HEADER TRANSFERASE 04-NOV-15 5EKU TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI PROTEIN ARGININE TITLE 2 METHYLTRANSFERASE PRMT7 IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE N-METHYLTRANSFERASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 3 ORGANISM_TAXID: 5702; SOURCE 4 STRAIN: LISTER 427; SOURCE 5 GENE: TB427.07.5490; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.W.DEBLER,P.STAVROPOULOS REVDAT 2 01-NOV-17 5EKU 1 JRNL REMARK REVDAT 1 18-MAY-16 5EKU 0 JRNL AUTH E.W.DEBLER,K.JAIN,R.A.WARMACK,Y.FENG,S.G.CLARKE,G.BLOBEL, JRNL AUTH 2 P.STAVROPOULOS JRNL TITL A GLUTAMATE/ASPARTATE SWITCH CONTROLS PRODUCT SPECIFICITY IN JRNL TITL 2 A PROTEIN ARGININE METHYLTRANSFERASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 2068 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 26858449 JRNL DOI 10.1073/PNAS.1525783113 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34586 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.770 REMARK 3 FREE R VALUE TEST SET COUNT : 3380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8718 - 8.0653 0.99 1386 140 0.2007 0.2308 REMARK 3 2 8.0653 - 6.4072 1.00 1335 158 0.2141 0.2451 REMARK 3 3 6.4072 - 5.5989 1.00 1310 147 0.2200 0.2816 REMARK 3 4 5.5989 - 5.0877 1.00 1308 147 0.2075 0.2240 REMARK 3 5 5.0877 - 4.7235 1.00 1344 117 0.1768 0.2391 REMARK 3 6 4.7235 - 4.4452 1.00 1296 154 0.1772 0.2022 REMARK 3 7 4.4452 - 4.2228 1.00 1297 142 0.1941 0.2522 REMARK 3 8 4.2228 - 4.0391 1.00 1281 147 0.1829 0.2186 REMARK 3 9 4.0391 - 3.8837 1.00 1317 152 0.2166 0.2277 REMARK 3 10 3.8837 - 3.7497 1.00 1287 134 0.2241 0.2748 REMARK 3 11 3.7497 - 3.6325 1.00 1297 129 0.2266 0.2854 REMARK 3 12 3.6325 - 3.5287 1.00 1308 146 0.2300 0.2853 REMARK 3 13 3.5287 - 3.4359 1.00 1262 143 0.2235 0.2366 REMARK 3 14 3.4359 - 3.3521 1.00 1304 133 0.2400 0.3024 REMARK 3 15 3.3521 - 3.2759 1.00 1323 135 0.2569 0.2832 REMARK 3 16 3.2759 - 3.2062 1.00 1265 138 0.2724 0.2772 REMARK 3 17 3.2062 - 3.1421 1.00 1281 139 0.2984 0.3991 REMARK 3 18 3.1421 - 3.0828 1.00 1309 126 0.3082 0.3340 REMARK 3 19 3.0828 - 3.0277 1.00 1276 147 0.2967 0.3529 REMARK 3 20 3.0277 - 2.9764 1.00 1297 132 0.3153 0.3866 REMARK 3 21 2.9764 - 2.9284 1.00 1285 154 0.3060 0.3715 REMARK 3 22 2.9284 - 2.8834 1.00 1286 152 0.3232 0.4062 REMARK 3 23 2.8834 - 2.8410 1.00 1268 120 0.3160 0.3544 REMARK 3 24 2.8410 - 2.8010 0.99 1284 148 0.2990 0.3451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5695 REMARK 3 ANGLE : 0.854 7719 REMARK 3 CHIRALITY : 0.031 855 REMARK 3 PLANARITY : 0.005 1003 REMARK 3 DIHEDRAL : 14.058 2121 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 30.6269 86.7315 37.5536 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.6167 REMARK 3 T33: 0.5810 T12: 0.1676 REMARK 3 T13: -0.0135 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.1426 L22: 1.1745 REMARK 3 L33: 1.4350 L12: -0.5843 REMARK 3 L13: 0.4731 L23: -0.2079 REMARK 3 S TENSOR REMARK 3 S11: 0.0554 S12: 0.1115 S13: -0.0912 REMARK 3 S21: -0.1780 S22: -0.0400 S23: 0.0588 REMARK 3 S31: 0.1030 S32: 0.1809 S33: -0.0579 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 17.7282 113.2749 44.3725 REMARK 3 T TENSOR REMARK 3 T11: 0.6319 T22: 0.6034 REMARK 3 T33: 0.6288 T12: 0.1837 REMARK 3 T13: 0.0386 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.8202 L22: 1.3737 REMARK 3 L33: 1.3068 L12: -0.4123 REMARK 3 L13: -0.1838 L23: -0.5071 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: 0.0236 S13: 0.1272 REMARK 3 S21: 0.1319 S22: 0.0943 S23: 0.0948 REMARK 3 S31: -0.4673 S32: -0.2032 S33: -0.0739 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215090. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34602 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.88600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, MAGNESIUM CHLORIDE, TRIS, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.92933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.46467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.46467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.92933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER CONFIRMED BY GEL FILTRATION, MULTI-ANGLE LIGHT REMARK 300 SCATTERING REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 HIS A 6 REMARK 465 ARG A 7 REMARK 465 HIS A 8 REMARK 465 GLN A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 ASP A 12 REMARK 465 LYS A 13 REMARK 465 ASN A 14 REMARK 465 ASP A 15 REMARK 465 ASN A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 GLN A 19 REMARK 465 ASN A 20 REMARK 465 THR A 21 REMARK 465 ILE A 22 REMARK 465 GLY A 23 REMARK 465 PHE A 24 REMARK 465 VAL A 25 REMARK 465 PRO A 26 REMARK 465 PRO A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 THR A 30 REMARK 465 LEU A 31 REMARK 465 ALA A 32 REMARK 465 SER A 33 REMARK 465 VAL A 34 REMARK 465 SER A 35 REMARK 465 GLY A 36 REMARK 465 TYR A 37 REMARK 465 SER A 377 REMARK 465 GLY A 378 REMARK 465 ASN A 379 REMARK 465 GLY A 380 REMARK 465 GLU A 381 REMARK 465 GLU A 386 REMARK 465 GLY A 387 REMARK 465 LYS A 388 REMARK 465 THR A 389 REMARK 465 THR A 390 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 