data_5ERZ
# 
_entry.id   5ERZ 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.281 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
PDB   5ERZ         
WWPDB D_1000215365 
# 
_pdbx_database_PDB_obs_spr.id               OBSLTE 
_pdbx_database_PDB_obs_spr.date             2017-07-26 
_pdbx_database_PDB_obs_spr.pdb_id           5XEW 
_pdbx_database_PDB_obs_spr.replace_pdb_id   5ERZ 
_pdbx_database_PDB_obs_spr.details          ? 
# 
_pdbx_database_related.db_name        PDB 
_pdbx_database_related.details        . 
_pdbx_database_related.db_id          5ES0 
_pdbx_database_related.content_type   unspecified 
# 
_pdbx_database_status.status_code                     OBS 
_pdbx_database_status.status_code_sf                  OBS 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.entry_id                        5ERZ 
_pdbx_database_status.recvd_initial_deposition_date   2015-11-16 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    PDBJ 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Tseng, W.H.' 1 
'Wu, P.C.'    2 
'Hou, M.H.'   3 
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   ? 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            'To Be Published' 
_citation.journal_id_ASTM           ? 
_citation.journal_id_CSD            0353 
_citation.journal_id_ISSN           ? 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            ? 
_citation.language                  ? 
_citation.page_first                ? 
_citation.page_last                 ? 
_citation.title                     'Crystal structure of the [Ni2+-(chromomycin A3)2]-d(TTCCGCCGCCGAA)2 complex' 
_citation.year                      ? 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      ? 
_citation.pdbx_database_id_PubMed   ? 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
primary 'Tseng, W.H.' 1 
primary 'Wu, P.C.'    2 
primary 'Hou, M.H.'   3 
# 
_cell.entry_id           5ERZ 
_cell.length_a           48.291 
_cell.length_b           48.291 
_cell.length_c           83.356 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              12 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         5ERZ 
_symmetry.space_group_name_H-M             'P 32 1 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                153 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*TP*TP*CP*CP*GP*CP*CP*GP*CP*CP*GP*AP*A)-3')
;
3912.550 2   ? ? ? ? 
2 non-polymer man 4-O-METHYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE 162.184  2   ? ? ? ? 
3 non-polymer man '[O4]-ACETOXY-2,3-DIDEOXYFUCOSE' 174.194  2   ? ? ? ? 
4 non-polymer syn 
'(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' 420.410  
2   ? ? ? ? 
5 non-polymer man 2,3-DIDEOXYFUCOSE 132.158  4   ? ? ? ? 
6 non-polymer man 4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE 204.220  2   ? ? ? ? 
7 non-polymer nat 'NICKEL (II) ION' 58.693   3   ? ? ? ? 
8 water       nat water 18.015   202 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DT)(DT)(DC)(DC)(DG)(DC)(DC)(DG)(DC)(DC)(DG)(DA)(DA)' 
_entity_poly.pdbx_seq_one_letter_code_can   TTCCGCCGCCGAA 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DT n 
1 2  DT n 
1 3  DC n 
1 4  DC n 
1 5  DG n 
1 6  DC n 
1 7  DC n 
1 8  DG n 
1 9  DC n 
1 10 DC n 
1 11 DG n 
1 12 DA n 
1 13 DA n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       1 
_pdbx_entity_src_syn.pdbx_end_seq_num       13 
_pdbx_entity_src_syn.organism_scientific    'synthetic construct' 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       32630 
_pdbx_entity_src_syn.details                ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    5ERZ 
_struct_ref.pdbx_db_accession          5ERZ 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           1 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 5ERZ A 1 ? 13 ? 5ERZ 1  ? 13 ? 1  13 
2 1 5ERZ B 1 ? 13 ? 5ERZ 14 ? 26 ? 14 26 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
1GL D-saccharide  . 4-O-METHYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE ?    'C7 H14 O4'       162.184 
ARI D-saccharide  . '[O4]-ACETOXY-2,3-DIDEOXYFUCOSE' ?    'C8 H14 O4'       174.194 
CDR saccharide    . 2,3-DIDEOXYFUCOSE ?    'C6 H12 O3'       132.158 
CPH non-polymer   . 
'(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' None 
'C21 H24 O9'      420.410 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?    'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?    'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?    'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?    'C10 H15 N2 O8 P' 322.208 
ERI saccharide    . 4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE ?    'C9 H16 O5'       204.220 
HOH non-polymer   . WATER ?    'H2 O'            18.015  
NI  non-polymer   . 'NICKEL (II) ION' ?    'Ni 2'            58.693  
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   5ERZ 
_exptl.crystals_number            1 
_exptl.details                    ? 
_exptl.method                     'X-RAY DIFFRACTION' 
_exptl.method_details             ? 
# 
_exptl_crystal.colour                      ? 
_exptl_crystal.density_diffrn              ? 
_exptl_crystal.density_Matthews            3.59 
_exptl_crystal.density_method              ? 
_exptl_crystal.density_percent_sol         65.70 
_exptl_crystal.description                 ? 
_exptl_crystal.F_000                       ? 
_exptl_crystal.id                          1 
_exptl_crystal.preparation                 ? 
_exptl_crystal.size_max                    ? 
_exptl_crystal.size_mid                    ? 
_exptl_crystal.size_min                    ? 
_exptl_crystal.size_rad                    ? 
_exptl_crystal.colour_lustre               ? 
_exptl_crystal.colour_modifier             ? 
_exptl_crystal.colour_primary              ? 
_exptl_crystal.density_meas                ? 
_exptl_crystal.density_meas_esd            ? 
_exptl_crystal.density_meas_gt             ? 
_exptl_crystal.density_meas_lt             ? 
_exptl_crystal.density_meas_temp           ? 
_exptl_crystal.density_meas_temp_esd       ? 
_exptl_crystal.density_meas_temp_gt        ? 
_exptl_crystal.density_meas_temp_lt        ? 
_exptl_crystal.pdbx_crystal_image_url      ? 
_exptl_crystal.pdbx_crystal_image_format   ? 
_exptl_crystal.pdbx_mosaicity              ? 
_exptl_crystal.pdbx_mosaicity_esd          ? 
# 
_exptl_crystal_grow.apparatus       ? 
_exptl_crystal_grow.atmosphere      ? 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.details         ? 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.method_ref      ? 
_exptl_crystal_grow.pH              6.0 
_exptl_crystal_grow.pressure        ? 
_exptl_crystal_grow.pressure_esd    ? 
_exptl_crystal_grow.seeding         ? 
_exptl_crystal_grow.seeding_ref     ? 
_exptl_crystal_grow.temp            277 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.temp_esd        ? 
_exptl_crystal_grow.time            ? 
_exptl_crystal_grow.pdbx_details    
;1.0 mM single stranded-DNA, 2.0 mM Chromomycin A3, 4mM NiSO4 6H2O, 50 mM sodium-cacodylate buffer, 5 mM MgCl2, 1 mM spermine, 3 % MPD
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.ambient_environment    ? 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.ambient_temp_esd       ? 
_diffrn.crystal_id             1 
_diffrn.crystal_support        ? 
_diffrn.crystal_treatment      ? 
_diffrn.details                ? 
_diffrn.id                     1 
_diffrn.ambient_pressure       ? 
_diffrn.ambient_pressure_esd   ? 
_diffrn.ambient_pressure_gt    ? 
_diffrn.ambient_pressure_lt    ? 
_diffrn.ambient_temp_gt        ? 
_diffrn.ambient_temp_lt        ? 
# 
_diffrn_detector.details                      ? 
_diffrn_detector.detector                     CCD 
_diffrn_detector.diffrn_id                    1 
_diffrn_detector.type                         'ADSC QUANTUM 315r' 
_diffrn_detector.area_resol_mean              ? 
_diffrn_detector.dtime                        ? 
_diffrn_detector.pdbx_frames_total            ? 
_diffrn_detector.pdbx_collection_time_total   ? 
_diffrn_detector.pdbx_collection_date         2013-01-01 
# 
_diffrn_radiation.collimation                      ? 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.filter_edge                      ? 
_diffrn_radiation.inhomogeneity                    ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.polarisn_norm                    ? 
_diffrn_radiation.polarisn_ratio                   ? 
