data_5EW1 # _entry.id 5EW1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5EW1 pdb_00005ew1 10.2210/pdb5ew1/pdb WWPDB D_1000215448 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-30 2 'Structure model' 1 1 2016-12-14 3 'Structure model' 1 2 2016-12-21 4 'Structure model' 1 3 2017-01-18 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2024-01-10 7 'Structure model' 1 6 2024-10-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Non-polymer description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' 10 6 'Structure model' 'Structure summary' 11 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp 2 5 'Structure model' entity 3 5 'Structure model' pdbx_chem_comp_identifier 4 5 'Structure model' pdbx_entity_nonpoly 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site 7 5 'Structure model' struct_site_gen 8 6 'Structure model' chem_comp 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 6 'Structure model' database_2 12 6 'Structure model' pdbx_initial_refinement_model 13 7 'Structure model' pdbx_entry_details 14 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_nonpoly.name' 5 5 'Structure model' '_struct_conn.conn_type_id' 6 5 'Structure model' '_struct_conn.id' 7 5 'Structure model' '_struct_conn.pdbx_dist_value' 8 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 10 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 6 'Structure model' '_chem_comp.pdbx_synonyms' 24 6 'Structure model' '_database_2.pdbx_DOI' 25 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EW1 _pdbx_database_status.recvd_initial_deposition_date 2015-11-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pica, A.' 1 'Russo Krauss, I.' 2 'Parente, V.' 3 'Sica, F.' 4 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Nucleic Acids Res.' NARHAD 0389 1362-4962 ? ? 45 ? 461 469 'Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers.' 2017 ? 10.1093/nar/gkw1113 27899589 ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 ? 1399-0047 ? ? 69 ? 2403 2411 'Duplex-quadruplex motifs in a peculiar structural organization cooperatively contribute to thrombin binding of a DNA aptamer.' 2013 ? 10.1107/S0907444913022269 24311581 ? ? ? ? ? ? ? ? UK ? ? 2 'FEBS J.' ? ? 1742-4658 ? ? 280 ? 6581 6588 'Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer.' 2013 ? 10.1111/febs.12561 24128303 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pica, A.' 1 ? primary 'Russo Krauss, I.' 2 ? primary 'Parente, V.' 3 ? primary 'Tateishi-Karimata, H.' 4 ? primary 'Nagatoishi, S.' 5 ? primary 'Tsumoto, K.' 6 ? primary 'Sugimoto, N.' 7 ? primary 'Sica, F.' 8 ? 1 'Russo Krauss, I.' 9 ? 1 'Pica, A.' 10 ? 1 'Merlino, A.' 11 ? 1 'Mazzarella, L.' 12 ? 1 'Sica, F.' 13 ? 2 'Pica, A.' 14 ? 2 'Russo Krauss, I.' 15 ? 2 'Merlino, A.' 16 ? 2 'Nagatoishi, S.' 17 ? 2 'Sugimoto, N.' 18 ? 2 'Sica, F.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'thrombin light chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin heavy chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'HD22 (27mer)' 8485.429 1 ? ? ? ? 4 polymer syn HD1-deltaT3 4618.955 1 ? ? ? 'HD1 variant in which nucleobase of T3 has been deleted' 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 8 water nat water 18.015 74 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 polydeoxyribonucleotide no no ;(DG)(DT)(DC)(DC)(DG)(DT)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DC)(DA)(DG)(DG)(DT)(DT)(DG) (DG)(DG)(DG)(DT)(DG)(DA)(DC) ; GTCCGTGGTAGGGCAGGTTGGGGTGAC D ? 4 polydeoxyribonucleotide no yes '(DG)(DG)(3DR)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DG)' GGNTGGTGTGGTTGG E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 7 'SODIUM ION' NA 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DC n 3 5 DG n 3 6 DT n 3 7 DG n 3 8 DG n 3 9 DT n 3 10 DA n 3 11 DG n 3 12 DG n 3 13 DG n 3 14 DC n 3 15 DA n 3 16 DG n 3 17 DG n 3 18 DT n 3 19 DT n 3 20 DG n 3 21 DG n 3 22 DG n 3 23 DG n 3 24 DT n 3 25 DG n 3 26 DA n 3 27 DC n 4 1 DG n 4 2 DG n 4 3 3DR n 4 4 DT n 4 5 DG n 4 6 DG n 4 7 DT n 4 8 DG n 4 9 DT n 4 10 DG n 4 11 DG n 4 12 DT n 4 13 DT n 4 14 DG n 4 15 DG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 36 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 259 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample 1 27 'Homo sapiens' human 9606 ? 4 1 sample 1 15 'Homo sapiens' human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 -5 ? ? ? L . n A 1 2 PHE 2 -4 ? ? ? L . n A 1 3 GLY 3 -3 ? ? ? L . n A 1 4 SER 4 -2 ? ? ? L . n A 1 5 GLY 5 -1 ? ? ? L . n A 1 6 GLU 6 0 ? ? ? L . n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 15 ? ? ? L . n A 1 34 ASP 34 16 ? ? ? L . n A 1 35 GLY 35 17 ? ? ? L . n A 1 36 ARG 36 18 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 147 ? ? ? H A n B 2 149 THR 149 147 ? ? ? H B n B 2 150 ALA 150 147 ? ? ? H C n B 2 151 ASN 151 147 ? ? ? H D n B 2 152 VAL 152 147 ? ? ? H E n B 2 153 GLY 153 147 ? ? ? H F n B 2 154 LYS 154 147 ? ? ? H G n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H A n B 2 233 ARG 233 221 221 ARG ARG H . n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 DG 1 1 ? ? ? D . n C 3 2 DT 2 2 2 DT DT D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DG 5 5 5 DG DG D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DG 7 7 7 DG DG D . n C 3 8 DG 8 8 8 DG DG D . n C 3 9 DT 9 9 9 DT DT D . n C 3 10 DA 10 10 10 DA DA D . n C 3 11 DG 11 11 11 DG DG D . n C 3 12 DG 12 12 12 DG DG D . n C 3 13 DG 13 13 13 DG DG D . n C 3 14 DC 14 14 14 DC DC D . n C 3 15 DA 15 15 15 DA DA D . n C 3 16 DG 16 16 16 DG DG D . n C 3 17 DG 17 17 17 DG DG D . n C 3 18 DT 18 18 18 DT DT D . n C 3 19 DT 19 19 19 DT DT D . n C 3 20 DG 20 20 20 DG DG D . n C 3 21 DG 21 21 21 DG DG D . n C 3 22 DG 22 22 22 DG DG D . n C 3 23 DG 23 23 23 DG DG D . n C 3 24 DT 24 24 24 DT DT D . n C 3 25 DG 25 25 25 DG DG D . n C 3 26 DA 26 26 26 DA DA D . n C 3 27 DC 27 27 27 DC DC D . n D 4 1 DG 1 1 1 DG DG E . n D 4 2 DG 2 2 2 DG DG E . n D 4 3 3DR 3 3 3 3DR 3DR E . n D 4 4 DT 4 4 4 DT DT E . n D 4 5 DG 5 5 5 DG DG E . n D 4 6 DG 6 6 6 DG DG E . n D 4 7 DT 7 7 7 DT DT E . n D 4 8 DG 8 8 8 DG DG E . n D 4 9 DT 9 9 9 DT DT E . n D 4 10 DG 10 10 10 DG DG E . n D 4 11 DG 11 11 11 DG DG E . n D 4 12 DT 12 12 12 DT DT E . n D 4 13 DT 13 13 13 DT DT E . n D 4 14 DG 14 14 14 DG DG E . n D 4 15 DG 15 15 15 DG DG E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 301 301 NAG NAG H . F 6 0G6 1 302 302 0G6 0G6 H . G 7 NA 1 101 2 NA NA D . H 7 NA 1 101 1 NA NA E . I 8 HOH 1 101 70 HOH HOH L . J 8 HOH 1 401 17 HOH HOH H . J 8 HOH 2 402 67 HOH HOH H . J 8 HOH 3 403 47 HOH HOH H . J 8 HOH 4 404 74 HOH HOH H . J 8 HOH 5 405 20 HOH HOH H . J 8 HOH 6 406 15 HOH HOH H . J 8 HOH 7 407 41 HOH HOH H . J 8 HOH 8 408 14 HOH HOH H . J 8 HOH 9 409 68 HOH HOH H . J 8 HOH 10 410 37 HOH HOH H . J 8 HOH 11 411 46 HOH HOH H . J 8 HOH 12 412 56 HOH HOH H . J 8 HOH 13 413 19 HOH HOH H . J 8 HOH 14 414 4 HOH HOH H . J 8 HOH 15 415 9 HOH HOH H . J 8 HOH 16 416 3 HOH HOH H . J 8 HOH 17 417 54 HOH HOH H . J 8 HOH 18 418 45 HOH HOH H . J 8 HOH 19 419 43 HOH HOH H . J 8 HOH 20 420 53 HOH HOH H . J 8 HOH 21 421 33 HOH HOH H . J 8 HOH 22 422 40 HOH HOH H . J 8 HOH 23 423 71 HOH HOH H . J 8 HOH 24 424 66 HOH HOH H . J 8 HOH 25 425 2 HOH HOH H . J 8 HOH 26 426 38 HOH HOH H . J 8 HOH 27 427 10 HOH HOH H . J 8 HOH 28 428 36 HOH HOH H . J 8 HOH 29 429 57 HOH HOH H . J 8 HOH 30 430 26 HOH HOH H . J 8 HOH 31 431 13 HOH HOH H . J 8 HOH 32 432 23 HOH HOH H . J 8 HOH 33 433 39 HOH HOH H . J 8 HOH 34 434 55 HOH HOH H . J 8 HOH 35 435 5 HOH HOH H . J 8 HOH 36 436 1 HOH HOH H . J 8 HOH 37 437 16 HOH HOH H . J 8 HOH 38 438 48 HOH HOH H . J 8 HOH 39 439 51 HOH HOH H . J 8 HOH 40 440 42 HOH HOH H . J 8 HOH 41 441 44 HOH HOH H . J 8 HOH 42 442 49 HOH HOH H . J 8 HOH 43 443 8 HOH HOH H . J 8 HOH 44 444 11 HOH HOH H . J 8 HOH 45 445 35 HOH HOH H . J 8 HOH 46 446 28 HOH HOH H . J 8 HOH 47 447 34 HOH HOH H . J 8 HOH 48 448 30 HOH HOH H . J 8 HOH 49 449 32 HOH HOH H . J 8 HOH 50 450 69 HOH HOH H . J 8 HOH 51 451 73 HOH HOH H . J 8 HOH 52 452 6 HOH HOH H . J 8 HOH 53 453 31 HOH HOH H . J 8 HOH 54 454 62 HOH HOH H . J 8 HOH 55 455 18 HOH HOH H . J 8 HOH 56 456 12 HOH HOH H . K 8 HOH 1 201 52 HOH HOH D . K 8 HOH 2 202 7 HOH HOH D . K 8 HOH 3 203 61 HOH HOH D . K 8 HOH 4 204 65 HOH HOH D . K 8 HOH 5 205 58 HOH HOH D . K 8 HOH 6 206 27 HOH HOH D . K 8 HOH 7 207 59 HOH HOH D . K 8 HOH 8 208 64 HOH HOH D . K 8 HOH 9 209 60 HOH HOH D . K 8 HOH 10 210 21 HOH HOH D . L 8 HOH 1 201 25 HOH HOH E . L 8 HOH 2 202 22 HOH HOH E . L 8 HOH 3 203 29 HOH HOH E . L 8 HOH 4 204 72 HOH HOH E . L 8 HOH 5 205 24 HOH HOH E . L 8 HOH 6 206 50 HOH HOH E . L 8 HOH 7 207 63 HOH HOH E . