HEADER TRANSFERASE 27-NOV-15 5F0D OBSLTE 13-JAN-16 5F0D 5FET TITLE CRYSTAL STRUCTURE OF PVX_084705 IN PRESENCE OF COMPOUND 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CGMP-DEPENDENT PROTEIN KINASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX (STRAIN SALVADOR I); SOURCE 3 ORGANISM_TAXID: 126793; SOURCE 4 STRAIN: SALVADOR I; SOURCE 5 GENE: PVX_084705; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9 KEYWDS AGC KINASE, PKG, STRUCTURAL GENOMICS, MALARIA, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,W.TEMPEL,J.R.WALKER,H.HE,A.SEITOVA,T.HILLS,A.M.NECULAI, AUTHOR 2 D.A.BAKER,C.FLUECK,C.A.KETTLEBOROUGH,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 3 C.BOUNTRA,R.HUI,A.HUTCHINSON,M.EL BAKKOURI,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 3 13-JAN-16 5F0D 1 OBSLTE REVDAT 2 30-DEC-15 5F0D 1 SPRSDE REVDAT 1 16-DEC-15 5F0D 0 SPRSDE 30-DEC-15 5F0D 4OXJ JRNL AUTH A.K.WERNIMONT,W.TEMPEL,J.R.WALKER,H.HE,A.SEITOVA,T.HILLS, JRNL AUTH 2 A.M.NECULAI,D.A.BAKER,C.FLUECK,C.A.KETTLEBOROUGH, JRNL AUTH 3 C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,R.HUI,A.HUTCHINSON, JRNL AUTH 4 M.EL BAKKOURI JRNL TITL CRYSTAL STRUCTURE OF PVX_084705 IN PRESENCE OF COMPOUND 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 27276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1368 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.07 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2844 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2359 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2709 REMARK 3 BIN R VALUE (WORKING SET) : 0.2332 REMARK 3 BIN FREE R VALUE : 0.2896 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.75 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 135 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6199 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 61 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -25.07830 REMARK 3 B22 (A**2) : 12.18910 REMARK 3 B33 (A**2) : 12.88920 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 10.76830 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.951 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.359 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.878 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.846 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 12446 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 22430 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2752 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 163 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1921 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 12446 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 860 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 