HEADER HYDROLASE 19-NOV-15 5EVD TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 IN COMPLEX WITH THE TITLE 2 BISTHIAZOLIDINE INHIBITOR D-VC26 COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO-BETA-LACTAMASE L1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-LACTAMASE TYPE II,PENICILLINASE; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS MALTOPHILIA; SOURCE 4 ORGANISM_TAXID: 40324; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: SOLU; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: POPIN-F KEYWDS INHIBITOR, CARBAPENEMASE, ANTIBIOTIC RESISTANCE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.HINCHLIFFE,J.SPENCER REVDAT 5 10-JAN-24 5EVD 1 REMARK REVDAT 4 30-MAR-22 5EVD 1 REMARK REVDAT 3 14-APR-21 5EVD 1 REMARK LINK REVDAT 2 20-JUL-16 5EVD 1 JRNL REVDAT 1 01-JUN-16 5EVD 0 JRNL AUTH P.HINCHLIFFE,M.M.GONZALEZ,M.F.MOJICA,J.M.GONZALEZ, JRNL AUTH 2 V.CASTILLO,C.SAIZ,M.KOSMOPOULOU,C.L.TOOKE,L.I.LLARRULL, JRNL AUTH 3 G.MAHLER,R.A.BONOMO,A.J.VILA,J.SPENCER JRNL TITL CROSS-CLASS METALLO-BETA-LACTAMASE INHIBITION BY JRNL TITL 2 BISTHIAZOLIDINES REVEALS MULTIPLE BINDING MODES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 E3745 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27303030 JRNL DOI 10.1073/PNAS.1601368113 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.3527 - 3.8756 1.00 3086 166 0.1499 0.1899 REMARK 3 2 3.8756 - 3.0771 1.00 2934 150 0.1443 0.1775 REMARK 3 3 3.0771 - 2.6884 1.00 2895 135 0.1644 0.1684 REMARK 3 4 2.6884 - 2.4427 1.00 2845 158 0.1658 0.1982 REMARK 3 5 2.4427 - 2.2677 1.00 2858 149 0.1692 0.2071 REMARK 3 6 2.2677 - 2.1341 1.00 2861 119 0.1721 0.1922 REMARK 3 7 2.1341 - 2.0272 1.00 2808 147 0.1833 0.2105 REMARK 3 8 2.0272 - 1.9390 1.00 2863 122 0.1881 0.2326 REMARK 3 9 1.9390 - 1.8643 1.00 2792 162 0.2161 0.2453 REMARK 3 10 1.8643 - 1.8000 1.00 2795 158 0.2507 0.2550 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2091 REMARK 3 ANGLE : 1.048 2860 REMARK 3 CHIRALITY : 0.048 317 REMARK 3 PLANARITY : 0.006 375 REMARK 3 DIHEDRAL : 12.596 739 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4764 24.2492 -14.9638 REMARK 3 T TENSOR REMARK 3 T11: 0.3464 T22: 0.3678 REMARK 3 T33: 0.2186 T12: 0.1289 REMARK 3 T13: -0.0451 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 5.0654 L22: 3.1394 REMARK 3 L33: 1.6148 L12: 3.8191 REMARK 3 L13: -0.9335 L23: -1.1851 REMARK 3 S TENSOR REMARK 3 S11: -0.0838 S12: -0.5126 S13: -0.2937 REMARK 3 S21: -0.0771 S22: -0.0088 S23: -0.1170 REMARK 3 S31: 0.2948 S32: 0.7661 S33: 0.0675 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.0790 20.3044 -6.7462 REMARK 3 T TENSOR REMARK 3 T11: 0.3296 T22: 0.1909 REMARK 3 T33: 0.2354 T12: -0.0720 REMARK 3 T13: -0.1303 T23: 0.0588 REMARK 3 L TENSOR REMARK 3 L11: 1.5233 L22: 0.8995 REMARK 3 L33: 2.0903 L12: 0.3301 REMARK 3 L13: -0.4785 L23: -0.0851 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: 0.0200 S13: 0.0149 REMARK 3 S21: -0.2416 S22: 0.1708 S23: 0.2124 REMARK 3 S31: 0.5002 S32: -0.1189 S33: -0.1749 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6700 28.6593 -9.