HEADER TRANSFERASE 17-NOV-15 5ETA TITLE STRUCTURE OF MAPK14 WITH BOUND THE KIM DOMAIN OF THE TOXOPLASMA TITLE 2 PROTEIN GRA24 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 14; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: MAPK 14,CYTOKINE SUPPRESSIVE ANTI-INFLAMMATORY DRUG-BINDING COMPND 5 PROTEIN,CSBP,MAP KINASE MXI2,MAX-INTERACTING PROTEIN 2,MITOGEN- COMPND 6 ACTIVATED PROTEIN KINASE P38 ALPHA,MAP KINASE P38 ALPHA,STRESS- COMPND 7 ACTIVATED PROTEIN KINASE 2A,SAPK2A; COMPND 8 EC: 2.7.11.24; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: PUTATIVE TRANSMEMBRANE PROTEIN; COMPND 12 CHAIN: D, C; COMPND 13 FRAGMENT: UNP RESIDUES 440-455; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: PEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK14, CSBP, CSBP1, CSBP2, CSPB1, MXI2, SAPK2A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 11 ORGANISM_TAXID: 5811 KEYWDS MAPK14, GRA24, KIM DOMAIN, PEPTIDE-PROTEIN COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.PELLEGRINI,A.PALENCIA,L.BRAUN,U.KAPP,A.BOUGDOUR,H.BELRHALI, AUTHOR 2 M.W.BOWLER,M.HAKIMI REVDAT 5 13-NOV-24 5ETA 1 REMARK REVDAT 4 20-FEB-19 5ETA 1 REMARK LINK REVDAT 3 18-JAN-17 5ETA 1 JRNL REVDAT 2 07-DEC-16 5ETA 1 JRNL REVDAT 1 26-OCT-16 5ETA 0 JRNL AUTH E.PELLEGRINI,A.PALENCIA,L.BRAUN,U.KAPP,A.BOUGDOUR, JRNL AUTH 2 H.BELRHALI,M.W.BOWLER,M.A.HAKIMI JRNL TITL STRUCTURAL BASIS FOR THE SUBVERSION OF MAP KINASE SIGNALING JRNL TITL 2 BY AN INTRINSICALLY DISORDERED PARASITE SECRETED AGONIST. JRNL REF STRUCTURE V. 25 16 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 27889209 JRNL DOI 10.1016/J.STR.2016.10.011 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 18997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1364 - 5.3526 0.95 2540 152 0.1859 0.2591 REMARK 3 2 5.3526 - 4.2500 0.96 2580 129 0.1719 0.2336 REMARK 3 3 4.2500 - 3.7132 0.96 2528 144 0.1879 0.2520 REMARK 3 4 3.7132 - 3.3739 0.96 2624 122 0.2285 0.3401 REMARK 3 5 3.3739 - 3.1322 0.97 2566 146 0.2769 0.3364 REMARK 3 6 3.1322 - 2.9476 0.97 2603 135 0.3059 0.3646 REMARK 3 7 2.9476 - 2.8000 0.97 2573 155 0.3355 0.4135 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5805 REMARK 3 ANGLE : 0.962 7877 REMARK 3 CHIRALITY : 0.057 885 REMARK 3 PLANARITY : 0.007 1007 REMARK 3 DIHEDRAL : 8.766 5470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -0.6212 9.6315 -17.2115 REMARK 3 T TENSOR REMARK 3 T11: 0.2654 T22: 0.3720 REMARK 3 T33: 0.3163 T12: 0.0067 REMARK 3 T13: 0.0081 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.1886 L22: 