HEADER ISOMERASE 23-NOV-15 5EX2 TITLE CRYSTAL STRUCTURE OF CYCLOPHILIN AQUACYP293 FROM HIRSCHIA BALTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.2.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HIRSCHIA BALTICA; SOURCE 3 ORGANISM_TAXID: 582402; SOURCE 4 STRAIN: ATCC 49814 / DSM 5838 / IFAM 1418; SOURCE 5 GENE: HBAL_1421; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PNIC28A KEYWDS CYCLOPHILIN, PPIASE, ROTAMASE, FOLDING HELPER, PERIPLASMIC, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.P.JAKOB,T.MAIER REVDAT 2 10-JAN-24 5EX2 1 LINK REVDAT 1 22-JUN-16 5EX2 0 JRNL AUTH R.P.JAKOB,P.A.SCHMIDPETER,J.R.KOCH,F.X.SCHMID,T.MAIER JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A NOVEL FAMILY JRNL TITL 2 OF CYCLOPHILINS, THE AQUACYPS. JRNL REF PLOS ONE V. 11 57070 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27276069 JRNL DOI 10.1371/JOURNAL.PONE.0157070 REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 122350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9072 - 3.3913 0.97 6785 131 0.1485 0.1783 REMARK 3 2 3.3913 - 2.6918 0.96 6630 126 0.1526 0.1587 REMARK 3 3 2.6918 - 2.3516 0.98 6717 163 0.1540 0.1719 REMARK 3 4 2.3516 - 2.1366 0.98 6741 133 0.1536 0.2058 REMARK 3 5 2.1366 - 1.9834 0.96 6606 141 0.1515 0.1926 REMARK 3 6 1.9834 - 1.8665 0.97 6632 141 0.1599 0.1793 REMARK 3 7 1.8665 - 1.7730 0.99 6751 145 0.1592 0.2020 REMARK 3 8 1.7730 - 1.6958 0.99 6807 139 0.1614 0.1941 REMARK 3 9 1.6958 - 1.6305 0.98 6703 144 0.1640 0.1981 REMARK 3 10 1.6305 - 1.5743 0.99 6759 141 0.1649 0.1662 REMARK 3 11 1.5743 - 1.5250 0.99 6749 127 0.1836 0.2347 REMARK 3 12 1.5250 - 1.4814 0.98 6698 143 0.1909 0.2056 REMARK 3 13 1.4814 - 1.4424 0.99 6789 139 0.2101 0.2334 REMARK 3 14 1.4424 - 1.4072 0.98 6702 129 0.2293 0.2546 REMARK 3 15 1.4072 - 1.3752 0.98 6698 146 0.2494 0.2497 REMARK 3 16 1.3752 - 1.3460 0.98 6675 148 0.2746 0.3041 REMARK 3 17 1.3460 - 1.3190 0.99 6755 128 0.2819 0.2849 REMARK 3 18 1.3190 - 1.2942 0.83 5692 97 0.3387 0.3525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4418 REMARK 3 ANGLE : 1.219 6000 REMARK 3 CHIRALITY : 0.048 647 REMARK 3 PLANARITY : 0.006 801 REMARK 3 DIHEDRAL : 12.218 1680 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7191 17.8729 42.9430 REMARK 3 T TENSOR REMARK 3 T11: 0.0957 T22: 0.1056 REMARK 3 T33: 0.1328 T12: -0.0115 REMARK 3 T13: 0.0008 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.6714 L22: 1.7709 REMARK 3 L33: 0.6574 L12: -1.4235 REMARK 3 L13: 0.5093 L23: -0.3687 REMARK 3 S TENSOR REMARK 3 S11: -0.0076 S12: 0.0743 S13: 0.1624 REMARK 3 S21: -0.0237 S22: -0.0264 S23: -0.1605 REMARK 3 S31: -0.0729 S32: 0.0326 S33: 0.0680 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9873 -0.5086 48.9736 REMARK 3 T TENSOR REMARK 3 T11: 0.0705 T22: 0.0745 REMARK 3 T33: 0.0811 T12: -0.0058 REMARK 3 T13: 0.0116 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.8625 L22: 0.7763 REMARK 3 L33: 1.0442 L12: -0.2348 REMARK 3 L13: 0.3388 L23: 0.1361 