_diffrn_radiation.probe                            ? 
_diffrn_radiation.type                             ? 
_diffrn_radiation.xray_symbol                      ? 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.pdbx_wavelength_list             ? 
_diffrn_radiation.pdbx_wavelength                  ? 
_diffrn_radiation.pdbx_diffrn_protocol             MAD 
_diffrn_radiation.pdbx_analyzer                    ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.45104 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.current                     ? 
_diffrn_source.details                     ? 
_diffrn_source.diffrn_id                   1 
_diffrn_source.power                       ? 
_diffrn_source.size                        ? 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.target                      ? 
_diffrn_source.type                        'NSRRC BEAMLINE BL13B1' 
_diffrn_source.voltage                     ? 
_diffrn_source.take-off_angle              ? 
_diffrn_source.pdbx_wavelength_list        1.45104 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_synchrotron_beamline   BL13B1 
_diffrn_source.pdbx_synchrotron_site       NSRRC 
# 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
_reflns.entry_id                     5ERZ 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             30.000 
_reflns.d_resolution_high            1.750 
_reflns.number_obs                   11436 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         99.6 
_reflns.pdbx_Rmerge_I_obs            0.05000 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        28.2000 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              10.10 
# 
_reflns_shell.pdbx_diffrn_id         1 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.d_res_high             1.75 
_reflns_shell.d_res_low              1.81 
_reflns_shell.percent_possible_all   96.5 
_reflns_shell.Rmerge_I_obs           0.36400 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        6.10 
# 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.entry_id                                 5ERZ 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.ls_number_reflns_obs                     10858 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             27.80 
_refine.ls_d_res_high                            1.75 
_refine.ls_percent_reflns_obs                    99.6 
_refine.ls_R_factor_obs                          0.190 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.188 
_refine.ls_R_factor_R_free                       0.236 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 4.800 
_refine.ls_number_reflns_R_free                  546 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.971 
_refine.correlation_coeff_Fo_to_Fc_free          0.957 
_refine.B_iso_mean                               46.54 
_refine.aniso_B[1][1]                            0.54000 
_refine.aniso_B[2][2]                            0.54000 
_refine.aniso_B[3][3]                            -1.76000 
_refine.aniso_B[1][2]                            0.54000 
_refine.aniso_B[1][3]                            0.00000 
_refine.aniso_B[2][3]                            0.00000 
_refine.solvent_model_details                    MASK 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'HYDROGENS HAVE BEEN ADDED IN THE RIDING' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          MAD 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       0.121 
_refine.pdbx_overall_ESU_R_Free                  0.123 
_refine.overall_SU_ML                            0.088 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             2.760 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   518 
_refine_hist.pdbx_number_atoms_ligand         169 
_refine_hist.number_atoms_solvent             202 
_refine_hist.number_atoms_total               889 
_refine_hist.d_res_high                       1.75 
_refine_hist.d_res_low                        27.80 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
r_bond_refined_d             0.018 0.014 ? 748  'X-RAY DIFFRACTION' ? 
r_bond_other_d               0.021 0.020 ? 429  'X-RAY DIFFRACTION' ? 
r_angle_refined_deg          2.486 1.755 ? 1128 'X-RAY DIFFRACTION' ? 
r_angle_other_deg            1.481 3.000 ? 993  'X-RAY DIFFRACTION' ? 
r_dihedral_angle_1_deg       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_dihedral_angle_2_deg       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_dihedral_angle_3_deg       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_dihedral_angle_4_deg       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_chiral_restr               0.115 0.200 ? 120  'X-RAY DIFFRACTION' ? 
r_gen_planes_refined         0.024 0.020 ? 370  'X-RAY DIFFRACTION' ? 
r_gen_planes_other           0.003 0.020 ? 146  'X-RAY DIFFRACTION' ? 
r_nbd_refined                ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_nbd_other                  ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_nbtor_refined              ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_nbtor_other                ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_refined        ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_other          ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_metal_ion_refined          ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_metal_ion_other            ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_refined       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_other         ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_refined     ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_other       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_metal_ion_refined ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_symmetry_metal_ion_other   ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_mcbond_it                  ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_mcbond_other               ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_mcangle_it                 ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_mcangle_other              ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_scbond_it                  ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_scbond_other               ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_scangle_it                 ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_scangle_other              ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_long_range_B_refined       ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_long_range_B_other         ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_rigid_bond_restr           ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_sphericity_free            ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
r_sphericity_bonded          ?     ?     ? ?    'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.d_res_high                       1.75 
_refine_ls_shell.d_res_low                        1.80 
_refine_ls_shell.number_reflns_R_work             761 
_refine_ls_shell.R_factor_R_work                  0.3200 
_refine_ls_shell.percent_reflns_obs               95.33 
_refine_ls_shell.R_factor_R_free                  0.3120 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             35 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
# 
_struct.entry_id                     5ERZ 
_struct.title                        'Crystal structure of the [Ni2+-(chromomycin A3)2]-d(TTCCGCCGCCGAA)2 complex' 
_struct.pdbx_descriptor              'DNA-Chro complex' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               ? 
# 
_struct_keywords.entry_id        5ERZ 
_struct_keywords.text            
;nucleotide flipping-out, CCG trinucleotide repeats, Chromomycin A3, Metalloantibiotics, minor groove binding drug, DNA-ANTIBIOTIC complex
;
_struct_keywords.pdbx_keywords   DNA/ANTIBIOTIC 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 4 ? 
F N N 5 ? 
G N N 5 ? 
H N N 6 ? 
I N N 7 ? 
J N N 7 ? 
K N N 2 ? 
L N N 3 ? 
M N N 4 ? 
N N N 5 ? 
O N N 5 ? 
P N N 6 ? 
Q N N 7 ? 
R N N 8 ? 
S N N 8 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
metalc1  metalc ?    ? A DG  8  N7  ? ? ? 1_555 J NI  .  NI  ? ? A DG  8   A NI  108 1_555 ? ? ? ? ? ? ?            2.104 ? 
metalc2  metalc ?    ? B DG  8  N7  ? ? ? 1_555 Q NI  .  NI  ? ? B DG  21  B NI  107 1_555 ? ? ? ? ? ? ?            2.106 ? 
covale1  covale none ? D ARI .  OGL ? ? ? 1_555 E CPH .  C6  ? ? A ARI 102 A CPH 103 1_555 ? ? ? ? ? ? ?            1.491 ? 
metalc3  metalc ?    ? E CPH .  O1  ? ? ? 1_555 I NI  .  NI  ? ? A CPH 103 A NI  107 1_555 ? ? ? ? ? ? ?            2.021 ? 
metalc4  metalc ?    ? E CPH .  O9  ? ? ? 1_555 I NI  .  NI  ? ? A CPH 103 A NI  107 1_555 ? ? ? ? ? ? ?            1.976 ? 
metalc5  metalc ?    ? I NI  .  NI  ? ? ? 1_555 M CPH .  O1  ? ? A NI  107 B CPH 103 1_555 ? ? ? ? ? ? ?            2.038 ? 
metalc6  metalc ?    ? I NI  .  NI  ? ? ? 1_555 M CPH .  O9  ? ? A NI  107 B CPH 103 1_555 ? ? ? ? ? ? ?            1.958 ? 
metalc7  metalc ?    ? I NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  107 A HOH 203 1_555 ? ? ? ? ? ? ?            2.152 ? 
metalc8  metalc ?    ? I NI  .  NI  ? ? ? 1_555 S HOH .  O   ? ? A NI  107 B HOH 207 1_555 ? ? ? ? ? ? ?            2.153 ? 
metalc9  metalc ?    ? J NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  108 A HOH 205 1_555 ? ? ? ? ? ? ?            2.025 ? 
metalc10 metalc ?    ? J NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  108 A HOH 208 1_555 ? ? ? ? ? ? ?            2.096 ? 
metalc11 metalc ?    ? J NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  108 A HOH 219 1_555 ? ? ? ? ? ? ?            1.988 ? 
metalc12 metalc ?    ? J NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  108 A HOH 236 1_555 ? ? ? ? ? ? ?            1.845 ? 
metalc13 metalc ?    ? J NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? A NI  108 A HOH 249 1_555 ? ? ? ? ? ? ?            2.423 ? 
