HEADER DNA BINDING PROTEIN 02-NOV-15 5EJL TITLE MRKH, A NOVEL C-DI-GMP DEPENDENCE TRANSCRIPTION REGULATORY FACTOR. COMPND MOL_ID: 1; COMPND 2 MOLECULE: KLEBSIELLA PNEUMONIAE GENOME ASSEMBLY NOVST; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-228; COMPND 5 SYNONYM: KLEBSIELLA PNEUMONIAE GENOME ASSEMBLY ST15,PILUS ASSEMBLY COMPND 6 PROTEIN PILZ,PUTATIVE GLYCOSYLTRANSFERASE,TYPE 3 FIMBRIAE COMPND 7 TRANSCRIPTION ACTIVATOR,TYPE IV PILUS ASSEMBLY PILZ; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: MRKH, AB187_02280, ABY63_13825, KPOL2_01311, KPST15NDM1_03054, SOURCE 5 PMK1_00755, SE02_15980, SK98_03603, SL05_03385, SL19_03056, SOURCE 6 SL24_03356, SL48_03379, SL56_02701, SL57_03341, SL69_00334, SOURCE 7 SL71_01892, SL72_01879, SL84_03450, SL85_03311, SM12_03647, SOURCE 8 SM17_03206, SM19_03245, SM22_01812, SM40_03226, SM53_03378, SOURCE 9 SM56_03389, SM59_03130, SM60_03292, SM61_03450, SM63_04027, SOURCE 10 SM64_03419, SM65_01990, SM67_03796, SM68_03567, SM69_03407, SOURCE 11 SM70_03107, SM76_03442, SM78_02985, SM80_04811, SM81_03133, SOURCE 12 SM82_03289, SM83_03401, SM84_02805, SM86_03547, SM88_03405, SOURCE 13 SM90_03491, SM91_03378, SM92_03536, SM94_03313, SM95_03513, SOURCE 14 SM96_03441, SM97_03673, SM98_03236, SM99_03225, SN02_03392; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS COMPLEX, C-DI-GMP, PILZ DOMAIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.WANG,D.ZHU,L.GU REVDAT 2 20-MAR-24 5EJL 1 REMARK HETSYN REVDAT 1 19-OCT-16 5EJL 0 JRNL AUTH F.WANG,Q.HE,K.SU,F.GAO,Y.HUANG,Z.LIN,D.ZHU,L.GU JRNL TITL THE PILZ DOMAIN OF MRKH REPRESENTS A NOVEL DNA BINDING MOTIF JRNL REF PROTEIN CELL V. 7 766 2016 JRNL REFN ESSN 1674-8018 JRNL PMID 27650952 JRNL DOI 10.1007/S13238-016-0317-Y REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5452 - 4.3984 1.00 2887 145 0.2127 0.2678 REMARK 3 2 4.3984 - 3.4920 1.00 2723 139 0.1951 0.2321 REMARK 3 3 3.4920 - 3.0508 1.00 2682 130 0.2230 0.2532 REMARK 3 4 3.0508 - 2.7720 1.00 2652 159 0.2325 0.2846 REMARK 3 5 2.7720 - 2.5733 1.00 2632 154 0.2322 0.2641 REMARK 3 6 2.5733 - 2.4216 1.00 2617 137 0.2331 0.2858 REMARK 3 7 2.4216 - 2.3004 1.00 2620 149 0.2491 0.2974 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2090 REMARK 3 ANGLE : 0.975 2828 REMARK 3 CHIRALITY : 0.058 309 REMARK 3 PLANARITY : 0.005 344 REMARK 3 DIHEDRAL : 18.100 1227 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000213645. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : ZR FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 31.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM CITRATE REMARK 280 TRIBASIC DIHYDRATE, LITHIUM SULFATE MONOHYDRATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.72850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.27800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.27800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.86425 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.27800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.27800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 