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.2514 T22: 0.2306 REMARK 3 T33: 0.2619 T12: -0.0744 REMARK 3 T13: -0.1190 T23: 0.1135 REMARK 3 L TENSOR REMARK 3 L11: 1.4172 L22: 1.4454 REMARK 3 L33: 1.5993 L12: 1.0780 REMARK 3 L13: 0.2908 L23: 1.1977 REMARK 3 S TENSOR REMARK 3 S11: 0.0936 S12: 0.1856 S13: 0.1281 REMARK 3 S21: -0.2491 S22: 0.1410 S23: 0.4326 REMARK 3 S31: 0.2451 S32: -0.2368 S33: -0.1726 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4663 36.5355 -9.0647 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.1403 REMARK 3 T33: 0.1865 T12: -0.0229 REMARK 3 T13: -0.0315 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.9039 L22: 1.3940 REMARK 3 L33: 2.0176 L12: 0.0989 REMARK 3 L13: -0.1078 L23: 0.1690 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: 0.0667 S13: 0.0577 REMARK 3 S21: -0.0755 S22: 0.0991 S23: 0.0967 REMARK 3 S31: 0.0919 S32: 0.0934 S33: -0.1624 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.3766 32.7030 4.7219 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.1271 REMARK 3 T33: 0.2194 T12: -0.0124 REMARK 3 T13: -0.0012 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.8402 L22: 1.9675 REMARK 3 L33: 1.4421 L12: 0.9641 REMARK 3 L13: 0.2657 L23: -0.1242 REMARK 3 S TENSOR REMARK 3 S11: 0.0898 S12: -0.1255 S13: 0.1604 REMARK 3 S21: 0.1505 S22: 0.0507 S23: 0.3050 REMARK 3 S31: 0.0770 S32: -0.0901 S33: -0.1205 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1122 32.6769 11.9786 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1369 REMARK 3 T33: 0.1817 T12: -0.0102 REMARK 3 T13: 0.0063 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 4.9682 L22: 2.3533 REMARK 3 L33: 2.3697 L12: 1.0462 REMARK 3 L13: -0.9522 L23: -0.3257 REMARK 3 S TENSOR REMARK 3 S11: 0.1573 S12: -0.3636 S13: 0.4571 REMARK 3 S21: 0.2285 S22: -0.0015 S23: 0.3636 REMARK 3 S31: -0.1001 S32: 0.1193 S33: -0.1426 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9304 15.8501 6.3910 REMARK 3 T TENSOR REMARK 3 T11: 0.3292 T22: 0.2067 REMARK 3 T33: 0.1906 T12: -0.0270 REMARK 3 T13: -0.0678 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 0.9368 L22: 0.9590 REMARK 3 L33: 3.4189 L12: -0.8096 REMARK 3 L13: -1.1664 L23: 0.3239 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: -0.0495 S13: -0.1654 REMARK 3 S21: -0.0511 S22: 0.0576 S23: 0.1107 REMARK 3 S31: 0.5672 S32: 0.0103 S33: -0.0787 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 296 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2999 28.2902 14.5574 REMARK 3 T TENSOR REMARK 3 T11: 0.2734 T22: 0.3150 REMARK 3 T33: 0.1460 T12: 0.0084 REMARK 3 T13: -0.0190 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 6.2810 L22: 3.3988 REMARK 3 L33: 0.9623 L12: 3.6377 REMARK 3 L13: 0.6088 L23: -0.2005 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.3258 S13: -0.0147 REMARK 3 S21: 0.1484 S22: -0.1151 S23: -0.1065 REMARK 3 S31: 0.0985 S32: 0.3254 S33: 0.1145 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EVD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30208 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 33.80 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 34.90 REMARK 200 R MERGE FOR SHELL (I) : 0.85800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1SML REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.75, 2.0 M AMMONIUM REMARK 280 SULPHATE, 1.5% PEG400. 