12887 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.83 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.10 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.91 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -31.5791 -10.9158 19.0894 REMARK 3 T TENSOR REMARK 3 T11: -0.0870 T22: -0.1718 REMARK 3 T33: -0.0825 T12: 0.0113 REMARK 3 T13: 0.0062 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.5963 L22: 0.6514 REMARK 3 L33: 0.8506 L12: 0.0244 REMARK 3 L13: 0.0709 L23: -0.2345 REMARK 3 S TENSOR REMARK 3 S11: 0.1220 S12: -0.0394 S13: -0.0799 REMARK 3 S21: 0.0446 S22: -0.0465 S23: -0.2032 REMARK 3 S31: 0.0219 S32: 0.2239 S33: -0.0755 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000, HKL REMARK 200 DATA SCALING SOFTWARE : HKL-3000, HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.94200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4MYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 5000 MME, 5% TACSIMATE, 0.1 M REMARK 280 HEPES, 15 MM SPERMIDINE, 25% GLYCEROL, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 95.08950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.33100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 95.08950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 58.33100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ARG A 6 REMARK 465 ASN A 7 REMARK 465 LYS A 8 REMARK 465 SER A 14 REMARK 465 ASN A 15 REMARK 465 ASP A 16 REMARK 465 ASP A 17 REMARK 465 PHE A 18 REMARK 465 SER A 19 REMARK 465 THR A 544 REMARK 465 PHE A 545 REMARK 465 SER A 604 REMARK 465 ASN A 605 REMARK 465 GLU A 817 REMARK 465 ASP A 818 REMARK 465 ILE A 819 REMARK 465 ASP A 820 REMARK 465 ILE A 821 REMARK 465 LYS A 822 REMARK 465 GLN A 823 REMARK 465 ILE A 824 REMARK 465 GLU A 825 REMARK 465 GLU A 826 REMARK 465 GLU A 827 REMARK 465 ASP A 828 REMARK 465 ALA A 829 REMARK 465 LEU A 830 REMARK 465 ASN A 831 REMARK 465 GLU A 832 REMARK 465 GLY A 833 REMARK 465 GLU A 834 REMARK 465 PRO A 835 REMARK 465 LEU A 836 REMARK 465 ASP A 837 REMARK 465 GLY A 838 REMARK 465 ASP A 839 REMARK 465 ASP A 840 REMARK 465 SER A 841 REMARK 465 TRP A 842 REMARK 465 ASP A 843 REMARK 465 VAL A 844 REMARK 465 ASP A 845 REMARK 465 PHE A 846 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 ASP A 22 CG OD1 OD2 REMARK 470 GLN A 30 CG CD OE1 NE2 REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 47 CD CE NZ REMARK 470 ILE A 60 CD1 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLN A 81 CG CD OE1 NE2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 TYR A 99 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 100 CG1 CG2 REMARK 470 ASP A 102 CG OD1 OD2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 VAL A 105 CG1 