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: -0.0427 S13: -0.0246 REMARK 3 S21: 0.0641 S22: -0.0011 S23: 0.0157 REMARK 3 S31: 0.0157 S32: -0.0359 S33: -0.0205 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9126 2.3268 50.2229 REMARK 3 T TENSOR REMARK 3 T11: 0.0941 T22: 0.0781 REMARK 3 T33: 0.0968 T12: -0.0168 REMARK 3 T13: 0.0041 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.0055 L22: 0.5874 REMARK 3 L33: 0.3421 L12: -0.8552 REMARK 3 L13: -0.2567 L23: 0.0408 REMARK 3 S TENSOR REMARK 3 S11: -0.0614 S12: -0.0883 S13: 0.0085 REMARK 3 S21: 0.0476 S22: 0.0410 S23: 0.0592 REMARK 3 S31: 0.0203 S32: -0.0531 S33: 0.0101 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7633 -2.0411 45.0559 REMARK 3 T TENSOR REMARK 3 T11: 0.0773 T22: 0.0570 REMARK 3 T33: 0.0927 T12: -0.0016 REMARK 3 T13: 0.0158 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.5476 L22: 0.4190 REMARK 3 L33: 0.5972 L12: -0.1877 REMARK 3 L13: 0.2720 L23: 0.1486 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: -0.0026 S13: -0.1340 REMARK 3 S21: 0.0300 S22: 0.0119 S23: 0.0461 REMARK 3 S31: 0.0246 S32: 0.0052 S33: 0.0084 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0877 15.1777 37.8512 REMARK 3 T TENSOR REMARK 3 T11: 0.0772 T22: 0.0651 REMARK 3 T33: 0.0956 T12: 0.0048 REMARK 3 T13: 0.0115 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.2339 L22: 1.1896 REMARK 3 L33: 1.3681 L12: -0.7540 REMARK 3 L13: 0.6012 L23: -0.2635 REMARK 3 S TENSOR REMARK 3 S11: 0.0328 S12: 0.1822 S13: -0.1590 REMARK 3 S21: -0.0564 S22: -0.0225 S23: 0.0146 REMARK 3 S31: -0.0100 S32: 0.0836 S33: -0.0070 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8740 -22.1157 78.2078 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1213 REMARK 3 T33: 0.1623 T12: -0.0223 REMARK 3 T13: 0.0214 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.4716 L22: 3.6890 REMARK 3 L33: 3.8163 L12: 0.2543 REMARK 3 L13: 0.2330 L23: 1.2983 REMARK 3 S TENSOR REMARK 3 S11: -0.1696 S12: 0.1952 S13: -0.3518 REMARK 3 S21: -0.1855 S22: 0.0223 S23: 0.1994 REMARK 3 S31: 0.2305 S32: -0.1942 S33: 0.1409 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8526 2.6253 88.0184 REMARK 3 T TENSOR REMARK 3 T11: 0.0804 T22: 0.0730 REMARK 3 T33: 0.0838 T12: 0.0058 REMARK 3 T13: 0.0201 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.5765 L22: 0.5596 REMARK 3 L33: 0.6855 L12: -0.1337 REMARK 3 L13: 0.1681 L23: -0.1413 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: -0.0879 S13: 0.1085 REMARK 3 S21: 0.0378 S22: -0.0001 S23: 0.0247 REMARK 3 S31: -0.0409 S32: -0.0202 S33: -0.0014 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8801 -6.2523 85.2645 REMARK 3 T TENSOR REMARK 3 T11: 0.0878 T22: 0.0805 REMARK 3 T33: 0.1258 T12: 0.0052 REMARK 3 T13: 0.0207 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.8278 L22: 1.0518 REMARK 3 L33: 0.9177 L12: 0.3130 REMARK 3 L13: 1.2275 L23: 0.5826 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.0252 S13: -0.1748 REMARK 3 S21: -0.0074 S22: 0.0231 S23: -0.0737 REMARK 3 S31: 0.0647 S32: 0.1053 S33: -0.0087 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 146 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6011 2.8799 82.1540 REMARK 3 T TENSOR REMARK 3 T11: 0.0863 T22: 0.0691 REMARK 3 T33: 0.0982 T12: 0.0044 REMARK 3 T13: 0.0110 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.1355 L22: 0.6503 REMARK 3 L33: 0.5595 L12: -0.0356 REMARK 3 L13: -0.0892 L23: -0.1532 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: 0.0178 S13: 0.0750 REMARK 3 S21: -0.0043 S22: 0.0297 S23: 0.0044 REMARK 3 S31: -0.0302 S32: -0.0361 S33: -0.0167 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 225 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0268 -14.5357 75.2794 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.0885 REMARK 3 T33: 0.1152 T12: 0.0041 REMARK 3 T13: 0.0071 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.4219 L22: 1.2327 REMARK 3 L33: 0.8526 L12: -0.2359 REMARK 3 L13: -0.4203 L23: -0.0093 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: 0.1416 S13: -0.0940 REMARK 3 S21: -0.0868 S22: 0.0066 S23: -0.0578 REMARK 3 S31: 0.0298 S32: -0.0568 S33: 0.0252 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EX2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122350 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.294 REMARK 200 RESOLUTION RANGE LOW (A) : 47.874 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 1.14000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2CPL REMARK 200 REMARK 200 REMARK: PLATE LIKE, 100X100X20 REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG20000, 20 % PEGMME550 IN 0.03 REMARK 280 M CACL2, 0.03M MGCL2, 0.1 M MOPS/HEPES-NA PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.36500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 LYS A 267 REMARK 465 GLU A 268 REMARK 465 GLY A 269 REMARK 465 SER B -1 REMARK 465 MET B 0 REMARK 465 LYS B 267 REMARK 465 GLU B 268 REMARK 465 GLY B 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 227 O HOH B 401 2.05 REMARK 500 O HOH B 404 O HOH B 485 2.06 REMARK 500 O HOH A 690 O HOH A 784 2.14 REMARK 500 O HOH A 803 O HOH A 862 2.15 REMARK 500 O HOH B 683 O HOH B 952 2.16 REMARK 500 O HOH B 470 O HOH B 644 2.17 REMARK 500 O HOH B 497 O HOH B 718 2.17 REMARK 500 O HOH B 427 O HOH B 888 2.17 REMARK 500 O ASP B 248 O HOH B 402 2.18 REMARK 500 O HOH A 416 O HOH A 795 2.18 REMARK 500 O HOH B 578 O HOH B 761 2.18 REMARK 500 O HOH B 522 O HOH B 532 2.18 REMARK 500 O HOH A 673 O HOH A 715 2.18 REMARK 500 O HOH A 401 O HOH A 755 2.19 REMARK 500 O HOH A 752 O HOH A 911 2.19 REMARK 500 OE1 GLU B 13 O HOH B 403 2.19 REMARK 500 O HOH B 402 O HOH B 777 2.19 REMARK 500 O HOH A 558 O HOH A 703 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 841 O HOH B 899 1655 2.10 REMARK 500 O HOH A 412 O HOH B 506 2557 2.13 REMARK 500 O HOH A 411 O HOH A 413 2646 2.16 REMARK 500 O HOH B 422 O HOH B 611 1455 2.17 REMARK 500 O HOH A 660 O HOH A 690 2646 2.17 REMARK 500 O HOH A 412 O HOH B 875 2557 2.17 REMARK 500 O HOH A 416 O HOH A 698 2556 2.18 REMARK 500 O HOH A 402 O HOH A 597 2556 2.18 REMARK 500 O HOH B 546 O HOH B 872 2647 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 70 -87.12 -138.78 REMARK 500 LYS A 166 -69.75 -151.26 REMARK 500 TRP A 186 -5.08 -142.97 REMARK 500 ALA B 38 78.26 -119.23 REMARK 500 PHE B 70 -86.15 -137.23 REMARK 500 LYS B 166 -69.48 -150.19 REMARK 500 TRP B 186 -4.99 -143.