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id H _pdbx_unobs_or_zero_occ_atoms.auth_comp_id NAG _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 301 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id E _pdbx_unobs_or_zero_occ_atoms.label_comp_id NAG _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O1 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5EW1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 145.548 _cell.length_a_esd ? _cell.length_b 145.548 _cell.length_b_esd ? _cell.length_c 145.548 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EW1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EW1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;28% MPEG 2000, 0.1 M Bis/Tris pH 6.5 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5EW1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.950 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10960 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 21.6 _reflns.pdbx_Rmerge_I_obs 0.184 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 21.217 _reflns.pdbx_netI_over_sigmaI 4.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.999 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.189 _reflns.pdbx_Rpim_I_all 0.040 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 236610 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.950 3.060 ? ? ? ? ? 1078 ? 100.000 ? ? ? ? 0.749 ? ? ? ? ? ? ? ? 20.2 ? 0.917 ? ? 0.769 0.170 0 1 1 0.919 ? 3.060 3.180 ? ? ? ? ? 1083 ? 100.000 ? ? ? ? 0.551 ? ? ? ? ? ? ? ? 22.000 ? 0.961 ? ? 0.564 0.120 0 2 1 0.957 ? 3.180 3.320 ? ? ? ? ? 1082 ? 100.000 ? ? ? ? 0.399 ? ? ? ? ? ? ? ? 21.900 ? 0.942 ? ? 0.409 0.087 0 3 1 0.979 ? 3.320 3.500 ? ? ? ? ? 1091 ? 100.000 ? ? ? ? 0.307 ? ? ? ? ? ? ? ? 22.100 ? 0.965 ? ? 0.314 0.067 0 4 1 0.986 ? 3.500 3.720 ? ? ? ? ? 1083 ? 100.000 ? ? ? ? 0.213 ? ? ? ? ? ? ? ? 22.000 ? 0.992 ? ? 0.218 0.046 0 5 1 0.994 ? 3.720 4.000 ? ? ? ? ? 1090 ? 100.000 ? ? ? ? 0.170 ? ? ? ? ? ? ? ? 22.000 ? 0.997 ? ? 0.174 0.037 0 6 1 0.995 ? 4.000 4.410 ? ? ? ? ? 1091 ? 100.000 ? ? ? ? 0.127 ? ? ? ? ? ? ? ? 22.000 ? 1.100 ? ? 0.130 0.028 0 7 1 0.998 ? 4.410 5.040 ? ? ? ? ? 1104 ? 100.000 ? ? ? ? 0.111 ? ? ? ? ? ? ? ? 21.800 ? 1.035 ? ? 0.113 0.024 0 8 1 0.998 ? 5.040 6.350 ? ? ? ? ? 1106 ? 100.000 ? ? ? ? 0.117 ? ? ? ? ? ? ? ? 21.600 ? 1.020 ? ? 0.120 0.026 0 9 1 0.998 ? 6.350 50.000 ? ? ? ? ? 1152 ? 99.900 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 20.400 ? 1.054 ? ? 0.074 0.016 0 10 1 0.999 ? # _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.B_iso_max 136.090 _refine.B_iso_mean 50.9540 _refine.B_iso_min 20.640 _refine.correlation_coeff_Fo_to_Fc 0.9560 _refine.correlation_coeff_Fo_to_Fc_free 0.9230 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5EW1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.9500 _refine.ls_d_res_low 50 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10317 _refine.ls_number_reflns_R_free 586 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.4300 _refine.ls_percent_reflns_R_free 5.4000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1584 _refine.ls_R_factor_R_free 0.2080 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1555 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.1653 _refine.ls_wR_factor_R_work 0.1261 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4I7Y _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.3500 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 26.7790 _refine.overall_SU_ML 0.2410 _refine.overall_SU_R_Cruickshank_DPI 0.2638 _refine.overall_SU_R_free 0.3497 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.8568 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.9500 _refine_hist.d_res_low 50 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 3214 _refine_hist.pdbx_number_residues_total 318 _refine_hist.pdbx_B_iso_mean_ligand 38.47 _refine_hist.pdbx_B_iso_mean_solvent 39.64 _refine_hist.pdbx_number_atoms_protein 2243 _refine_hist.pdbx_number_atoms_nucleic_acid 851 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.017 3303 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 2690 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.006 1.723 4649 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.293 3.000 6236 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.811 5.000 274 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.274 23.211 109 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.685 15.000 413 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.959 15.000 20 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.114 0.200 452 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.021 3087 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 739 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.959 3.587 1108 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.958 3.587 1109 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.116 5.379 1378 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.9510 _refine_ls_shell.d_res_low 3.0280 _refine_ls_shell.number_reflns_all 789 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_R_work 741 _refine_ls_shell.percent_reflns_obs 98.3800 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3200 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2640 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5EW1 _struct.title 'Human thrombin sandwiched between two DNA aptamers: HD22 and HD1-deltaT3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EW1 _struct_keywords.text ;PROTEIN-DNA COMPLEX, BLOOD COAGULATION, DNA APTAMER, DNA-INHIBITOR, G-QUADRUPLEX, DUPLEX-QUADRUPLEX JUNCTION, SERINE PROTEASE, HYDROLASE, ABASIC FURAN, HYDROLASE-DNA COMPLEX ; _struct_keywords.pdbx_keywords protein/dna # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP THRB_HUMAN P00734 ? 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 2 UNP THRB_HUMAN P00734 ? 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 3 PDB 5EW1 5EW1 ? 3 ? 1 4 PDB 5EW1 5EW1 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5EW1 L 1 ? 36 ? P00734 328 ? 363 ? -5 18 2 2 5EW1 H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 5EW1 D 1 ? 27 ? 5EW1 1 ? 27 ? 1 27 4 4 5EW1 E 1 ? 15 ? 5EW1 1 ? 15 ? 1 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5710 ? 1 MORE -20 ? 