HEADER VIRAL PROTEIN 30-OCT-15 5EJ0 TITLE THE VACCINIA VIRUS H3 ENVELOPE PROTEIN, A MAJOR TARGET OF NEUTRALIZING TITLE 2 ANTIBODIES, EXHIBITS A GLYCOSYLTRANSFERASE FOLD AND BINDS UDP-GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE PROTEIN H3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AG35,VIRION ENVELOPE PROTEIN P35; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS (STRAIN WESTERN RESERVE); SOURCE 3 ORGANISM_COMMON: VACV; SOURCE 4 ORGANISM_TAXID: 10254; SOURCE 5 STRAIN: WESTERN RESERVE; SOURCE 6 GENE: VACWR101, H3L; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNAN KEYWDS H3, VACCINIA VIRUS, POXVIRUS, GLYCOSYL TRANSFERASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.SINGH,A.G.GITTIS,R.K.GITTI,S.A.OSTAZESKY,H.P.SU,D.N.GARBOCZI REVDAT 2 11-MAY-16 5EJ0 1 JRNL REVDAT 1 16-MAR-16 5EJ0 0 JRNL AUTH K.SINGH,A.G.GITTIS,R.K.GITTI,S.A.OSTAZESKI,H.P.SU, JRNL AUTH 2 D.N.GARBOCZI JRNL TITL THE VACCINIA VIRUS H3 ENVELOPE PROTEIN, A MAJOR TARGET OF JRNL TITL 2 NEUTRALIZING ANTIBODIES, EXHIBITS A GLYCOSYLTRANSFERASE FOLD JRNL TITL 3 AND BINDS UDP-GLUCOSE. JRNL REF J.VIROL. V. 90 5020 2016 JRNL REFN ESSN 1098-5514 JRNL PMID 26937025 JRNL DOI 10.1128/JVI.02933-15 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2321 - 4.3492 0.99 1749 151 0.1984 0.2274 REMARK 3 2 4.3492 - 3.4524 1.00 1660 143 0.1655 0.2012 REMARK 3 3 3.4524 - 3.0160 1.00 1621 149 0.1870 0.2678 REMARK 3 4 3.0160 - 2.7403 1.00 1632 139 0.2018 0.2406 REMARK 3 5 2.7403 - 2.5439 1.00 1636 139 0.2099 0.2292 REMARK 3 6 2.5439 - 2.3939 1.00 1624 115 0.1965 0.2492 REMARK 3 7 2.3939 - 2.2740 1.00 1654 122 0.1940 0.2229 REMARK 3 8 2.2740 - 2.1750 1.00 1591 149 0.2015 0.2285 REMARK 3 9 2.1750 - 2.0913 1.00 1601 127 0.2151 0.2554 REMARK 3 10 2.0913 - 2.0191 1.00 1602 125 0.2223 0.2954 REMARK 3 11 2.0191 - 1.9560 1.00 1585 153 0.2608 0.3277 REMARK 3 12 1.9560 - 1.9001 1.00 1590 156 0.2871 0.3116 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1765 REMARK 3 ANGLE : 1.089 2340 REMARK 3 CHIRALITY : 0.040 264 REMARK 3 PLANARITY : 0.005 291 REMARK 3 DIHEDRAL : 12.369 611 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000214995. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.790 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CITRIC ACID, 10-20% PEG 6000, REMARK 280 5% 1,3-PROPANEDIOL AND MIXTURE OF LOW MOLECULAR MASS ALCOHOLS, REMARK 280 PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.18000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.39500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.39500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 35 REMARK 465 ASP A 36 REMARK 465 VAL A 37 REMARK 465 LYS A 38 REMARK 465 ASP A 39 REMARK 