1 UL PROTEIN (15 MG/ML) MIXED WITH 1 UL REMARK 280 RESERVOIR., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.72333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.44667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.72333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.44667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.72333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.44667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.72333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.44667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -52.65000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 91.19200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.500000 0.866025 0.000000 -52.65000 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 91.19200 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -32.69967 REMARK 350 BIOMT1 4 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -32.69967 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 740 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 768 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 21 REMARK 465 PRO A 22 REMARK 465 ALA A 318 REMARK 465 ARG A 319 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 538 O HOH A 561 1.78 REMARK 500 O HOH A 746 O HOH A 751 1.90 REMARK 500 O HOH A 633 O HOH A 751 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 24 71.61 -100.70 REMARK 500 ASP A 84 153.56 69.62 REMARK 500 ALA A 117 51.28 -95.67 REMARK 500 HIS A 121 -32.37 -132.46 REMARK 500 TYR A 237 73.14 -151.00 REMARK 500 CYS A 256 66.74 -158.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 116 NE2 REMARK 620 2 HIS A 118 ND1 99.0 REMARK 620 3 HIS A 196 NE2 97.0 108.7 REMARK 620 4 VC2 A 401 SAE 112.0 134.6 99.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 120 OD2 REMARK 620 2 HIS A 121 NE2 102.5 REMARK 620 3 HIS A 263 NE2 99.9 98.7 REMARK 620 4 VC2 A 401 SAE 108.7 124.0 119.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VC2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 DBREF 5EVD A 23 319 UNP P52700 BLA1_STEMA 22 290 SEQADV 5EVD GLY A 21 UNP P52700 EXPRESSION TAG SEQADV 5EVD PRO A 22 UNP P52700 EXPRESSION TAG SEQRES 1 A 271 GLY PRO ALA GLU VAL PRO LEU PRO GLN LEU ARG ALA TYR SEQRES 2 A 271 THR VAL ASP ALA SER TRP LEU GLN PRO MET ALA PRO LEU SEQRES 3 A 271 GLN ILE ALA ASP HIS THR TRP GLN ILE GLY THR GLU ASP SEQRES 4 A 271 LEU THR ALA LEU LEU VAL GLN THR PRO ASP GLY ALA VAL SEQRES 5 A 271 LEU LEU ASP GLY GLY MET PRO GLN MET ALA SER HIS LEU SEQRES 6 A 271 LEU ASP ASN MET LYS ALA ARG GLY VAL THR PRO ARG ASP SEQRES 7 A 271 LEU ARG LEU ILE LEU LEU SER HIS ALA HIS ALA ASP HIS SEQRES 8 A 271 ALA GLY PRO VAL ALA GLU LEU LYS ARG ARG THR GLY ALA SEQRES 9 A 271 LYS VAL ALA ALA ASN ALA GLU SER ALA VAL LEU LEU ALA SEQRES 10 A 271 ARG GLY GLY SER ASP ASP LEU HIS PHE GLY ASP GLY ILE SEQRES 11 A 271 THR TYR PRO PRO ALA ASN ALA ASP ARG ILE VAL MET ASP SEQRES 12 A 271 GLY GLU VAL ILE THR VAL GLY GLY ILE VAL PHE THR ALA SEQRES 13 A 271 HIS PHE