covale2  covale none ? L ARI .  OGL ? ? ? 1_555 M CPH .  C6  ? ? B ARI 102 B CPH 103 1_555 ? ? ? ? ? ? ?            1.492 ? 
covale3  covale none ? O CDR .  C3  ? ? ? 1_555 P ERI .  O1  ? ? B CDR 105 B ERI 106 1_555 ? ? ? ? ? ? ?            1.514 ? 
covale4  covale none ? K 1GL .  O1  ? ? ? 1_555 L ARI .  C3  ? ? B 1GL 101 B ARI 102 1_555 ? ? ? ? ? ? ?            1.552 ? 
covale5  covale none ? C 1GL .  O1  ? ? ? 1_555 D ARI .  C3  ? ? A 1GL 101 A ARI 102 1_555 ? ? ? ? ? ? ?            1.565 ? 
covale6  covale none ? E CPH .  C2  ? ? ? 1_555 F CDR .  OGL ? ? A CPH 103 A CDR 104 1_555 ? ? ? ? ? ? ?            1.569 ? 
covale7  covale none ? G CDR .  C3  ? ? ? 1_555 H ERI .  O1  ? ? A CDR 105 A ERI 106 1_555 ? ? ? ? ? ? ?            1.576 ? 
covale8  covale none ? F CDR .  C3  ? ? ? 1_555 G CDR .  OGL ? ? A CDR 104 A CDR 105 1_555 ? ? ? ? ? ? ?            1.606 ? 
covale9  covale none ? M CPH .  C2  ? ? ? 1_555 N CDR .  OGL ? ? B CPH 103 B CDR 104 1_555 ? ? ? ? ? ? ?            1.607 ? 
covale10 covale none ? N CDR .  C3  ? ? ? 1_555 O CDR .  OGL ? ? B CDR 104 B CDR 105 1_555 ? ? ? ? ? ? ?            1.638 ? 
metalc14 metalc ?    ? Q NI  .  NI  ? ? ? 1_555 S HOH .  O   ? ? B NI  107 B HOH 208 1_555 ? ? ? ? ? ? ?            2.129 ? 
metalc15 metalc ?    ? Q NI  .  NI  ? ? ? 1_555 S HOH .  O   ? ? B NI  107 B HOH 206 1_555 ? ? ? ? ? ? ?            2.119 ? 
metalc16 metalc ?    ? Q NI  .  NI  ? ? ? 1_555 S HOH .  O   ? ? B NI  107 B HOH 222 1_555 ? ? ? ? ? ? ?            2.172 ? 
metalc17 metalc ?    ? Q NI  .  NI  ? ? ? 1_555 S HOH .  O   ? ? B NI  107 B HOH 228 1_555 ? ? ? ? ? ? ?            1.804 ? 
metalc18 metalc ?    ? Q NI  .  NI  ? ? ? 1_555 R HOH .  O   ? ? B NI  107 A HOH 254 6_565 ? ? ? ? ? ? ?            2.334 ? 
hydrog1  hydrog ?    ? A DT  1  N3  ? ? ? 1_555 B DA  13 N7  ? ? A DT  1   B DA  26  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? 
hydrog2  hydrog ?    ? A DT  1  O4  ? ? ? 1_555 B DA  13 N6  ? ? A DT  1   B DA  26  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? 
hydrog3  hydrog ?    ? A DT  2  N3  ? ? ? 1_555 B DA  12 N1  ? ? A DT  2   B DA  25  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog4  hydrog ?    ? A DT  2  O4  ? ? ? 1_555 B DA  12 N6  ? ? A DT  2   B DA  25  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog5  hydrog ?    ? A DC  4  N3  ? ? ? 1_555 B DG  11 N1  ? ? A DC  4   B DG  24  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog6  hydrog ?    ? A DC  4  N4  ? ? ? 1_555 B DG  11 O6  ? ? A DC  4   B DG  24  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog7  hydrog ?    ? A DC  4  O2  ? ? ? 1_555 B DG  11 N2  ? ? A DC  4   B DG  24  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog8  hydrog ?    ? A DG  5  N1  ? ? ? 1_555 B DC  10 N3  ? ? A DG  5   B DC  23  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog9  hydrog ?    ? A DG  5  N2  ? ? ? 1_555 B DC  10 O2  ? ? A DG  5   B DC  23  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog10 hydrog ?    ? A DG  5  O6  ? ? ? 1_555 B DC  10 N4  ? ? A DG  5   B DC  23  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog11 hydrog ?    ? A DG  8  N1  ? ? ? 1_555 B DC  9  N3  ? ? A DG  8   B DC  22  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog12 hydrog ?    ? A DG  8  N2  ? ? ? 1_555 B DC  9  O2  ? ? A DG  8   B DC  22  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog13 hydrog ?    ? A DG  8  O6  ? ? ? 1_555 B DC  9  N4  ? ? A DG  8   B DC  22  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog14 hydrog ?    ? A DC  9  N3  ? ? ? 1_555 B DG  8  N1  ? ? A DC  9   B DG  21  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog15 hydrog ?    ? A DC  9  N4  ? ? ? 1_555 B DG  8  O6  ? ? A DC  9   B DG  21  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog16 hydrog ?    ? A DC  9  O2  ? ? ? 1_555 B DG  8  N2  ? ? A DC  9   B DG  21  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog17 hydrog ?    ? A DC  10 N3  ? ? ? 1_555 B DG  5  N1  ? ? A DC  10  B DG  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog18 hydrog ?    ? A DC  10 N4  ? ? ? 1_555 B DG  5  O6  ? ? A DC  10  B DG  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog19 hydrog ?    ? A DC  10 O2  ? ? ? 1_555 B DG  5  N2  ? ? A DC  10  B DG  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog20 hydrog ?    ? A DG  11 N1  ? ? ? 1_555 B DC  4  N3  ? ? A DG  11  B DC  17  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog21 hydrog ?    ? A DG  11 N2  ? ? ? 1_555 B DC  4  O2  ? ? A DG  11  B DC  17  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog22 hydrog ?    ? A DG  11 O6  ? ? ? 1_555 B DC  4  N4  ? ? A DG  11  B DC  17  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog23 hydrog ?    ? A DA  12 N1  ? ? ? 1_555 B DT  2  N3  ? ? A DA  12  B DT  15  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog24 hydrog ?    ? A DA  12 N6  ? ? ? 1_555 B DT  2  O4  ? ? A DA  12  B DT  15  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? 
hydrog25 hydrog ?    ? A DA  13 N6  ? ? ? 1_555 B DT  1  O4  ? ? A DA  13  B DT  14  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? 
hydrog26 hydrog ?    ? A DA  13 N7  ? ? ? 1_555 B DT  1  N3  ? ? A DA  13  B DT  14  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
covale ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A NI  107 ? 4  'binding site for residue NI A 107'                                     
AC2 Software A NI  108 ? 6  'binding site for residue NI A 108'                                     
AC3 Software B NI  107 ? 6  'binding site for residue NI B 107'                                     
AC4 Software A 1GL 101 ? 28 'binding site for Poly-Saccharide residues 1GL A 101 through ERI A 106' 
AC5 Software B 1GL 101 ? 39 'binding site for Poly-Saccharide residues 1GL B 101 through ERI B 106' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 4  CPH E .  ? CPH A 103 . ? 1_555 ? 
