data_5F0Q # _entry.id 5F0Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5F0Q pdb_00005f0q 10.2210/pdb5f0q/pdb WWPDB D_1000215805 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5F0S _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5F0Q _pdbx_database_status.recvd_initial_deposition_date 2015-11-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tahirov, T.H.' 1 'Baranovskiy, A.G.' 2 'Babayeva, N.D.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 291 _citation.language ? _citation.page_first 10006 _citation.page_last 10020 _citation.title 'Mechanism of Concerted RNA-DNA Primer Synthesis by the Human Primosome.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M116.717405 _citation.pdbx_database_id_PubMed 26975377 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Baranovskiy, A.G.' 1 ? primary 'Babayeva, N.D.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Gu, J.' 4 ? primary 'Suwa, Y.' 5 ? primary 'Pavlov, Y.I.' 6 ? primary 'Tahirov, T.H.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5F0Q _cell.details ? _cell.formula_units_Z ? _cell.length_a 122.507 _cell.length_a_esd ? _cell.length_b 126.002 _cell.length_b_esd ? _cell.length_c 83.942 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA primase large subunit' 22027.273 2 2.7.7.- ? 'UNP residues 266-456' ? 2 polymer syn ;RNA (5'-R(P*GP*GP*CP*GP*GP*C)-3') ; 2106.188 2 ? ? ? ;contain 5'-triphosphate ; 3 polymer syn ;DNA (5'-D(*GP*CP*CP*GP*CP*CP*AP*AP*CP*AP*TP*A)-3') ; 3616.383 2 ? ? ? ? 4 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 2 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 water nat water 18.015 65 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA primase 58 kDa subunit,p58' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILN ; ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILN ; A,B ? 2 polyribonucleotide no yes '(GTP)GCGGC' GGCGGC C,E ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)(DC)(DC)(DA)(DA)(DC)(DA)(DT)(DA)' GCCGCCAACATA D,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 VAL n 1 4 GLY n 1 5 LYS n 1 6 ILE n 1 7 SER n 1 8 LEU n 1 9 ASP n 1 10 GLN n 1 11 ILE n 1 12 ASP n 1 13 LEU n 1 14 LEU n 1 15 SER n 1 16 THR n 1 17 LYS n 1 18 SER n 1 19 PHE n 1 20 PRO n 1 21 PRO n 1 22 CYS n 1 23 MET n 1 24 ARG n 1 25 GLN n 1 26 LEU n 1 27 HIS n 1 28 LYS n 1 29 ALA n 1 30 LEU n 1 31 ARG n 1 32 GLU n 1 33 ASN n 1 34 HIS n 1 35 HIS n 1 36 LEU n 1 37 ARG n 1 38 HIS n 1 39 GLY n 1 40 GLY n 1 41 ARG n 1 42 MET n 1 43 GLN n 1 44 TYR n 1 45 GLY n 1 46 LEU n 1 47 PHE n 1 48 LEU n 1 49 LYS n 1 50 GLY n 1 51 ILE n 1 52 GLY n 1 53 LEU n 1 54 THR n 1 55 LEU n 1 56 GLU n 1 57 GLN n 1 58 ALA n 1 59 LEU n 1 60 GLN n 1 61 PHE n 1 62 TRP n 1 63 LYS n 1 64 GLN n 1 65 GLU n 1 66 PHE n 1 67 ILE n 1 68 LYS n 1 69 GLY n 1 70 LYS n 1 71 MET n 1 72 ASP n 1 73 PRO n 1 74 ASP n 1 75 LYS n 1 76 PHE n 1 77 ASP n 1 78 