CG2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 SER A 107 OG REMARK 470 LYS A 110 CE NZ REMARK 470 GLN A 124 CG CD OE1 NE2 REMARK 470 MET A 130 SD CE REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 THR A 133 OG1 CG2 REMARK 470 LYS A 198 CE NZ REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 LYS A 213 CE NZ REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 LYS A 261 CE NZ REMARK 470 LEU A 262 CD1 CD2 REMARK 470 GLU A 287 CG CD OE1 OE2 REMARK 470 LYS A 318 CG CD CE NZ REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 LYS A 320 CD CE NZ REMARK 470 ASP A 339 OD1 OD2 REMARK 470 LYS A 363 CG CD CE NZ REMARK 470 ARG A 431 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 457 CG CD OE1 OE2 REMARK 470 LYS A 463 CG CD CE NZ REMARK 470 ARG A 466 CZ NH1 NH2 REMARK 470 LYS A 470 CD CE NZ REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 LYS A 523 CE NZ REMARK 470 GLN A 525 CD OE1 NE2 REMARK 470 THR A 527 OG1 CG2 REMARK 470 LYS A 528 CG CD CE NZ REMARK 470 GLU A 535 CG CD OE1 OE2 REMARK 470 ARG A 542 NE CZ NH1 NH2 REMARK 470 LYS A 554 CG CD CE NZ REMARK 470 SER A 566 OG REMARK 470 LYS A 567 CD CE NZ REMARK 470 ARG A 568 CG CD NE CZ NH1 NH2 REMARK 470 SER A 569 OG REMARK 470 ILE A 570 CG1 CG2 CD1 REMARK 470 ILE A 571 CG2 CD1 REMARK 470 SER A 572 OG REMARK 470 LEU A 573 CG CD1 CD2 REMARK 470 GLN A 576 CG CD OE1 NE2 REMARK 470 ASN A 577 CG OD1 ND2 REMARK 470 LYS A 580 CG CD CE NZ REMARK 470 LYS A 602 CG CD CE NZ REMARK 470 LYS A 667 CG CD CE NZ REMARK 470 LYS A 704 CE NZ REMARK 470 ASP A 732 CG OD1 OD2 REMARK 470 GLU A 805 CD OE1 OE2 REMARK 470 LYS A 811 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 5 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 105 -54.34 -121.75 REMARK 500 ASP A 220 19.64 59.15 REMARK 500 ASN A 227 -167.66 -108.75 REMARK 500 LYS A 318 -52.24 -29.85 REMARK 500 LYS A 320 44.05 -96.25 REMARK 500 ASP A 339 -97.60 62.02 REMARK 500 ASN A 471 -0.61 68.01 REMARK 500 SER A 495 71.42 40.18 REMARK 500 GLN A 575 50.11 -117.63 REMARK 500 VAL A 598 -61.10 -107.98 REMARK 500 ASP A 657 51.18 -157.34 REMARK 500 LEU A 767 53.79 -104.25 REMARK 500 SER A 778 -169.88 -107.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1TR A 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5F0A RELATED DB: PDB DBREF 5F0D A 1 846 UNP A5K0N4 A5K0N4_PLAVS 1 846 SEQADV 5F0D GLY A 0 UNP A5K0N4 EXPRESSION TAG SEQRES 1 A 847 GLY MET ARG CYS ASN GLU ARG ASN LYS LYS LYS ALA ILE SEQRES 2 A 847 PHE SER ASN ASP ASP PHE SER GLY GLU ASP THR LEU MET SEQRES 3 A 847 GLU ASP HIS LEU GLN LEU ARG GLU LYS LEU SER GLU ASP SEQRES 4 A 847 ILE GLU MET ILE LYS ALA SER LEU LYS ASN ASN LEU VAL SEQRES 5 A 847 CYS SER THR LEU ASN ASP ASN GLU ILE LEU THR LEU SER SEQRES 6 A 