1 'SSA (A^2)' 17280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 AA2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 AA3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 AA4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 AA5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 AA6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 AA7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 AA8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 AA9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.007 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.005 ? ? covale1 covale one ? B HIS 43 NE2 ? ? ? 1_555 F 0G6 . C3 ? ? H HIS 57 H 0G6 302 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale2 covale none ? B SER 205 OG ? ? ? 1_555 F 0G6 . C2 ? ? H SER 195 H 0G6 302 1_555 ? ? ? ? ? ? ? 1.411 ? ? covale3 covale both ? D DG 2 "O3'" ? ? ? 1_555 D 3DR 3 P ? ? E DG 2 E 3DR 3 1_555 ? ? ? ? ? ? ? 1.571 ? ? covale4 covale both ? D 3DR 3 "O3'" ? ? ? 1_555 D DT 4 P ? ? E 3DR 3 E DT 4 1_555 ? ? ? ? ? ? ? 1.563 ? ? metalc1 metalc ? ? C DG 7 O6 ? ? ? 1_555 G NA . NA ? ? D DG 7 D NA 101 1_555 ? ? ? ? ? ? ? 2.996 ? ? metalc2 metalc ? ? C DG 8 O6 ? ? ? 1_555 G NA . NA ? ? D DG 8 D NA 101 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc3 metalc ? ? C DG 11 O6 ? ? ? 1_555 G NA . NA ? ? D DG 11 D NA 101 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc4 metalc ? ? C DG 16 O6 ? ? ? 1_555 G NA . NA ? ? D DG 16 D NA 101 1_555 ? ? ? ? ? ? ? 3.177 ? ? metalc5 metalc ? ? C DG 17 O6 ? ? ? 1_555 G NA . NA ? ? D DG 17 D NA 101 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc6 metalc ? ? C DG 20 O6 ? ? ? 1_555 G NA . NA ? ? D DG 20 D NA 101 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc7 metalc ? ? D DG 1 O6 ? ? ? 1_555 H NA . NA ? ? E DG 1 E NA 101 1_555 ? ? ? ? ? ? ? 2.585 ? ? metalc8 metalc ? ? D DG 2 O6 ? ? ? 1_555 H NA . NA ? ? E DG 2 E NA 101 1_555 ? ? ? ? ? ? ? 2.622 ? ? metalc9 metalc ? ? D DG 5 O6 ? ? ? 1_555 H NA . NA ? ? E DG 5 E NA 101 1_555 ? ? ? ? ? ? ? 2.655 ? ? metalc10 metalc ? ? D DG 6 O6 ? ? ? 1_555 H NA . NA ? ? E DG 6 E NA 101 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc11 metalc ? ? D DG 10 O6 ? ? ? 1_555 H NA . NA ? ? E DG 10 E NA 101 1_555 ? ? ? ? ? ? ? 2.590 ? ? metalc12 metalc ? ? D DG 11 O6 ? ? ? 1_555 H NA . NA ? ? E DG 11 E NA 101 1_555 ? ? ? ? ? ? ? 2.780 ? ? metalc13 metalc ? ? D DG 14 O6 ? ? ? 1_555 H NA . NA ? ? E DG 14 E NA 101 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc14 metalc ? ? D DG 15 O6 ? ? ? 1_555 H NA . NA ? ? E DG 15 E NA 101 1_555 ? ? ? ? ? ? ? 2.565 ? ? hydrog1 hydrog ? ? C DT 2 N3 ? ? ? 1_555 C DA 26 N1 ? ? D DT 2 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 2 O4 ? ? ? 1_555 C DA 26 N6 ? ? D DT 2 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 3 N3 ? ? ? 1_555 C DG 25 N1 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 3 N4 ? ? ? 1_555 C DG 25 O6 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 3 O2 ? ? ? 1_555 C DG 25 N2 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 4 N3 ? ? ? 1_555 C DG 23 N1 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 4 N4 ? ? ? 1_555 C DG 23 O6 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 4 O2 ? ? ? 1_555 C DG 23 N2 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N2 ? ? ? 1_555 C DG 7 O6 ? ? D DG 5 D DG 7 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog10 hydrog ? ? C DG 5 N1 ? ? ? 1_555 C DG 16 N7 ? ? D DG 5 D DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog11 hydrog ? ? C DG 5 N2 ? ? ? 1_555 C DG 16 O6 ? ? D DG 5 D DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog12 hydrog ? ? C DT 6 N3 ? ? ? 1_555 C DA 15 N7 ? ? D DT 6 D DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog13 hydrog ? ? C DT 6 O2 ? ? ? 1_555 C DA 15 N6 ? ? D DT 6 D DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog14 hydrog ? ? C DG 7 N7 ? ? ? 1_555 C DG 12 N1 ? ? D DG 7 D DG 12 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog15 hydrog ? ? C DG 7 O6 ? ? ? 1_555 C DG 12 N2 ? ? D DG 7 D DG 12 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog16 hydrog ? ? C DG 8 N7 ? ? ? 1_555 C DG 11 N2 ? ? D DG 8 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? C DG 8 O6 ? ? ? 1_555 C DG 11 N1 ? ? D DG 8 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? C DG 8 N1 ? ? ? 1_555 C DG 20 O6 ? ? D DG 8 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? C DG 8 N2 ? ? ? 1_555 C DG 20 N7 ? ? D DG 8 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? C DA 10 N1 ? ? ? 1_555 C DT 19 N3 ? ? D DA 10 D DT 19 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog21 hydrog ? ? C DA 10 N6 ? ? ? 1_555 C DT 19 O2 ? ? D DA 10 D DT 19 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog22 hydrog ? ? C DG 11 N7 ? ? ? 1_555 C DG 17 N2 ? ? D DG 11 D DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? C DG 11 O6 ? ? ? 1_555 C DG 17 N1 ? ? D DG 11 D DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? C DG 12 N2 ? ? ? 1_555 C DG 16 O6 ? ? D DG 12 D DG 16 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog25 hydrog ? ? C DG 17 N7 ? ? ? 1_555 C DG 20 N2 ? ? D DG 17 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? C DG 17 O6 ? ? ? 1_555 C DG 20 N1 ? ? D DG 17 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? D DG 1 N1 ? ? ? 1_555 D DG 6 O6 ? ? E DG 1 E DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? D DG 1 N2 ? ? ? 1_555 D DG 6 N7 ? ? E DG 1 E DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? D DG 1 N7 ? ? ? 1_555 D DG 15 N2 ? ? E DG 1 E DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? D DG 1 O6 ? ? ? 1_555 D DG 15 N1 ? ? E DG 1 E DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? D DG 2 N7 ? ? ? 1_555 D DG 5 N2 ? ? E DG 2 E DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? D DG 2 O6 ? ? ? 1_555 D DG 5 N1 ? ? E DG 2 E DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? D DG 2 N1 ? ? ? 1_555 D DG 14 O6 ? ? E DG 2 E DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? D DG 2 N2 ? ? ? 1_555 D DG 14 N7 ? ? E DG 2 E DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? D DG 5 N7 ? ? ? 1_555 D DG 11 N2 ? ? E DG 5 E DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? D DG 5 O6 ? ? ? 1_555 D DG 11 N1 ? ? E DG 5 E DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? D DG 6 N1 ? ? ? 1_555 D DG 10 O6 ? ? E DG 6 E DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? D DG 6 N2 ? ? ? 1_555 D DG 10 N7 ? ? E DG 6 E DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? D DG 10 N1 ? ? ? 1_555 D DG 15 O6 ? ? E DG 10 E DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? D DG 10 N2 ? ? ? 1_555 D DG 15 N7 ? ? E DG 10 E DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? D DG 11 N7 ? ? ? 1_555 D DG 14 N2 ? ? E DG 11 E DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? D DG 11 O6 ? ? ? 1_555 D DG 14 N1 ? ? E DG 11 E DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? C DG 7 ? D DG 7 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 8 ? D DG 8 ? 1_555 66.7 ? 2 O6 ? C DG 7 ? D DG 7 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 11 ? D DG 11 ? 1_555 110.6 ? 3 O6 ? C DG 8 ? D DG 8 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 11 ? D DG 11 ? 1_555 87.0 ? 4 O6 ? C DG 7 ? D DG 7 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 16 ? D DG 16 ? 1_555 75.7 ? 5 O6 ? C DG 8 ? D DG 8 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 16 ? D DG 16 ? 1_555 135.6 ? 6 O6 ? C DG 11 ? D DG 11 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 16 ? D DG 16 ? 1_555 84.8 ? 7 O6 ? C DG 7 ? D DG 7 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 17 ? D DG 17 ? 1_555 144.7 ? 8 O6 ? C DG 8 ? D DG 8 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 17 ? D DG 17 ? 1_555 147.5 ? 9 O6 ? C DG 11 ? D DG 11 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 17 ? D DG 17 ? 