1.2219 REMARK 3 L33: 0.1021 L12: 0.0629 REMARK 3 L13: 0.0394 L23: -0.6299 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: -0.0266 S13: 0.0175 REMARK 3 S21: -0.0371 S22: 0.0401 S23: -0.1045 REMARK 3 S31: 0.0268 S32: 0.0100 S33: -0.0131 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ETA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43826 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 45.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1M TRIS/HCL PH 8.5, 25 REMARK 280 -28% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 171 REMARK 465 ALA B 172 REMARK 465 ARG B 173 REMARK 465 HIS B 174 REMARK 465 THR B 175 REMARK 465 ASP B 176 REMARK 465 ASP B 177 REMARK 465 GLU B 178 REMARK 465 MET B 179 REMARK 465 THR B 180 REMARK 465 GLY B 181 REMARK 465 TYR B 182 REMARK 465 VAL B 183 REMARK 465 ALA B 184 REMARK 465 THR B 185 REMARK 465 ASP B 354 REMARK 465 GLN B 355 REMARK 465 GLU B 356 REMARK 465 GLU B 357 REMARK 465 MET B 358 REMARK 465 GLU B 359 REMARK 465 SER B 360 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 LEU A 171 REMARK 465 ALA A 172 REMARK 465 ARG A 173 REMARK 465 HIS A 174 REMARK 465 THR A 175 REMARK 465 ASP A 176 REMARK 465 ASP A 177 REMARK 465 GLU A 178 REMARK 465 MET A 179 REMARK 465 THR A 180 REMARK 465 GLY A 181 REMARK 465 TYR A 182 REMARK 465 VAL A 183 REMARK 465 ALA A 184 REMARK 465 THR A 185 REMARK 465 GLN A 355 REMARK 465 GLU A 356 REMARK 465 GLU A 357 REMARK 465 MET A 358 REMARK 465 GLU A 359 REMARK 465 SER A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 129 OE1 GLN A 133 1.50 REMARK 500 OD2 ASP A 227 CB ASP A 230 1.57 REMARK 500 OD1 ASP A 227 N ASP A 230 1.92 REMARK 500 O TYR B 323 O HOH B 401 2.15 REMARK 500 OD1 ASP A 227 N ILE A 229 2.18 REMARK 500 O ARG B 149 NH1 ARG B 189 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 12 CD1 LEU A 353 1665 1.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE B 223 C PRO B 224 N 0.124 REMARK 500 PHE A 223 C PRO A 224 N 0.147 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 117 CG1 - CB - CG2 ANGL. DEV. = -18.3 DEGREES REMARK 500 ASP A 150 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 ASP A 227 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 ASP A 227 N - CA - C ANGL. DEV. = -17.