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 958 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH B 982 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 983 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 984 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B 985 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 986 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 987 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B 988 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH B 989 DISTANCE = 7.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 113 OE1 REMARK 620 2 GLN A 131 OE1 77.6 REMARK 620 3 GLU A 133 OE1 157.1 79.4 REMARK 620 4 GLU A 133 OE2 153.6 128.6 49.2 REMARK 620 5 HOH A 410 O 83.7 93.6 96.9 91.3 REMARK 620 6 HOH A 710 O 80.3 155.6 122.4 74.3 94.3 REMARK 620 7 HOH A 769 O 94.2 84.0 84.2 91.5 177.1 87.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 113 OE1 REMARK 620 2 GLN B 131 OE1 77.8 REMARK 620 3 GLU B 133 OE1 156.9 79.1 REMARK 620 4 GLU B 133 OE2 152.6 129.4 50.5 REMARK 620 5 HOH B 486 O 85.1 93.5 97.4 89.5 REMARK 620 6 HOH B 674 O 80.2 157.1 122.5 73.0 91.1 REMARK 620 7 HOH B 788 O 92.9 88.8 85.5 91.0 176.6 85.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 302 DBREF 5EX2 A 1 269 UNP C6XJ17 C6XJ17_HIRBI 25 293 DBREF 5EX2 B 1 269 UNP C6XJ17 C6XJ17_HIRBI 25 293 SEQADV 5EX2 SER A -1 UNP C6XJ17 EXPRESSION TAG SEQADV 5EX2 MET A 0 UNP C6XJ17 EXPRESSION TAG SEQADV 5EX2 SER B -1 UNP C6XJ17 EXPRESSION TAG SEQADV 5EX2 MET B 0 UNP C6XJ17 EXPRESSION TAG SEQRES 1 A 271 SER MET VAL GLU TYR THR LYS GLU SER VAL GLN ALA ASP SEQRES 2 A 271 PRO GLU ASN TRP ARG SER VAL ASP PRO ASP ASN LEU VAL SEQRES 3 A 271 ILE PHE GLU THR THR LYS GLY VAL VAL TYR ILE GLU LEU SEQRES 4 A 271 ALA PRO GLU ILE ALA PRO ASN HIS VAL ALA GLN ILE ARG SEQRES 5 A 271 LYS VAL VAL ARG THR GLY LEU TYR SER GLY THR LYS PHE SEQRES 6 A 271 HIS ARG VAL ILE SER GLY PHE MET ALA GLN GLY GLY ASP SEQRES 7 A 271 ILE ALA ALA THR LEU GLY ARG GLU PRO ASP LEU GLU ALA SEQRES 8 A 271 VAL ASP GLY GLU PHE VAL PHE ARG ARG ASP PRO LYS SER SEQRES 9 A 271 ILE VAL LEU THR VAL ILE ASN GLU GLU ASP GLN THR LYS SEQRES 10 A 271 SER GLN TYR THR GLY PHE TYR ASN GLY PHE PRO ILE GLU SEQRES 11 A 271 THR ARG GLN ASP GLU LEU ALA ASN TYR SER GLU ASP LYS SEQRES 12 A 271 ARG VAL GLU SER TRP MET PRO HIS CYS ALA GLY VAL VAL SEQRES 13 A 271 SER MET ALA ARG THR ASN ASP PRO ASN SER GLY LYS ASP SEQRES 14 A 271 GLN PHE PHE LEU MET ARG ASP GLU SER ARG PHE LEU ASP SEQRES 15 A 271 ARG LYS TYR SER SER TRP GLY ARG MET LEU GLU GLY LEU SEQRES 16 