465 ASN A 40 REMARK 465 GLU A 41 REMARK 465 VAL A 42 REMARK 465 MET A 43 REMARK 465 PRO A 44 REMARK 465 GLU A 45 REMARK 465 LYS A 46 REMARK 465 ARG A 47 REMARK 465 ASN A 48 REMARK 465 VAL A 49 REMARK 465 VAL A 50 REMARK 465 VAL A 51 REMARK 465 VAL A 52 REMARK 465 LYS A 53 REMARK 465 ASP A 54 REMARK 465 ASP A 55 REMARK 465 PRO A 56 REMARK 465 ASP A 57 REMARK 465 HIS A 58 REMARK 465 TYR A 59 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 28 CG ND1 CD2 CE1 NE2 REMARK 470 PHE A 34 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 ILE A 72 CB CG1 CG2 CD1 REMARK 470 ARG A 73 CB CG CD NE CZ NH1 NH2 REMARK 470 ASN A 74 CB CG OD1 ND2 REMARK 470 ASP A 75 CB CG OD1 OD2 REMARK 470 ASP A 76 CB CG OD1 OD2 REMARK 470 LYS A 77 CB CG CD CE NZ REMARK 470 PHE A 85 CG CD1 CD2 CE1 CE2 CZ REMARK 470 CYS A 86 CB SG REMARK 470 ASN A 87 CB CG OD1 ND2 REMARK 470 THR A 88 OG1 CG2 REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 ARG A 96 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 141 CD CE NZ REMARK 470 GLU A 238 CG CD OE1 OE2 REMARK 470 ASP A 240 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C5 PG0 A 704 C1 POL A 708 1.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 27 -155.75 -144.89 REMARK 500 GLN A 32 140.85 -172.65 REMARK 500 ILE A 72 -90.64 -39.96 REMARK 500 ASP A 75 44.96 -153.62 REMARK 500 PHE A 85 -104.95 -93.61 REMARK 500 CYS A 86 -134.03 68.19 REMARK 500 ASN A 87 -132.06 -72.48 REMARK 500 LYS A 170 -109.56 38.85 REMARK 500 ASP A 182 31.82 -142.40 REMARK 500 SER A 209 -64.00 -125.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 725 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 125 OE1 REMARK 620 2 ASP A 127 OD1 102.0 REMARK 620 3 SER A 186 OG 108.5 114.0 REMARK 620 4 PDO A 710 O1 95.0 136.8 97.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DHL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG0 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG0 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG0 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG0 A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POL A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PDO A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PDO A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 713 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 714 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 716 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 717 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 718 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 725 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS HAVE INDICATED THAT THE SEQUENCE IN THE UNPROT ENTRY P07240 REMARK 999 IS