HEADER SIGNALING PROTEIN 09-NOV-15 5ENH TITLE CRYSTAL STRUCTURE OF THE SECOND BROMODOMAIN OF PLECKSTRIN HOMOLOGY TITLE 2 DOMAIN INTERACTING PROTEIN (PHIP) IN COMPLEX WITH COMPOUND-12 N11528 TITLE 3 (SGC - DIAMOND I04-1 FRAGMENT SCREENING) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PH-INTERACTING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMODOMAIN, UNP RESIDUES 1315-1440; COMPND 5 SYNONYM: PHIP,IRS-1 PH DOMAIN-BINDING PROTEIN,WD REPEAT-CONTAINING COMPND 6 PROTEIN 11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PHIP, WDR11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS BROMODOMAIN, PHIP, CRYSTALLOGRAPHIC FRAGMENT SCREEN, STRUCTURAL KEYWDS 2 GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSCRIPTION, KEYWDS 3 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KROJER,R.TALON,P.COLLINS,A.BRADLEY,O.COX,A.SZYKOWSKA,N.BURGESS- AUTHOR 2 BROWN,P.BRENNAN,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,F.VON DELFT, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 10-JAN-24 5ENH 1 REMARK REVDAT 2 11-JUL-18 5ENH 1 JRNL REVDAT 1 27-APR-16 5ENH 0 JRNL AUTH O.B.COX,T.KROJER,P.COLLINS,O.MONTEIRO,R.TALON,A.BRADLEY, JRNL AUTH 2 O.FEDOROV,J.AMIN,B.D.MARSDEN,J.SPENCER,F.VON DELFT, JRNL AUTH 3 P.E.BRENNAN JRNL TITL A POISED FRAGMENT LIBRARY ENABLES RAPID SYNTHETIC EXPANSION JRNL TITL 2 YIELDING THE FIRST REPORTED INHIBITORS OF PHIP(2), AN JRNL TITL 3 ATYPICAL BROMODOMAIN. JRNL REF CHEM SCI V. 7 2322 2016 JRNL REFN ISSN 2041-6520 JRNL PMID 29910922 JRNL DOI 10.1039/C5SC03115J REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 9842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 503 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 722 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 991 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 63 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.28000 REMARK 3 B22 (A**2) : 3.35000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.182 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.459 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1029 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 924 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1391 ; 1.541 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2128 ; 1.038 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 122 ; 6.830 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 51 ;30.731 ;23.922 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 172 ;14.779 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;14.696 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 147 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1198 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 241 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 491 ; 1.799 ; 3.281 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 492 ; 1.797 ; 3.286 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 613 ; 2.762 ; 4.911 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1313 A 1319 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6091 21.2586 -11.1842 REMARK 3 T TENSOR REMARK 3 T11: 0.0859 T22: 0.0534 REMARK 3 T33: 0.2170 T12: -0.0277 REMARK 3 T13: 0.0541 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 6.4787 L22: 7.5935 REMARK 3 L33: 1.5256 L12: 3.6762 REMARK 3 L13: 0.5038 L23: -2.5744 REMARK 3 S TENSOR REMARK 3 S11: 0.1451 S12: -0.4352 S13: -0.1767 REMARK 3 S21: -0.0328 S22: -0.5110 S23: -0.7999 REMARK 3 S31: 0.0705 S32: 0.1040 S33: 0.3658 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1320 A 1352 REMARK 3 ORIGIN FOR THE GROUP (A): -14.0092 10.4547 -4.6214 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1079 REMARK 3 T33: 0.1044 T12: 0.0366 REMARK 3 T13: -0.0608 T23: -0.0596 REMARK 3 L TENSOR REMARK 3 L11: 1.3253 L22: 1.3316 REMARK 3 L33: 1.1488 L12: -0.1203 REMARK 3 L13: -0.3806 L23: 1.0808 REMARK 3 S TENSOR REMARK 3 S11: -0.1151 S12: -0.2265 S13: 0.2121 REMARK 3 S21: 0.2089 S22: 0.0137 S23: 0.0597 REMARK 3 S31: 0.0878 S32: -0.0316 S33: 0.1013 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1353 A 1371 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0322 1.8841 -7.3504 REMARK 3 T TENSOR REMARK 3 T11: 0.1268 T22: 0.0950 REMARK 3 T33: 0.1241 T12: -0.0555 REMARK 3 T13: -0.0093 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.9309 L22: 1.4656 REMARK 3 L33: 