1_555 86.3 ? 10 O6 ? C DG 16 ? D DG 16 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 17 ? D DG 17 ? 1_555 75.3 ? 11 O6 ? C DG 7 ? D DG 7 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 20 ? D DG 20 ? 1_555 87.7 ? 12 O6 ? C DG 8 ? D DG 8 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 20 ? D DG 20 ? 1_555 85.2 ? 13 O6 ? C DG 11 ? D DG 11 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 20 ? D DG 20 ? 1_555 155.2 ? 14 O6 ? C DG 16 ? D DG 16 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 20 ? D DG 20 ? 1_555 116.8 ? 15 O6 ? C DG 17 ? D DG 17 ? 1_555 NA ? G NA . ? D NA 101 ? 1_555 O6 ? C DG 20 ? D DG 20 ? 1_555 87.7 ? 16 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 2 ? E DG 2 ? 1_555 66.2 ? 17 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 5 ? E DG 5 ? 1_555 122.5 ? 18 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 5 ? E DG 5 ? 1_555 77.4 ? 19 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 6 ? E DG 6 ? 1_555 73.5 ? 20 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 6 ? E DG 6 ? 1_555 95.9 ? 21 O6 ? D DG 5 ? E DG 5 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 6 ? E DG 6 ? 1_555 67.6 ? 22 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 10 ? E DG 10 ? 1_555 116.0 ? 23 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 10 ? E DG 10 ? 1_555 164.7 ? 24 O6 ? D DG 5 ? E DG 5 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 10 ? E DG 10 ? 1_555 89.7 ? 25 O6 ? D DG 6 ? E DG 6 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 10 ? E DG 10 ? 1_555 71.2 ? 26 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 11 ? E DG 11 ? 1_555 174.1 ? 27 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 11 ? E DG 11 ? 1_555 115.0 ? 28 O6 ? D DG 5 ? E DG 5 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 11 ? E DG 11 ? 1_555 63.0 ? 29 O6 ? D DG 6 ? E DG 6 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 11 ? E DG 11 ? 1_555 111.7 ? 30 O6 ? D DG 10 ? E DG 10 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 11 ? E DG 11 ? 1_555 64.6 ? 31 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 101.4 ? 32 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 72.5 ? 33 O6 ? D DG 5 ? E DG 5 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 108.3 ? 34 O6 ? D DG 6 ? E DG 6 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 168.4 ? 35 O6 ? D DG 10 ? E DG 10 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 120.1 ? 36 O6 ? D DG 11 ? E DG 11 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 14 ? E DG 14 ? 1_555 74.0 ? 37 O6 ? D DG 1 ? E DG 1 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 67.7 ? 38 O6 ? D DG 2 ? E DG 2 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 114.9 ? 39 O6 ? D DG 5 ? E DG 5 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 167.4 ? 40 O6 ? D DG 6 ? E DG 6 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 112.0 ? 41 O6 ? D DG 10 ? E DG 10 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 78.6 ? 42 O6 ? D DG 11 ? E DG 11 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 107.2 ? 43 O6 ? D DG 14 ? E DG 14 ? 1_555 NA ? H NA . ? E NA 101 ? 1_555 O6 ? D DG 15 ? E DG 15 ? 1_555 74.4 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 0G6 F . ? HIS B 43 ? 0G6 H 302 ? 1_555 HIS H 57 ? 1_555 C3 NE2 HIS 2 0G6 None 'Covalent chemical modification' 2 0G6 F . ? SER B 205 ? 0G6 H 302 ? 1_555 SER H 195 ? 1_555 C2 OG SER 3 0G6 None 'Covalent chemical modification' 3 CYS A 9 ? CYS B 119 ? CYS L 1 ? 1_555 CYS H 122 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 28 ? CYS B 44 ? CYS H 42 ? 1_555 CYS H 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 173 ? CYS B 187 ? CYS H 168 ? 1_555 CYS H 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 201 ? CYS B 231 ? CYS H 191 ? 1_555 CYS H 220 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 AA1 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 AA1 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 AA1 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 AA1 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 AA1 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 AA1 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 AA2 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA2 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 AA2 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 AA2 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 AA2 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 AA2 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 AA2 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA3 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 AA3 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 AA1 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 AA1 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 AA1 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 AA1 5 6 N ILE B 224 ? N ILE H 212 O THR B 241 ? O THR H 229 AA1 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 AA2 1 2 N LEU B 18 ? N LEU H 33 O CYS B 28 ? O CYS H 42 AA2 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 AA2 3 4 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 AA2 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 AA2 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 AA2 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 AA3 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # _pdbx_entry_details.entry_id 5EW1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 H _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 60 _pdbx_validate_close_contact.PDB_ins_code_1 G _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C1 _pdbx_validate_close_contact.auth_asym_id_2 H _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.04 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ L TYR 14 J ? OH L TYR 14 J ? 1.483 1.374 0.109 0.017 N 2 1 "O3'" D DC 3 ? ? P D DC 4 ? ? 1.520 1.607 -0.087 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB H ASP 21 ? ? CG H ASP 21 ? ? OD1 H ASP 21 ? ? 124.76 118.30 6.46 0.90 N 2 1 CB H ASP 21 ? ? CG H ASP 21 ? ? OD2 H ASP 21 ? ? 112.69 118.30 -5.61 0.90 N 3 1 NE H ARG 165 ? ? CZ H ARG 165 ? ? NH1 H ARG 165 ? ? 116.66 120.30 -3.64 0.50 N 4 1 "O5'" D DG 25 ? ? "C5'" D DG 25 ? ? "C4'" D DG 25 ? ? 103.09 109.40 -6.31 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -125.38 -76.46 2 1 HIS H 71 ? ? -135.10 -57.09 3 1 ILE H 79 ? ? -123.38 -51.93 4 1 ASN H 98 ? ? -152.00 16.61 5 1 SER H 115 ? ? -168.22 -168.17 6 1 HIS H 119 ? ? -170.49 131.89 7 1 SER H 214 ? ? -109.48 -62.82 # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id F # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 55.0680 59.3258 9.1011 0.1384 ? 0.0227 ? 0.0554 ? 0.0401 ? 0.0495 ? 0.0971 ? 4.3740 ? -1.5228 ? 0.1342 ? 2.9930 ? 0.9130 ? 4.6796 ? 0.1945 ? 0.2622 ? 0.5636 ? -0.1917 ? -0.3274 ? -0.3086 ? -0.3636 ? -0.0028 ? 0.1329 ? 2 'X-RAY DIFFRACTION' ? refined 53.6303 42.2295 18.3733 0.0240 ? 0.0173 ? 0.0145 ? 0.0297 ? 0.0169 ? 0.0177 ? 1.7022 ? -0.2658 ? 0.2288 ? 1.6864 ? -0.2529 ? 1.0379 ? 0.0711 ? 0.0328 ? 0.0155 ? 0.0374 ? -0.0379 ? -0.0760 ? -0.0141 ? -0.0013 ? -0.0332 ? 3 'X-RAY DIFFRACTION' ? refined 55.2618 20.1568 7.7815 0.2558 ? 0.0589 ? -0.0272 ? 0.1305 ? -0.0530 ? 0.2494 ? 0.6488 ? -0.3415 ? -0.1424 ? 2.2311 ? -0.7460 ? 3.7581 ? 0.0438 ? 0.1065 ? -0.3482 ? -0.0078 ? -0.1227 ? -0.1520 ? 0.5228 ? 0.3107 ? 0.0789 ? 4 'X-RAY DIFFRACTION' ? refined 40.7100 64.9203 34.0931 0.1490 ? 0.0200 ? 0.0248 ? 0.0903 ? -0.0311 ? 0.1462 ? 1.5321 ? 0.7541 ? -1.2880 ? 6.9759 ? -2.6479 ? 