847 ASN TYR MET GLN PHE PHE VAL PHE LYS GLY GLY ASP LEU SEQRES 7 A 847 VAL ILE LYS GLN GLY GLU LYS GLY SER TYR PHE PHE ILE SEQRES 8 A 847 ILE ASN SER GLY LYS PHE ASP VAL TYR VAL ASN ASP LYS SEQRES 9 A 847 LYS VAL LYS SER MET GLY LYS GLY SER SER PHE GLY GLU SEQRES 10 A 847 ALA ALA LEU ILE HIS ASN THR GLN ARG SER ALA THR ILE SEQRES 11 A 847 MET ALA GLU THR ASP GLY THR LEU TRP GLY VAL GLN ARG SEQRES 12 A 847 SER THR PHE ARG ALA THR LEU LYS GLN LEU SER ASN ARG SEQRES 13 A 847 ASN PHE ASN GLU ASN ARG SER PHE ILE ASP SER VAL SER SEQRES 14 A 847 VAL PHE ASP MET LEU THR GLU ALA GLN LYS ASN MET ILE SEQRES 15 A 847 THR ASN ALA CYS VAL ILE GLN MET PHE LYS PRO GLY GLU SEQRES 16 A 847 THR ILE VAL LYS GLN GLY ASP TYR GLY ASP VAL LEU PHE SEQRES 17 A 847 ILE LEU LYS GLU GLY LYS ALA THR VAL PHE ILE ASN ASP SEQRES 18 A 847 LYS GLU ILE ARG VAL LEU ASN LYS GLY SER TYR PHE GLY SEQRES 19 A 847 GLU ARG ALA LEU LEU TYR ASP GLU PRO ARG SER ALA THR SEQRES 20 A 847 ILE ILE ALA LYS GLU PRO THR ALA CYS ALA SER ILE CYS SEQRES 21 A 847 ARG LYS LEU LEU ASN ILE VAL LEU GLY ASN LEU GLN VAL SEQRES 22 A 847 VAL LEU PHE ARG ASN ILE MET THR GLU ALA LEU GLN GLN SEQRES 23 A 847 SER GLU ILE PHE ARG GLN PHE SER ALA GLU GLN LEU ASN SEQRES 24 A 847 ASP LEU ALA ASP THR ALA ILE VAL ARG ASP TYR PRO ALA SEQRES 25 A 847 ASN TYR HIS ILE LEU HIS LYS ASP LYS VAL LYS SER VAL SEQRES 26 A 847 LYS TYR LEU ILE VAL LEU GLU GLY LYS VAL GLU LEU PHE SEQRES 27 A 847 LEU ASP ASP GLU SER ILE GLY ILE LEU THR ARG GLY LYS SEQRES 28 A 847 SER PHE GLY ASP GLN TYR VAL LEU ASN GLN LYS GLN LYS SEQRES 29 A 847 PHE ARG HIS THR VAL LYS SER LEU ASP VAL CYS LYS ILE SEQRES 30 A 847 ALA LEU ILE THR GLU SER CYS LEU ALA ASP CYS LEU GLY SEQRES 31 A 847 ASP ASN ASN ILE ASP ALA SER ILE ASP HIS ASN ASN LYS SEQRES 32 A 847 LYS SER ILE ILE LYS LYS MET TYR ILE PHE ARG TYR LEU SEQRES 33 A 847 SER GLU GLN GLN CYS ASN LEU LEU ILE GLU ALA PHE ARG SEQRES 34 A 847 THR THR ARG TYR GLU GLU GLY ASP TYR ILE ILE GLN GLU SEQRES 35 A 847 GLY GLU VAL GLY SER ARG PHE TYR ILE ILE LYS ASN GLY SEQRES 36 A 847 GLU VAL GLU VAL THR LYS ASN GLY LYS ARG LEU ARG THR SEQRES 37 A 847 LEU GLY LYS ASN ASP TYR PHE GLY GLU ARG ALA LEU LEU SEQRES 38 A 847 TYR ASP GLU PRO ARG THR ALA SER ILE ILE SER LYS ALA SEQRES 39 A 847 THR SER VAL GLU CYS TRP PHE VAL ASP LYS SER VAL PHE SEQRES 40 A 847 LEU GLN ILE ILE GLN GLY PRO MET LEU THR HIS LEU GLU SEQRES 41 A 847 GLU ARG ILE LYS MET GLN ASP THR LYS VAL GLU MET HIS SEQRES 42 A 847 GLU LEU GLU THR GLU ARG ILE ILE GLY ARG GLY THR PHE SEQRES 43 A 847 GLY THR VAL LYS LEU VAL HIS HIS LYS PRO THR GLN ILE SEQRES 44 A 847 ARG TYR ALA LEU LYS CYS VAL SER LYS ARG SER ILE ILE SEQRES 45 A 847 SER LEU ASN GLN GLN ASN ASN ILE LYS LEU GLU ARG GLU SEQRES 46 A 847 ILE