PRO B 3 REMARK 465 LYS B 4 REMARK 465 GLN B 5 REMARK 465 HIS B 6 REMARK 465 ARG B 7 REMARK 465 HIS B 8 REMARK 465 GLN B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 ASP B 12 REMARK 465 LYS B 13 REMARK 465 ASN B 14 REMARK 465 ASP B 15 REMARK 465 ASN B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 GLN B 19 REMARK 465 ASN B 20 REMARK 465 THR B 21 REMARK 465 ILE B 22 REMARK 465 GLY B 23 REMARK 465 PHE B 24 REMARK 465 VAL B 25 REMARK 465 PRO B 26 REMARK 465 PRO B 27 REMARK 465 GLY B 28 REMARK 465 ALA B 29 REMARK 465 THR B 30 REMARK 465 LEU B 31 REMARK 465 ALA B 32 REMARK 465 SER B 33 REMARK 465 VAL B 34 REMARK 465 SER B 35 REMARK 465 SER B 377 REMARK 465 GLY B 378 REMARK 465 ASN B 379 REMARK 465 GLY B 380 REMARK 465 GLY B 387 REMARK 465 LYS B 388 REMARK 465 THR B 389 REMARK 465 THR B 390 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 71 -52.04 -134.28 REMARK 500 PRO A 95 19.22 -65.34 REMARK 500 ARG A 228 -128.63 55.60 REMARK 500 SER A 275 -22.53 -151.00 REMARK 500 ASP A 309 -113.60 51.73 REMARK 500 TRP A 330 -60.51 -122.98 REMARK 500 SER A 340 -150.45 -146.06 REMARK 500 ARG A 366 19.28 54.72 REMARK 500 PHE B 71 -50.60 -127.34 REMARK 500 PRO B 95 -5.93 -54.78 REMARK 500 MET B 143 36.56 -75.69 REMARK 500 ARG B 228 -128.51 59.80 REMARK 500 SER B 275 -28.47 -159.69 REMARK 500 ASP B 309 -120.16 55.34 REMARK 500 SER B 340 -152.17 -149.17 REMARK 500 GLU B 384 45.71 -109.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 401 REMARK 999 REMARK 999 SEQUENCE REMARK 999 UNIPROT DOES NOT CONTAIN A REFERENCE SEQUENCE FOR THIS STRAIN. THE REMARK 999 CONFLICTS ARE RELATIVE TO THE CLOSEST ENTRY. DBREF 5EKU A 1 390 UNP D6XJ80 D6XJ80_TRYB2 1 390 DBREF 5EKU B 1 390 UNP D6XJ80 D6XJ80_TRYB2 1 390 SEQADV 5EKU PRO A 159 UNP D6XJ80 SER 159 SEE REMARK 999 SEQADV 5EKU SER A 282 UNP D6XJ80 PRO 282 SEE REMARK 999 SEQADV 5EKU PRO B 159 UNP D6XJ80 SER 159 SEE REMARK 999 SEQADV 5EKU SER B 282 UNP D6XJ80 PRO 282 SEE REMARK 999 SEQRES 1 A 390 MET PRO PRO LYS GLN HIS ARG HIS GLN LYS LYS ASP LYS SEQRES 2 A 390 ASN ASP ASN ALA LEU GLN ASN THR ILE GLY PHE VAL PRO SEQRES 3 A 390 PRO GLY ALA THR LEU ALA SER VAL SER GLY TYR ARG PRO SEQRES 4 A 390 PRO ASP ALA PHE VAL ASN ARG ILE ASP ARG ASN ILE PRO SEQRES 5 A 390 VAL PRO ALA ARG LEU ARG HIS THR PRO VAL SER LEU ILE SEQRES 6 A 390 GLU ALA VAL ASN ASP PHE HIS TYR ALA MET MET ASN ASP SEQRES 7 A 390 GLU GLU ARG ASN ASN PHE TYR TYR GLU VAL LEU LYS LYS SEQRES 8 A 390 HIS VAL THR PRO GLU THR GLY VAL LEU GLU ILE GLY ALA SEQRES 9 A 390 GLY SER GLY LEU LEU SER LEU MET ALA ALA LYS LEU GLY SEQRES 