2.7403 ? -0.0079 ? -0.3575 ? 0.1890 ? 0.8412 ? -0.0280 ? 0.1066 ? -0.1803 ? 0.3096 ? 0.0360 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? L 1 ? ? L 14 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? H 16 ? ? H 246 ? ? 3 'X-RAY DIFFRACTION' 3 ? ? D 2 ? ? D 27 ? ? 4 'X-RAY DIFFRACTION' 4 ? ? E 1 ? ? E 15 ? ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR -5 ? A THR 1 2 1 Y 1 L PHE -4 ? A PHE 2 3 1 Y 1 L GLY -3 ? A GLY 3 4 1 Y 1 L SER -2 ? A SER 4 5 1 Y 1 L GLY -1 ? A GLY 5 6 1 Y 1 L GLU 0 ? A GLU 6 7 1 Y 1 L ILE 15 ? A ILE 33 8 1 Y 1 L ASP 16 ? A ASP 34 9 1 Y 1 L GLY 17 ? A GLY 35 10 1 Y 1 L ARG 18 ? A ARG 36 11 1 Y 1 H TRP 147 A B TRP 148 12 1 Y 1 H THR 147 B B THR 149 13 1 Y 1 H ALA 147 C B ALA 150 14 1 Y 1 H ASN 147 D B ASN 151 15 1 Y 1 H VAL 147 E B VAL 152 16 1 Y 1 H GLY 147 F B GLY 153 17 1 Y 1 H LYS 147 G B LYS 154 18 1 Y 1 H GLU 247 ? B GLU 259 19 1 Y 1 D DG 1 ? C DG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0G6 N N N N 1 0G6 CA C N R 2 0G6 C C N N 3 0G6 O O N N 4 0G6 CB C N N 5 0G6 CG C Y N 6 0G6 CD1 C Y N 7 0G6 CD2 C Y N 8 0G6 CE1 C Y N 9 0G6 CE2 C Y N 10 0G6 CZ C Y N 11 0G6 N1 N N N 12 0G6 CA1 C N S 13 0G6 C1 C N N 14 0G6 O1 O N N 15 0G6 CB1 C N N 16 0G6 CG1 C N N 17 0G6 CD C N N 18 0G6 N2 N N N 19 0G6 CA2 C N S 20 0G6 C2 C N S 21 0G6 O2 O N N 22 0G6 CB2 C N N 23 0G6 CG2 C N N 24 0G6 CD3 C N N 25 0G6 NE N N N 26 0G6 CZ1 C N N 27 0G6 NH1 N N N 28 0G6 NH2 N N N 29 0G6 C3 C N N 30 0G6 CL CL N N 31 0G6 H H N N 32 0G6 H2 H N N 33 0G6 HA H N N 34 0G6 HB2 H N N 35 0G6 HB3 H N N 36 0G6 HD1 H N N 37 0G6 HD2 H N N 38 0G6 HE1 H N N 39 0G6 HE2 H N N 40 0G6 HZ H N N 41 0G6 HA1 H N N 42 0G6 HB21 H N N 43 0G6 HB31 H N N 44 0G6 HG2 H N N 45 0G6 HG3 H N N 46 0G6 HD21 H N N 47 0G6 HD3 H N N 48 0G6 H1 H N N 49 0G6 HA2 H N N 50 0G6 HB22 H N N 51 0G6 HB32 H N N 52 0G6 HG21 H N N 53 0G6 HG31 H N N 54 0G6 HD22 H N N 55 0G6 HD31 H N N 56 0G6 HE H N N 57 0G6 HH11 H N N 58 0G6 HH12 H N N 59 0G6 HH21 H N N 60 0G6 HH22 H N N 61 0G6 H11 H N N 62 0G6 H21 H N N 63 0G6 H33 H N N 64 0G6 H34 H N N 65 3DR "O5'" O N N 66 3DR P P N N 67 3DR OP1 O N N 68 3DR OP2 O N N 69 3DR OP3 O N N 70 3DR "C2'" C N N 71 3DR "C5'" C N N 72 3DR "C4'" C N R 73 3DR "O4'" O N N 74 3DR "C1'" C N N 75 3DR "C3'" C N S 76 3DR "O3'" O N N 77 3DR HOP2 H N N 78 3DR HOP3 H N N 79 3DR "H2'" H N N 80 3DR "H2''" H N N 81 3DR "H5'" H N N 82 3DR "H5''" H N N 83 3DR "H4'1" H N N 84 3DR "H1'1" H N N 85 3DR "H1'2" H N N 86 3DR "H3'" H N N 87 3DR "HO3'" H N N 88 ALA N N N N 89 ALA CA C N S 90 ALA C C N N 91 ALA O O N N 92 ALA CB C N N 93 ALA OXT O N N 94 ALA H H N N 95 ALA H2 H N N 96 ALA HA H N N 97 ALA HB1 H N N 98 ALA HB2 H N N 99 ALA HB3 H N N 100 ALA HXT H N N 101 ARG N N N N 102 ARG CA C N S 103 ARG C C N N 104 ARG O O N N 105 ARG CB C N N 106 ARG CG C N N 107 ARG CD C N N 108 ARG NE N N N 109 ARG CZ C N N 110 ARG NH1 N N N 111 ARG NH2 N N N 112 ARG OXT O N N 113 ARG H H N N 114 ARG H2 H N N 115 ARG HA H N N 116 ARG HB2 H N N 117 ARG HB3 H N N 118 ARG HG2 H N N 119 ARG HG3 H N N 120 ARG HD2 H N N 121 ARG HD3 H N N 122 ARG HE H N N 123 ARG HH11 H N N 124 ARG HH12 H N N 125 ARG HH21 H N N 126 ARG HH22 H N N 127 ARG HXT H N N 128 ASN N N N N 129 ASN CA C N S 130 ASN C C N N 131 ASN O O N N 132 ASN CB C N N 133 ASN CG C N N 134 ASN OD1 O N N 135 ASN ND2 N N N 136 ASN OXT O N N 137 ASN H H N N 138 ASN H2 H N N 139 ASN HA H N N 140 ASN HB2 H N N 141 ASN HB3 H N N 142 ASN HD21 H N N 143 ASN HD22 H N N 144 ASN HXT H N N 145 ASP N N N N 146 ASP CA C N S 147 ASP C C N N 148 ASP O O N N 149 ASP CB C N N 150 ASP CG C N N 151 ASP OD1 O N N 152 ASP OD2 O N N 153 ASP OXT O N N 154 ASP H H N N 155 ASP H2 H N N 156 ASP HA H N N 157 ASP HB2 H N N 158 ASP HB3 H N N 159 ASP HD2 H N N 160 ASP HXT H N N 161 CYS N N N N 162 CYS CA C N R 163 CYS C C N N 164 CYS O O N N 165 CYS CB C N N 166 CYS SG S N N 167 CYS OXT O N N 168 CYS H H N N 169 CYS H2 H N N 170 CYS HA H N N 171 CYS HB2 H N N 172 CYS HB3 H N N 173 CYS HG H N N 174 CYS HXT H N N 175 DA OP3 O N N 176 DA P P N N 177 DA OP1 O N N 178 DA OP2 O N N 179 DA "O5'" O N N 180 DA "C5'" C N N 181 DA "C4'" C N R 182 DA "O4'" O N N 183 DA "C3'" C N S 184 DA "O3'" O N N 185 DA "C2'" C N N 186 DA "C1'" C N R 187 DA N9 N Y N 188 DA C8 C Y N 189 DA N7 N Y N 190 DA C5 C Y N 191 DA C6 C Y N 192 DA N6 N N N 193 DA N1 N Y N 194 DA C2 C Y N 195 DA N3 N Y N 196 DA C4 C Y N 197 DA HOP3 H N N 198 DA HOP2 H N N 199 DA "H5'" H N N 200 DA "H5''" H N N 201 DA "H4'" H N N 202 DA "H3'" H N N 203 DA "HO3'" H N N 204 DA "H2'" H N N 205 DA "H2''" H N N 206 DA "H1'" H N N 207 DA H8 H N N 208 DA H61 H N N 209 DA H62 H N N 210 DA H2 H N N 211 DC OP3 O N N 212 DC P P N N 213 DC OP1 O N N 214 DC OP2 O N N 215 DC "O5'" O N N 216 DC "C5'" C N N 217 DC "C4'" C N R 218 DC "O4'" O N N 219 DC "C3'" C N S 220 DC "O3'" O N N 221 DC "C2'" C N N 222 DC "C1'" C N R 223 DC N1 N N N 224 DC C2 C N N 225 DC O2 O N N 226 DC N3 N N N 227 DC C4 C N N 228 DC N4 N N N 229 DC C5 C N N 230 DC C6 C N N 231 DC HOP3 H N N 232 DC HOP2 H N N 233 DC "H5'" H N N 234 DC "H5''" H N N 235 DC "H4'" H N N 236 DC "H3'" H N N 237 DC "HO3'" H N N 238 DC "H2'" H N N 239 DC "H2''" H N N 240 DC "H1'" H N N 241 DC H41 H N N 242 DC H42 H N N 243 DC H5 H N N 244 DC H6 H N N 245 DG OP3 O N N 246 DG P P N N 247 DG OP1 O N N 248 DG OP2 O N N 249 DG "O5'" O N N 250 DG "C5'" C N N 251 DG "C4'" C N R 252 DG "O4'" O N N 253 DG "C3'" C N S 254 DG "O3'" O N N 255 DG "C2'" C N N 256 DG "C1'" C N R 257 DG N9 N Y N 258 DG C8 C Y N 259 DG N7 N Y N 260 DG C5 C Y N 261 DG C6 C N N 262 DG O6 O N N 263 DG N1 N N N 264 DG C2 C N N 265 DG N2 N N N 266 DG N3 N N N 267 DG C4 C Y N 268 DG HOP3 H N N 269 DG HOP2 H N N 270 DG "H5'" H N N 271 DG "H5''" H N N 272 DG "H4'" H N N 273 DG "H3'" H N N 274 DG "HO3'" H N N 275 DG "H2'" H N N 276 DG "H2''" H N N 277 DG "H1'" H N N 278 DG H8 H N N 279 DG H1 H N N 280 DG H21 H N N 281 DG H22 H N N 282 DT OP3 O N N 283 DT P P N N 284 DT OP1 O N N 285 DT OP2 O N N 286 DT "O5'" O N N 287 DT "C5'" C N N 288 DT "C4'" C N R 289 DT "O4'" O N N 290 DT "C3'" C N S 291 DT "O3'" O N N 292 DT "C2'" C N N 293 DT "C1'" C N R 294 DT N1 N N N 295 DT C2 C N N 296 DT O2 O N N 297 DT N3 N N N 298 DT C4 C N N 299 DT O4 O N N 300 DT C5 C N N 301 DT C7 C N N 302 DT C6 C N N 303 DT HOP3 H N N 304 DT HOP2 H N N 305 DT "H5'" H N N 306 DT "H5''" H N N 307 DT "H4'" H N N 308 DT "H3'" H N N 309 DT "HO3'" H N N 310 DT "H2'" H N N 311 DT "H2''" H N N 312 DT "H1'" H N N 313 DT H3 H N N 314 DT H71 H N N 315 DT H72 H N N 316 DT H73 H N N 317 DT H6 H N N 318 GLN N N N N 319 GLN CA C N S 320 GLN C C N N 321 GLN O O N N 322 GLN CB C N N 323 GLN CG C N N 324 GLN CD C N N 325 GLN OE1 O N N 326 GLN NE2 N N N 327 GLN OXT O N N 328 GLN H H N N 329 GLN H2 H N N 330 GLN HA H N N 331 GLN HB2 H N N 332 GLN HB3 H N N 333 GLN HG2 H N N 334 GLN HG3 H N N 335 GLN HE21 H N N 336 GLN HE22 H N N 337 GLN HXT H N N 338 GLU N N N N 339 GLU CA C N S 340 GLU C C N N 341 GLU O O N N 342 GLU CB C N N 343 GLU CG C N N 344 GLU CD C N N 345 GLU OE1 O N N 346 GLU OE2 O N N 347 GLU OXT O N N 348 GLU H H N N 349 GLU H2 H N N 350 GLU HA H N N 351 GLU HB2 H N N 352 GLU HB3 H N N 353 GLU HG2 H N N 354 GLU HG3 H N N 355 GLU HE2 H N N 356 GLU HXT H N N 357 GLY N N N N 358 GLY CA C N N 359 GLY C C N N 360 GLY O O N N 361 GLY OXT O N N 362 GLY H H N N 363 GLY H2 H N N 364 GLY HA2 H N N 365 GLY HA3 H N N 366 GLY HXT H N N 367 HIS N N N N 368 HIS CA C N S 369 HIS C C N N 370 HIS O O N N 371 HIS CB C N N 372 HIS CG C Y N 373 HIS ND1 N Y N 374 HIS CD2 C Y N 375 HIS CE1 C Y N 376 HIS NE2 N Y N 377 HIS OXT O N N 378 HIS H H N N 379 HIS H2 H N N 380 HIS HA H N N 381 HIS HB2 H N N 