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 14 25.45 80.51 REMARK 500 ASN B 100 -66.92 -136.26 REMARK 500 ARG B 149 -11.57 72.72 REMARK 500 ASP B 168 76.86 57.65 REMARK 500 THR B 226 -65.50 -93.82 REMARK 500 LEU B 238 -60.94 -90.04 REMARK 500 GLN B 260 -79.99 -70.15 REMARK 500 GLU B 317 73.02 -110.63 REMARK 500 ASN A 14 123.82 -29.97 REMARK 500 VAL A 30 -125.28 41.62 REMARK 500 TYR A 35 -8.76 77.19 REMARK 500 ASN A 100 -66.41 -134.79 REMARK 500 ASP A 150 24.26 89.46 REMARK 500 ASP A 168 75.46 57.41 REMARK 500 THR A 226 -69.11 -93.92 REMARK 500 LEU A 238 -60.76 -92.98 REMARK 500 GLU A 317 73.88 -111.37 REMARK 500 LEU A 353 -174.57 -67.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TRP B 197 MET B 198 -138.59 REMARK 500 ASN A 14 LYS A 15 -83.61 REMARK 500 GLN A 264 MET A 265 149.28 REMARK 500 REMARK 500 REMARK: NULL DBREF 5ETA B 1 360 UNP Q16539 MK14_HUMAN 1 360 DBREF1 5ETA D -2 13 UNP A0A086L2F3_TOXGO DBREF2 5ETA D A0A086L2F3 440 455 DBREF 5ETA A 1 360 UNP Q16539 MK14_HUMAN 1 360 DBREF1 5ETA C -2 13 UNP A0A086L2F3_TOXGO DBREF2 5ETA C A0A086L2F3 440 455 SEQRES 1 B 360 MET SER GLN GLU ARG PRO THR PHE TYR ARG GLN GLU LEU SEQRES 2 B 360 ASN LYS THR ILE TRP GLU VAL PRO GLU ARG TYR GLN ASN SEQRES 3 B 360 LEU SER PRO VAL GLY SER GLY ALA TYR GLY SER VAL CYS SEQRES 4 B 360 ALA ALA PHE ASP THR LYS THR GLY LEU ARG VAL ALA VAL SEQRES 5 B 360 LYS LYS LEU SER ARG PRO PHE GLN SER ILE ILE HIS ALA SEQRES 6 B 360 LYS ARG THR TYR ARG GLU LEU ARG LEU LEU LYS HIS MET SEQRES 7 B 360 LYS HIS GLU ASN VAL ILE GLY LEU LEU ASP VAL PHE THR SEQRES 8 B 360 PRO ALA ARG SER LEU GLU GLU PHE ASN ASP VAL TYR LEU SEQRES 9 B 360 VAL THR HIS LEU MET GLY ALA ASP LEU ASN ASN ILE VAL SEQRES 10 B 360 LYS CYS GLN LYS LEU THR ASP ASP HIS VAL GLN PHE LEU SEQRES 11 B 360 ILE TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SER SEQRES 12 B 360 ALA ASP ILE ILE HIS ARG ASP LEU LYS PRO SER ASN LEU SEQRES 13 B 360 ALA VAL ASN GLU ASP CYS GLU LEU LYS ILE LEU ASP PHE SEQRES 14 B 360 GLY LEU ALA ARG HIS THR ASP ASP GLU MET THR GLY TYR SEQRES 15 B 360 VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET LEU SEQRES 16 B 360 ASN TRP MET HIS TYR ASN GLN THR VAL ASP ILE TRP SER SEQRES 17 B 360 VAL GLY CYS ILE MET ALA GLU LEU LEU THR GLY ARG THR SEQRES 18 B 360 LEU PHE PRO GLY THR ASP HIS ILE ASP GLN LEU LYS LEU SEQRES 19 B 360 ILE LEU ARG LEU VAL GLY THR PRO GLY ALA GLU LEU LEU SEQRES 20 B 360 LYS LYS ILE SER SER GLU SER ALA ARG ASN TYR ILE GLN SEQRES 21 B 360 SER LEU THR GLN MET PRO LYS MET ASN PHE ALA ASN VAL SEQRES 22 B 360 PHE ILE GLY ALA ASN PRO LEU ALA VAL ASP LEU LEU GLU SEQRES 23 B 360 LYS MET LEU VAL LEU ASP SER ASP LYS ARG ILE THR ALA SEQRES 24 B 360 ALA GLN ALA LEU ALA HIS ALA TYR PHE ALA GLN TYR HIS SEQRES 25 B 360 ASP PRO ASP ASP GLU PRO VAL ALA ASP PRO TYR ASP GLN SEQRES 26 B 360 SER PHE