0.5590 L12: 1.1066 REMARK 3 L13: 1.2772 L23: 0.5046 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: -0.1546 S13: -0.2629 REMARK 3 S21: 0.0869 S22: 0.1392 S23: -0.2123 REMARK 3 S31: -0.0082 S32: -0.0692 S33: -0.1016 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1372 A 1395 REMARK 3 ORIGIN FOR THE GROUP (A): -9.6011 6.4769 -13.1750 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.0894 REMARK 3 T33: 0.1227 T12: -0.0724 REMARK 3 T13: 0.0177 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 3.1826 L22: 0.7228 REMARK 3 L33: 0.7223 L12: 0.9448 REMARK 3 L13: 1.1976 L23: 0.5478 REMARK 3 S TENSOR REMARK 3 S11: -0.0771 S12: 0.1561 S13: -0.1036 REMARK 3 S21: -0.0874 S22: 0.0883 S23: -0.1240 REMARK 3 S31: 0.0711 S32: -0.0197 S33: -0.0112 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1396 A 1435 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0986 15.0157 -16.0915 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0725 REMARK 3 T33: 0.1857 T12: -0.0625 REMARK 3 T13: -0.0042 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 4.0731 L22: 0.9254 REMARK 3 L33: 0.4965 L12: 1.0768 REMARK 3 L13: -0.4692 L23: 0.3980 REMARK 3 S TENSOR REMARK 3 S11: -0.0991 S12: 0.2539 S13: 0.3291 REMARK 3 S21: -0.1502 S22: 0.0718 S23: 0.1068 REMARK 3 S31: -0.0697 S32: -0.0428 S33: 0.0273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5ENH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215227. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10378 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 28.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.80500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3MB3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5 , 0.15M MAGNESIUM REMARK 280 CHLORIDE , 32% PEG3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 29.92000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.30300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.92000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.30300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 1310 REMARK 465 PHE A 1311 REMARK 465 GLN A 1312 REMARK 465 THR A 1436 REMARK 465 ILE A 1437 REMARK 465 THR A 1438 REMARK 465 LYS A 1439 REMARK 465 ARG A 1440 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A1313 OG REMARK 470 LYS A1323 CE NZ REMARK 470 GLU A1336 CG CD OE1 OE2 REMARK 470 LEU A1347 CG CD1 CD2 REMARK 470 LEU A1348 CG CD1 CD2 REMARK 470 ARG A1430 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1433 CG CD CE NZ REMARK 470 ARG A1434 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 1313 MET A 1314 -144.20 REMARK 500 TYR A 1350 PRO A 1351 -146.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5QB A 1501 DBREF 5ENH A 1315 1440 UNP Q8WWQ0 PHIP_HUMAN 1315 1440 SEQADV 5ENH TYR A 1310 UNP Q8WWQ0 EXPRESSION TAG SEQADV 5ENH PHE A 1311 UNP Q8WWQ0 EXPRESSION TAG SEQADV 5ENH GLN A 1312 UNP Q8WWQ0 EXPRESSION TAG SEQADV 5ENH SER A 1313 UNP Q8WWQ0 EXPRESSION TAG SEQADV 5ENH MET A 1314 UNP Q8WWQ0 EXPRESSION TAG SEQRES 1 A 131 TYR PHE GLN SER MET SER TYR ASP ILE GLN ALA TRP LYS SEQRES 2 A 131 LYS GLN CYS GLU GLU LEU LEU ASN LEU ILE PHE GLN CYS SEQRES 3 A 131 GLU ASP SER GLU PRO PHE ARG GLN PRO VAL ASP LEU LEU SEQRES 4 A 131 GLU TYR PRO ASP TYR ARG ASP ILE ILE ASP THR PRO MET SEQRES 5 A 131 ASP PHE ALA THR VAL ARG GLU THR LEU GLU ALA GLY ASN SEQRES 6 A 131 TYR GLU SER PRO MET GLU LEU CYS LYS ASP VAL ARG LEU SEQRES 7 A 131 ILE PHE SER ASN SER LYS ALA TYR THR PRO SER LYS ARG SEQRES 8 A 131 SER ARG ILE TYR SER MET SER LEU ARG LEU SER ALA PHE SEQRES 9 A 131 PHE GLU GLU HIS ILE SER SER VAL LEU SER ASP TYR LYS SEQRES 10 A 131 SER ALA LEU ARG PHE HIS LYS ARG ASN THR ILE THR LYS SEQRES 11 A 131 ARG HET 5QB A1501 15 HETNAM 5QB ~{N}-[(2,6-DIMETHOXYPHENYL)METHYL]ETHANAMIDE FORMUL 2 5QB C11 H15 N O3 FORMUL 3 HOH *63(H2 O) HELIX 1 AA1 GLN A 1319 CYS A 1335 1 17 HELIX 2 AA2 GLU A 1336 ARG A 1342 5 7 HELIX 3 AA3 ASP A 1352 ILE A 1357 1 6 HELIX 4 AA4 ASP A 1362 ALA A 1372 1 11 HELIX 5 AA5 SER A 1377 THR A 1396 1 20 HELIX 6 AA6 SER A 1401 ASN A 1435 1 35 SITE 1 AC1 6 PRO A1340 VAL A1345 TYR A1350 TYR A1395 SITE 2 AC1 6 HOH A1601 HOH A1605 CRYST1 59.840 92.606 24.060 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016711 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010798 0.000000 0.00000 SCALE3 0.000000 0.000000 0.041563 0.00000