LYS n 1 79 GLY n 1 80 TYR n 1 81 SER n 1 82 TYR n 1 83 ASN n 1 84 ILE n 1 85 ARG n 1 86 HIS n 1 87 SER n 1 88 PHE n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 GLY n 1 93 LYS n 1 94 ARG n 1 95 THR n 1 96 ASP n 1 97 TYR n 1 98 THR n 1 99 PRO n 1 100 PHE n 1 101 SER n 1 102 CYS n 1 103 LEU n 1 104 LYS n 1 105 ILE n 1 106 ILE n 1 107 LEU n 1 108 SER n 1 109 ASN n 1 110 PRO n 1 111 PRO n 1 112 SER n 1 113 GLN n 1 114 GLY n 1 115 ASP n 1 116 TYR n 1 117 HIS n 1 118 GLY n 1 119 CYS n 1 120 PRO n 1 121 PHE n 1 122 ARG n 1 123 HIS n 1 124 SER n 1 125 ASP n 1 126 PRO n 1 127 GLU n 1 128 LEU n 1 129 LEU n 1 130 LYS n 1 131 GLN n 1 132 LYS n 1 133 LEU n 1 134 GLN n 1 135 SER n 1 136 TYR n 1 137 LYS n 1 138 ILE n 1 139 SER n 1 140 PRO n 1 141 GLY n 1 142 GLY n 1 143 ILE n 1 144 SER n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 ASP n 1 149 LEU n 1 150 VAL n 1 151 LYS n 1 152 GLY n 1 153 THR n 1 154 HIS n 1 155 TYR n 1 156 GLN n 1 157 VAL n 1 158 ALA n 1 159 CYS n 1 160 GLN n 1 161 LYS n 1 162 TYR n 1 163 PHE n 1 164 GLU n 1 165 MET n 1 166 ILE n 1 167 HIS n 1 168 ASN n 1 169 VAL n 1 170 ASP n 1 171 ASP n 1 172 CYS n 1 173 GLY n 1 174 PHE n 1 175 SER n 1 176 LEU n 1 177 ASN n 1 178 HIS n 1 179 PRO n 1 180 ASN n 1 181 GLN n 1 182 PHE n 1 183 PHE n 1 184 CYS n 1 185 GLU n 1 186 SER n 1 187 GLN n 1 188 ARG n 1 189 ILE n 1 190 LEU n 1 191 ASN n 2 1 GTP n 2 2 G n 2 3 C n 2 4 G n 2 5 G n 2 6 C n 3 1 DG n 3 2 DC n 3 3 DC n 3 4 DG n 3 5 DC n 3 6 DC n 3 7 DA n 3 8 DA n 3 9 DC n 3 10 DA n 3 11 DT n 3 12 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 191 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PRIM2, PRIM2A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 6 'Homo sapiens' ? 9606 ? 3 1 sample 1 12 'Homo sapiens' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PRI2_HUMAN P49643 ? 1 ;GNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGY SYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQ KYFEMIHNVDDCGFSLNHPNQFFCESQRILN ; 266 2 PDB 5F0Q 5F0Q ? 2 ? 1 3 PDB 5F0Q 5F0Q ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5F0Q A 1 ? 191 ? P49643 266 ? 456 ? 266 456 2 1 5F0Q B 1 ? 191 ? P49643 266 ? 456 ? 266 456 3 2 5F0Q C 1 ? 6 ? 5F0Q 1 ? 6 ? 1 6 4 3 5F0Q D 1 ? 12 ? 5F0Q 1 ? 12 ? 1 12 5 2 5F0Q E 1 ? 6 ? 5F0Q 1 ? 6 ? 1 6 6 3 5F0Q F 1 ? 12 ? 5F0Q 1 ? 12 ? 1 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5F0Q _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.10 _exptl_crystal.description 'needle-like prisms with a square in cross-section' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.18 M lithium sulfate, 50 mM sodium citrate, 2 mM TCEP, 0.1 M sodium malonate, 0.1 M Hepes-NaOH (pH 7.0), 19.7% PEG 8,000 and 0.02 M magnesium chloride ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 31.700 _reflns.entry_id 5F0Q _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31361 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.300 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 31.213 _reflns.pdbx_netI_over_sigmaI 9.