A 271 ASP VAL ALA LYS SER LEU THR ILE GLY GLU PRO PRO GLU SEQRES 17 A 271 ARG PRO ASP ILE LEU VAL SER ALA VAL MET VAL SER ASP SEQRES 18 A 271 LEU ALA PRO LYS ASP ARG PRO GLU ALA TRP VAL MET ARG SEQRES 19 A 271 ASN ASP GLY PRO MET PHE SER LEU PHE LEU ASP ARG MET SEQRES 20 A 271 GLY ARG ASP LYS ASP VAL CYS SER LEU PRO GLN THR PRO SEQRES 21 A 271 SER VAL VAL PHE VAL SER GLU ASP LYS GLU GLY SEQRES 1 B 271 SER MET VAL GLU TYR THR LYS GLU SER VAL GLN ALA ASP SEQRES 2 B 271 PRO GLU ASN TRP ARG SER VAL ASP PRO ASP ASN LEU VAL SEQRES 3 B 271 ILE PHE GLU THR THR LYS GLY VAL VAL TYR ILE GLU LEU SEQRES 4 B 271 ALA PRO GLU ILE ALA PRO ASN HIS VAL ALA GLN ILE ARG SEQRES 5 B 271 LYS VAL VAL ARG THR GLY LEU TYR SER GLY THR LYS PHE SEQRES 6 B 271 HIS ARG VAL ILE SER GLY PHE MET ALA GLN GLY GLY ASP SEQRES 7 B 271 ILE ALA ALA THR LEU GLY ARG GLU PRO ASP LEU GLU ALA SEQRES 8 B 271 VAL ASP GLY GLU PHE VAL PHE ARG ARG ASP PRO LYS SER SEQRES 9 B 271 ILE VAL LEU THR VAL ILE ASN GLU GLU ASP GLN THR LYS SEQRES 10 B 271 SER GLN TYR THR GLY PHE TYR ASN GLY PHE PRO ILE GLU SEQRES 11 B 271 THR ARG GLN ASP GLU LEU ALA ASN TYR SER GLU ASP LYS SEQRES 12 B 271 ARG VAL GLU SER TRP MET PRO HIS CYS ALA GLY VAL VAL SEQRES 13 B 271 SER MET ALA ARG THR ASN ASP PRO ASN SER GLY LYS ASP SEQRES 14 B 271 GLN PHE PHE LEU MET ARG ASP GLU SER ARG PHE LEU ASP SEQRES 15 B 271 ARG LYS TYR SER SER TRP GLY ARG MET LEU GLU GLY LEU SEQRES 16 B 271 ASP VAL ALA LYS SER LEU THR ILE GLY GLU PRO PRO GLU SEQRES 17 B 271 ARG PRO ASP ILE LEU VAL SER ALA VAL MET VAL SER ASP SEQRES 18 B 271 LEU ALA PRO LYS ASP ARG PRO GLU ALA TRP VAL MET ARG SEQRES 19 B 271 ASN ASP GLY PRO MET PHE SER LEU PHE LEU ASP ARG MET SEQRES 20 B 271 GLY ARG ASP LYS ASP VAL CYS SER LEU PRO GLN THR PRO SEQRES 21 B 271 SER VAL VAL PHE VAL SER GLU ASP LYS GLU GLY HET MG A 301 1 HET MG A 302 1 HET CA B 301 1 HET CL B 302 1 HETNAM MG MAGNESIUM ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 3 MG 2(MG 2+) FORMUL 5 CA CA 2+ FORMUL 6 CL CL 1- FORMUL 7 HOH *1147(H2 O) HELIX 1 AA1 THR A 4 ALA A 10 1 7 HELIX 2 AA2 ASP A 19 ASP A 21 5 3 HELIX 3 AA3 ALA A 42 THR A 55 1 14 HELIX 4 AA4 ASP A 76 GLY A 82 1 7 HELIX 5 AA5 ASP A 132 TYR A 137 5 6 HELIX 6 AA6 SER A 176 ASP A 180 5 5 HELIX 7 AA7 GLY A 192 LYS A 197 1 6 HELIX 8 AA8 SER A 218 LEU A 220 5 3 HELIX 9 AA9 ALA A 221 ARG A 225 5 5 HELIX 10 AB1 GLY A 235 GLY A 246 1 12 HELIX 11 AB2 ASP A 250 LEU A 254 5 5 HELIX 12 AB3 THR B 4 ALA B 10 1 7 HELIX 13 AB4 ASP B 19 ASP B 21 5 3 HELIX 14 AB5 ALA B 42 THR B 55 1 14 HELIX 15 AB6 ASP B 76 GLY B 82 1 7 HELIX 16 AB7 ASP B 132 TYR B 137 5 6 HELIX 17 AB8 SER B 176 ASP B 180 5 5 HELIX 18 AB9 GLY B 192 LYS B 197 1 6 HELIX 19 AC1 SER B 218 LEU B 220 5 3 HELIX 20 AC2 ALA B 221 ARG B 225 5 5 HELIX 21 AC3 GLY B 235 GLY B 246 1 12 HELIX 22 AC4 ASP B 250 LEU B 254 5 5 SHEET 1 AA1 3 TRP A 15 SER A 17 0 SHEET 2 AA1 3 GLU A 227 MET A 231 -1 O VAL A 230 N ARG A 16 SHEET 3 AA1 3 SER A 259 PHE A 262 -1 O PHE A 262 N GLU A 227 SHEET 1 AA2 9 THR A 61 LYS A 62 