INCORRECT DBREF 5EJ0 A 4 240 UNP P07240 H3_VACCW 4 240 SEQADV 5EJ0 ALA A 195 UNP P07240 GLU 195 SEE REMARK 999 SEQRES 1 A 237 ALA LYS THR PRO VAL ILE VAL VAL PRO VAL ILE ASP ARG SEQRES 2 A 237 LEU PRO SER GLU THR PHE PRO ASN VAL HIS GLU HIS ILE SEQRES 3 A 237 ASN ASP GLN LYS PHE ASP ASP VAL LYS ASP ASN GLU VAL SEQRES 4 A 237 MET PRO GLU LYS ARG ASN VAL VAL VAL VAL LYS ASP ASP SEQRES 5 A 237 PRO ASP HIS TYR LYS ASP TYR ALA PHE ILE GLN TRP THR SEQRES 6 A 237 GLY GLY ASN ILE ARG ASN ASP ASP LYS TYR THR HIS PHE SEQRES 7 A 237 PHE SER GLY PHE CYS ASN THR MET CYS THR GLU GLU THR SEQRES 8 A 237 LYS ARG ASN ILE ALA ARG HIS LEU ALA LEU TRP ASP SER SEQRES 9 A 237 ASN PHE PHE THR GLU LEU GLU ASN LYS LYS VAL GLU TYR SEQRES 10 A 237 VAL VAL ILE VAL GLU ASN ASP ASN VAL ILE GLU ASP ILE SEQRES 11 A 237 THR PHE LEU ARG PRO VAL LEU LYS ALA MET HIS ASP LYS SEQRES 12 A 237 LYS ILE ASP ILE LEU GLN MET ARG GLU ILE ILE THR GLY SEQRES 13 A 237 ASN LYS VAL LYS THR GLU LEU VAL MET ASP LYS ASN HIS SEQRES 14 A 237 ALA ILE PHE THR TYR THR GLY GLY TYR ASP VAL SER LEU SEQRES 15 A 237 SER ALA TYR ILE ILE ARG VAL THR THR ALA LEU ASN ILE SEQRES 16 A 237 VAL ASP GLU ILE ILE LYS SER GLY GLY LEU SER SER GLY SEQRES 17 A 237 PHE TYR PHE GLU ILE ALA ARG ILE GLU ASN GLU MET LYS SEQRES 18 A 237 ILE ASN ARG GLN ILE LEU ASP ASN ALA ALA LYS TYR VAL SEQRES 19 A 237 GLU HIS ASP HET DHL A 701 5 HET PG0 A 702 8 HET PG0 A 703 8 HET PG0 A 704 8 HET PG0 A 705 8 HET GOL A 706 6 HET GOL A 707 6 HET POL A 708 4 HET PDO A 709 5 HET PDO A 710 5 HET EDO A 711 4 HET EDO A 712 4 HET EDO A 713 4 HET EDO A 714 4 HET EDO A 715 4 HET EOH A 716 3 HET EOH A 717 3 HET EOH A 718 3 HET MOH A 719 2 HET MOH A 720 2 HET MOH A 721 2 HET MOH A 722 2 HET MOH A 723 2 HET MOH A 724 2 HET MG A 725 1 HETNAM DHL 2-AMINO-ETHANETHIOL HETNAM PG0 2-(2-METHOXYETHOXY)ETHANOL HETNAM GOL GLYCEROL HETNAM POL N-PROPANOL HETNAM PDO 1,3-PROPANDIOL HETNAM EDO 1,2-ETHANEDIOL HETNAM EOH ETHANOL HETNAM MOH METHANOL HETNAM MG MAGNESIUM ION HETSYN DHL 2,3-DESHYDROLANTHIONINE HETSYN PG0 PEG 6000 HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN POL 1-PROPONOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 DHL C2 H7 N S FORMUL 3 PG0 4(C5 H12 O3) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 POL C3 H8 O FORMUL 10 PDO 2(C3 H8 O2) FORMUL 12 EDO 5(C2 H6 O2) FORMUL 17 EOH 3(C2 H6 O) FORMUL 20 MOH 6(C H4 O) FORMUL 26 MG MG 2+ FORMUL 27 HOH *91(H2 O) HELIX 1 AA1 LEU A 17 THR A 21 5 5 HELIX 2 AA2 TYR A 78 PHE A 82 5 5 HELIX 3 AA3 THR A 91 ASP A 106 1 16 HELIX 4 AA4 SER A 107 LYS A 116 1 10 HELIX 5 AA5 ASP A 132 THR A 134 5 3 HELIX 6 AA6 PHE A 135 LYS A 146 1 12 HELIX 7 AA7 VAL A 192 SER A 205 1 14 HELIX 8 AA8 GLY A 211 MET A 223 