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.379 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.068 _reflns.pdbx_Rpim_I_all 0.027 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 165370 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.200 2.240 ? 1.55 ? ? ? 937 ? 58.300 ? ? ? ? 0.379 ? ? ? ? ? ? ? ? 2.700 ? 0.648 ? ? 0.449 0.235 0 1 1 0.745 ? 2.240 2.280 ? ? ? ? ? 1179 ? 72.500 ? ? ? ? 0.387 ? ? ? ? ? ? ? ? 2.900 ? 0.740 ? ? 0.456 0.234 0 2 1 0.740 ? 2.280 2.320 ? ? ? ? ? 1409 ? 87.200 ? ? ? ? 0.386 ? ? ? ? ? ? ? ? 3.100 ? 0.673 ? ? 0.452 0.229 0 3 1 0.760 ? 2.320 2.370 ? ? ? ? ? 1571 ? 96.100 ? ? ? ? 0.420 ? ? ? ? ? ? ? ? 3.700 ? 0.668 ? ? 0.483 0.233 0 4 1 0.814 ? 2.370 2.420 ? ? ? ? ? 1602 ? 98.700 ? ? ? ? 0.387 ? ? ? ? ? ? ? ? 4.300 ? 0.687 ? ? 0.438 0.202 0 5 1 0.886 ? 2.420 2.480 ? ? ? ? ? 1586 ? 99.200 ? ? ? ? 0.349 ? ? ? ? ? ? ? ? 4.500 ? 0.740 ? ? 0.393 0.177 0 6 1 0.911 ? 2.480 2.540 ? ? ? ? ? 1609 ? 98.500 ? ? ? ? 0.308 ? ? ? ? ? ? ? ? 4.400 ? 0.770 ? ? 0.348 0.158 0 7 1 0.923 ? 2.540 2.610 ? ? ? ? ? 1628 ? 99.600 ? ? ? ? 0.278 ? ? ? ? ? ? ? ? 4.800 ? 0.808 ? ? 0.311 0.136 0 8 1 0.940 ? 2.610 2.690 ? ? ? ? ? 1634 ? 99.700 ? ? ? ? 0.263 ? ? ? ? ? ? ? ? 5.400 ? 0.865 ? ? 0.291 0.121 0 9 1 0.960 ? 2.690 2.770 ? ? ? ? ? 1614 ? 99.600 ? ? ? ? 0.219 ? ? ? ? ? ? ? ? 5.600 ? 0.981 ? ? 0.241 0.099 0 10 1 0.976 ? 2.770 2.870 ? ? ? ? ? 1622 ? 99.600 ? ? ? ? 0.184 ? ? ? ? ? ? ? ? 5.700 ? 1.070 ? ? 0.202 0.083 0 11 1 0.978 ? 2.870 2.990 ? ? ? ? ? 1641 ? 99.800 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 5.800 ? 1.219 ? ? 0.167 0.068 0 12 1 0.985 ? 2.990 3.120 ? ? ? ? ? 1646 ? 99.800 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 6.000 ? 1.443 ? ? 0.135 0.054 0 13 1 0.989 ? 3.120 3.290 ? ? ? ? ? 1622 ? 99.500 ? ? ? ? 0.096 ? ? ? ? ? ? ? ? 5.800 ? 1.781 ? ? 0.105 0.042 0 14 1 0.992 ? 3.290 3.490 ? ? ? ? ? 1652 ? 99.600 ? ? ? ? 0.081 ? ? ? ? ? ? ? ? 6.100 ? 2.014 ? ? 0.088 0.034 0 15 1 0.995 ? 3.490 3.760 ? ? ? ? ? 1643 ? 99.900 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 6.700 ? 2.041 ? ? 0.076 0.029 0 16 1 0.996 ? 3.760 4.140 ? ? ? ? ? 1651 ? 99.900 ? ? ? ? 0.063 ? ? ? ? ? ? ? ? 6.600 ? 2.120 ? ? 0.068 0.026 0 17 1 0.995 ? 4.140 4.740 ? ? ? ? ? 1664 ? 99.900 ? ? ? ? 0.052 ? ? ? ? ? ? ? ? 6.300 ? 2.004 ? ? 0.057 0.023 0 18 1 0.996 ? 4.740 5.970 ? ? ? ? ? 1687 ? 99.600 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 6.400 ? 1.669 ? ? 0.049 0.019 0 19 1 0.998 ? 5.970 50.000 ? ? ? ? ? 1764 ? 99.400 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 6.200 ? 1.597 ? ? 