HEADER TRANSPORT PROTEIN 26-NOV-15 5EZ5 TITLE CRYSTAL STRUCTURE OF ACTIVE RAB11A (S20V) IN COMPLEX WITH GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-11A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 8-175; COMPND 5 SYNONYM: RAB-11,YL8; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB11A, RAB11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SMALL G PROTEIN, P-LOOP, RAS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.-C.SHIN,J.H.YOON,H.H.PARK REVDAT 2 20-MAR-24 5EZ5 1 LINK REVDAT 1 07-DEC-16 5EZ5 0 JRNL AUTH Y.-C.SHIN,J.H.YOON,H.H.PARK JRNL TITL CRYSTAL STRUCTURE OF ACTIVE RAB11A (S20V) IN COMPLEX WITH JRNL TITL 2 GTP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 782 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1076 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.471 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.316 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.261 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.027 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2732 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3722 ; 2.005 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 6.846 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;37.742 ;23.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 440 ;17.849 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.646 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 438 ; 0.262 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2020 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1660 ; 0.970 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2658 ; 1.885 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1072 ; 2.805 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 4.467 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EZ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CHLORIDE, TRIS, MAGNESSIUM REMARK 280 CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.05550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.05550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 74.72200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.05550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.05550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 74.72200 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 37.05550 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 37.05550 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 74.72200 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 37.05550 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 37.05550 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 74.72200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 74.11100 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 ARG A 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 470 LYS B 145 CG CD CE NZ REMARK 470 GLU B 162 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 128 CA - CB - CG ANGL. DEV. = 19.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 34 19.83 47.83 REMARK 500 GLU A 39 55.10 -101.88 REMARK 500 LYS A 125 51.55 70.36 REMARK 500 LEU A 128 42.90 -76.16 REMARK 500 ASN A 160 4.75 80.90 REMARK 500 ASN B 34 14.00 49.66 REMARK 500 GLU B 71 50.08 -142.14 REMARK 500 LEU B 128 29.13 -59.32 REMARK 500 SER B 158 -8.20 56.55 REMARK 500 ASN B 160 5.28 80.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 25 OG REMARK 620 2 THR A 43 OG1 88.1 REMARK 620 3 GTP A 202 O1B 89.3 158.7 REMARK 620 4 GTP A 202 O1G 164.3 94.0 83.1 REMARK 620 5 HOH A 301 O 77.6 82.7 76.0 87.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 25 OG REMARK 620 2 THR B 43 OG1 86.1 REMARK 620 3 GTP B 202 O3G 161.5 91.5 REMARK 620 4 GTP B 202 O2B 88.4 158.1 87.0 REMARK 620 5 HOH B 301 O 76.4 79.9 85.1 78.