1 13 HELIX 9 AA9 ASN A 232 TYR A 236 5 5 SHEET 1 AA1 9 ASN A 30 GLN A 32 0 SHEET 2 AA1 9 TYR A 62 TRP A 67 1 O GLN A 66 N ASN A 30 SHEET 3 AA1 9 THR A 6 VAL A 11 1 N VAL A 10 O ILE A 65 SHEET 4 AA1 9 TYR A 120 GLU A 125 1 O VAL A 122 N ILE A 9 SHEET 5 AA1 9 ALA A 187 ARG A 191 -1 O TYR A 188 N ILE A 123 SHEET 6 AA1 9 ILE A 150 GLN A 152 -1 N LEU A 151 O ILE A 189 SHEET 7 AA1 9 ARG A 227 LEU A 230 1 O GLN A 228 N GLN A 152 SHEET 8 AA1 9 HIS A 172 THR A 178 -1 N TYR A 177 O ILE A 229 SHEET 9 AA1 9 THR A 164 ASP A 169 -1 N LEU A 166 O ILE A 174 SHEET 1 AA2 2 ASN A 128 VAL A 129 0 SHEET 2 AA2 2 GLU A 238 HIS A 239 -1 O GLU A 238 N VAL A 129 SSBOND 1 CYS A 90 DHL A 701 1555 1555 2.26 LINK OE1 GLU A 125 MG MG A 725 1555 1555 2.62 LINK OD1 ASP A 127 MG MG A 725 1555 1555 2.65 LINK OG SER A 186 MG MG A 725 1555 1555 2.59 LINK O1 PDO A 710 MG MG A 725 1555 1555 2.92 SITE 1 AC1 7 SER A 83 GLY A 84 PHE A 85 MET A 89 SITE 2 AC1 7 CYS A 90 LYS A 95 SER A 209 SITE 1 AC2 6 GLY A 211 PHE A 212 TYR A 213 PHE A 214 SITE 2 AC2 6 HOH A 802 HOH A 886 SITE 1 AC3 6 PRO A 12 ARG A 16 GLN A 66 THR A 68 SITE 2 AC3 6 ASN A 71 HOH A 817 SITE 1 AC4 8 GLU A 201 LYS A 204 GLY A 211 PHE A 214 SITE 2 AC4 8 MET A 223 POL A 708 HOH A 802 HOH A 853 SITE 1 AC5 9 ASP A 149 THR A 194 SER A 210 MET A 223 SITE 2 AC5 9 LYS A 224 ILE A 225 GOL A 706 POL A 708 SITE 3 AC5 9 HOH A 838 SITE 1 AC6 7 CYS A 86 ARG A 191 THR A 193 SER A 209 SITE 2 AC6 7 SER A 210 PG0 A 705 HOH A 866 SITE 1 AC7 8 TRP A 105 ILE A 150 GLN A 152 SER A 184 SITE 2 AC7 8 LEU A 185 TYR A 188 GLU A 220 ARG A 227 SITE 1 AC8 5 SER A 210 MET A 223 PG0 A 704 PG0 A 705 SITE 2 AC8 5 HOH A 838 SITE 1 AC9 3 ASN A 221 GLU A 222 LYS A 224 SITE 1 AD1 8 ASN A 97 GLU A 125 ARG A 154 SER A 186 SITE 2 AD1 8 HIS A 239 MG A 725 HOH A 832 HOH A 845 SITE 1 AD2 7 ILE A 157 GLY A 180 TYR A 181 ILE A 203 SITE 2 AD2 7 LYS A 204 HOH A 831 HOH A 862 SITE 1 AD3 5 ASN A 24 GLU A 131 ASP A 132 HOH A 812 SITE 2 AD3 5 HOH A 824 SITE 1 AD4 3 GLY A 84 GLY A 206 HOH A 801 SITE 1 AD5 8 TYR A 181 ASP A 182 VAL A 183 LYS A 204 SITE 2 AD5 8 TYR A 213 PHE A 214 HOH A 802 HOH A 867 SITE 1 AD6 2 ASP A 61 HOH A 818 SITE 1 AD7 6 THR A 178 ILE A 225 ASN A 226 ARG A 227 SITE 2 AD7 6 EOH A 718 HOH A 803 SITE 1 AD8 5 LYS A 33 THR A 68 GLY A 69 ASN A 74 SITE 2 AD8 5 TYR A 78 SITE 1 AD9 8 GLY A 180 ALA A 217 GLU A 220 ASN A 221 SITE 2 AD9 8 ARG A 227 EOH A 716 HOH A 803 HOH A 839 SITE 1 AE1 5 GLU A 125 ASP A 127 SER A 186 HIS A 239 SITE 2 AE1 5 PDO A 710 CRYST1 42.360 54.790 111.990 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023607 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018252 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008929 0.00000