134.59275 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.27800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.27800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.86425 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.27800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.27800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 134.59275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.72850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A 85 REMARK 465 GLY A 86 REMARK 465 VAL A 87 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A -2 O HOH A 401 2.09 REMARK 500 OH TYR A 132 O HOH A 402 2.14 REMARK 500 OE1 GLU A 174 O HOH A 403 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 38 -158.23 -142.14 REMARK 500 ASP A 44 -157.66 -129.27 REMARK 500 PRO A 57 -173.79 -64.29 REMARK 500 ALA A 170 -128.07 57.12 REMARK 500 ASN A 191 -168.32 -79.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 DBREF 5EJL A 1 228 UNP G3FT00 G3FT00_KLEPN 1 228 SEQADV 5EJL MET A -19 UNP G3FT00 INITIATING METHIONINE SEQADV 5EJL GLY A -18 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL SER A -17 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL SER A -16 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -15 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -14 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -13 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -12 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -11 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A -10 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL SER A -9 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL SER A -8 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL GLY A -7 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL LEU A -6 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL VAL A -5 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL PRO A -4 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL ARG A -3 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL GLY A -2 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL SER A -1 UNP G3FT00 EXPRESSION TAG SEQADV 5EJL HIS A 0 UNP G3FT00 EXPRESSION TAG SEQRES 1 A 248 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 248 LEU VAL PRO ARG GLY SER HIS MET THR GLU GLY THR ILE SEQRES 3 A 248 LYS THR SER LYS TYR GLU ILE ILE ALA ILE PHE ARG GLU SEQRES 4 A 248 GLU LEU ARG LYS ARG THR GLU ILE GLU ILE PHE PHE ASN SEQRES 5 A 248 ASN THR SER ILE ILE THR GLN LEU THR ARG VAL ASP PHE SEQRES 6 A 248 ALA GLU PHE HIS ILE GLN THR HIS ARG LYS ILE PRO SER SEQRES 7 A 248 GLY HIS LYS ILE ARG PHE LEU LEU HIS SER ASP SER GLY SEQRES 8 A 248 LYS ILE GLU PHE ASN ALA ALA LEU THR LYS HIS ASP ASN SEQRES 9 A 248 SER GLY VAL ASP LYS GLY ILE ARG TYR ALA PHE SER LEU SEQRES 10 A 248 PRO GLU CYS LEU GLN VAL VAL GLN ARG ARG ARG ASP PRO SEQRES 11 A 248 ARG PHE ARG LEU ARG HIS GLU HIS ASP