HEADER UNKNOWN FUNCTION 19-NOV-15 5EVH TITLE CRYSTAL STRUCTURE OF KNOWN FUNCTION PROTEIN FROM KRIBBELLA FLAVIDA DSM TITLE 2 17836 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KRIBBELLA FLAVIDA (STRAIN DSM 17836 / JCM 10339 SOURCE 3 / NBRC 14399); SOURCE 4 ORGANISM_TAXID: 479435; SOURCE 5 STRAIN: DSM 17836 / JCM 10339 / NBRC 14399; SOURCE 6 GENE: KFLA_2811; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, UNKOWN FUNCTION, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,N.DUKE,M.ENDRES,G.CHHOR,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 1 02-DEC-15 5EVH 0 JRNL AUTH C.CHANG,N.DUKE,M.ENDRES,G.CHHOR,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF KNOWN FUNCTION PROTEIN FROM KRIBBELLA JRNL TITL 2 FLAVIDA DSM 17836 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 12892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.160 REMARK 3 FREE R VALUE TEST SET COUNT : 545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4668 - 3.5405 0.99 3312 156 0.1463 0.1534 REMARK 3 2 3.5405 - 2.8107 1.00 3345 158 0.1644 0.2110 REMARK 3 3 2.8107 - 2.4556 1.00 3341 145 0.1765 0.1926 REMARK 3 4 2.4556 - 2.2311 1.00 3331 139 0.1779 0.2390 REMARK 3 5 2.2311 - 2.0712 1.00 3322 155 0.1822 0.2272 REMARK 3 6 2.0712 - 1.9491 0.99 3344 125 0.2134 0.2710 REMARK 3 7 1.9491 - 1.8515 0.68 2282 89 0.2512 0.2963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 991 REMARK 3 ANGLE : 1.582 1356 REMARK 3 CHIRALITY : 0.107 151 REMARK 3 PLANARITY : 0.010 180 REMARK 3 DIHEDRAL : 14.220 579 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6111 -4.5288 22.4774 REMARK 3 T TENSOR REMARK 3 T11: 0.1359 T22: 0.1412 REMARK 3 T33: 0.1249 T12: 0.0088 REMARK 3 T13: -0.0199 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 3.5264 L22: 4.2144 REMARK 3 L33: 3.2645 L12: -0.9956 REMARK 3 L13: -0.0850 L23: 0.5262 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: 0.2242 S13: 0.3290 REMARK 3 S21: -0.0302 S22: 0.1014 S23: -0.0157 REMARK 3 S31: -0.0064 S32: -0.1754 S33: -0.0176 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8399 -4.4501 23.7841 REMARK 3 T TENSOR REMARK 3 T11: 0.1302 T22: 0.2553 REMARK 3 T33: 0.2076 T12: -0.0311 REMARK 3 T13: -0.0584 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 1.9347 L22: 1.5236 REMARK 3 L33: 0.7612 L12: -0.3428 REMARK 3 L13: 0.8837 L23: -0.6344 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: 0.3383 S13: 0.0305 REMARK 3 S21: -0.0942 S22: -0.2249 S23: -0.4392 REMARK 3 S31: -0.0585 S32: 0.6309 S33: 0.0224 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9229 -11.9419 20.3643 REMARK 3 T TENSOR REMARK 3 T11: 0.1298 T22: 0.3053 REMARK 3 T33: 0.2514 T12: -0.0029 REMARK 3 T13: -0.0029 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.9689 L22: 0.9512 REMARK 3 L33: 0.6535 L12: 0.3242 REMARK 3 L13: 0.4723 L23: 0.6345 REMARK 3 S TENSOR REMARK 3 S11: 0.0216 S12: 0.3107 S13: -0.0029 REMARK 3 S21: -0.0584 S22: 0.0177 S23: -0.3973 REMARK 3 S31: -0.0149 S32: 0.3643 S33: -0.0127 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2733 -13.7263 28.1847 REMARK 3 T TENSOR REMARK 3 T11: 0.1488 T22: 0.1345 REMARK 3 T33: 0.0936 T12: 0.0371 REMARK 3 T13: -0.0221 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 1.6246 L22: 0.9182 REMARK 3 L33: 1.0489 L12: 0.1396 REMARK 3 L13: -0.0697 L23: 0.2213 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.1991 S13: -0.0087 REMARK 3 S21: 0.0394 S22: -0.0251 S23: 0.1385 REMARK 3 S31: 0.0010 S32: 0.0545 S33: 0.0342 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1287 -5.6072 30.8705 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1507 REMARK 3 T33: 0.1157 T12: -0.0115 REMARK 3 T13: -0.0258 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 2.2750 L22: 4.2515 REMARK 3 L33: 1.9721 L12: -0.4609 REMARK 3 L13: 0.1903 L23: -1.6267 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: 0.1585 S13: 0.3327 REMARK 3 S21: 0.1863 S22: -0.1122 S23: -0.1646 REMARK 3 S31: -0.1800 S32: 0.3405 S33: 0.1141 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6460 -29.5425 28.1071 REMARK 3 T TENSOR REMARK 3 T11: 0.3775 T22: 0.5274 REMARK 3 T33: 0.3621 T12: 0.3433 REMARK 3 T13: -0.0636 T23: -0.1877 REMARK 3 L TENSOR REMARK 3 L11: 2.4021 L22: 