2  AC1 4  HOH R .  ? HOH A 203 . ? 1_555 ? 
3  AC1 4  CPH M .  ? CPH B 103 . ? 1_555 ? 
4  AC1 4  HOH S .  ? HOH B 207 . ? 1_555 ? 
5  AC2 6  DG  A 8  ? DG  A 8   . ? 1_555 ? 
6  AC2 6  HOH R .  ? HOH A 205 . ? 1_555 ? 
7  AC2 6  HOH R .  ? HOH A 208 . ? 1_555 ? 
8  AC2 6  HOH R .  ? HOH A 219 . ? 1_555 ? 
9  AC2 6  HOH R .  ? HOH A 236 . ? 1_555 ? 
10 AC2 6  HOH R .  ? HOH A 249 . ? 1_555 ? 
11 AC3 6  HOH R .  ? HOH A 254 . ? 6_565 ? 
12 AC3 6  DG  B 8  ? DG  B 21  . ? 1_555 ? 
13 AC3 6  HOH S .  ? HOH B 206 . ? 1_555 ? 
14 AC3 6  HOH S .  ? HOH B 208 . ? 1_555 ? 
15 AC3 6  HOH S .  ? HOH B 222 . ? 1_555 ? 
16 AC3 6  HOH S .  ? HOH B 228 . ? 1_555 ? 
17 AC4 28 DG  A 5  ? DG  A 5   . ? 1_555 ? 
18 AC4 28 DC  A 6  ? DC  A 6   . ? 1_555 ? 
19 AC4 28 DC  A 7  ? DC  A 7   . ? 1_555 ? 
20 AC4 28 DG  A 8  ? DG  A 8   . ? 1_555 ? 
21 AC4 28 DC  A 9  ? DC  A 9   . ? 1_555 ? 
22 AC4 28 DC  A 10 ? DC  A 10  . ? 1_555 ? 
23 AC4 28 DG  A 11 ? DG  A 11  . ? 1_555 ? 
24 AC4 28 DA  A 12 ? DA  A 12  . ? 1_555 ? 
25 AC4 28 NI  I .  ? NI  A 107 . ? 1_555 ? 
26 AC4 28 HOH R .  ? HOH A 203 . ? 1_555 ? 
27 AC4 28 HOH R .  ? HOH A 206 . ? 1_555 ? 
28 AC4 28 HOH R .  ? HOH A 207 . ? 1_555 ? 
29 AC4 28 HOH R .  ? HOH A 213 . ? 1_555 ? 
30 AC4 28 HOH R .  ? HOH A 220 . ? 1_555 ? 
31 AC4 28 HOH R .  ? HOH A 223 . ? 6_555 ? 
32 AC4 28 HOH R .  ? HOH A 223 . ? 1_555 ? 
33 AC4 28 HOH R .  ? HOH A 225 . ? 1_555 ? 
34 AC4 28 HOH R .  ? HOH A 229 . ? 1_555 ? 
35 AC4 28 HOH R .  ? HOH A 232 . ? 1_555 ? 
36 AC4 28 HOH R .  ? HOH A 239 . ? 1_555 ? 
37 AC4 28 DG  B 5  ? DG  B 18  . ? 1_555 ? 
38 AC4 28 DC  B 6  ? DC  B 19  . ? 1_555 ? 
39 AC4 28 DC  B 10 ? DC  B 23  . ? 1_555 ? 
40 AC4 28 ARI L .  ? ARI B 102 . ? 1_555 ? 
41 AC4 28 CPH M .  ? CPH B 103 . ? 1_555 ? 
42 AC4 28 CDR O .  ? CDR B 105 . ? 1_555 ? 
43 AC4 28 ERI P .  ? ERI B 106 . ? 1_555 ? 
44 AC4 28 HOH S .  ? HOH B 207 . ? 1_555 ? 
45 AC5 39 DG  A 5  ? DG  A 5   . ? 1_555 ? 
46 AC5 39 DC  A 6  ? DC  A 6   . ? 1_555 ? 
47 AC5 39 DC  A 7  ? DC  A 7   . ? 1_555 ? 
48 AC5 39 DG  A 8  ? DG  A 8   . ? 1_555 ? 
49 AC5 39 DC  A 9  ? DC  A 9   . ? 1_555 ? 
50 AC5 39 DC  A 10 ? DC  A 10  . ? 1_555 ? 
51 AC5 39 DG  A 11 ? DG  A 11  . ? 1_555 ? 
52 AC5 39 DA  A 12 ? DA  A 12  . ? 1_555 ? 
53 AC5 39 NI  I .  ? NI  A 107 . ? 1_555 ? 
54 AC5 39 HOH R .  ? HOH A 203 . ? 1_555 ? 
55 AC5 39 HOH R .  ? HOH A 204 . ? 1_555 ? 
56 AC5 39 HOH R .  ? HOH A 206 . ? 1_555 ? 
57 AC5 39 HOH R .  ? HOH A 207 . ? 1_555 ? 
58 AC5 39 HOH R .  ? HOH A 212 . ? 1_555 ? 
59 AC5 39 HOH R .  ? HOH A 213 . ? 1_555 ? 
60 AC5 39 HOH R .  ? HOH A 218 . ? 1_555 ? 
61 AC5 39 HOH R .  ? HOH A 220 . ? 1_555 ? 
62 AC5 39 HOH R .  ? HOH A 223 . ? 6_555 ? 
63 AC5 39 HOH R .  ? HOH A 223 . ? 1_555 ? 
64 AC5 39 HOH R .  ? HOH A 225 . ? 1_555 ? 
65 AC5 39 HOH R .  ? HOH A 229 . ? 1_555 ? 
66 AC5 39 HOH R .  ? HOH A 232 . ? 1_555 ? 
67 AC5 39 HOH R .  ? HOH A 235 . ? 1_555 ? 
68 AC5 39 HOH R .  ? HOH A 238 . ? 1_555 ? 
69 AC5 39 HOH R .  ? HOH A 239 . ? 1_555 ? 
70 AC5 39 DG  B 5  ? DG  B 18  . ? 1_555 ? 
71 AC5 39 DC  B 6  ? DC  B 19  . ? 1_555 ? 
72 AC5 39 DG  B 8  ? DG  B 21  . ? 1_555 ? 
73 AC5 39 DC  B 9  ? DC  B 22  . ? 1_555 ? 
74 AC5 39 DC  B 10 ? DC  B 23  . ? 1_555 ? 
75 AC5 39 DG  B 11 ? DG  B 24  . ? 1_555 ? 
76 AC5 39 DA  B 12 ? DA  B 25  . ? 1_555 ? 
77 AC5 39 HOH S .  ? HOH B 202 . ? 1_555 ? 
78 AC5 39 HOH S .  ? HOH B 207 . ? 1_555 ? 
79 AC5 39 HOH S .  ? HOH B 210 . ? 1_555 ? 
80 AC5 39 HOH S .  ? HOH B 211 . ? 1_555 ? 
81 AC5 39 HOH S .  ? HOH B 211 . ? 5_454 ? 
82 AC5 39 HOH S .  ? HOH B 221 . ? 1_555 ? 
83 AC5 39 HOH S .  ? HOH B 224 . ? 1_555 ? 
# 
_database_PDB_matrix.entry_id          5ERZ 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.000000 
_database_PDB_matrix.origx_vector[2]   0.000000 
_database_PDB_matrix.origx_vector[3]   0.000000 
# 
_atom_sites.entry_id                    5ERZ 
_atom_sites.fract_transf_matrix[1][1]   0.020708 
_atom_sites.fract_transf_matrix[1][2]   0.011956 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.023911 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.011997 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
N  
NI 
O  
P  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DT 1  1  1  DT DT A . n 
A 1 2  DT 2  2  2  DT DT A . n 
A 1 3  DC 3  3  3  DC DC A . n 
A 1 4  DC 4  4  4  DC DC A . n 
A 1 5  DG 5  5  5  DG DG A . n 
A 1 6  DC 6  6  6  DC DC A . n 
A 1 7  DC 7  7  7  DC DC A . n 
A 1 8  DG 8  8  8  DG DG A . n 
A 1 9  DC 9  9  9  DC DC A . n 
A 1 10 DC 10 10 10 DC DC A . n 
A 1 11 DG 11 11 11 DG DG A . n 
A 1 12 DA 12 12 12 DA DA A . n 
A 1 13 DA 13 13 13 DA DA A . n 
B 1 1  DT 1  14 14 DT DT B . n 
B 1 2  DT 2  15 15 DT DT B . n 
B 1 3  DC 3  16 16 DC DC B . n 
B 1 4  DC 4  17 17 DC DC B . n 
B 1 5  DG 5  18 18 DG DG B . n 
B 1 6  DC 6  19 19 DC DC B . n 
B 1 7  DC 7  20 20 DC DC B . n 
B 1 8  DG 8  21 21 DG DG B . n 
B 1 9  DC 9  22 22 DC DC B . n 
B 1 10 DC 10 23 23 DC DC B . n 
B 1 11 DG 11 24 24 DG DG B . n 
B 1 12 DA 12 25 25 DA DA B . n 
B 1 13 DA 13 26 26 DA DA B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 1GL 1   101 101 1GL 1GL A . 