GLU SER ARG ASP LEU LEU ILE ASP GLU TRP LYS SEQRES 27 B 360 SER LEU THR TYR ASP GLU VAL ILE SER PHE VAL PRO PRO SEQRES 28 B 360 PRO LEU ASP GLN GLU GLU MET GLU SER SEQRES 1 D 16 GLY LEU LEU GLU ARG ARG GLY VAL SER GLU LEU PRO PRO SEQRES 2 D 16 LEU TYR ILE SEQRES 1 A 360 MET SER GLN GLU ARG PRO THR PHE TYR ARG GLN GLU LEU SEQRES 2 A 360 ASN LYS THR ILE TRP GLU VAL PRO GLU ARG TYR GLN ASN SEQRES 3 A 360 LEU SER PRO VAL GLY SER GLY ALA TYR GLY SER VAL CYS SEQRES 4 A 360 ALA ALA PHE ASP THR LYS THR GLY LEU ARG VAL ALA VAL SEQRES 5 A 360 LYS LYS LEU SER ARG PRO PHE GLN SER ILE ILE HIS ALA SEQRES 6 A 360 LYS ARG THR TYR ARG GLU LEU ARG LEU LEU LYS HIS MET SEQRES 7 A 360 LYS HIS GLU ASN VAL ILE GLY LEU LEU ASP VAL PHE THR SEQRES 8 A 360 PRO ALA ARG SER LEU GLU GLU PHE ASN ASP VAL TYR LEU SEQRES 9 A 360 VAL THR HIS LEU MET GLY ALA ASP LEU ASN ASN ILE VAL SEQRES 10 A 360 LYS CYS GLN LYS LEU THR ASP ASP HIS VAL GLN PHE LEU SEQRES 11 A 360 ILE TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SER SEQRES 12 A 360 ALA ASP ILE ILE HIS ARG ASP LEU LYS PRO SER ASN LEU SEQRES 13 A 360 ALA VAL ASN GLU ASP CYS GLU LEU LYS ILE LEU ASP PHE SEQRES 14 A 360 GLY LEU ALA ARG HIS THR ASP ASP GLU MET THR GLY TYR SEQRES 15 A 360 VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET LEU SEQRES 16 A 360 ASN TRP MET HIS TYR ASN GLN THR VAL ASP ILE TRP SER SEQRES 17 A 360 VAL GLY CYS ILE MET ALA GLU LEU LEU THR GLY ARG THR SEQRES 18 A 360 LEU PHE PRO GLY THR ASP HIS ILE ASP GLN LEU LYS LEU SEQRES 19 A 360 ILE LEU ARG LEU VAL GLY THR PRO GLY ALA GLU LEU LEU SEQRES 20 A 360 LYS LYS ILE SER SER GLU SER ALA ARG ASN TYR ILE GLN SEQRES 21 A 360 SER LEU THR GLN MET PRO LYS MET ASN PHE ALA ASN VAL SEQRES 22 A 360 PHE ILE GLY ALA ASN PRO LEU ALA VAL ASP LEU LEU GLU SEQRES 23 A 360 LYS MET LEU VAL LEU ASP SER ASP LYS ARG ILE THR ALA SEQRES 24 A 360 ALA GLN ALA LEU ALA HIS ALA TYR PHE ALA GLN TYR HIS SEQRES 25 A 360 ASP PRO ASP ASP GLU PRO VAL ALA ASP PRO TYR ASP GLN SEQRES 26 A 360 SER PHE GLU SER ARG ASP LEU LEU ILE ASP GLU TRP LYS SEQRES 27 A 360 SER LEU THR TYR ASP GLU VAL ILE SER PHE VAL PRO PRO SEQRES 28 A 360 PRO LEU ASP GLN GLU GLU MET GLU SER SEQRES 1 C 16 GLY LEU LEU GLU ARG ARG GLY VAL SER GLU LEU PRO PRO SEQRES 2 C 16 LEU TYR ILE FORMUL 5 HOH *13(H2 O) HELIX 1 AA1 SER B 61 MET B 78 1 18 HELIX 2 AA2 SER B 95 PHE B 99 5 5 HELIX 3 AA3 LEU B 113 GLN B 120 1 8 HELIX 4 AA4 THR B 123 ALA B 144 1 22 HELIX 5 AA5 LYS B 152 SER B 154 5 3 HELIX 6 AA6 ALA B 190 LEU B 195 1 6 HELIX 7 AA7 GLN B 202 GLY B 219 1 18 HELIX 8 AA8 