATED ID: 5FNK RELATED DB: PDB REMARK 900 RELATED ID: 5FNM RELATED DB: PDB DBREF 5EHW A 1 260 UNP P00918 CAH2_HUMAN 1 260 SEQRES 1 A 260 MET SER HIS HIS TRP GLY TYR GLY LYS HIS ASN GLY PRO SEQRES 2 A 260 GLU HIS TRP HIS LYS ASP PHE PRO ILE ALA LYS GLY GLU SEQRES 3 A 260 ARG GLN SER PRO VAL ASP ILE ASP THR HIS THR ALA LYS SEQRES 4 A 260 TYR ASP PRO SER LEU LYS PRO LEU SER VAL SER TYR ASP SEQRES 5 A 260 GLN ALA THR SER LEU ARG ILE LEU ASN ASN GLY HIS ALA SEQRES 6 A 260 PHE ASN VAL GLU PHE ASP ASP SER GLN ASP LYS ALA VAL SEQRES 7 A 260 LEU LYS GLY GLY PRO LEU ASP GLY THR TYR ARG LEU ILE SEQRES 8 A 260 GLN PHE HIS PHE HIS TRP GLY SER LEU ASP GLY GLN GLY SEQRES 9 A 260 SER GLU HIS THR VAL ASP LYS LYS LYS TYR ALA ALA GLU SEQRES 10 A 260 LEU HIS LEU VAL HIS TRP ASN THR LYS TYR GLY ASP PHE SEQRES 11 A 260 GLY LYS ALA VAL GLN GLN PRO ASP GLY LEU ALA VAL LEU SEQRES 12 A 260 GLY ILE PHE LEU LYS VAL GLY SER ALA LYS PRO GLY LEU SEQRES 13 A 260 GLN LYS VAL VAL ASP VAL LEU ASP SER ILE LYS THR LYS SEQRES 14 A 260 GLY LYS SER ALA ASP PHE THR ASN PHE ASP PRO ARG GLY SEQRES 15 A 260 LEU LEU PRO GLU SER LEU ASP TYR TRP THR TYR PRO GLY SEQRES 16 A 260 SER LEU THR THR PRO PRO LEU LEU GLU CYS VAL THR TRP SEQRES 17 A 260 ILE VAL LEU LYS GLU PRO ILE SER VAL SER SER GLU GLN SEQRES 18 A 260 VAL LEU LYS PHE ARG LYS LEU ASN PHE ASN GLY GLU GLY SEQRES 19 A 260 GLU PRO GLU GLU LEU MET VAL ASP ASN TRP ARG PRO ALA SEQRES 20 A 260 GLN PRO LEU LYS ASN ARG GLN ILE LYS ALA SER PHE LYS HET GOL A 301 6 HET FMT A 302 3 HET 5OO A 303 13 HET ZN A 304 1 HET NA A 305 1 HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM 5OO (~{E})-3-(2,4-DICHLOROPHENYL)PROP-2-ENOIC ACID HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 FMT C H2 O2 FORMUL 4 5OO C9 H6 CL2 O2 FORMUL 5 ZN ZN 2+ FORMUL 6 NA NA 1+ FORMUL 7 HOH *312(H2 O) HELIX 1 AA1 HIS A 15 ASP A 19 5 5 HELIX 2 AA2 PHE A 20 GLY A 25 5 6 HELIX 3 AA3 LYS A 126 GLY A 128 5 3 HELIX 4 AA4 ASP A 129 VAL A 134 1 6 HELIX 5 AA5 LYS A 153 GLY A 155 5 3 HELIX 6 AA6 LEU A 156 LEU A 163 1 8 HELIX 7 AA7 ASP A 164 LYS A 167 5 4 HELIX 8 AA8 ASP A 179 LEU A 184 5 6 HELIX 9 AA9 SER A 218 ARG A 226 1 9 SHEET 1 AA1 2 ASP A 32 ILE A 33 0 SHEET 2 AA1 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 AA210 LYS A 39 TYR A 40 0 SHEET 2 AA210 LYS A 256 ALA A 257 1 O ALA A 257 N LYS A 39 SHEET 3 AA210 TYR A 190 GLY A 195 -1 N THR A 192 O LYS A 256 SHEET 4 AA210 VAL A 206 LEU A 211 -1 O VAL A 206 N GLY A 195 SHEET 5 AA210 LEU A 140 VAL A 149 1 N GLY A 144 O LEU A 211 SHEET 6 AA210 ALA A 116 ASN A 124 -1 N LEU A 118 O ILE A 145 SHEET 7 AA210 TYR A 88 TRP A 97 -1 N HIS A 94 O HIS A 119 SHEET 8 AA210 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 9 AA210 SER A 56 ASN A 61 -1 N LEU A 57 O GLU A 69 SHEET 10 AA210 SER A 172 ASP A 174 -1 O ALA A 173 N ILE A 59 SHEET 1 AA3 6 LEU A 47 SER A 50 0 SHEET 2 AA3 6 VAL A 78 GLY A 81 -1 O LYS A 80 N SER A 48 SHEET 3 AA3 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA3 6 ALA A 116 ASN A 124 -1 O HIS A 119 N HIS A 94 SHEET 5 AA3 6 LEU A 140 VAL A 149 -1 O ILE A 145 N LEU A 118 SHEET 6 AA3 6 ILE A 215 VAL A 217 1 O ILE A 215 N PHE A 146 LINK NE2 HIS A 94 ZN ZN A 304 1555 1555 2.02 LINK NE2 HIS A 96 ZN ZN A 304 1555 1555 2.04 LINK O ALYS A 113 NA NA A 305 1555 1545 2.86 LINK O BLYS A 113 NA NA A 305 1555 1545 3.02 LINK ND1 HIS A 119 ZN ZN A 304 1555 1555 2.07 LINK O LYS A 126 NA NA A 305 1555 1555 2.90 LINK O01 5OO A 303 ZN ZN A 304 1555 1555 2.49 LINK O13 5OO A 303 ZN ZN A 304 1555 1555 1.97 LINK NA NA A 305 O HOH A 435 1555 1565 2.27 LINK NA NA A 305 O HOH A 544 1555 1565 2.51 LINK NA NA A 305 O HOH A 593 1555 1565 3.13 CISPEP 1 SER A 29 PRO A 30 0 -1.01 CISPEP 2 SER A 29 PRO A 30 0 3.28 CISPEP 3 PRO A 200 PRO A 201 0 10.42 SITE 1 AC1 6 ASN A 62 HIS A 64 ASN A 67 GLN A 92 SITE 2 AC1 6 HOH A 448 HOH A 467 SITE 1 AC2 3 TYR A 114 LYS A 148 HOH A 620 SITE 1 AC3 12 HIS A 94 HIS A 96 HIS A 119 VAL A 121 SITE 2 AC3 12 PHE A 130 LEU A 197 THR A 198 THR A 199 SITE 3 AC3 12 PRO A 200 PRO A 201 ZN A 304 HOH A 430 SITE 1 AC4 4 HIS A 94 HIS A 96 HIS A 119 5OO A 303 SITE 1 AC5 7 LYS A 112 LYS A 113 LYS A 126 TYR A 127 SITE 2 AC5 7 GLY A 128 HOH A 435 HOH A 544 CRYST1 42.280 41.699 72.344 90.00 103.95 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023652 0.000000 0.005877 0.00000 SCALE2 0.000000 0.023981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014243 0.00000