5.5688 REMARK 3 L33: 0.1010 L12: -3.3040 REMARK 3 L13: -0.4274 L23: 0.4170 REMARK 3 S TENSOR REMARK 3 S11: 0.2630 S12: 0.5615 S13: -0.2919 REMARK 3 S21: -0.2997 S22: -0.0946 S23: -0.5762 REMARK 3 S31: 0.4744 S32: 0.6327 S33: 0.2615 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13604 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 17.90 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.60 REMARK 200 R MERGE FOR SHELL (I) : 1.44200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM ACTATE, SODIUM ACETATE PH REMARK 280 4.6, PEG4000, GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.23950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 22.95400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 22.95400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.11975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 22.95400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 22.95400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 105.35925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 22.95400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.95400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.11975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 22.95400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.95400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 105.35925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.23950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.23950 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 2 REMARK 465 GLN A 3 REMARK 465 HIS A 4 REMARK 465 LYS A 126 REMARK 465 LEU A 127 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 100 CG OD1 OD2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 55 NH2 ARG A 59 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 407 O HOH A 407 8555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 54 CG - SE - CE ANGL. DEV. = -16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 75.13 -100.89 REMARK 500 ASP A 72 -150.00 -129.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 421 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 422 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 423 DISTANCE = 6.11 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC103591 RELATED DB: TARGETTRACK DBREF 5EVH A 1 127 UNP D2Q084 D2Q084_KRIFD 1 127 SEQRES 1 A 127 MSE HIS GLN HIS SER THR ALA ALA LEU ASP THR ALA LEU SEQRES 2 A 127 ALA TYR HIS ARG ALA TRP THR GLY ARG ASP PHE ASP THR SEQRES 3 A 127 ALA MSE ARG HIS VAL ALA GLY GLY ILE VAL CYS HIS ALA SEQRES 4 A 127 PRO ALA GLY ARG ILE ASP GLY ALA ASP ALA PHE ARG ALA SEQRES 5 A 127 PHE MSE GLU PRO PHE SER ARG ILE LEU VAL GLY SER ALA SEQRES 6 A 127 VAL LEU SER ALA PHE GLY ASP ALA THR THR ALA LEU LEU SEQRES 7 A 127 MSE TYR ASP THR GLU THR VAL PRO VAL PRO HIS ALA PRO SEQRES 8 A 127 ALA ALA GLU HIS LEU THR VAL HIS ASP GLY ARG ILE THR SEQRES 9 A 127 GLN LEU ARG ILE ILE PHE ASP ARG THR PRO PHE GLU GLN SEQRES 10 A 127 ALA ARG THR ALA ARG ASP GLU GLY LYS LEU MODRES 5EVH MSE A 28 MET MODIFIED RESIDUE MODRES 5EVH MSE A 54 MET MODIFIED RESIDUE MODRES 5EVH MSE A 79 MET MODIFIED RESIDUE HET MSE A 28 8 HET MSE A 54 16 HET MSE A 79 8 HET GOL A 201 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *123(H2 O) HELIX 1 AA1 THR A 6 GLY A 21 1 16 HELIX 2 AA2 ASP A 23 ARG A 29 1 7 HELIX 3 AA3 GLY A 46 ARG A 59 1 14 HELIX 4 AA4 ARG A 112 GLY A 125 1 14 SHEET 1 AA1 6 GLY A 42 ASP A 45 0 SHEET 2 AA1 6 VAL A 31 ALA A 39 -1 N CYS A 37 O ILE A 44 SHEET 3 AA1 6 ARG A 102 ILE A 109 1 O LEU A 106 N HIS A 38 SHEET 4 AA1 6 ALA A 92 HIS A 99 -1 N HIS A 99 O ARG A 102 SHEET 5 AA1 6 THR A 75 THR A 84 -1 N ALA A 76 O LEU A 96 SHEET 6 AA1 6 LEU A 61 GLY A 71 -1 N ALA A 65 O ASP A 81 LINK C ALA A 27 N MSE A 28 1555 1555 1.34 LINK C MSE A 28 N ARG A 29 1555 1555 1.34 LINK C PHE A 53 N AMSE A 54 1555 1555 1.32 LINK C PHE A 53 N BMSE A 54 1555 1555 1.34 LINK C AMSE A 54 N GLU A 55 1555 1555 1.33 LINK C BMSE A 54 N GLU A 55 1555 1555 1.33 LINK C LEU A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N TYR A 80 1555 1555 1.35 SITE 1 AC1 4 ILE A 60 PHE A 110 HOH A 315 HOH A 318 CRYST1 45.908 45.908 140.479 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007119 0.00000