10 A 390 ALA LYS TRP VAL VAL ALA VAL GLU GLY SER GLU GLU LEU SEQRES 11 A 390 ALA LYS LEU ALA ARG GLU ASN ILE ARG ALA ASN ASN MET SEQRES 12 A 390 GLU HIS GLN VAL LYS VAL LEU HIS MET MET SER THR GLU SEQRES 13 A 390 LEU LYS PRO LYS HIS LEU PRO GLU PRO PRO ASP VAL LEU SEQRES 14 A 390 LEU SER GLU ILE PHE GLY THR MET MET LEU GLY GLU SER SEQRES 15 A 390 ALA LEU ASP TYR VAL VAL ASP VAL ARG ASN ARG LEU LEU SEQRES 16 A 390 LYS PRO THR THR LYS ILE ILE PRO GLN PHE GLY THR GLN SEQRES 17 A 390 TYR ALA VAL PRO ILE GLU CYS ASP ALA LEU HIS ARG ILE SEQRES 18 A 390 SER SER VAL SER GLY TRP ARG ASP LEU ASP LEU LYS HIS SEQRES 19 A 390 MET MET THR LEU GLN ASP THR VAL SER ILE VAL PHE ALA SEQRES 20 A 390 LYS HIS TYR GLY ILE ARG MET ASN SER VAL ASN PHE ARG SEQRES 21 A 390 ARG LEU SER ASP PRO ILE GLU LEU PHE ARG VAL ASP PHE SEQRES 22 A 390 SER SER SER ASN ARG ASN ASP ILE SER ARG ARG LYS HIS SEQRES 23 A 390 PHE ASP VAL VAL ALA LYS GLU SER GLY THR ALA HIS ALA SEQRES 24 A 390 MET LEU PHE TYR TRP LYS VAL THR ASP ASP GLU PHE VAL SEQRES 25 A 390 MET SER THR ASP PRO GLU ASP THR VAL ASN ASN PHE PRO SEQRES 26 A 390 ARG ASP MET GLN TRP GLY GLN ALA LEU GLN LEU LEU ASP SEQRES 27 A 390 ALA SER ASN GLY PRO LEU PRO THR PRO VAL VAL PHE THR SEQRES 28 A 390 GLU GLY LYS ASN TYR ASN PHE GLU CYS ASN PHE SER GLY SEQRES 29 A 390 ASP ARG VAL ILE LEU HIS MET GLN LEU CYS PRO GLU SER SEQRES 30 A 390 GLY ASN GLY GLU MET THR GLU CYS GLU GLY LYS THR THR SEQRES 1 B 390 MET PRO PRO LYS GLN HIS ARG HIS GLN LYS LYS ASP LYS SEQRES 2 B 390 ASN ASP ASN ALA LEU GLN ASN THR ILE GLY PHE VAL PRO SEQRES 3 B 390 PRO GLY ALA THR LEU ALA SER VAL SER GLY TYR ARG PRO SEQRES 4 B 390 PRO ASP ALA PHE VAL ASN ARG ILE ASP ARG ASN ILE PRO SEQRES 5 B 390 VAL PRO ALA ARG LEU ARG HIS THR PRO VAL SER LEU ILE SEQRES 6 B 390 GLU ALA VAL ASN ASP PHE HIS TYR ALA MET MET ASN ASP SEQRES 7 B 390 GLU GLU ARG ASN ASN PHE TYR TYR GLU VAL LEU LYS LYS SEQRES 8 B 390 HIS VAL THR PRO GLU THR GLY VAL LEU GLU ILE GLY ALA SEQRES 9 B 390 GLY SER GLY LEU LEU SER LEU MET ALA ALA LYS LEU GLY SEQRES 10 B 390 ALA LYS TRP VAL VAL ALA VAL GLU GLY SER GLU GLU LEU SEQRES 11 B 390 ALA LYS LEU ALA ARG GLU ASN ILE ARG ALA ASN ASN MET SEQRES 12 B 390 GLU HIS GLN VAL LYS VAL LEU HIS MET MET SER THR GLU SEQRES 13 B 390 LEU LYS PRO LYS HIS LEU PRO GLU PRO PRO ASP VAL LEU SEQRES 14 B 390 LEU SER GLU ILE PHE GLY THR MET MET LEU GLY GLU SER SEQRES 15 B 390 ALA LEU ASP TYR VAL VAL ASP VAL ARG ASN ARG LEU LEU SEQRES 16 B 390 LYS PRO THR THR LYS ILE ILE PRO GLN PHE GLY THR GLN SEQRES 17 B 390 TYR ALA VAL PRO ILE GLU CYS ASP ALA LEU