D 3 ARI 2   102 102 ARI ARI A . 
E 4 CPH 1   103 103 CPH CPH A . 
F 5 CDR 1   104 104 CDR CDR A . 
G 5 CDR 2   105 105 CDR CDR A . 
H 6 ERI 3   106 106 ERI ERI A . 
I 7 NI  1   107 107 NI  NI  A . 
J 7 NI  1   108 108 NI  NI  A . 
K 2 1GL 1   101 101 1GL 1GL B . 
L 3 ARI 2   102 102 ARI ARI B . 
M 4 CPH 1   103 103 CPH CPH B . 
N 5 CDR 1   104 104 CDR CDR B . 
O 5 CDR 2   105 105 CDR CDR B . 
P 6 ERI 3   106 106 ERI ERI B . 
Q 7 NI  1   107 107 NI  NI  B . 
R 8 HOH 1   201 201 HOH HOH A . 
R 8 HOH 2   202 202 HOH HOH A . 
R 8 HOH 3   203 203 HOH HOH A . 
R 8 HOH 4   204 204 HOH HOH A . 
R 8 HOH 5   205 205 HOH HOH A . 
R 8 HOH 6   206 206 HOH HOH A . 
R 8 HOH 7   207 207 HOH HOH A . 
R 8 HOH 8   208 208 HOH HOH A . 
R 8 HOH 9   209 209 HOH HOH A . 
R 8 HOH 10  210 210 HOH HOH A . 
R 8 HOH 11  211 211 HOH HOH A . 
R 8 HOH 12  212 212 HOH HOH A . 
R 8 HOH 13  213 213 HOH HOH A . 
R 8 HOH 14  214 214 HOH HOH A . 
R 8 HOH 15  215 215 HOH HOH A . 
R 8 HOH 16  216 216 HOH HOH A . 
R 8 HOH 17  217 217 HOH HOH A . 
R 8 HOH 18  218 218 HOH HOH A . 
R 8 HOH 19  219 219 HOH HOH A . 
R 8 HOH 20  220 220 HOH HOH A . 
R 8 HOH 21  221 221 HOH HOH A . 
R 8 HOH 22  222 222 HOH HOH A . 
R 8 HOH 23  223 223 HOH HOH A . 
R 8 HOH 24  224 224 HOH HOH A . 
R 8 HOH 25  225 225 HOH HOH A . 
R 8 HOH 26  226 226 HOH HOH A . 
R 8 HOH 27  227 227 HOH HOH A . 
R 8 HOH 28  228 228 HOH HOH A . 
R 8 HOH 29  229 229 HOH HOH A . 
R 8 HOH 30  230 230 HOH HOH A . 
R 8 HOH 31  231 231 HOH HOH A . 
R 8 HOH 32  232 232 HOH HOH A . 
R 8 HOH 33  233 233 HOH HOH A . 
R 8 HOH 34  234 234 HOH HOH A . 
R 8 HOH 35  235 235 HOH HOH A . 
R 8 HOH 36  236 236 HOH HOH A . 
R 8 HOH 37  237 237 HOH HOH A . 
R 8 HOH 38  238 238 HOH HOH A . 
R 8 HOH 39  239 239 HOH HOH A . 
R 8 HOH 40  240 240 HOH HOH A . 
R 8 HOH 41  241 241 HOH HOH A . 
R 8 HOH 42  242 242 HOH HOH A . 
R 8 HOH 43  243 243 HOH HOH A . 
R 8 HOH 44  244 244 HOH HOH A . 
R 8 HOH 45  245 245 HOH HOH A . 
R 8 HOH 46  246 246 HOH HOH A . 
R 8 HOH 47  247 247 HOH HOH A . 
R 8 HOH 48  248 248 HOH HOH A . 
R 8 HOH 49  249 249 HOH HOH A . 
R 8 HOH 50  250 250 HOH HOH A . 
R 8 HOH 51  251 251 HOH HOH A . 
R 8 HOH 52  252 252 HOH HOH A . 
R 8 HOH 53  253 253 HOH HOH A . 
R 8 HOH 54  254 254 HOH HOH A . 
R 8 HOH 55  255 255 HOH HOH A . 
R 8 HOH 56  256 256 HOH HOH A . 
R 8 HOH 57  257 257 HOH HOH A . 
R 8 HOH 58  258 258 HOH HOH A . 
R 8 HOH 59  259 259 HOH HOH A . 
R 8 HOH 60  260 260 HOH HOH A . 
R 8 HOH 61  261 261 HOH HOH A . 
R 8 HOH 62  262 262 HOH HOH A . 
R 8 HOH 63  263 263 HOH HOH A . 
R 8 HOH 64  264 264 HOH HOH A . 
R 8 HOH 65  265 265 HOH HOH A . 
R 8 HOH 66  266 266 HOH HOH A . 
R 8 HOH 67  267 267 HOH HOH A . 
R 8 HOH 68  268 268 HOH HOH A . 
R 8 HOH 69  269 269 HOH HOH A . 
R 8 HOH 70  270 270 HOH HOH A . 
R 8 HOH 71  271 271 HOH HOH A . 
R 8 HOH 72  272 272 HOH HOH A . 
R 8 HOH 73  273 273 HOH HOH A . 
R 8 HOH 74  274 274 HOH HOH A . 
R 8 HOH 75  275 275 HOH HOH A . 
R 8 HOH 76  276 276 HOH HOH A . 
R 8 HOH 77  277 277 HOH HOH A . 
R 8 HOH 78  278 278 HOH HOH A . 
R 8 HOH 79  279 279 HOH HOH A . 
R 8 HOH 80  280 280 HOH HOH A . 
R 8 HOH 81  281 281 HOH HOH A . 
R 8 HOH 82  282 282 HOH HOH A . 
R 8 HOH 83  283 283 HOH HOH A . 
R 8 HOH 84  284 284 HOH HOH A . 
R 8 HOH 85  285 285 HOH HOH A . 
R 8 HOH 86  286 286 HOH HOH A . 
R 8 HOH 87  287 287 HOH HOH A . 
R 8 HOH 88  288 288 HOH HOH A . 
R 8 HOH 89  289 289 HOH HOH A . 
R 8 HOH 90  290 290 HOH HOH A . 
R 8 HOH 91  291 291 HOH HOH A . 
R 8 HOH 92  292 292 HOH HOH A . 
R 8 HOH 93  293 293 HOH HOH A . 
R 8 HOH 94  294 294 HOH HOH A . 
R 8 HOH 95  295 295 HOH HOH A . 
R 8 HOH 96  296 296 HOH HOH A . 
R 8 HOH 97  297 297 HOH HOH A . 
R 8 HOH 98  298 298 HOH HOH A . 
R 8 HOH 99  299 299 HOH HOH A . 
R 8 HOH 100 300 300 HOH HOH A . 
R 8 HOH 101 301 301 HOH HOH A . 
R 8 HOH 102 302 302 HOH HOH A . 
R 8 HOH 103 303 303 HOH HOH A . 
R 8 HOH 104 304 304 HOH HOH A . 
R 8 HOH 105 305 305 HOH HOH A . 
R 8 HOH 106 306 306 HOH HOH A . 
R 8 HOH 107 307 307 HOH HOH A . 
R 8 HOH 108 308 308 HOH HOH A . 
R 8 HOH 109 309 309 HOH HOH A . 
R 8 HOH 110 310 310 HOH HOH A . 
R 8 HOH 111 311 311 HOH HOH A . 
R 8 HOH 112 312 312 HOH HOH A . 
R 8 HOH 113 313 313 HOH HOH A . 
S 8 HOH 1   201 201 HOH HOH B . 
S 8 HOH 2   202 202 HOH HOH B . 
S 8 HOH 3   203 203 HOH HOH B . 
S 8 HOH 4   204 204 HOH HOH B . 
S 8 HOH 5   205 205 HOH HOH B . 
S 8 HOH 6   206 206 HOH HOH B . 
S 8 HOH 7   207 207 HOH HOH B . 
S 8 HOH 8   208 208 HOH HOH B . 
S 8 HOH 9   209 209 HOH HOH B . 