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP B 202 DBREF 5EZ5 A 8 175 UNP P62491 RB11A_HUMAN 8 175 DBREF 5EZ5 B 8 175 UNP P62491 RB11A_HUMAN 8 175 SEQADV 5EZ5 VAL A 20 UNP P62491 SER 20 ENGINEERED MUTATION SEQADV 5EZ5 VAL B 20 UNP P62491 SER 20 ENGINEERED MUTATION SEQRES 1 A 168 TYR ASP TYR LEU PHE LYS VAL VAL LEU ILE GLY ASP VAL SEQRES 2 A 168 GLY VAL GLY LYS SER ASN LEU LEU SER ARG PHE THR ARG SEQRES 3 A 168 ASN GLU PHE ASN LEU GLU SER LYS SER THR ILE GLY VAL SEQRES 4 A 168 GLU PHE ALA THR ARG SER ILE GLN VAL ASP GLY LYS THR SEQRES 5 A 168 ILE LYS ALA GLN ILE TRP ASP THR ALA GLY GLN GLU ARG SEQRES 6 A 168 TYR ARG ALA ILE THR SER ALA TYR TYR ARG GLY ALA VAL SEQRES 7 A 168 GLY ALA LEU LEU VAL TYR ASP ILE ALA LYS HIS LEU THR SEQRES 8 A 168 TYR GLU ASN VAL GLU ARG TRP LEU LYS GLU LEU ARG ASP SEQRES 9 A 168 HIS ALA ASP SER ASN ILE VAL ILE MET LEU VAL GLY ASN SEQRES 10 A 168 LYS SER ASP LEU ARG HIS LEU ARG ALA VAL PRO THR ASP SEQRES 11 A 168 GLU ALA ARG ALA PHE ALA GLU LYS ASN GLY LEU SER PHE SEQRES 12 A 168 ILE GLU THR SER ALA LEU ASP SER THR ASN VAL GLU ALA SEQRES 13 A 168 ALA PHE GLN THR ILE LEU THR GLU ILE TYR ARG ILE SEQRES 1 B 168 TYR ASP TYR LEU PHE LYS VAL VAL LEU ILE GLY ASP VAL SEQRES 2 B 168 GLY VAL GLY LYS SER ASN LEU LEU SER ARG PHE THR ARG SEQRES 3 B 168 ASN GLU PHE ASN LEU GLU SER LYS SER THR ILE GLY VAL SEQRES 4 B 168 GLU PHE ALA THR ARG SER ILE GLN VAL ASP GLY LYS THR SEQRES 5 B 168 ILE LYS ALA GLN ILE TRP ASP THR ALA GLY GLN GLU ARG SEQRES 6 B 168 TYR ARG ALA ILE THR SER ALA TYR TYR ARG GLY ALA VAL SEQRES 7 B 168 GLY ALA LEU LEU VAL TYR ASP ILE ALA LYS HIS LEU THR SEQRES 8 B 168 TYR GLU ASN VAL GLU ARG TRP LEU LYS GLU LEU ARG ASP SEQRES 9 B 168 HIS ALA ASP SER ASN ILE VAL ILE MET LEU VAL GLY ASN SEQRES 10 B 168 LYS SER ASP LEU ARG HIS LEU ARG ALA VAL PRO THR ASP SEQRES 11 B 168 GLU ALA ARG ALA PHE ALA GLU LYS ASN GLY LEU SER PHE SEQRES 12 B 168 ILE GLU THR SER ALA LEU ASP SER THR ASN VAL GLU ALA SEQRES 13 B 168 ALA PHE GLN THR ILE LEU THR GLU ILE TYR ARG ILE HET MG A 201 1 HET GTP A 202 32 HET MG B 201 1 HET GTP B 202 32 HETNAM MG MAGNESIUM ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 GTP 2(C10 H16 N5 O14 P3) FORMUL 7 HOH *10(H2 O) HELIX 1 AA1 GLY A 23 ASN A 34 1 12 HELIX 2 AA2 THR A 77 ARG A 82 1 6 HELIX 3 AA3 LYS A 95 ASN A 101 1 7 HELIX 4 AA4 ASN A 101 ALA A 113 1 13 HELIX 5 AA5 LEU A 128 ARG A 132 5 5 HELIX 6 AA6 PRO A 135 ASN A 146 1 12 HELIX 7 AA7 ASN A 160 ILE A 175 1 16 HELIX 8 AA8 GLY B 23 ASN B 34 1 12 HELIX 9 AA9 THR B 77 ARG B 82 1 6 HELIX 10 AB1 LYS B 95 ASN B 101 1 7 HELIX 11 AB2 ASN B 101 ALA B 113 1 13 HELIX 12 AB3 LEU B 128 ARG B 132 5 5 HELIX 13 AB4 PRO B 135 ASN B 146 1 12 HELIX 14 AB5 ASN B 160 ILE B 175 1 16 SHEET 1 AA1 6 VAL A 46 VAL A 55 0 SHEET 2 AA1 6 LYS A 58 THR A 67 -1 O ILE A 64 N ALA A 49 SHEET 3 AA1 6 TYR A 10 ILE A 17 1 N VAL A 14 O GLN A 63 SHEET 4 AA1 6 GLY A 86 ASP A 92 1 O LEU A 88 N VAL A 15 SHEET 5 AA1 6 VAL A 118 ASN A 124 1 O VAL A 118 N ALA A 87 SHEET 6 AA1 6 SER A 149 GLU A 152 1 O SER A 149 N LEU A 121 SHEET 1 AA2 6 VAL B 46 VAL B 55 0 SHEET 2 AA2 6 LYS B 58 THR B 67 -1 O ILE B 64 N ALA B 49 SHEET 3 AA2 6 TYR B 10 ILE B 17 1 N VAL B 14 O GLN B 63 SHEET 4 AA2 6 GLY B 86 ASP B 92 1 O VAL B 90 N ILE B 17 SHEET 5 AA2 6 VAL B 118 ASN B 124 1 O ASN B 124 N TYR B 91 SHEET 6 AA2 6 SER B 149 GLU B 152 1 O SER B 149 N LEU B 121 LINK OG SER A 25 MG MG A 201 1555 1555 2.08 LINK OG1 THR A 43 MG MG A 201 1555 1555 1.92 LINK MG MG A 201 O1B GTP A 202 1555 1555 1.97 LINK MG MG A 201 O1G GTP A 202 1555 1555 2.03 LINK MG MG A 201 O HOH A 301 1555 1555 2.26 LINK OG SER B 25 MG MG B 201 1555 1555 2.15 LINK OG1 THR B 43 MG MG B 201 1555 1555 2.00 LINK MG MG B 201 O3G GTP B 202 1555 1555 2.06 LINK MG MG B 201 O2B GTP B 202 1555 1555 1.94 LINK MG MG B 201 O HOH B 301 1555 1555 2.10 SITE 1 AC1 4 SER A 25 THR A 43 GTP A 202 HOH A 301 SITE 1 AC2 24 VAL A 20 GLY A 21 VAL A 22 GLY A 23 SITE 2 AC2 24 LYS A 24 SER A 25 ASN A 26 PHE A 36 SITE 3 AC2 24 ASN A 37 LEU A 38 SER A 40 SER A 42 SITE 4 AC2 24 THR A 43 ALA A 68 GLY A 69 ASN A 124 SITE 5 AC2 24 LYS A 125 ASP A 127 LEU A 128 SER A 154 SITE 6 AC2 24 ALA A 155 LEU A 156 MG A 201 HOH A 301 SITE 1 AC3 5 SER B 25 THR B 43 ASP B 66 GTP B 202 SITE 2 AC3 5 HOH B 301 SITE 1 AC4 24 VAL B 20 GLY B 21 VAL B 22 GLY B 23 SITE 2 AC4 24 LYS B 24 SER B 25 ASN B 26 PHE B 36 SITE 3 AC4 24 ASN B 37 LEU B 38 SER B 40 SER B 42 SITE 4 AC4 24 THR B 43 ALA B 68 GLY B 69 ASN B 124 SITE 5 AC4 24 LYS B 125 ASP B 127 SER B 154 ALA B 155 SITE 6 AC4 24 LEU B 156 MG B 201 HOH B 301 HOH B 303 CRYST1 74.111 74.111 149.444 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013493 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006691 0.00000