382 HIS HB3 H N N 383 HIS HD1 H N N 384 HIS HD2 H N N 385 HIS HE1 H N N 386 HIS HE2 H N N 387 HIS HXT H N N 388 HOH O O N N 389 HOH H1 H N N 390 HOH H2 H N N 391 ILE N N N N 392 ILE CA C N S 393 ILE C C N N 394 ILE O O N N 395 ILE CB C N S 396 ILE CG1 C N N 397 ILE CG2 C N N 398 ILE CD1 C N N 399 ILE OXT O N N 400 ILE H H N N 401 ILE H2 H N N 402 ILE HA H N N 403 ILE HB H N N 404 ILE HG12 H N N 405 ILE HG13 H N N 406 ILE HG21 H N N 407 ILE HG22 H N N 408 ILE HG23 H N N 409 ILE HD11 H N N 410 ILE HD12 H N N 411 ILE HD13 H N N 412 ILE HXT H N N 413 LEU N N N N 414 LEU CA C N S 415 LEU C C N N 416 LEU O O N N 417 LEU CB C N N 418 LEU CG C N N 419 LEU CD1 C N N 420 LEU CD2 C N N 421 LEU OXT O N N 422 LEU H H N N 423 LEU H2 H N N 424 LEU HA H N N 425 LEU HB2 H N N 426 LEU HB3 H N N 427 LEU HG H N N 428 LEU HD11 H N N 429 LEU HD12 H N N 430 LEU HD13 H N N 431 LEU HD21 H N N 432 LEU HD22 H N N 433 LEU HD23 H N N 434 LEU HXT H N N 435 LYS N N N N 436 LYS CA C N S 437 LYS C C N N 438 LYS O O N N 439 LYS CB C N N 440 LYS CG C N N 441 LYS CD C N N 442 LYS CE C N N 443 LYS NZ N N N 444 LYS OXT O N N 445 LYS H H N N 446 LYS H2 H N N 447 LYS HA H N N 448 LYS HB2 H N N 449 LYS HB3 H N N 450 LYS HG2 H N N 451 LYS HG3 H N N 452 LYS HD2 H N N 453 LYS HD3 H N N 454 LYS HE2 H N N 455 LYS HE3 H N N 456 LYS HZ1 H N N 457 LYS HZ2 H N N 458 LYS HZ3 H N N 459 LYS HXT H N N 460 MET N N N N 461 MET CA C N S 462 MET C C N N 463 MET O O N N 464 MET CB C N N 465 MET CG C N N 466 MET SD S N N 467 MET CE C N N 468 MET OXT O N N 469 MET H H N N 470 MET H2 H N N 471 MET HA H N N 472 MET HB2 H N N 473 MET HB3 H N N 474 MET HG2 H N N 475 MET HG3 H N N 476 MET HE1 H N N 477 MET HE2 H N N 478 MET HE3 H N N 479 MET HXT H N N 480 NA NA NA N N 481 NAG C1 C N R 482 NAG C2 C N R 483 NAG C3 C N R 484 NAG C4 C N S 485 NAG C5 C N R 486 NAG C6 C N N 487 NAG C7 C N N 488 NAG C8 C N N 489 NAG N2 N N N 490 NAG O1 O N N 491 NAG O3 O N N 492 NAG O4 O N N 493 NAG O5 O N N 494 NAG O6 O N N 495 NAG O7 O N N 496 NAG H1 H N N 497 NAG H2 H N N 498 NAG H3 H N N 499 NAG H4 H N N 500 NAG H5 H N N 501 NAG H61 H N N 502 NAG H62 H N N 503 NAG H81 H N N 504 NAG H82 H N N 505 NAG H83 H N N 506 NAG HN2 H N N 507 NAG HO1 H N N 508 NAG HO3 H N N 509 NAG HO4 H N N 510 NAG HO6 H N N 511 PHE N N N N 512 PHE CA C N S 513 PHE C C N N 514 PHE O O N N 515 PHE CB C N N 516 PHE CG C Y N 517 PHE CD1 C Y N 518 PHE CD2 C Y N 519 PHE CE1 C Y N 520 PHE CE2 C Y N 521 PHE CZ C Y N 522 PHE OXT O N N 523 PHE H H N N 524 PHE H2 H N N 525 PHE HA H N N 526 PHE HB2 H N N 527 PHE HB3 H N N 528 PHE HD1 H N N 529 PHE HD2 H N N 530 PHE HE1 H N N 531 PHE HE2 H N N 532 PHE HZ H N N 533 PHE HXT H N N 534 PRO N N N N 535 PRO CA C N S 536 PRO C C N N 537 PRO O O N N 538 PRO CB C N N 539 PRO CG C N N 540 PRO CD C N N 541 PRO OXT O N N 542 PRO H H N N 543 PRO HA H N N 544 PRO HB2 H N N 545 PRO HB3 H N N 546 PRO HG2 H N N 547 PRO HG3 H N N 548 PRO HD2 H N N 549 PRO HD3 H N N 550 PRO HXT H N N 551 SER N N N N 552 SER CA C N S 553 SER C C N N 554 SER O O N N 555 SER CB C N N 556 SER OG O N N 557 SER OXT O N N 558 SER H H N N 559 SER H2 H N N 560 SER HA H N N 561 SER HB2 H N N 562 SER HB3 H N N 563 SER HG H N N 564 SER HXT H N N 565 THR N N N N 566 THR CA C N S 567 THR C C N N 568 THR O O N N 569 THR CB C N R 570 THR OG1 O N N 571 THR CG2 C N N 572 THR OXT O N N 573 THR H H N N 574 THR H2 H N N 575 THR HA H N N 576 THR HB H N N 577 THR HG1 H N N 578 THR HG21 H N N 579 THR HG22 H N N 580 THR HG23 H N N 581 THR HXT H N N 582 TRP N N N N 583 TRP CA C N S 584 TRP C C N N 585 TRP O O N N 586 TRP CB C N N 587 TRP CG C Y N 588 TRP CD1 C Y N 589 TRP CD2 C Y N 590 TRP NE1 N Y N 591 TRP CE2 C Y N 592 TRP CE3 C Y N 593 TRP CZ2 C Y N 594 TRP CZ3 C Y N 595 TRP CH2 C Y N 596 TRP OXT O N N 597 TRP H H N N 598 TRP H2 H N N 599 TRP HA H N N 600 TRP HB2 H N N 601 TRP HB3 H N N 602 TRP HD1 H N N 603 TRP HE1 H N N 604 TRP HE3 H N N 605 TRP HZ2 H N N 606 TRP HZ3 H N N 607 TRP HH2 H N N 608 TRP HXT H N N 609 TYR N N N N 610 TYR CA C N S 611 TYR C C N N 612 TYR O O N N 613 TYR CB C N N 614 TYR CG C Y N 615 TYR CD1 C Y N 616 TYR CD2 C Y N 617 TYR CE1 C Y N 618 TYR CE2 C Y N 619 TYR CZ C Y N 620 TYR OH O N N 621 TYR OXT O N N 622 TYR H H N N 623 TYR H2 H N N 624 TYR HA H N N 625 TYR HB2 H N N 626 TYR HB3 H N N 627 TYR HD1 H N N 628 TYR HD2 H N N 629 TYR HE1 H N N 630 TYR HE2 H N N 631 TYR HH H N N 632 TYR HXT H N N 633 VAL N N N N 634 VAL CA C N S 635 VAL C C N N 636 VAL O O N N 637 VAL CB C N N 638 VAL CG1 C N N 639 VAL CG2 C N N 640 VAL OXT O N N 641 VAL H H N N 642 VAL H2 H N N 643 VAL HA H N N 644 VAL HB H N N 645 VAL HG11 H N N 646 VAL HG12 H N N 647 VAL HG13 H N N 648 VAL HG21 H N N 649 VAL HG22 H N N 650 VAL HG23 H N N 651 VAL HXT H N N 652 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G6 N CA sing N N 1 0G6 N H sing N N 2 0G6 N H2 sing N N 3 0G6 CA C sing N N 4 0G6 CA CB sing N N 5 0G6 CA HA sing N N 6 0G6 C O doub N N 7 0G6 C N1 sing N N 8 0G6 CB CG sing N N 9 0G6 CB HB2 sing N N 10 0G6 CB HB3 sing N N 11 0G6 CG CD1 doub Y N 12 0G6 CG CD2 sing Y N 13 0G6 CD1 CE1 sing Y N 14 0G6 CD1 HD1 sing N N 15 0G6 CD2 CE2 doub Y N 16 0G6 CD2 HD2 sing N N 17 0G6 CE1 CZ doub Y N 18 0G6 CE1 HE1 sing N N 19 0G6 CE2 CZ sing Y N 20 0G6 CE2 HE2 sing N N 21 0G6 CZ HZ sing N N 22 0G6 N1 CA1 sing N N 23 0G6 N1 CD sing N N 24 0G6 CA1 C1 sing N N 25 0G6 CA1 CB1 sing N N 26 0G6 CA1 HA1 sing N N 27 0G6 C1 O1 doub N N 28 0G6 C1 N2 sing N N 29 0G6 CB1 CG1 sing N N 30 0G6 CB1 HB21 sing N N 31 0G6 CB1 HB31 sing N N 32 0G6 CG1 CD sing N N 33 0G6 CG1 HG2 sing N N 34 0G6 CG1 HG3 sing N N 35 0G6 CD HD21 sing N N 36 0G6 CD HD3 sing N N 37 0G6 N2 CA2 sing N N 38 0G6 N2 H1 sing N N 39 0G6 CA2 C2 sing N N 40 0G6 CA2 CB2 sing N N 41 0G6 CA2 HA2 sing N N 42 0G6 C2 O2 sing N N 43 0G6 C2 C3 sing N N 44 0G6 CB2 CG2 sing N N 45 0G6 CB2 HB22 sing N N 46 0G6 CB2 HB32 sing N N 47 0G6 CG2 CD3 sing N N 48 0G6 CG2 HG21 sing N N 49 0G6 CG2 HG31 sing N N 50 0G6 CD3 NE sing N N 51 0G6 CD3 HD22 sing N N 52 0G6 CD3 HD31 sing N N 53 0G6 NE CZ1 sing N N 54 0G6 NE HE sing N N 55 0G6 CZ1 NH1 sing N N 56 0G6 CZ1 NH2 doub N N 57 0G6 NH1 HH11 sing N N 58 0G6 NH1 HH12 sing N N 59 0G6 NH2 HH21 sing N N 60 0G6 NH2 HH22 sing N N 61 0G6 C3 H11 sing N N 62 0G6 C3 H21 sing N N 63 0G6 CL C3 sing N N 64 0G6 C2 H33 sing N N 65 0G6 O2 H34 sing N N 66 3DR "O5'" P sing N N 67 3DR "O5'" "C5'" sing N N 68 3DR P OP1 doub N N 69 3DR P OP2 sing N N 70 3DR P OP3 sing N N 71 3DR OP2 HOP2 sing N N 72 3DR OP3 HOP3 sing N N 73 3DR "C2'" "C1'" sing N N 74 3DR "C2'" "C3'" sing N N 75 3DR "C2'" "H2'" sing N N 76 3DR "C2'" "H2''" sing N N 77 3DR "C5'" "C4'" sing N N 78 3DR "C5'" "H5'" sing N N 79 3DR "C5'" "H5''" sing N N 80 3DR "C4'" "O4'" sing N N 81 3DR "C4'" "C3'" sing N N 82 3DR "C4'" "H4'1" sing N N 83 3DR "O4'" "C1'" sing N N 84 3DR "C1'" "H1'1" sing N N 85 3DR "C1'" "H1'2" sing N N 86 3DR "C3'" "O3'" sing N N 87 3DR "C3'" "H3'" sing N N 88 3DR "O3'" "HO3'" sing N N 89 ALA N CA sing N N 90 ALA N H sing N N 91 ALA N H2 sing N N 92 ALA CA C sing N N 93 ALA CA CB sing N N 94 ALA CA HA sing N N 95 ALA C O doub N N 96 ALA C OXT sing N N 97 ALA CB HB1 sing N N 98 ALA CB HB2 sing N N 99 ALA CB HB3 sing N N 100 ALA OXT HXT sing N N 101 ARG N CA sing N N 102 ARG N H sing N N 103 ARG N H2 sing N N 104 ARG CA C sing N N 105 ARG CA CB sing N N 106 ARG CA HA sing N N 107 ARG C O doub N N 108 ARG C OXT sing N N 109 ARG CB CG sing N N 110 ARG CB HB2 sing N N 111 ARG CB HB3 sing N N 112 ARG CG CD sing N N 113 ARG CG HG2 sing N N 114 ARG CG HG3 sing N N 115 ARG CD NE sing N N 116 ARG CD HD2 sing N N 117 ARG CD HD3 sing N N 118 ARG NE CZ sing N N 119 ARG