0.044 0.017 0 20 1 0.995 ? # _refine.aniso_B[1][1] 8.8100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 7.2800 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -16.0900 _refine.B_iso_max 127.110 _refine.B_iso_mean 63.8000 _refine.B_iso_min 30.150 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5F0Q _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2100 _refine.ls_d_res_low 49.4800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30821 _refine.ls_number_reflns_R_free 1532 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.3000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2580 _refine.ls_R_factor_R_free_error 0.0070 _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2230 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_bsol 56.4797 _refine.solvent_model_param_ksol 0.3515 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF 92148.0000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF 0.0000 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4RR2 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5F0Q _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free 0.430 _refine_analyze.Luzzati_coordinate_error_obs 0.360 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_sigma_a_free 0.620 _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs 0.550 _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.2100 _refine_hist.d_res_low 49.4800 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 65 _refine_hist.number_atoms_total 3839 _refine_hist.pdbx_number_residues_total 406 _refine_hist.pdbx_B_iso_mean_ligand 53.39 _refine_hist.pdbx_B_iso_mean_solvent 53.80 _refine_hist.pdbx_number_atoms_protein 3035 _refine_hist.pdbx_number_atoms_nucleic_acid 721 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? ? ? c_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.400 ? ? ? c_angle_deg ? ? 'X-RAY DIFFRACTION' ? 19.900 ? ? ? c_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 1.800 ? ? ? c_improper_angle_d ? ? 'X-RAY DIFFRACTION' ? 3.190 1.500 ? ? c_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 4.780 2.000 ? ? c_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.930 2.000 ? ? c_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.550 2.500 ? ? c_scangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.2000 _refine_ls_shell.d_res_low 2.3400 _refine_ls_shell.number_reflns_all 3424 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 178 _refine_ls_shell.number_reflns_R_work 3246 _refine_ls_shell.percent_reflns_obs 62.4000 _refine_ls_shell.percent_reflns_R_free 5.2000 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4550 _refine_ls_shell.R_factor_R_free_error 0.0340 _refine_ls_shell.R_factor_R_work 0.4090 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 sf4.par sf4.top 'X-RAY DIFFRACTION' 5 water_rep.param water.top # _struct.entry_id 5F0Q _struct.title 'Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5F0Q _struct_keywords.text ;Tranferase-DNA-RNA complex, DNA primase, large subunit, iron-sulfur cluster, RNA, DNA, primer, template, triphosphate, initiation site ; _struct_keywords.pdbx_keywords Tranferase/DNA/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 6 ? P N N 6 ? # _struct_biol.details 'trimer according to electrophoresis' _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? ASP A 9 ? SER A 272 ASP A 274 5 ? 