THR ALA GLU ASN ASP HIS PRO PHE ILE ILE ARG LEU SEQRES 47 A 847 VAL ARG THR PHE LYS ASP SER ASN CYS PHE TYR PHE LEU SEQRES 48 A 847 THR GLU LEU VAL THR GLY GLY GLU LEU TYR ASP ALA ILE SEQRES 49 A 847 ARG LYS LEU GLY LEU LEU SER LYS PRO GLN ALA GLN PHE SEQRES 50 A 847 TYR LEU GLY SER ILE ILE LEU ALA ILE GLU TYR LEU HIS SEQRES 51 A 847 GLU ARG ASN ILE VAL TYR ARG ASP LEU LYS PRO GLU ASN SEQRES 52 A 847 ILE LEU LEU ASP LYS GLN GLY TYR VAL LYS LEU ILE ASP SEQRES 53 A 847 PHE GLY CYS ALA LYS LYS ILE GLN GLY ARG ALA TYR THR SEQRES 54 A 847 LEU VAL GLY THR PRO HIS TYR MET ALA PRO GLU VAL ILE SEQRES 55 A 847 LEU GLY LYS GLY TYR GLY CYS THR VAL ASP ILE TRP ALA SEQRES 56 A 847 LEU GLY VAL CYS LEU TYR GLU PHE ILE CYS GLY PRO LEU SEQRES 57 A 847 PRO PHE GLY ASN ASP GLN GLU ASP GLN LEU GLU ILE PHE SEQRES 58 A 847 ARG ASP ILE LEU THR GLY GLN LEU THR PHE PRO ASP TYR SEQRES 59 A 847 VAL SER ASP GLN ASP SER ILE ASN LEU MET LYS ARG LEU SEQRES 60 A 847 LEU CYS ARG LEU PRO GLN GLY ARG ILE GLY CYS SER ILE SEQRES 61 A 847 ASN GLY PHE LYS ASP ILE LYS GLU HIS ALA PHE PHE GLY SEQRES 62 A 847 ASN PHE ASN TRP ASP LYS LEU ALA GLY ARG LEU LEU GLU SEQRES 63 A 847 PRO PRO LEU VAL SER LYS GLY GLU THR TYR ALA GLU ASP SEQRES 64 A 847 ILE ASP ILE LYS GLN ILE GLU GLU GLU ASP ALA LEU ASN SEQRES 65 A 847 GLU GLY GLU PRO LEU ASP GLY ASP ASP SER TRP ASP VAL SEQRES 66 A 847 ASP PHE HET 1TR A 901 27 HETNAM 1TR 4-[7-[(DIMETHYLAMINO)METHYL]-2-(4-FLUOROPHENYL) HETNAM 2 1TR IMIDAZO[1,2-A]PYRIDIN-3-YL]PYRIMIDIN-2-AMINE FORMUL 2 1TR C20 H19 F N6 FORMUL 3 HOH *61(H2 O) HELIX 1 AA1 GLU A 21 LEU A 29 1 9 HELIX 2 AA2 LEU A 35 ASN A 48 1 14 HELIX 3 AA3 ASN A 56 TYR A 66 1 11 HELIX 4 AA4 GLU A 116 HIS A 121 1 6 HELIX 5 AA5 ARG A 142 VAL A 167 1 26 HELIX 6 AA6 THR A 174 ALA A 184 1 11 HELIX 7 AA7 GLY A 233 TYR A 239 1 7 HELIX 8 AA8 ARG A 260 LEU A 267 1 8 HELIX 9 AA9 ASN A 269 GLN A 285 1 17 HELIX 10 AB1 SER A 286 GLN A 291 1 6 HELIX 11 AB2 SER A 293 THR A 303 1 11 HELIX 12 AB3 GLY A 353 ASN A 359 1 7 HELIX 13 AB4 GLU A 381 GLY A 389 1 9 HELIX 14 AB5 ASN A 392 LYS A 407 1 16 HELIX 15 AB6 MET A 409 TYR A 414 1 6 HELIX 16 AB7 SER A 416 ALA A 426 1 11 HELIX 17 AB8 GLY A 475 LEU A 480 5 6 HELIX 18 AB9 LYS A 503 ILE A 510 1 8 HELIX 19 AC1 GLN A 511 MET A 524 1 14 HELIX 20 AC2 GLU A 530 HIS A 532 5 3 HELIX 21 AC3 SER A 566 LEU A 573 1 8 HELIX 22 AC4 ASN A 577 ASN A 589 1 13 HELIX 23 AC5 GLU A 618 GLY A 627 1 10 HELIX 24 AC6 SER A 630 ARG A 651 1 22 HELIX 25 AC7 LYS A 659 GLU A 661 5 3 HELIX 26 AC8 THR A 692 MET A 696 5 5 HELIX 27 AC9 ALA A 697 GLY A 703 1 7 HELIX 28 AD1 THR A 709 CYS A 724 1 16 HELIX 29 AD2 ASP A 735 THR A 745 1 11 HELIX 30 AD3 ASP A 756 LEU A 767 1 12 HELIX 31 AD4 PHE A 782 GLU A 787 1 6 HELIX 32 AD5 HIS A 788 GLY A 