NE HE sing N N 120 ARG CZ NH1 sing N N 121 ARG CZ NH2 doub N N 122 ARG NH1 HH11 sing N N 123 ARG NH1 HH12 sing N N 124 ARG NH2 HH21 sing N N 125 ARG NH2 HH22 sing N N 126 ARG OXT HXT sing N N 127 ASN N CA sing N N 128 ASN N H sing N N 129 ASN N H2 sing N N 130 ASN CA C sing N N 131 ASN CA CB sing N N 132 ASN CA HA sing N N 133 ASN C O doub N N 134 ASN C OXT sing N N 135 ASN CB CG sing N N 136 ASN CB HB2 sing N N 137 ASN CB HB3 sing N N 138 ASN CG OD1 doub N N 139 ASN CG ND2 sing N N 140 ASN ND2 HD21 sing N N 141 ASN ND2 HD22 sing N N 142 ASN OXT HXT sing N N 143 ASP N CA sing N N 144 ASP N H sing N N 145 ASP N H2 sing N N 146 ASP CA C sing N N 147 ASP CA CB sing N N 148 ASP CA HA sing N N 149 ASP C O doub N N 150 ASP C OXT sing N N 151 ASP CB CG sing N N 152 ASP CB HB2 sing N N 153 ASP CB HB3 sing N N 154 ASP CG OD1 doub N N 155 ASP CG OD2 sing N N 156 ASP OD2 HD2 sing N N 157 ASP OXT HXT sing N N 158 CYS N CA sing N N 159 CYS N H sing N N 160 CYS N H2 sing N N 161 CYS CA C sing N N 162 CYS CA CB sing N N 163 CYS CA HA sing N N 164 CYS C O doub N N 165 CYS C OXT sing N N 166 CYS CB SG sing N N 167 CYS CB HB2 sing N N 168 CYS CB HB3 sing N N 169 CYS SG HG sing N N 170 CYS OXT HXT sing N N 171 DA OP3 P sing N N 172 DA OP3 HOP3 sing N N 173 DA P OP1 doub N N 174 DA P OP2 sing N N 175 DA P "O5'" sing N N 176 DA OP2 HOP2 sing N N 177 DA "O5'" "C5'" sing N N 178 DA "C5'" "C4'" sing N N 179 DA "C5'" "H5'" sing N N 180 DA "C5'" "H5''" sing N N 181 DA "C4'" "O4'" sing N N 182 DA "C4'" "C3'" sing N N 183 DA "C4'" "H4'" sing N N 184 DA "O4'" "C1'" sing N N 185 DA "C3'" "O3'" sing N N 186 DA "C3'" "C2'" sing N N 187 DA "C3'" "H3'" sing N N 188 DA "O3'" "HO3'" sing N N 189 DA "C2'" "C1'" sing N N 190 DA "C2'" "H2'" sing N N 191 DA "C2'" "H2''" sing N N 192 DA "C1'" N9 sing N N 193 DA "C1'" "H1'" sing N N 194 DA N9 C8 sing Y N 195 DA N9 C4 sing Y N 196 DA C8 N7 doub Y N 197 DA C8 H8 sing N N 198 DA N7 C5 sing Y N 199 DA C5 C6 sing Y N 200 DA C5 C4 doub Y N 201 DA C6 N6 sing N N 202 DA C6 N1 doub Y N 203 DA N6 H61 sing N N 204 DA N6 H62 sing N N 205 DA N1 C2 sing Y N 206 DA C2 N3 doub Y N 207 DA C2 H2 sing N N 208 DA N3 C4 sing Y N 209 DC OP3 P sing N N 210 DC OP3 HOP3 sing N N 211 DC P OP1 doub N N 212 DC P OP2 sing N N 213 DC P "O5'" sing N N 214 DC OP2 HOP2 sing N N 215 DC "O5'" "C5'" sing N N 216 DC "C5'" "C4'" sing N N 217 DC "C5'" "H5'" sing N N 218 DC "C5'" "H5''" sing N N 219 DC "C4'" "O4'" sing N N 220 DC "C4'" "C3'" sing N N 221 DC "C4'" "H4'" sing N N 222 DC "O4'" "C1'" sing N N 223 DC "C3'" "O3'" sing N N 224 DC "C3'" "C2'" sing N N 225 DC "C3'" "H3'" sing N N 226 DC "O3'" "HO3'" sing N N 227 DC "C2'" "C1'" sing N N 228 DC "C2'" "H2'" sing N N 229 DC "C2'" "H2''" sing N N 230 DC "C1'" N1 sing N N 231 DC "C1'" "H1'" sing N N 232 DC N1 C2 sing N N 233 DC N1 C6 sing N N 234 DC C2 O2 doub N N 235 DC C2 N3 sing N N 236 DC N3 C4 doub N N 237 DC C4 N4 sing N N 238 DC C4 C5 sing N N 239 DC N4 H41 sing N N 240 DC N4 H42 sing N N 241 DC C5 C6 doub N N 242 DC C5 H5 sing N N 243 DC C6 H6 sing N N 244 DG OP3 P sing N N 245 DG OP3 HOP3 sing N N 246 DG P OP1 doub N N 247 DG P OP2 sing N N 248 DG P "O5'" sing N N 249 DG OP2 HOP2 sing N N 250 DG "O5'" "C5'" sing N N 251 DG "C5'" "C4'" sing N N 252 DG "C5'" "H5'" sing N N 253 DG "C5'" "H5''" sing N N 254 DG "C4'" "O4'" sing N N 255 DG "C4'" "C3'" sing N N 256 DG "C4'" "H4'" sing N N 257 DG "O4'" "C1'" sing N N 258 DG "C3'" "O3'" sing N N 259 DG "C3'" "C2'" sing N N 260 DG "C3'" "H3'" sing N N 261 DG "O3'" "HO3'" sing N N 262 DG "C2'" "C1'" sing N N 263 DG "C2'" "H2'" sing N N 264 DG "C2'" "H2''" sing N N 265 DG "C1'" N9 sing N N 266 DG "C1'" "H1'" sing N N 267 DG N9 C8 sing Y N 268 DG N9 C4 sing Y N 269 DG C8 N7 doub Y N 270 DG C8 H8 sing N N 271 DG N7 C5 sing Y N 272 DG C5 C6 sing N N 273 DG C5 C4 doub Y N 274 DG C6 O6 doub N N 275 DG C6 N1 sing N N 276 DG N1 C2 sing N N 277 DG N1 H1 sing N N 278 DG C2 N2 sing N N 279 DG C2 N3 doub N N 280 DG N2 H21 sing N N 281 DG N2 H22 sing N N 282 DG N3 C4 sing N N 283 DT OP3 P sing N N 284 DT OP3 HOP3 sing N N 285 DT P OP1 doub N N 286 DT P OP2 sing N N 287 DT P "O5'" sing N N 288 DT OP2 HOP2 sing N N 289 DT "O5'" "C5'" sing N N 290 DT "C5'" "C4'" sing N N 291 DT "C5'" "H5'" sing N N 292 DT "C5'" "H5''" sing N N 293 DT "C4'" "O4'" sing N N 294 DT "C4'" "C3'" sing N N 295 DT "C4'" "H4'" sing N N 296 DT "O4'" "C1'" sing N N 297 DT "C3'" "O3'" sing N N 298 DT "C3'" "C2'" sing N N 299 DT "C3'" "H3'" sing N N 300 DT "O3'" "HO3'" sing N N 301 DT "C2'" "C1'" sing N N 302 DT "C2'" "H2'" sing N N 303 DT "C2'" "H2''" sing N N 304 DT "C1'" N1 sing N N 305 DT "C1'" "H1'" sing N N 306 DT N1 C2 sing N N 307 DT N1 C6 sing N N 308 DT C2 O2 doub N N 309 DT C2 N3 sing N N 310 DT N3 C4 sing N N 311 DT N3 H3 sing N N 312 DT C4 O4 doub N N 313 DT C4 C5 sing N N 314 DT C5 C7 sing N N 315 DT C5 C6 doub N N 316 DT C7 H71 sing N N 317 DT C7 H72 sing N N 318 DT C7 H73 sing N N 319 DT C6 H6 sing N N 320 GLN N CA sing N N 321 GLN N H sing N N 322 GLN N H2 sing N N 323 GLN CA C sing N N 324 GLN CA CB sing N N 325 GLN CA HA sing N N 326 GLN C O doub N N 327 GLN C OXT sing N N 328 GLN CB CG sing N N 329 GLN CB HB2 sing N N 330 GLN CB HB3 sing N N 331 GLN CG CD sing N N 332 GLN CG HG2 sing N N 333 GLN CG HG3 sing N N 334 GLN CD OE1 doub N N 335 GLN CD NE2 sing N N 336 GLN NE2 HE21 sing N N 337 GLN NE2 HE22 sing N N 338 GLN OXT HXT sing N N 339 GLU N CA sing N N 340 GLU N H sing N N 341 GLU N H2 sing N N 342 GLU CA C sing N N 343 GLU CA CB sing N N 344 GLU CA HA sing N N 345 GLU C O doub N N 346 GLU C OXT sing N N 347 GLU CB CG sing N N 348 GLU CB HB2 sing N N 349 GLU CB HB3 sing N N 350 GLU CG CD sing N N 351 GLU CG HG2 sing N N 352 GLU CG HG3 sing N N 353 GLU CD OE1 doub N N 354 GLU CD OE2 sing N N 355 GLU OE2 HE2 sing N N 356 GLU OXT HXT sing N N 357 GLY N CA sing N N 358 GLY N H sing N N 359 GLY N H2 sing N N 360 GLY CA C sing N N 361 GLY CA HA2 sing N N 362 GLY CA HA3 sing N N 363 GLY C O doub N N 364 GLY C OXT sing N N 365 GLY OXT HXT sing N N 366 HIS N CA sing N N 367 HIS N H sing N N 368 HIS N H2 sing N N 369 HIS CA C sing N N 370 HIS CA CB sing N N 371 HIS CA HA sing N N 372 HIS C O doub N N 373 HIS C OXT sing N N 374 HIS CB CG sing N N 375 HIS CB HB2 sing N N 376 HIS CB HB3 sing N N 377 HIS CG ND1 sing Y N 378 HIS CG CD2 doub Y N 379 HIS ND1 CE1 doub Y N 380 HIS ND1 HD1 sing N N 381 HIS CD2 NE2 sing Y N 382 HIS CD2 HD2 sing N N 383 HIS CE1 NE2 sing Y N 384 HIS CE1 HE1 sing N N 385 HIS NE2 HE2 sing N N 386 HIS OXT HXT sing N N 387 HOH O H1 sing N N 388 HOH O H2 sing N N 389 ILE N CA sing N N 390 ILE N H sing N N 391 ILE N H2 sing N N 392 ILE CA C sing N N 393 ILE CA CB sing N N 394 ILE CA HA sing N N 395 ILE C O doub N N 396 ILE C OXT sing N N 397 ILE CB CG1 sing N N 398 ILE CB CG2 sing N N 399 ILE CB HB sing N N 400 ILE CG1 CD1 sing N N 401 ILE CG1 HG12 sing N N 402 ILE CG1 HG13 sing N N 403 ILE CG2 HG21 sing N N 404 ILE CG2 HG22 sing N N 405 ILE CG2 HG23 sing N N 406 ILE CD1 HD11 sing N N 407 ILE CD1 HD12 sing N N 408 ILE CD1 HD13 sing N N 409 ILE OXT HXT sing N N 410 LEU N CA sing N N 411 LEU N H sing N N 412 LEU N H2 sing N N 413 LEU CA C sing N N 414 LEU CA CB sing N N 415 LEU CA HA sing N N 416 LEU C O doub N N 417 LEU C OXT sing N N 418 LEU CB CG sing N N 419 LEU CB HB2 sing N N 420 LEU CB HB3 sing N N 421 LEU CG CD1 sing N N 422 LEU CG CD2 sing N N 423 LEU CG HG sing N N 424 LEU CD1 HD11 sing N N 425 LEU CD1 HD12 sing N N 426 LEU CD1 HD13 sing N N 427 LEU CD2 HD21 sing N N 428 LEU CD2 HD22 sing N N 429 LEU CD2 HD23 sing N N 430 LEU OXT HXT sing N N 431 LYS N CA sing N N 432 LYS N H sing N