HEADER TRANSFERASE/TRANSFERASE INHIBITOR 22-NOV-15 5EWY TITLE SCABIN TOXIN FROM STREPTOMYCES SCABIES IN COMPLEX WITH INHIBITOR P6E COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ADP-RIBOSYLTRANSFERASE SCABIN; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.2.31; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SCABIEI 87.22; SOURCE 3 ORGANISM_TAXID: 680198; SOURCE 4 STRAIN: 87.22; SOURCE 5 GENE: SCAB_27771; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, INHIBITOR, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.RAVULAPALLI,B.LYONS,A.R.MERRILL REVDAT 4 22-NOV-17 5EWY 1 JRNL REMARK REVDAT 3 08-JUN-16 5EWY 1 JRNL REVDAT 2 06-APR-16 5EWY 1 JRNL REVDAT 1 23-MAR-16 5EWY 0 JRNL AUTH B.LYONS,R.RAVULAPALLI,J.LANOUE,M.R.LUGO,D.DUTTA,S.CARLIN, JRNL AUTH 2 A.R.MERRILL JRNL TITL SCABIN, A NOVEL DNA-ACTING ADP-RIBOSYLTRANSFERASE FROM JRNL TITL 2 STREPTOMYCES SCABIES. JRNL REF J.BIOL.CHEM. V. 291 11198 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27002155 JRNL DOI 10.1074/JBC.M115.707653 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 38050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9094 - 3.3737 0.99 2642 140 0.1366 0.1273 REMARK 3 2 3.3737 - 2.6780 0.99 2598 136 0.1432 0.1719 REMARK 3 3 2.6780 - 2.3395 0.99 2597 137 0.1459 0.1588 REMARK 3 4 2.3395 - 2.1256 1.00 2596 137 0.1476 0.1700 REMARK 3 5 2.1256 - 1.9732 1.00 2579 135 0.1477 0.2102 REMARK 3 6 1.9732 - 1.8569 1.00 2617 138 0.1458 0.1449 REMARK 3 7 1.8569 - 1.7639 1.00 2556 135 0.1543 0.1770 REMARK 3 8 1.7639 - 1.6871 1.00 2593 136 0.1646 0.1781 REMARK 3 9 1.6871 - 1.6222 1.00 2568 135 0.1764 0.2111 REMARK 3 10 1.6222 - 1.5662 1.00 2583 136 0.1873 0.2177 REMARK 3 11 1.5662 - 1.5172 1.00 2521 133 0.2093 0.2166 REMARK 3 12 1.5172 - 1.4738 1.00 2583 136 0.2255 0.2527 REMARK 3 13 1.4738 - 1.4350 0.99 2603 137 0.2624 0.2691 REMARK 3 14 1.4350 - 1.4000 0.98 2511 132 0.3324 0.3052 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1397 REMARK 3 ANGLE : 1.014 1918 REMARK 3 CHIRALITY : 0.079 195 REMARK 3 PLANARITY : 0.007 252 REMARK 3 DIHEDRAL : 17.226 510 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.7040 38.4251 2.5186 REMARK 3 T TENSOR REMARK 3 T11: 0.4640 T22: 0.5690 REMARK 3 T33: 0.3820 T12: 0.0554 REMARK 3 T13: 0.0920 T23: 0.0510 REMARK 3 L TENSOR REMARK 3 L11: 2.2773 L22: 3.2710 REMARK 3 L33: 2.2112 L12: 2.5081 REMARK 3 L13: 2.0009 L23: 1.7183 REMARK 3 S TENSOR REMARK 3 S11: 0.6774 S12: 0.5539 S13: 0.3316 REMARK 3 S21: 0.1376 S22: -0.1830 S23: -0.4020 REMARK 3 S31: -0.3343 S32: 0.3430 S33: -0.1425 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2836 33.9574 8.7965 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.3352 REMARK 3 T33: 0.1840 T12: -0.0026 REMARK 3 T13: -0.0336 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 2.4924 L22: 1.6749 REMARK 3 L33: 1.5347 L12: -0.6403 REMARK 3 L13: -0.5238 L23: 0.2358 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: 0.6366 S13: 0.1511 REMARK 3 S21: -0.2617 S22: 0.0019 S23: 0.2276 REMARK 3 S31: -0.0457 S32: -0.5048 S33: -0.0268 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0950 36.9922 15.3953 REMARK 3 T TENSOR REMARK 3 T11: 0.1745 T22: 0.3040 REMARK 3 T33: 0.2445 T12: 0.0175 REMARK 3 T13: 0.0083 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 4.5579 L22: 4.2626 REMARK 3 L33: 2.1854 L12: -2.5978 REMARK 3 L13: -0.3472 L23: 0.3164 REMARK 3 S TENSOR REMARK 3 S11: -0.1754 S12: 0.3006 S13: 0.0078 REMARK 3 S21: 0.0807 S22: 0.0872 S23: 0.6273 REMARK 3 S31: -0.1234 S32: -0.5986 