S 8 HOH 10  210 210 HOH HOH B . 
S 8 HOH 11  211 211 HOH HOH B . 
S 8 HOH 12  212 212 HOH HOH B . 
S 8 HOH 13  213 213 HOH HOH B . 
S 8 HOH 14  214 214 HOH HOH B . 
S 8 HOH 15  215 215 HOH HOH B . 
S 8 HOH 16  216 216 HOH HOH B . 
S 8 HOH 17  217 217 HOH HOH B . 
S 8 HOH 18  218 218 HOH HOH B . 
S 8 HOH 19  219 219 HOH HOH B . 
S 8 HOH 20  220 220 HOH HOH B . 
S 8 HOH 21  221 221 HOH HOH B . 
S 8 HOH 22  222 222 HOH HOH B . 
S 8 HOH 23  223 223 HOH HOH B . 
S 8 HOH 24  224 224 HOH HOH B . 
S 8 HOH 25  225 225 HOH HOH B . 
S 8 HOH 26  226 226 HOH HOH B . 
S 8 HOH 27  227 227 HOH HOH B . 
S 8 HOH 28  228 228 HOH HOH B . 
S 8 HOH 29  229 229 HOH HOH B . 
S 8 HOH 30  230 230 HOH HOH B . 
S 8 HOH 31  231 231 HOH HOH B . 
S 8 HOH 32  232 232 HOH HOH B . 
S 8 HOH 33  233 233 HOH HOH B . 
S 8 HOH 34  234 234 HOH HOH B . 
S 8 HOH 35  235 235 HOH HOH B . 
S 8 HOH 36  236 236 HOH HOH B . 
S 8 HOH 37  237 237 HOH HOH B . 
S 8 HOH 38  238 238 HOH HOH B . 
S 8 HOH 39  239 239 HOH HOH B . 
S 8 HOH 40  240 240 HOH HOH B . 
S 8 HOH 41  241 241 HOH HOH B . 
S 8 HOH 42  242 242 HOH HOH B . 
S 8 HOH 43  243 243 HOH HOH B . 
S 8 HOH 44  244 244 HOH HOH B . 
S 8 HOH 45  245 245 HOH HOH B . 
S 8 HOH 46  246 246 HOH HOH B . 
S 8 HOH 47  247 247 HOH HOH B . 
S 8 HOH 48  248 248 HOH HOH B . 
S 8 HOH 49  249 249 HOH HOH B . 
S 8 HOH 50  250 250 HOH HOH B . 
S 8 HOH 51  251 251 HOH HOH B . 
S 8 HOH 52  252 252 HOH HOH B . 
S 8 HOH 53  253 253 HOH HOH B . 
S 8 HOH 54  254 254 HOH HOH B . 
S 8 HOH 55  255 255 HOH HOH B . 
S 8 HOH 56  256 256 HOH HOH B . 
S 8 HOH 57  257 257 HOH HOH B . 
S 8 HOH 58  258 258 HOH HOH B . 
S 8 HOH 59  259 259 HOH HOH B . 
S 8 HOH 60  260 260 HOH HOH B . 
S 8 HOH 61  261 261 HOH HOH B . 
S 8 HOH 62  262 262 HOH HOH B . 
S 8 HOH 63  263 263 HOH HOH B . 
S 8 HOH 64  264 264 HOH HOH B . 
S 8 HOH 65  265 265 HOH HOH B . 
S 8 HOH 66  266 266 HOH HOH B . 
S 8 HOH 67  267 267 HOH HOH B . 
S 8 HOH 68  268 268 HOH HOH B . 
S 8 HOH 69  269 269 HOH HOH B . 
S 8 HOH 70  270 270 HOH HOH B . 
S 8 HOH 71  271 271 HOH HOH B . 
S 8 HOH 72  272 272 HOH HOH B . 
S 8 HOH 73  273 273 HOH HOH B . 
S 8 HOH 74  274 274 HOH HOH B . 
S 8 HOH 75  275 275 HOH HOH B . 
S 8 HOH 76  276 276 HOH HOH B . 
S 8 HOH 77  277 277 HOH HOH B . 
S 8 HOH 78  278 278 HOH HOH B . 
S 8 HOH 79  279 279 HOH HOH B . 
S 8 HOH 80  280 280 HOH HOH B . 
S 8 HOH 81  281 281 HOH HOH B . 
S 8 HOH 82  282 282 HOH HOH B . 
S 8 HOH 83  283 283 HOH HOH B . 
S 8 HOH 84  284 284 HOH HOH B . 
S 8 HOH 85  285 285 HOH HOH B . 
S 8 HOH 86  286 286 HOH HOH B . 
S 8 HOH 87  287 287 HOH HOH B . 
S 8 HOH 88  288 288 HOH HOH B . 
S 8 HOH 89  289 289 HOH HOH B . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 1160 ? 
1 MORE         -21  ? 
1 'SSA (A^2)'  5290 ? 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1 1 A HOH 215 ? R HOH . 
2 1 A HOH 309 ? R HOH . 
3 1 A HOH 311 ? R HOH . 
4 1 B HOH 248 ? S HOH . 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  N7 ? A DG  8 ? A DG  8   ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 205 ? 1_555 95.6  ? 