MET ALA GLY HIS THR PRO GLY SER THR ALA TRP SEQRES 14 A 271 THR TRP THR ASP THR ARG ASN GLY LYS PRO VAL ARG ILE SEQRES 15 A 271 ALA TYR ALA ASP SER LEU SER ALA PRO GLY TYR GLN LEU SEQRES 16 A 271 GLN GLY ASN PRO ARG TYR PRO HIS LEU ILE GLU ASP TYR SEQRES 17 A 271 ARG ARG SER PHE ALA THR VAL ARG ALA LEU PRO CYS ASP SEQRES 18 A 271 VAL LEU LEU THR PRO HIS PRO GLY ALA SER ASN TRP ASP SEQRES 19 A 271 TYR ALA ALA GLY ALA ARG ALA GLY ALA LYS ALA LEU THR SEQRES 20 A 271 CYS LYS ALA TYR ALA ASP ALA ALA GLU GLN LYS PHE ASP SEQRES 21 A 271 GLY GLN LEU ALA LYS GLU THR ALA GLY ALA ARG HET VC2 A 401 15 HET ZN A 402 1 HET ZN A 403 1 HET SO4 A 404 5 HET SO4 A 405 5 HETNAM VC2 (3S,5S,7AR)-2,2-DIMETHYL-5-(SULFANYLMETHYL) HETNAM 2 VC2 TETRAHYDRO[1,3]THIAZOLO[4,3-B][1,3]THIAZOLE-3- HETNAM 3 VC2 CARBOXYLIC ACID HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 2 VC2 C9 H15 N O2 S3 FORMUL 3 ZN 2(ZN 2+) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *271(H2 O) HELIX 1 AA1 ASP A 36 GLN A 41 5 6 HELIX 2 AA2 MET A 87 GLN A 90 5 3 HELIX 3 AA3 MET A 91 ARG A 102 1 12 HELIX 4 AA4 THR A 105 ARG A 107 5 3 HELIX 5 AA5 HIS A 118 GLY A 123 1 6 HELIX 6 AA6 PRO A 124 THR A 132 1 9 HELIX 7 AA7 ASN A 139 ARG A 148 1 10 HELIX 8 AA8 HIS A 239 LEU A 254 1 16 HELIX 9 AA9 HIS A 263 ASN A 268 5 6 HELIX 10 AB1 ASP A 270 ALA A 289 5 8 HELIX 11 AB2 THR A 295 GLY A 317 1 23 SHEET 1 AA1 7 LEU A 46 ALA A 49 0 SHEET 2 AA1 7 THR A 52 GLN A 54 -1 O THR A 52 N ILE A 48 SHEET 3 AA1 7 LEU A 72 THR A 76 -1 O LEU A 73 N TRP A 53 SHEET 4 AA1 7 GLY A 79 LEU A 83 -1 O VAL A 81 N VAL A 74 SHEET 5 AA1 7 LEU A 109 LEU A 113 1 O LEU A 113 N LEU A 82 SHEET 6 AA1 7 LYS A 135 ALA A 138 1 O LYS A 135 N ILE A 112 SHEET 7 AA1 7 ARG A 172 ILE A 173 1 O ARG A 172 N ALA A 138 SHEET 1 AA2 5 VAL A 179 VAL A 182 0 SHEET 2 AA2 5 ILE A 185 PHE A 191 -1 O PHE A 187 N ILE A 180 SHEET 3 AA2 5 THR A 201 ARG A 209 -1 O ALA A 202 N HIS A 190 SHEET 4 AA2 5 LYS A 212 TYR A 218 -1 O VAL A 214 N ASP A 207 SHEET 5 AA2 5 VAL A 258 LEU A 260 1 O VAL A 258 N ALA A 217 SSBOND 1 CYS A 256 CYS A 296 1555 1555 2.07 LINK NE2 HIS A 116 ZN ZN A 402 1555 1555 2.12 LINK ND1 HIS A 118 ZN ZN A 402 1555 1555 2.07 LINK OD2 ASP A 120 ZN ZN A 403 1555 1555 2.01 LINK NE2 HIS A 121 ZN ZN A 403 1555 1555 2.04 LINK NE2 HIS A 196 ZN ZN A 402 1555 1555 2.07 LINK NE2 HIS A 263 ZN ZN A 403 1555 1555 2.11 LINK SAE VC2 A 401 ZN ZN A 402 1555 1555 2.34 LINK SAE VC2 A 401 ZN ZN A 403 1555 1555 1.96 SITE 1 AC1 14 HIS A 116 HIS A 118 ASP A 120 HIS A 121 SITE 2 AC1 14 PHE A 156 ILE A 162 HIS A 196 PRO A 227 SITE 3 AC1 14 HIS A 263 ZN A 402 ZN A 403 HOH A 511 SITE 4 AC1 14 HOH A 538 HOH A 633 SITE 1 AC2 4 HIS A 116 HIS A 118 HIS A 196 VC2 A 401 SITE 1 AC3 5 ASP A 120 HIS A 121 HIS A 263 VC2 A 401 SITE 2 AC3 5 HOH A 538 SITE 1 AC4 5 ARG A 172 VAL A 179 ILE A 180 THR A 181 SITE 2 AC4 5 HOH A 537 SITE 1 AC5 8 ARG A 252 ALA A 275 ARG A 276 ALA A 289 SITE 2 AC5 8 GLY A 290 ALA A 291 LYS A 297 HOH A 517 CRYST1 105.130 105.130 98.170 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009512 0.005492 0.000000 0.00000 SCALE2 0.000000 0.010984 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010186 0.00000