S33: 0.1259 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4448 33.5229 23.6489 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1571 REMARK 3 T33: 0.1491 T12: 0.0031 REMARK 3 T13: -0.0146 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 2.1861 L22: 5.3088 REMARK 3 L33: 5.3034 L12: -0.8201 REMARK 3 L13: 0.0817 L23: -2.8732 REMARK 3 S TENSOR REMARK 3 S11: -0.1123 S12: -0.1371 S13: 0.0276 REMARK 3 S21: 0.1633 S22: 0.1103 S23: -0.0331 REMARK 3 S31: 0.1349 S32: -0.1919 S33: 0.0337 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5479 30.0385 18.6916 REMARK 3 T TENSOR REMARK 3 T11: 0.1698 T22: 0.1591 REMARK 3 T33: 0.1261 T12: -0.0286 REMARK 3 T13: -0.0047 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 3.6635 L22: 4.1999 REMARK 3 L33: 1.4586 L12: -0.3336 REMARK 3 L13: -0.9947 L23: -0.8951 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: -0.0444 S13: -0.0395 REMARK 3 S21: 0.3091 S22: 0.0370 S23: 0.2215 REMARK 3 S31: -0.0389 S32: -0.1597 S33: 0.0109 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7187 47.5790 20.6328 REMARK 3 T TENSOR REMARK 3 T11: 0.3966 T22: 0.1938 REMARK 3 T33: 0.3338 T12: 0.0726 REMARK 3 T13: 0.0524 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 2.8585 L22: 4.9424 REMARK 3 L33: 2.3873 L12: -0.9304 REMARK 3 L13: -0.4273 L23: -2.7683 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: -0.2134 S13: 0.5712 REMARK 3 S21: 0.8177 S22: 0.1061 S23: 0.2655 REMARK 3 S31: -1.1971 S32: -0.1897 S33: -0.2060 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8977 31.8191 13.4693 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 0.1721 REMARK 3 T33: 0.1145 T12: -0.0275 REMARK 3 T13: 0.0094 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 3.0046 L22: 4.7513 REMARK 3 L33: 1.0733 L12: -1.2292 REMARK 3 L13: -0.8013 L23: -0.3015 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.3005 S13: 0.0100 REMARK 3 S21: -0.0503 S22: 0.0128 S23: 0.1788 REMARK 3 S31: 0.0574 S32: -0.2470 S33: -0.0154 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4284 22.7010 18.0099 REMARK 3 T TENSOR REMARK 3 T11: 0.1613 T22: 0.1201 REMARK 3 T33: 0.1640 T12: -0.0169 REMARK 3 T13: 0.0342 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.2149 L22: 2.7514 REMARK 3 L33: 5.2255 L12: -0.0687 REMARK 3 L13: 0.6073 L23: -0.7012 REMARK 3 S TENSOR REMARK 3 S11: -0.0904 S12: -0.0388 S13: -0.1912 REMARK 3 S21: 0.0868 S22: -0.0030 S23: 0.0389 REMARK 3 S31: 0.3970 S32: -0.4477 S33: 0.0877 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38076 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 49.456 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.02900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.5, 15% W/V PEG400, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.58500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.26500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.58500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.26500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 VAL A 8 REMARK 465 VAL A 9 REMARK 465 LEU A 10 REMARK 465 SER A 11 REMARK 465 LEU A 12 REMARK 465 SER A 13 REMARK 465 ALA A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 SER A 19 REMARK 465 ALA A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 ALA A 23 REMARK 465 PRO A 24 REMARK 465 ALA A 25 REMARK 465 GLN A 26 REMARK 465 THR A 27 REMARK 465 PRO A 28 REMARK 465 THR A 29 REMARK 465 ALA A 30 REMARK 465 THR A 31 REMARK 465 ALA A 32 REMARK 465 THR A 33 REMARK 465 SER A 34 REMARK 465 ALA A 35 