0 SHEET 2 AA2 9 ILE A 210 MET A 216 -1 O LEU A 211 N THR A 61 SHEET 3 AA2 9 LEU A 23 THR A 28 -1 N ILE A 25 O VAL A 215 SHEET 4 AA2 9 GLY A 31 LEU A 37 -1 O VAL A 33 N PHE A 26 SHEET 5 AA2 9 SER A 185 GLU A 191 -1 O ARG A 188 N GLU A 36 SHEET 6 AA2 9 VAL A 153 MET A 156 -1 N VAL A 154 O TRP A 186 SHEET 7 AA2 9 PHE A 169 MET A 172 -1 O MET A 172 N VAL A 153 SHEET 8 AA2 9 MET A 71 GLY A 74 -1 N ALA A 72 O LEU A 171 SHEET 9 AA2 9 ARG A 65 ILE A 67 -1 N ARG A 65 O GLN A 73 SHEET 1 AA3 5 PHE A 96 ARG A 98 0 SHEET 2 AA3 5 VAL A 143 TRP A 146 -1 O VAL A 143 N ARG A 98 SHEET 3 AA3 5 PHE A 125 ARG A 130 -1 N GLU A 128 O TRP A 146 SHEET 4 AA3 5 GLN A 117 TYR A 122 -1 N GLY A 120 O ILE A 127 SHEET 5 AA3 5 THR A 106 VAL A 107 -1 N THR A 106 O PHE A 121 SHEET 1 AA4 3 TRP B 15 SER B 17 0 SHEET 2 AA4 3 GLU B 227 MET B 231 -1 O VAL B 230 N ARG B 16 SHEET 3 AA4 3 SER B 259 PHE B 262 -1 O PHE B 262 N GLU B 227 SHEET 1 AA5 9 THR B 61 LYS B 62 0 SHEET 2 AA5 9 ILE B 210 MET B 216 -1 O LEU B 211 N THR B 61 SHEET 3 AA5 9 LEU B 23 THR B 28 -1 N ILE B 25 O VAL B 215 SHEET 4 AA5 9 GLY B 31 LEU B 37 -1 O VAL B 33 N PHE B 26 SHEET 5 AA5 9 SER B 185 GLU B 191 -1 O ARG B 188 N GLU B 36 SHEET 6 AA5 9 VAL B 153 MET B 156 -1 N VAL B 154 O TRP B 186 SHEET 7 AA5 9 PHE B 169 MET B 172 -1 O PHE B 170 N SER B 155 SHEET 8 AA5 9 MET B 71 GLY B 74 -1 N ALA B 72 O LEU B 171 SHEET 9 AA5 9 ARG B 65 ILE B 67 -1 N ARG B 65 O GLN B 73 SHEET 1 AA6 5 PHE B 96 ARG B 98 0 SHEET 2 AA6 5 VAL B 143 TRP B 146 -1 O VAL B 143 N ARG B 98 SHEET 3 AA6 5 PHE B 125 ARG B 130 -1 N GLU B 128 O TRP B 146 SHEET 4 AA6 5 GLN B 117 TYR B 122 -1 N GLY B 120 O ILE B 127 SHEET 5 AA6 5 THR B 106 VAL B 107 -1 N THR B 106 O PHE B 121 SSBOND 1 CYS A 150 CYS A 252 1555 1555 2.04 SSBOND 2 CYS B 150 CYS B 252 1555 1555 2.04 LINK OE1 GLN A 113 MG MG A 301 1555 1555 2.40 LINK OE1 GLN A 131 MG MG A 301 1555 1555 2.38 LINK OE1 GLU A 133 MG MG A 301 1555 1555 2.66 LINK OE2 GLU A 133 MG MG A 301 1555 1555 2.58 LINK MG MG A 301 O HOH A 410 1555 1555 2.46 LINK MG MG A 301 O HOH A 710 1555 1555 2.30 LINK MG MG A 301 O HOH A 769 1555 1555 2.33 LINK MG MG A 302 O HOH A 886 1555 1555 2.92 LINK OE1 GLN B 113 CA CA B 301 1555 1555 2.40 LINK OE1 GLN B 131 CA CA B 301 1555 1555 2.36 LINK OE1 GLU B 133 CA CA B 301 1555 1555 2.58 LINK OE2 GLU B 133 CA CA B 301 1555 1555 2.50 LINK CA CA B 301 O HOH B 486 1555 1555 2.33 LINK CA CA B 301 O HOH B 674 1555 1555 2.38 LINK CA CA B 301 O HOH B 788 1555 1555 2.35 CISPEP 1 GLU A 203 PRO A 204 0 0.01 CISPEP 2 GLU B 203 PRO B 204 0 0.31 SITE 1 AC1 6 GLN A 113 GLN A 131 GLU A 133 HOH A 410 SITE 2 AC1 6 HOH A 710 HOH A 769 SITE 1 AC2 3 GLY A 69 ARG A 173 HOH A 886 SITE 1 AC3 6 GLN B 113 GLN B 131 GLU B 133 HOH B 486 SITE 2 AC3 6 HOH B 674 HOH B 788 SITE 1 AC4 2 ARG B 83 ASP B 86 CRYST1 47.940 72.730 73.930 90.00 93.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020859 0.000000 0.001092 0.00000 SCALE2 0.000000 0.013749 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013545 0.00000