PHE TYR CYS ARG SEQRES 12 A 248 GLY ARG HIS LYS ASN GLY GLU ASN TYR LEU PHE ASP ILE SEQRES 13 A 248 LYS ASP ILE SER ASP GLY GLY CYS ALA LEU MET THR LYS SEQRES 14 A 248 THR PRO ASN LEU LYS PHE LEU SER HIS ASN ALA LEU LEU SEQRES 15 A 248 LYS ASN ALA VAL LEU MET LEU ALA GLU TYR GLY GLU ILE SEQRES 16 A 248 THR ILE ASP LEU VAL VAL LYS ASN VAL ILE VAL ILE THR SEQRES 17 A 248 LEU ASP ASN ALA ASN GLU GLU SER GLU SER TYR TYR GLN SEQRES 18 A 248 ILE SER CYS GLN PHE LYS PHE ARG HIS LEU ASP ASP GLN SEQRES 19 A 248 ARG ARG ILE GLU LYS ILE LEU LEU ASP LEU ILE LEU GLU SEQRES 20 A 248 ALA HET C2E A 301 46 HET C2E A 302 46 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 C2E 2(C20 H24 N10 O14 P2) FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 10 HOH *88(H2 O) HELIX 1 AA1 SER A 9 LYS A 23 1 15 HELIX 2 AA2 ASN A 152 LEU A 156 5 5 HELIX 3 AA3 ALA A 170 TYR A 172 5 3 HELIX 4 AA4 HIS A 210 ALA A 228 1 19 SHEET 1 AA1 6 THR A 2 LYS A 7 0 SHEET 2 AA1 6 LEU A 101 GLN A 105 -1 O GLN A 105 N THR A 2 SHEET 3 AA1 6 GLY A 71 ALA A 77 -1 N GLU A 74 O GLN A 102 SHEET 4 AA1 6 ILE A 62 SER A 68 -1 N LEU A 66 O ILE A 73 SHEET 5 AA1 6 GLU A 26 PHE A 31 -1 N GLU A 26 O HIS A 67 SHEET 6 AA1 6 THR A 34 GLN A 39 -1 O ILE A 36 N ILE A 29 SHEET 1 AA2 4 ARG A 42 VAL A 43 0 SHEET 2 AA2 4 GLU A 47 THR A 52 -1 O HIS A 49 N ARG A 42 SHEET 3 AA2 4 ILE A 91 SER A 96 -1 O PHE A 95 N PHE A 48 SHEET 4 AA2 4 LEU A 79 ASP A 83 -1 N THR A 80 O ALA A 94 SHEET 1 AA3 8 PHE A 112 ARG A 113 0 SHEET 2 AA3 8 ASN A 131 ILE A 139 -1 O ILE A 139 N PHE A 112 SHEET 3 AA3 8 GLY A 143 THR A 148 -1 O MET A 147 N ASP A 135 SHEET 4 AA3 8 SER A 196 LYS A 207 -1 O CYS A 204 N CYS A 144 SHEET 5 AA3 8 GLU A 174 ASP A 190 -1 N LYS A 182 O SER A 203 SHEET 6 AA3 8 LEU A 161 MET A 168 -1 N LEU A 167 O ILE A 175 SHEET 7 AA3 8 TYR A 121 ARG A 125 -1 N TYR A 121 O MET A 168 SHEET 8 AA3 8 ASN A 131 ILE A 139 -1 O PHE A 134 N CYS A 122 CISPEP 1 ALA A 192 ASN A 193 0 -6.29 SITE 1 AC1 23 ARG A 106 ARG A 107 ARG A 108 ARG A 111 SITE 2 AC1 23 ASP A 138 ILE A 139 SER A 140 GLY A 142 SITE 3 AC1 23 GLY A 143 CYS A 144 ALA A 145 LYS A 182 SITE 4 AC1 23 SER A 203 CYS A 204 GLN A 205 C2E A 302 SITE 5 AC1 23 SO4 A 303 EDO A 307 HOH A 405 HOH A 415 SITE 6 AC1 23 HOH A 428 HOH A 430 HOH A 436 SITE 1 AC2 18 LEU A 65 HIS A 67 GLY A 71 LYS A 72 SITE 2 AC2 18 GLN A 105 ARG A 106 ARG A 107 ARG A 111 SITE 3 AC2 18 LYS A 182 ASN A 183 ILE A 185 GLN A 201 SITE 4 AC2 18 C2E A 301 HOH A 412 HOH A 417 HOH A 438 SITE 5 AC2 18 HOH A 452 HOH A 473 SITE 1 AC3 5 HIS A 158 ASN A 159 LYS A 182 C2E A 301 SITE 2 AC3 5 HOH A 404 SITE 1 AC4 6 ARG A -3 GLY A -2 SER A -1 HIS A 0 SITE 2 AC4 6 HOH A 437 HOH A 469 SITE 1 AC5 5 HIS A 0 THR A 5 LYS A 7 HOH A 409 SITE 2 AC5 5 HOH A 420 SITE 1 AC6 1 CYS A 100 SITE 1 AC7 4 ARG A 106 C2E A 301 HOH A 405 HOH A 417 SITE 1 AC8 1 ASN A 128 CRYST1 68.556 68.556 179.457 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014587 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005572 0.00000