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 130 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 540 O HOH A 581 1.94 REMARK 500 O HOH A 555 O HOH A 561 1.98 REMARK 500 O HOH A 562 O HOH A 572 1.98 REMARK 500 O HOH A 560 O HOH A 572 2.01 REMARK 500 O HOH A 534 O HOH A 542 2.03 REMARK 500 O HOH A 490 O HOH A 541 2.08 REMARK 500 O HOH A 435 O HOH A 520 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 429 O HOH A 546 2656 2.05 REMARK 500 O HOH A 440 O HOH A 535 2656 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 64 -175.11 -69.12 REMARK 500 CYS A 72 35.09 -147.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 584 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 585 DISTANCE = 6.56 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5TQ A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EWK RELATED DB: PDB DBREF 5EWY A 1 200 UNP C9Z6T8 C9Z6T8_STRSW 1 200 SEQRES 1 A 200 MET ARG ARG ARG ALA ALA ALA VAL VAL LEU SER LEU SER SEQRES 2 A 200 ALA VAL LEU ALA THR SER ALA ALA THR ALA PRO ALA GLN SEQRES 3 A 200 THR PRO THR ALA THR ALA THR SER ALA LYS ALA ALA ALA SEQRES 4 A 200 PRO ALA CYS PRO ARG PHE ASP ASP PRO VAL HIS ALA ALA SEQRES 5 A 200 ALA ASP PRO ARG VAL ASP VAL GLU ARG ILE THR PRO ASP SEQRES 6 A 200 PRO VAL TRP ARG THR THR CYS GLY THR LEU TYR ARG SER SEQRES 7 A 200 ASP SER ARG GLY PRO ALA VAL VAL PHE GLU GLN GLY PHE SEQRES 8 A 200 LEU PRO LYS ASP VAL ILE ASP GLY GLN TYR ASP ILE GLU SEQRES 9 A 200 SER TYR VAL LEU VAL ASN GLN PRO SER PRO TYR VAL SER SEQRES 10 A 200 THR THR TYR ASP HIS ASP LEU TYR LYS THR TRP TYR LYS SEQRES 11 A 200 SER GLY TYR ASN TYR TYR ILE ASP ALA PRO GLY GLY VAL SEQRES 12 A 200 ASP VAL ASN LYS THR ILE GLY ASP ARG HIS LYS TRP ALA SEQRES 13 A 200 ASP GLN VAL GLU VAL ALA PHE PRO GLY GLY ILE ARG THR SEQRES 14 A 200 GLU PHE VAL ILE GLY VAL CYS PRO VAL ASP LYS LYS THR SEQRES 15 A 200 ARG THR GLU LYS MET SER GLU CYS VAL GLY ASN PRO HIS SEQRES 16 A 200 TYR GLU PRO TRP HIS HET 5TQ A 301 34 HETNAM 5TQ 4-(8-FLUORANYL-6-OXIDANYLIDENE-1,3,4,5- HETNAM 2 5TQ TETRAHYDROBENZO[C][1,6]NAPHTHYRIDIN-2-YL)BUTANOIC ACID FORMUL 2 5TQ C16 H17 F N2 O3 FORMUL 3 HOH *185(H2 O) HELIX 1 AA1 ASP A 58 ILE A 62 5 5 HELIX 2 AA2 GLY A 82 GLY A 90 1 9 HELIX 3 AA3 ASP A 102 VAL A 109 1 8 HELIX 4 AA4 ASP A 123 TRP A 128 5 6 HELIX 5 AA5 VAL A 145 GLY A 150 1 6 HELIX 6 AA6 TRP A 155 GLN A 158 5 4 HELIX 7 AA7 ARG A 168 GLU A 170 5 3 HELIX 8 AA8 MET A 187 CYS A 190 5 4 SHEET 1 AA1 4 LEU A 75 ASP A 79 0 SHEET 2 AA1 4 TYR A 133 ILE A 137 -1 O TYR A 135 N ARG A 77 SHEET 3 AA1 4 VAL A 172 ASP A 179 -1 O CYS A 176 N ASN A 134 SHEET 4 AA1 4 THR A 184 GLU A 185 -1 O THR A 184 N ASP A 179 SHEET 1 AA2 4 LEU A 75 ASP A 79 0 SHEET 2 AA2 4 TYR A 133 ILE A 137 -1 O TYR A 135 N ARG A 77 SHEET 3 AA2 4 VAL A 172 ASP A 179 -1 O CYS A 176 N ASN A 134 SHEET 4 AA2 4 VAL A 191 GLY A 192 -1 O VAL A 191 N VAL A 175 SHEET 1 AA3 3 TYR A 115 THR A 119 0 SHEET 2 AA3 3 GLU A 160 PRO A 164 -1 O PHE A 163 N VAL A 116 SHEET 3 AA3 3 VAL A 143 ASP A 144 -1 N VAL A 143 O ALA A 162 SSBOND 1 CYS A 42 CYS A 72 1555 1555 2.06 SSBOND 2 CYS A 176 CYS A 190 1555 1555 2.04 CISPEP 1 THR A 63 PRO A 64 0 -13.29 SITE 1 AC1 12 ARG A 77 SER A 78 LYS A 94 SER A 117 SITE 2 AC1 12 THR A 118 LEU A 124 TRP A 128 GLN A 158 SITE 3 AC1 12 GLU A 160 HOH A 449 HOH A 461 HOH A 494 CRYST1 87.170 60.530 37.940 90.00 100.25 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011472 0.000000 0.002075 0.00000 SCALE2 0.000000 0.016521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026785 0.00000