ASP B 227 GLY B 240 1 14 HELIX 9 AA9 GLY B 243 LYS B 248 1 6 HELIX 10 AB1 SER B 252 TYR B 258 1 7 HELIX 11 AB2 ASN B 269 PHE B 274 1 6 HELIX 12 AB3 ASN B 278 LEU B 289 1 12 HELIX 13 AB4 ASP B 292 ARG B 296 5 5 HELIX 14 AB5 THR B 298 ALA B 304 1 7 HELIX 15 AB6 HIS B 305 ALA B 309 5 5 HELIX 16 AB7 ASP B 313 GLU B 317 5 5 HELIX 17 AB8 GLN B 325 ARG B 330 5 6 HELIX 18 AB9 LEU B 333 SER B 347 1 15 HELIX 19 AC1 LEU D -1 ARG D 3 1 5 HELIX 20 AC2 SER A 61 MET A 78 1 18 HELIX 21 AC3 SER A 95 PHE A 99 5 5 HELIX 22 AC4 LEU A 113 GLN A 120 1 8 HELIX 23 AC5 THR A 123 ALA A 144 1 22 HELIX 24 AC6 LYS A 152 SER A 154 5 3 HELIX 25 AC7 ALA A 190 LEU A 195 1 6 HELIX 26 AC8 THR A 203 GLY A 219 1 17 HELIX 27 AC9 ASP A 227 GLY A 240 1 14 HELIX 28 AD1 GLY A 243 LYS A 249 1 7 HELIX 29 AD2 SER A 252 TYR A 258 1 7 HELIX 30 AD3 ILE A 259 LEU A 262 5 4 HELIX 31 AD4 ASN A 269 VAL A 273 5 5 HELIX 32 AD5 ASN A 278 LEU A 289 1 12 HELIX 33 AD6 ASP A 292 ARG A 296 5 5 HELIX 34 AD7 THR A 298 ALA A 304 1 7 HELIX 35 AD8 HIS A 305 ALA A 309 5 5 HELIX 36 AD9 ASP A 313 GLU A 317 5 5 HELIX 37 AE1 GLN A 325 ARG A 330 5 6 HELIX 38 AE2 LEU A 333 SER A 347 1 15 HELIX 39 AE3 LEU C -1 ARG C 3 1 5 SHEET 1 AA1 2 PHE B 8 LEU B 13 0 SHEET 2 AA1 2 THR B 16 PRO B 21 -1 O THR B 16 N LEU B 13 SHEET 1 AA2 5 TYR B 24 GLY B 31 0 SHEET 2 AA2 5 SER B 37 ASP B 43 -1 O ALA B 40 N SER B 28 SHEET 3 AA2 5 LEU B 48 LEU B 55 -1 O LEU B 48 N ASP B 43 SHEET 4 AA2 5 VAL B 102 HIS B 107 -1 O VAL B 102 N LEU B 55 SHEET 5 AA2 5 ASP B 88 PHE B 90 -1 N ASP B 88 O VAL B 105 SHEET 1 AA3 3 ALA B 111 ASP B 112 0 SHEET 2 AA3 3 LEU B 156 VAL B 158 -1 O VAL B 158 N ALA B 111 SHEET 3 AA3 3 LEU B 164 ILE B 166 -1 O LYS B 165 N ALA B 157 SHEET 1 AA4 2 PHE A 8 LEU A 13 0 SHEET 2 AA4 2 THR A 16 PRO A 21 -1 O THR A 16 N LEU A 13 SHEET 1 AA5 5 TYR A 24 SER A 28 0 SHEET 2 AA5 5 SER A 37 ASP A 43 -1 O PHE A 42 N GLN A 25 SHEET 3 AA5 5 LEU A 48 LEU A 55 -1 O VAL A 52 N CYS A 39 SHEET 4 AA5 5 VAL A 102 HIS A 107 -1 O THR A 106 N ALA A 51 SHEET 5 AA5 5 LEU A 86 PHE A 90 -1 N PHE A 90 O TYR A 103 SHEET 1 AA6 3 ALA A 111 ASP A 112 0 SHEET 2 AA6 3 LEU A 156 VAL A 158 -1 O VAL A 158 N ALA A 111 SHEET 3 AA6 3 LEU A 164 ILE A 166 -1 O LYS A 165 N ALA A 157 SSBOND 1 CYS B 119 CYS A 119 1555 1555 2.03 CISPEP 1 ASN B 14 LYS B 15 0 -28.30 CISPEP 2 TYR D 12 ILE D 13 0 17.30 CRYST1 52.091 61.900 75.671 105.62 96.31 114.65 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019197 0.008809 0.005543 0.00000 SCALE2 0.000000 0.017775 0.006616 0.00000 SCALE3 0.000000 0.000000 0.014187 0.00000