HIS ARG ILE SEQRES 18 B 390 SER SER VAL SER GLY TRP ARG ASP LEU ASP LEU LYS HIS SEQRES 19 B 390 MET MET THR LEU GLN ASP THR VAL SER ILE VAL PHE ALA SEQRES 20 B 390 LYS HIS TYR GLY ILE ARG MET ASN SER VAL ASN PHE ARG SEQRES 21 B 390 ARG LEU SER ASP PRO ILE GLU LEU PHE ARG VAL ASP PHE SEQRES 22 B 390 SER SER SER ASN ARG ASN ASP ILE SER ARG ARG LYS HIS SEQRES 23 B 390 PHE ASP VAL VAL ALA LYS GLU SER GLY THR ALA HIS ALA SEQRES 24 B 390 MET LEU PHE TYR TRP LYS VAL THR ASP ASP GLU PHE VAL SEQRES 25 B 390 MET SER THR ASP PRO GLU ASP THR VAL ASN ASN PHE PRO SEQRES 26 B 390 ARG ASP MET GLN TRP GLY GLN ALA LEU GLN LEU LEU ASP SEQRES 27 B 390 ALA SER ASN GLY PRO LEU PRO THR PRO VAL VAL PHE THR SEQRES 28 B 390 GLU GLY LYS ASN TYR ASN PHE GLU CYS ASN PHE SER GLY SEQRES 29 B 390 ASP ARG VAL ILE LEU HIS MET GLN LEU CYS PRO GLU SER SEQRES 30 B 390 GLY ASN GLY GLU MET THR GLU CYS GLU GLY LYS THR THR HET SAH A 401 26 HET SAH B 401 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 3 SAH 2(C14 H20 N6 O5 S) HELIX 1 AA1 PHE A 43 ILE A 47 5 5 HELIX 2 AA2 PRO A 54 HIS A 59 1 6 HELIX 3 AA3 PRO A 61 PHE A 71 1 11 HELIX 4 AA4 PHE A 71 ASP A 78 1 8 HELIX 5 AA5 ASP A 78 LYS A 90 1 13 HELIX 6 AA6 GLY A 107 LEU A 116 1 10 HELIX 7 AA7 SER A 127 ASN A 141 1 15 HELIX 8 AA8 LYS A 158 LEU A 162 5 5 HELIX 9 AA9 MET A 177 GLU A 181 5 5 HELIX 10 AB1 SER A 182 LEU A 194 1 13 HELIX 11 AB2 CYS A 215 SER A 223 1 9 HELIX 12 AB3 LYS A 233 GLN A 239 5 7 HELIX 13 AB4 LYS A 248 TYR A 250 5 3 HELIX 14 AB5 ASN A 277 ILE A 281 5 5 HELIX 15 AB6 ASN A 323 TRP A 330 1 8 HELIX 16 AB7 PHE B 43 ILE B 47 5 5 HELIX 17 AB8 PRO B 54 HIS B 59 1 6 HELIX 18 AB9 PRO B 61 PHE B 71 1 11 HELIX 19 AC1 PHE B 71 ASN B 77 1 7 HELIX 20 AC2 ASP B 78 LYS B 91 1 14 HELIX 21 AC3 GLY B 107 LEU B 116 1 10 HELIX 22 AC4 SER B 127 ASN B 141 1 15 HELIX 23 AC5 MET B 153 LEU B 157 5 5 HELIX 24 AC6 LYS B 158 LEU B 162 5 5 HELIX 25 AC7 SER B 182 LEU B 194 1 13 HELIX 26 AC8 CYS B 215 SER B 223 1 9 HELIX 27 AC9 LYS B 233 GLN B 239 5 7 HELIX 28 AD1 LYS B 248 GLY B 251 5 4 HELIX 29 AD2 ASN B 323 TRP B 330 1 8 SHEET 1 AA1 5 VAL A 147 HIS A 151 0 SHEET 2 AA1 5 TRP A 120 GLU A 125 1 N VAL A 121 O LYS A 148 SHEET 3 AA1 5 GLY A 98 ILE A 102 1 N GLU A 101 O VAL A 124 SHEET 4 AA1 5 VAL A 168 SER A 171 1 O VAL A 168 N LEU A 100 SHEET 5 AA1 5 LYS A 200 ILE A 202 1 O ILE A 202 N LEU A 169 SHEET 1 AA2 5 VAL A 245 PHE A 246 0 SHEET 2 AA2 5 ALA A 333 LEU A 336 -1 O LEU A 334 N VAL A 245 SHEET 3 AA2 5 ALA A 299 ASP A 308 -1 N MET A 300 O GLN A 335 SHEET 4 AA2 5 PHE A 205 GLU A 214 -1 N VAL A 211 O LEU A 301 