N 433 LYS N H2 sing N N 434 LYS CA C sing N N 435 LYS CA CB sing N N 436 LYS CA HA sing N N 437 LYS C O doub N N 438 LYS C OXT sing N N 439 LYS CB CG sing N N 440 LYS CB HB2 sing N N 441 LYS CB HB3 sing N N 442 LYS CG CD sing N N 443 LYS CG HG2 sing N N 444 LYS CG HG3 sing N N 445 LYS CD CE sing N N 446 LYS CD HD2 sing N N 447 LYS CD HD3 sing N N 448 LYS CE NZ sing N N 449 LYS CE HE2 sing N N 450 LYS CE HE3 sing N N 451 LYS NZ HZ1 sing N N 452 LYS NZ HZ2 sing N N 453 LYS NZ HZ3 sing N N 454 LYS OXT HXT sing N N 455 MET N CA sing N N 456 MET N H sing N N 457 MET N H2 sing N N 458 MET CA C sing N N 459 MET CA CB sing N N 460 MET CA HA sing N N 461 MET C O doub N N 462 MET C OXT sing N N 463 MET CB CG sing N N 464 MET CB HB2 sing N N 465 MET CB HB3 sing N N 466 MET CG SD sing N N 467 MET CG HG2 sing N N 468 MET CG HG3 sing N N 469 MET SD CE sing N N 470 MET CE HE1 sing N N 471 MET CE HE2 sing N N 472 MET CE HE3 sing N N 473 MET OXT HXT sing N N 474 NAG C1 C2 sing N N 475 NAG C1 O1 sing N N 476 NAG C1 O5 sing N N 477 NAG C1 H1 sing N N 478 NAG C2 C3 sing N N 479 NAG C2 N2 sing N N 480 NAG C2 H2 sing N N 481 NAG C3 C4 sing N N 482 NAG C3 O3 sing N N 483 NAG C3 H3 sing N N 484 NAG C4 C5 sing N N 485 NAG C4 O4 sing N N 486 NAG C4 H4 sing N N 487 NAG C5 C6 sing N N 488 NAG C5 O5 sing N N 489 NAG C5 H5 sing N N 490 NAG C6 O6 sing N N 491 NAG C6 H61 sing N N 492 NAG C6 H62 sing N N 493 NAG C7 C8 sing N N 494 NAG C7 N2 sing N N 495 NAG C7 O7 doub N N 496 NAG C8 H81 sing N N 497 NAG C8 H82 sing N N 498 NAG C8 H83 sing N N 499 NAG N2 HN2 sing N N 500 NAG O1 HO1 sing N N 501 NAG O3 HO3 sing N N 502 NAG O4 HO4 sing N N 503 NAG O6 HO6 sing N N 504 PHE N CA sing N N 505 PHE N H sing N N 506 PHE N H2 sing N N 507 PHE CA C sing N N 508 PHE CA CB sing N N 509 PHE CA HA sing N N 510 PHE C O doub N N 511 PHE C OXT sing N N 512 PHE CB CG sing N N 513 PHE CB HB2 sing N N 514 PHE CB HB3 sing N N 515 PHE CG CD1 doub Y N 516 PHE CG CD2 sing Y N 517 PHE CD1 CE1 sing Y N 518 PHE CD1 HD1 sing N N 519 PHE CD2 CE2 doub Y N 520 PHE CD2 HD2 sing N N 521 PHE CE1 CZ doub Y N 522 PHE CE1 HE1 sing N N 523 PHE CE2 CZ sing Y N 524 PHE CE2 HE2 sing N N 525 PHE CZ HZ sing N N 526 PHE OXT HXT sing N N 527 PRO N CA sing N N 528 PRO N CD sing N N 529 PRO N H sing N N 530 PRO CA C sing N N 531 PRO CA CB sing N N 532 PRO CA HA sing N N 533 PRO C O doub N N 534 PRO C OXT sing N N 535 PRO CB CG sing N N 536 PRO CB HB2 sing N N 537 PRO CB HB3 sing N N 538 PRO CG CD sing N N 539 PRO CG HG2 sing N N 540 PRO CG HG3 sing N N 541 PRO CD HD2 sing N N 542 PRO CD HD3 sing N N 543 PRO OXT HXT sing N N 544 SER N CA sing N N 545 SER N H sing N N 546 SER N H2 sing N N 547 SER CA C sing N N 548 SER CA CB sing N N 549 SER CA HA sing N N 550 SER C O doub N N 551 SER C OXT sing N N 552 SER CB OG sing N N 553 SER CB HB2 sing N N 554 SER CB HB3 sing N N 555 SER OG HG sing N N 556 SER OXT HXT sing N N 557 THR N CA sing N N 558 THR N H sing N N 559 THR N H2 sing N N 560 THR CA C sing N N 561 THR CA CB sing N N 562 THR CA HA sing N N 563 THR C O doub N N 564 THR C OXT sing N N 565 THR CB OG1 sing N N 566 THR CB CG2 sing N N 567 THR CB HB sing N N 568 THR OG1 HG1 sing N N 569 THR CG2 HG21 sing N N 570 THR CG2 HG22 sing N N 571 THR CG2 HG23 sing N N 572 THR OXT HXT sing N N 573 TRP N CA sing N N 574 TRP N H sing N N 575 TRP N H2 sing N N 576 TRP CA C sing N N 577 TRP CA CB sing N N 578 TRP CA HA sing N N 579 TRP C O doub N N 580 TRP C OXT sing N N 581 TRP CB CG sing N N 582 TRP CB HB2 sing N N 583 TRP CB HB3 sing N N 584 TRP CG CD1 doub Y N 585 TRP CG CD2 sing Y N 586 TRP CD1 NE1 sing Y N 587 TRP CD1 HD1 sing N N 588 TRP CD2 CE2 doub Y N 589 TRP CD2 CE3 sing Y N 590 TRP NE1 CE2 sing Y N 591 TRP NE1 HE1 sing N N 592 TRP CE2 CZ2 sing Y N 593 TRP CE3 CZ3 doub Y N 594 TRP CE3 HE3 sing N N 595 TRP CZ2 CH2 doub Y N 596 TRP CZ2 HZ2 sing N N 597 TRP CZ3 CH2 sing Y N 598 TRP CZ3 HZ3 sing N N 599 TRP CH2 HH2 sing N N 600 TRP OXT HXT sing N N 601 TYR N CA sing N N 602 TYR N H sing N N 603 TYR N H2 sing N N 604 TYR CA C sing N N 605 TYR CA CB sing N N 606 TYR CA HA sing N N 607 TYR C O doub N N 608 TYR C OXT sing N N 609 TYR CB CG sing N N 610 TYR CB HB2 sing N N 611 TYR CB HB3 sing N N 612 TYR CG CD1 doub Y N 613 TYR CG CD2 sing Y N 614 TYR CD1 CE1 sing Y N 615 TYR CD1 HD1 sing N N 616 TYR CD2 CE2 doub Y N 617 TYR CD2 HD2 sing N N 618 TYR CE1 CZ doub Y N 619 TYR CE1 HE1 sing N N 620 TYR CE2 CZ sing Y N 621 TYR CE2 HE2 sing N N 622 TYR CZ OH sing N N 623 TYR OH HH sing N N 624 TYR OXT HXT sing N N 625 VAL N CA sing N N 626 VAL N H sing N N 627 VAL N H2 sing N N 628 VAL CA C sing N N 629 VAL CA CB sing N N 630 VAL CA HA sing N N 631 VAL C O doub N N 632 VAL C OXT sing N N 633 VAL CB CG1 sing N N 634 VAL CB CG2 sing N N 635 VAL CB HB sing N N 636 VAL CG1 HG11 sing N N 637 VAL CG1 HG12 sing N N 638 VAL CG1 HG13 sing N N 639 VAL CG2 HG21 sing N N 640 VAL CG2 HG22 sing N N 641 VAL CG2 HG23 sing N N 642 VAL OXT HXT sing N N 643 # _ndb_struct_conf_na.entry_id 5EW1 _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 2 1_555 C DA 26 1_555 -0.767 -0.012 0.433 -18.975 -15.973 -10.325 1 D_DT2:DA26_D D 2 ? D 26 ? 20 1 1 C DC 3 1_555 C DG 25 1_555 0.386 0.251 0.364 -4.086 -6.932 3.336 2 D_DC3:DG25_D D 3 ? D 25 ? 19 1 1 C DC 4 1_555 C DG 23 1_555 0.571 0.094 -0.383 11.549 3.497 7.032 3 D_DC4:DG23_D D 4 ? D 23 ? 19 1 1 C DG 11 1_555 C DG 17 1_555 -1.230 -3.614 0.572 -22.368 -2.113 89.452 4 D_DG11:DG17_D D 11 ? D 17 ? 6 3 1 C DG 12 1_555 C DG 7 1_555 4.956 0.175 -0.679 -4.050 -7.376 -117.840 5 D_DG12:DG7_D D 12 ? D 7 ? 7 4 1 C DG 5 1_555 C DG 16 1_555 5.990 -1.000 0.049 -13.633 -6.654 -104.232 6 D_DG5:DG16_D D 5 ? D 16 ? 7 4 1 C DT 6 1_555 C DA 15 1_555 3.908 -1.525 0.166 -10.440 -4.261 -98.699 7 D_DT6:DA15_D D 6 ? D 15 ? 24 4 1 C DA 10 1_555 C DT 19 1_555 0.006 1.176 -0.469 -12.884 -24.174 172.483 8 D_DA10:DT19_D D 10 ? D 19 ? 21 2 1 D DG 10 1_555 D DG 15 1_555 1.540 3.688 0.341 -9.633 1.773 -90.240 9 E_DG10:DG15_E E 10 ? E 15 ? 6 3 1 D DG 11 1_555 D DG 14 1_555 -1.502 -3.462 -0.106 5.567 9.822 90.655 10 E_DG11:DG14_E E 11 ? E 14 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 2 1_555 C DA 26 1_555 C DC 3 1_555 C DG 25 1_555 1.253 -0.106 3.097 1.571 -5.127 44.936 0.298 -1.495 3.130 -6.679 -2.046 45.239 1 DD_DT2DC3:DG25DA26_DD D 2 ? D 26 ? D 3 ? D 25 ? 1 C DC 3 1_555 C DG 25 1_555 C DC 4 1_555 C DG 23 1_555 -0.680 -0.712 2.876 4.808 3.771 23.012 -2.770 2.978 2.536 9.244 -11.786 23.799 2 DD_DC3DC4:DG23DG25_DD D 3 ? D 25 ? D 4 ? D 23 ? 1 C DG 11 1_555 C DG 17 1_555 C DG 12 1_555 C DG 7 1_555 3.036 -1.327 3.008 -10.258 161.509 -118.737 -0.198 1.468 3.363 -82.003 -5.208 -170.773 3 DD_DG11DG12:DG7DG17_DD D 11 ? D 17 ? D 12 ? D 7 ? 1 C DG 12 1_555 C DG 7 1_555 C DG 5 1_555 C DG 16 1_555 -5.442 -1.348 0.627 -22.544 -11.622 -154.652 0.696 -2.797 0.357 5.951 -11.544 -155.280 4 DD_DG12DG5:DG16DG7_DD D 12 ? D 7 ? D 5 ? D 16 ? 1 C DG 5 1_555 C DG 16 1_555 C DT 6 1_555 C DA 15 1_555 -0.838 0.718 3.242 -7.816 -1.464 16.463 3.113 -1.907 3.223 -4.768 25.452 18.271 5 DD_DG5DT6:DA15DG16_DD D 5 ? D 16 ? D 6 ? D 15 ? 1 D DG 10 1_555 D DG 15 1_555 D DG 11 1_555 D DG 14 1_555 0.992 3.706 0.650 -88.383 143.221 -161.043 -1.883 0.477 0.210 -71.678 -44.233 -178.076 6 EE_DG10DG11:DG14DG15_EE E 10 ? E 15 ? E 11 ? E 14 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4I7Y _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5EW1 _atom_sites.fract_transf_matrix[1][1] 0.006871 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006871 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006871 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O P S # loop_