2  N7 ? A DG  8 ? A DG  8   ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 208 ? 1_555 91.6  ? 
3  O  ? R HOH . ? A HOH 205 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 208 ? 1_555 159.9 ? 
4  N7 ? A DG  8 ? A DG  8   ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 219 ? 1_555 82.8  ? 
5  O  ? R HOH . ? A HOH 205 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 219 ? 1_555 93.5  ? 
6  O  ? R HOH . ? A HOH 208 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 219 ? 1_555 68.8  ? 
7  N7 ? A DG  8 ? A DG  8   ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 236 ? 1_555 93.5  ? 
8  O  ? R HOH . ? A HOH 205 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 236 ? 1_555 85.1  ? 
9  O  ? R HOH . ? A HOH 208 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 236 ? 1_555 113.2 ? 
10 O  ? R HOH . ? A HOH 219 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 236 ? 1_555 175.9 ? 
11 N7 ? A DG  8 ? A DG  8   ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 249 ? 1_555 159.6 ? 
12 O  ? R HOH . ? A HOH 205 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 249 ? 1_555 92.4  ? 
13 O  ? R HOH . ? A HOH 208 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 249 ? 1_555 75.1  ? 
14 O  ? R HOH . ? A HOH 219 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 249 ? 1_555 78.0  ? 
15 O  ? R HOH . ? A HOH 236 ? 1_555 NI ? J NI . ? A NI 108 ? 1_555 O  ? R HOH . ? A HOH 249 ? 1_555 106.0 ? 
16 N7 ? B DG  8 ? B DG  21  ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 208 ? 1_555 90.6  ? 
17 N7 ? B DG  8 ? B DG  21  ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 206 ? 1_555 93.1  ? 
18 O  ? S HOH . ? B HOH 208 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 206 ? 1_555 162.7 ? 
19 N7 ? B DG  8 ? B DG  21  ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 222 ? 1_555 83.8  ? 
20 O  ? S HOH . ? B HOH 208 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 222 ? 1_555 73.8  ? 
21 O  ? S HOH . ? B HOH 206 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 222 ? 1_555 89.8  ? 
22 N7 ? B DG  8 ? B DG  21  ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 228 ? 1_555 92.7  ? 
23 O  ? S HOH . ? B HOH 208 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 228 ? 1_555 115.4 ? 
24 O  ? S HOH . ? B HOH 206 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 228 ? 1_555 81.3  ? 
25 O  ? S HOH . ? B HOH 222 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? S HOH . ? B HOH 228 ? 1_555 170.3 ? 
26 N7 ? B DG  8 ? B DG  21  ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? R HOH . ? A HOH 254 ? 6_565 171.6 ? 
27 O  ? S HOH . ? B HOH 208 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? R HOH . ? A HOH 254 ? 6_565 88.3  ? 
28 O  ? S HOH . ? B HOH 206 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? R HOH . ? A HOH 254 ? 6_565 90.4  ? 
29 O  ? S HOH . ? B HOH 222 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? R HOH . ? A HOH 254 ? 6_565 103.9 ? 
30 O  ? S HOH . ? B HOH 228 ? 1_555 NI ? Q NI . ? B NI 107 ? 1_555 O  ? R HOH . ? A HOH 254 ? 6_565 80.3  ? 
31 O1 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O9 ? E CPH . ? A CPH 103 ? 1_555 88.3  ? 
32 O1 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O1 ? M CPH . ? B CPH 103 ? 1_555 87.8  ? 
33 O9 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O1 ? M CPH . ? B CPH 103 ? 1_555 94.4  ? 
34 O1 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O9 ? M CPH . ? B CPH 103 ? 1_555 94.5  ? 
35 O9 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O9 ? M CPH . ? B CPH 103 ? 1_555 176.9 ? 
36 O1 ? M CPH . ? B CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O9 ? M CPH . ? B CPH 103 ? 1_555 87.1  ? 
37 O1 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? R HOH . ? A HOH 203 ? 1_555 91.2  ? 
38 O9 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? R HOH . ? A HOH 203 ? 1_555 94.1  ? 
39 O1 ? M CPH . ? B CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? R HOH . ? A HOH 203 ? 1_555 171.5 ? 
40 O9 ? M CPH . ? B CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? R HOH . ? A HOH 203 ? 1_555 84.6  ? 
41 O1 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? S HOH . ? B HOH 207 ? 1_555 171.1 ? 
42 O9 ? E CPH . ? A CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? S HOH . ? B HOH 207 ? 1_555 83.0  ? 
43 O1 ? M CPH . ? B CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? S HOH . ? B HOH 207 ? 1_555 90.9  ? 
44 O9 ? M CPH . ? B CPH 103 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? S HOH . ? B HOH 207 ? 1_555 94.2  ? 
45 O  ? R HOH . ? A HOH 203 ? 1_555 NI ? I NI . ? A NI 107 ? 1_555 O  ? S HOH . ? B HOH 207 ? 1_555 91.4  ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2016-11-16 
2 'Structure model' 1 1 2017-07-26 
# 
loop_
_pdbx_audit_revision_details.ordinal 
_pdbx_audit_revision_details.revision_ordinal 
_pdbx_audit_revision_details.data_content_type 
_pdbx_audit_revision_details.provider 
_pdbx_audit_revision_details.type 
_pdbx_audit_revision_details.description 
1 1 'Structure model' repository 'Initial release' ? 
2 2 'Structure model' repository Obsolete          ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' Advisory               
2 2 'Structure model' 'Derived calculations' 
3 2 'Structure model' Other                  
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 2 'Structure model' pdbx_database_PDB_obs_spr 
2 2 'Structure model' pdbx_database_status      
3 2 'Structure model' pdbx_struct_oper_list     
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 2 'Structure model' '_pdbx_database_status.status_code'         
2 2 'Structure model' '_pdbx_database_status.status_code_sf'      
3 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 
# 
loop_
_software.citation_id 
_software.classification 
_software.compiler_name 
_software.compiler_version 
_software.contact_author 
_software.contact_author_email 
_software.date 
_software.description 
_software.dependencies 
_software.hardware 
_software.language 
_software.location 
_software.mods 
_software.name 
_software.os 
_software.os_version 
_software.type 
_software.version 
_software.pdbx_ordinal 
? refinement        ? ? ? ? ? ? ? ? ? ? ? REFMAC      ? ? ? 5.7.0029 1 
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15     2 
? 'data reduction'  ? ? ? ? ? ? ? ? ? ? ? HKL-2000    ? ? ? .        3 
? 'data scaling'    ? ? ? ? ? ? ? ? ? ? ? HKL-2000    ? ? ? .        4 
? phasing           ? ? ? ? ? ? ? ? ? ? ? SHELX       ? ? ? .        5 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 N1    A DT 1  ? ? C2 A DT 1  ? ? 1.452 1.376 0.076  0.008 N 
2 1 C4    A DT 1  ? ? C5 A DT 1  ? ? 1.514 1.445 0.069  0.009 N 
3 1 C2    A DT 1  ? ? O2 A DT 1  ? ? 1.297 1.220 0.077  0.008 N 
4 1 C6    A DT 2  ? ? N1 A DT 2  ? ? 1.334 1.378 -0.044 0.007 N 
5 1 C2    A DT 2  ? ? O2 A DT 2  ? ? 1.274 1.220 0.054  0.008 N 
6 1 "O3'" A DG 5  ? ? P  A DC 6  ? ? 1.530 1.607 -0.077 0.012 Y 
7 1 N1    B DT 14 ? ? C2 B DT 14 ? ? 1.461 1.376 0.085  0.008 N 
8 1 C2    B DT 14 ? ? O2 B DT 14 ? ? 1.286 1.220 0.066  0.008 N 
9 1 "O3'" B DG 18 ? ? P  B DC 19 ? ? 1.532 1.607 -0.075 0.012 Y 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DT 1  ? ? "C1'" A DT 1  ? ? N1  A DT 1  ? ? 111.46 108.30 3.16  0.30 N 
2  1 N1    A DT 1  ? ? C2    A DT 1  ? ? N3  A DT 1  ? ? 119.41 114.60 4.81  0.60 N 
3  1 C2    A DT 1  ? ? N3    A DT 1  ? ? C4  A DT 1  ? ? 119.97 127.20 -7.23 0.60 N 
4  1 N3    A DT 1  ? ? C4    A DT 1  ? ? C5  A DT 1  ? ? 119.78 115.20 4.58  0.60 N 
5  1 C5    A DT 1  ? ? C6    A DT 1  ? ? N1  A DT 1  ? ? 118.75 123.70 -4.95 0.60 N 
6  1 C4    A DT 1  ? ? C5    A DT 1  ? ? C7  A DT 1  ? ? 124.43 119.00 5.43  0.60 N 
7  1 C6    A DT 1  ? ? C5    A DT 1  ? ? C7  A DT 1  ? ? 116.27 122.90 -6.63 0.60 N 
8  1 "O4'" A DT 2  ? ? "C1'" A DT 2  ? ? N1  A DT 2  ? ? 110.98 108.30 2.68  0.30 N 
9  1 C6    A DT 2  ? ? N1    A DT 2  ? ? C2  A DT 2  ? ? 117.17 121.30 -4.13 0.50 N 
10 1 N1    A DT 2  ? ? C2    A DT 2  ? ? N3  A DT 2  ? ? 120.57 114.60 5.97  0.60 N 
11 1 C4    A DT 2  ? ? C5    A DT 2  ? ? C7  A DT 2  ? ? 123.93 119.00 4.93  0.60 N 
12 1 C6    A DT 2  ? ? C5    A DT 2  ? ? C7  A DT 2  ? ? 117.39 122.90 -5.51 0.60 N 
13 1 "O5'" A DG 11 ? ? P     A DG 11 ? ? OP2 A DG 11 ? ? 99.15  105.70 -6.55 0.90 N 
14 1 "O4'" A DA 13 ? ? "C1'" A DA 13 ? ? N9  A DA 13 ? ? 110.69 108.30 2.39  0.30 N 
15 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1  B DT 14 ? ? 114.45 108.30 6.15  0.30 N 
16 1 N1    B DT 14 ? ? C2    B DT 14 ? ? N3  B DT 14 ? ? 119.22 114.60 4.62  0.60 N 
17 1 C2    B DT 14 ? ? N3    B DT 14 ? ? C4  B DT 14 ? ? 120.57 127.20 -6.63 0.60 N 
18 1 N3    B DT 14 ? ? C4    B DT 14 ? ? C5  B DT 14 ? ? 119.28 115.20 4.08  0.60 N 
19 1 C5    B DT 14 ? ? C6    B DT 14 ? ? N1  B DT 14 ? ? 120.07 123.70 -3.63 0.60 N 
20 1 C5    B DT 14 ? ? C4    B DT 14 ? ? O4  B DT 14 ? ? 119.03 124.90 -5.87 0.70 N 
21 1 C4    B DT 14 ? ? C5    B DT 14 ? ? C7  B DT 14 ? ? 123.46 119.00 4.46  0.60 N 
22 1 C6    B DT 14 ? ? C5    B DT 14 ? ? C7  B DT 14 ? ? 117.05 122.90 -5.85 0.60 N 
23 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1  B DT 15 ? ? 119.05 108.30 10.75 0.30 N 
24 1 N1    B DT 15 ? ? C2    B DT 15 ? ? N3  B DT 15 ? ? 118.88 114.60 4.28  0.60 N 
25 1 C2    B DT 15 ? ? N3    B DT 15 ? ? C4  B DT 15 ? ? 121.86 127.20 -5.34 0.60 N 
26 1 N3    B DT 15 ? ? C4    B DT 15 ? ? C5  B DT 15 ? ? 119.76 115.20 4.56  0.60 N 
27 1 C5    B DT 15 ? ? C4    B DT 15 ? ? O4  B DT 15 ? ? 117.59 124.90 -7.31 0.70 N 
28 1 C4    B DT 15 ? ? C5    B DT 15 ? ? C7  B DT 15 ? ? 122.79 119.00 3.79  0.60 N 
# 
loop_
_pdbx_distant_solvent_atoms.id 
_pdbx_distant_solvent_atoms.PDB_model_num 
_pdbx_distant_solvent_atoms.auth_atom_id 
_pdbx_distant_solvent_atoms.label_alt_id 
_pdbx_distant_solvent_atoms.auth_asym_id 
_pdbx_distant_solvent_atoms.auth_comp_id 
_pdbx_distant_solvent_atoms.auth_seq_id 
_pdbx_distant_solvent_atoms.PDB_ins_code 
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 
_pdbx_distant_solvent_atoms.neighbor_ligand_distance 
1  1 O ? A HOH 304 ? 6.12 .    