SHEET 5 AA2 5 ILE A 266 ASP A 272 -1 O ILE A 266 N ALA A 210 SHEET 1 AA3 4 ARG A 260 ARG A 261 0 SHEET 2 AA3 4 PHE A 205 GLU A 214 -1 N GLU A 214 O ARG A 260 SHEET 3 AA3 4 ALA A 299 ASP A 308 -1 O LEU A 301 N VAL A 211 SHEET 4 AA3 4 PHE A 311 SER A 314 -1 O MET A 313 N VAL A 306 SHEET 1 AA4 2 GLY A 226 TRP A 227 0 SHEET 2 AA4 2 LEU A 230 ASP A 231 -1 O LEU A 230 N TRP A 227 SHEET 1 AA5 3 ARG A 284 VAL A 290 0 SHEET 2 AA5 3 ASN A 355 PHE A 362 -1 O CYS A 360 N LYS A 285 SHEET 3 AA5 3 LEU A 369 LEU A 373 -1 O GLN A 372 N GLU A 359 SHEET 1 AA6 2 GLY A 295 THR A 296 0 SHEET 2 AA6 2 VAL A 349 PHE A 350 -1 O PHE A 350 N GLY A 295 SHEET 1 AA7 5 VAL B 147 HIS B 151 0 SHEET 2 AA7 5 TRP B 120 GLU B 125 1 N ALA B 123 O LYS B 148 SHEET 3 AA7 5 GLY B 98 ILE B 102 1 N VAL B 99 O TRP B 120 SHEET 4 AA7 5 VAL B 168 SER B 171 1 O LEU B 170 N LEU B 100 SHEET 5 AA7 5 LYS B 200 ILE B 202 1 O ILE B 202 N LEU B 169 SHEET 1 AA8 5 VAL B 245 PHE B 246 0 SHEET 2 AA8 5 ALA B 333 LEU B 336 -1 O LEU B 334 N VAL B 245 SHEET 3 AA8 5 ALA B 299 ASP B 308 -1 N PHE B 302 O ALA B 333 SHEET 4 AA8 5 PHE B 205 GLU B 214 -1 N VAL B 211 O LEU B 301 SHEET 5 AA8 5 ILE B 266 ASP B 272 -1 O VAL B 271 N GLY B 206 SHEET 1 AA9 4 ARG B 260 ARG B 261 0 SHEET 2 AA9 4 PHE B 205 GLU B 214 -1 N GLU B 214 O ARG B 260 SHEET 3 AA9 4 ALA B 299 ASP B 308 -1 O LEU B 301 N VAL B 211 SHEET 4 AA9 4 PHE B 311 SER B 314 -1 O MET B 313 N VAL B 306 SHEET 1 AB1 2 GLY B 226 TRP B 227 0 SHEET 2 AB1 2 LEU B 230 ASP B 231 -1 O LEU B 230 N TRP B 227 SHEET 1 AB2 3 ARG B 284 VAL B 290 0 SHEET 2 AB2 3 ASN B 355 PHE B 362 -1 O TYR B 356 N VAL B 289 SHEET 3 AB2 3 LEU B 369 LEU B 373 -1 O GLN B 372 N GLU B 359 SHEET 1 AB3 2 GLY B 295 ALA B 297 0 SHEET 2 AB3 2 VAL B 348 PHE B 350 -1 O PHE B 350 N GLY B 295 SSBOND 1 CYS A 374 CYS A 385 1555 1555 2.03 SSBOND 2 CYS B 374 CYS B 385 1555 1555 2.03 CISPEP 1 ILE A 202 PRO A 203 0 -0.11 CISPEP 2 ILE B 202 PRO B 203 0 -4.30 SITE 1 AC1 17 MET A 75 ARG A 81 GLU A 101 ILE A 102 SITE 2 AC1 17 GLY A 103 ALA A 104 GLY A 105 SER A 106 SITE 3 AC1 17 LEU A 109 VAL A 124 GLU A 125 GLY A 126 SITE 4 AC1 17 LEU A 130 MET A 153 SER A 154 GLU A 172 SITE 5 AC1 17 TYR A 186 SITE 1 AC2 14 MET B 75 ARG B 81 GLU B 101 GLY B 103 SITE 2 AC2 14 ALA B 104 SER B 106 LEU B 109 GLU B 125 SITE 3 AC2 14 GLY B 126 LEU B 130 MET B 153 SER B 154 SITE 4 AC2 14 GLU B 172 TYR B 186 CRYST1 157.618 157.618 97.394 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006344 0.003663 0.000000 0.00000 SCALE2 0.000000 0.007326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010268 0.00000