792 5 5 HELIX 33 AD6 ASN A 795 GLY A 801 1 7 SHEET 1 AA1 4 GLN A 68 VAL A 71 0 SHEET 2 AA1 4 THR A 136 GLN A 141 -1 O GLY A 139 N GLN A 68 SHEET 3 AA1 4 TYR A 87 SER A 93 -1 N ILE A 90 O TRP A 138 SHEET 4 AA1 4 SER A 113 PHE A 114 -1 O PHE A 114 N PHE A 89 SHEET 1 AA2 4 LEU A 77 ILE A 79 0 SHEET 2 AA2 4 THR A 128 ALA A 131 -1 O ILE A 129 N VAL A 78 SHEET 3 AA2 4 PHE A 96 TYR A 99 -1 N TYR A 99 O THR A 128 SHEET 4 AA2 4 LYS A 104 MET A 108 -1 O LYS A 106 N VAL A 98 SHEET 1 AA3 2 LYS A 84 GLY A 85 0 SHEET 2 AA3 2 THR A 123 GLN A 124 -1 O THR A 123 N GLY A 85 SHEET 1 AA4 4 VAL A 186 PHE A 190 0 SHEET 2 AA4 4 THR A 253 CYS A 259 -1 O THR A 253 N PHE A 190 SHEET 3 AA4 4 VAL A 205 GLU A 211 -1 N LEU A 206 O ILE A 258 SHEET 4 AA4 4 TYR A 231 PHE A 232 -1 O PHE A 232 N PHE A 207 SHEET 1 AA5 4 THR A 195 VAL A 197 0 SHEET 2 AA5 4 THR A 246 ALA A 249 -1 O ILE A 247 N ILE A 196 SHEET 3 AA5 4 ALA A 214 ILE A 218 -1 N THR A 215 O ILE A 248 SHEET 4 AA5 4 LYS A 221 LEU A 226 -1 O LEU A 226 N ALA A 214 SHEET 1 AA6 4 ILE A 305 TYR A 309 0 SHEET 2 AA6 4 CYS A 374 THR A 380 -1 O ILE A 376 N ARG A 307 SHEET 3 AA6 4 VAL A 324 GLU A 331 -1 N ILE A 328 O ALA A 377 SHEET 4 AA6 4 SER A 351 PHE A 352 -1 O PHE A 352 N LEU A 327 SHEET 1 AA7 4 HIS A 314 LEU A 316 0 SHEET 2 AA7 4 HIS A 366 SER A 370 -1 O VAL A 368 N LEU A 316 SHEET 3 AA7 4 VAL A 334 LEU A 338 -1 N GLU A 335 O LYS A 369 SHEET 4 AA7 4 GLU A 341 LEU A 346 -1 O GLU A 341 N LEU A 338 SHEET 1 AA8 4 ARG A 428 TYR A 432 0 SHEET 2 AA8 4 VAL A 496 ASP A 502 -1 O PHE A 500 N ARG A 428 SHEET 3 AA8 4 ARG A 447 ASN A 453 -1 N ILE A 450 O TRP A 499 SHEET 4 AA8 4 TYR A 473 PHE A 474 -1 O PHE A 474 N TYR A 449 SHEET 1 AA9 4 TYR A 437 ILE A 439 0 SHEET 2 AA9 4 SER A 488 SER A 491 -1 O ILE A 489 N ILE A 438 SHEET 3 AA9 4 VAL A 456 LYS A 460 -1 N THR A 459 O SER A 488 SHEET 4 AA9 4 LYS A 463 LEU A 468 -1 O LEU A 468 N VAL A 456 SHEET 1 AB1 5 LEU A 534 GLY A 541 0 SHEET 2 AB1 5 THR A 547 HIS A 553 -1 O LEU A 550 N ARG A 538 SHEET 3 AB1 5 ARG A 559 VAL A 565 -1 O LEU A 562 N LYS A 549 SHEET 4 AB1 5 PHE A 607 GLU A 612 -1 O THR A 611 N ALA A 561 SHEET 5 AB1 5 LEU A 597 ARG A 599 -1 N VAL A 598 O LEU A 610 SHEET 1 AB2 2 ILE A 653 VAL A 654 0 SHEET 2 AB2 2 LYS A 680 LYS A 681 -1 O LYS A 680 N VAL A 654 SHEET 1 AB3 2 ILE A 663 LEU A 665 0 SHEET 2 AB3 2 VAL A 671 LEU A 673 -1 O LYS A 672 N LEU A 664 SITE 1 AC1 11 ILE A 540 VAL A 548 ALA A 561 PHE A 609 SITE 2 AC1 11 THR A 611 GLU A 612 VAL A 614 GLU A 618 SITE 3 AC1 11 GLU A 661 LEU A 664 ILE A 674 CRYST1 190.179 116.662 67.411 90.00 94.28 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005258 0.000000 0.000394 0.00000 SCALE2 0.000000 0.008572 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014876 0.00000