2  1 O ? A HOH 305 ? 6.24 .    
3  1 O ? A HOH 306 ? .    6.93 
4  1 O ? A HOH 307 ? 7.00 .    
5  1 O ? A HOH 308 ? 7.38 .    
6  1 O ? A HOH 309 ? .    7.75 
7  1 O ? A HOH 310 ? .    8.30 
8  1 O ? A HOH 311 ? 8.33 .    
9  1 O ? A HOH 312 ? .    8.74 
10 1 O ? A HOH 313 ? 8.89 .    
11 1 O ? B HOH 282 ? 6.17 .    
12 1 O ? B HOH 283 ? 6.41 .    
13 1 O ? B HOH 284 ? 7.04 .    
14 1 O ? B HOH 285 ? 7.73 .    
15 1 O ? B HOH 286 ? .    7.76 
16 1 O ? B HOH 287 ? 8.08 .    
17 1 O ? B HOH 288 ? .    8.87 
18 1 O ? B HOH 289 ? 9.56 .    
# 
_ndb_struct_conf_na.entry_id   5ERZ 
_ndb_struct_conf_na.feature    'double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DT 1  1_555 B DA 13 1_555 -0.714 3.634  0.669  -15.516 10.288  -68.067 1  A_DT1:DA26_B  A 1  ? B 26 ? 23 3 
1 A DT 2  1_555 B DA 12 1_555 -0.297 -0.124 -0.151 -1.038  -6.805  -5.206  2  A_DT2:DA25_B  A 2  ? B 25 ? 20 1 
1 A DC 4  1_555 B DG 11 1_555 0.292  -0.368 -0.307 6.563   -13.805 -0.617  3  A_DC4:DG24_B  A 4  ? B 24 ? 19 1 
1 A DG 5  1_555 B DC 10 1_555 -0.040 -0.144 -0.042 1.955   -13.777 0.861   4  A_DG5:DC23_B  A 5  ? B 23 ? 19 1 
1 A DG 8  1_555 B DC 9  1_555 -0.301 -0.137 0.082  1.209   -9.949  -0.145  5  A_DG8:DC22_B  A 8  ? B 22 ? 19 1 
1 A DC 9  1_555 B DG 8  1_555 0.269  -0.131 0.109  -2.242  -8.925  0.184   6  A_DC9:DG21_B  A 9  ? B 21 ? 19 1 
1 A DC 10 1_555 B DG 5  1_555 0.052  -0.140 0.054  -1.893  -13.330 1.462   7  A_DC10:DG18_B A 10 ? B 18 ? 19 1 
1 A DG 11 1_555 B DC 4  1_555 -0.200 -0.246 -0.332 -7.381  -11.601 0.721   8  A_DG11:DC17_B A 11 ? B 17 ? 19 1 
1 A DA 12 1_555 B DT 2  1_555 0.632  -0.214 0.178  2.845   3.813   -9.880  9  A_DA12:DT15_B A 12 ? B 15 ? 20 1 
1 A DA 13 1_555 B DT 1  1_555 1.009  -3.578 -0.605 16.647  -8.091  71.355  10 A_DA13:DT14_B A 13 ? B 14 ? 23 3 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DT 1  1_555 B DA 13 1_555 A DT 2  1_555 B DA 12 1_555 -0.767 3.129  3.318  3.115   -0.203  -19.034  -9.233 -0.668 3.430  0.610 
9.339  -19.286  1 AA_DT1DT2:DA25DA26_BB   A 1  ? B 26 ? A 2  ? B 25 ? 
1 A DT 2  1_555 B DA 12 1_555 A DC 4  1_555 B DG 11 1_555 0.471  -0.141 3.243  4.217   -1.915  33.966   0.062  -0.135 3.279  
-3.260 -7.177 34.271   2 AA_DT2DC4:DG24DA25_BB   A 2  ? B 25 ? A 4  ? B 24 ? 
1 A DC 4  1_555 B DG 11 1_555 A DG 5  1_555 B DC 10 1_555 0.672  0.369  3.586  -1.685  8.551   36.524   -0.663 -1.288 3.546  
13.410 2.643  37.515   3 AA_DC4DG5:DC23DG24_BB   A 4  ? B 24 ? A 5  ? B 23 ? 
1 A DG 5  1_555 B DC 10 1_555 A DG 8  1_555 B DC 9  1_555 1.888  -1.941 3.236  -1.002  10.953  18.755   -8.694 -5.335 1.742  
30.451 2.787  21.717   4 AA_DG5DG8:DC22DC23_BB   A 5  ? B 23 ? A 8  ? B 22 ? 
1 A DG 8  1_555 B DC 9  1_555 A DC 9  1_555 B DG 8  1_555 0.007  -2.035 3.476  -0.425  -5.388  36.803   -2.398 -0.073 3.726  
-8.478 0.668  37.184   5 AA_DG8DC9:DG21DC22_BB   A 8  ? B 22 ? A 9  ? B 21 ? 
1 A DC 9  1_555 B DG 8  1_555 A DC 10 1_555 B DG 5  1_555 -1.899 -1.991 3.157  0.282   11.463  18.897   -8.683 5.045  1.658  
31.439 -0.772 22.077   6 AA_DC9DC10:DG18DG21_BB  A 9  ? B 21 ? A 10 ? B 18 ? 
1 A DC 10 1_555 B DG 5  1_555 A DG 11 1_555 B DC 4  1_555 -0.665 0.376  3.581  2.657   7.059   37.451   -0.405 1.385  3.537  
10.859 -4.087 38.176   7 AA_DC10DG11:DC17DG18_BB A 10 ? B 18 ? A 11 ? B 17 ? 
1 A DG 11 1_555 B DC 4  1_555 A DA 12 1_555 B DT 2  1_555 -0.395 -0.022 3.137  -4.719  -5.372  38.105   0.603  0.037  3.137  
-8.141 7.151  38.746   8 AA_DG11DA12:DT15DC17_BB A 11 ? B 17 ? A 12 ? B 15 ? 
1 A DA 12 1_555 B DT 2  1_555 A DA 13 1_555 B DT 1  1_555 -2.088 3.873  -1.570 171.562 -31.598 -152.233 -1.963 -1.190 -0.863 
15.814 85.861 -178.668 9 AA_DA12DA13:DT14DT15_BB A 12 ? B 15 ? A 13 ? B 14 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 4-O-METHYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE                                                                      1GL 
3 '[O4]-ACETOXY-2,3-DIDEOXYFUCOSE'                                                                                         ARI 
4 '(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' CPH 
5 2,3-DIDEOXYFUCOSE                                                                                                        CDR 
6 4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE                                                            ERI 
7 'NICKEL (II) ION'                                                                                                        NI  
8 water                                                                                                                    HOH 
#