3 HELX_P HELX_P2 AA2 GLN A 10 ? SER A 18 ? GLN A 275 SER A 283 1 ? 9 HELX_P HELX_P3 AA3 PRO A 20 ? HIS A 34 ? PRO A 285 HIS A 299 1 ? 15 HELX_P HELX_P4 AA4 ARG A 37 ? GLY A 52 ? ARG A 302 GLY A 317 1 ? 16 HELX_P HELX_P5 AA5 THR A 54 ? LYS A 68 ? THR A 319 LYS A 333 1 ? 15 HELX_P HELX_P6 AA6 ASP A 72 ? GLY A 79 ? ASP A 337 GLY A 344 1 ? 8 HELX_P HELX_P7 AA7 GLY A 79 ? PHE A 88 ? GLY A 344 PHE A 353 1 ? 10 HELX_P HELX_P8 AA8 SER A 101 ? SER A 108 ? SER A 366 SER A 373 1 ? 8 HELX_P HELX_P9 AA9 CYS A 119 ? SER A 124 ? CYS A 384 SER A 389 1 ? 6 HELX_P HELX_P10 AB1 ASP A 125 ? TYR A 136 ? ASP A 390 TYR A 401 1 ? 12 HELX_P HELX_P11 AB2 SER A 139 ? GLY A 152 ? SER A 404 GLY A 417 1 ? 14 HELX_P HELX_P12 AB3 HIS A 154 ? HIS A 167 ? HIS A 419 HIS A 432 1 ? 14 HELX_P HELX_P13 AB4 HIS A 178 ? ASN A 191 ? HIS A 443 ASN A 456 1 ? 14 HELX_P HELX_P14 AB5 SER B 7 ? ASP B 9 ? SER B 272 ASP B 274 5 ? 3 HELX_P HELX_P15 AB6 GLN B 10 ? SER B 18 ? GLN B 275 SER B 283 1 ? 9 HELX_P HELX_P16 AB7 PRO B 20 ? HIS B 34 ? PRO B 285 HIS B 299 1 ? 15 HELX_P HELX_P17 AB8 ARG B 37 ? ILE B 51 ? ARG B 302 ILE B 316 1 ? 15 HELX_P HELX_P18 AB9 THR B 54 ? LYS B 68 ? THR B 319 LYS B 333 1 ? 15 HELX_P HELX_P19 AC1 ASP B 72 ? GLY B 79 ? ASP B 337 GLY B 344 1 ? 8 HELX_P HELX_P20 AC2 GLY B 79 ? PHE B 88 ? GLY B 344 PHE B 353 1 ? 10 HELX_P HELX_P21 AC3 SER B 101 ? SER B 108 ? SER B 366 SER B 373 1 ? 8 HELX_P HELX_P22 AC4 CYS B 119 ? SER B 124 ? CYS B 384 SER B 389 1 ? 6 HELX_P HELX_P23 AC5 ASP B 125 ? TYR B 136 ? ASP B 390 TYR B 401 1 ? 12 HELX_P HELX_P24 AC6 SER B 139 ? GLY B 152 ? SER B 404 GLY B 417 1 ? 14 HELX_P HELX_P25 AC7 HIS B 154 ? HIS B 167 ? HIS B 419 HIS B 432 1 ? 14 HELX_P HELX_P26 AC8 HIS B 178 ? LEU B 190 ? HIS B 443 LEU B 455 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C GTP 1 "O3'" ? ? ? 1_555 C G 2 P ? ? C GTP 1 C G 2 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? E GTP 1 "O3'" ? ? ? 1_555 E G 2 P ? ? E GTP 1 E G 2 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A CYS 22 SG ? ? ? 1_555 G SF4 . FE4 ? ? A CYS 287 A SF4 501 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc2 metalc ? ? A CYS 102 SG ? ? ? 1_555 G SF4 . FE1 ? ? A CYS 367 A SF4 501 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc3 metalc ? ? A CYS 119 SG ? ? ? 1_555 G SF4 . FE2 ? ? A CYS 384 A SF4 501 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc4 metalc ? ? A CYS 159 SG ? ? ? 1_555 G SF4 . FE3 ? ? A CYS 424 A SF4 501 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc5 metalc ? ? B CYS 22 SG ? ? ? 1_555 H SF4 . FE4 ? ? B CYS 287 B SF4 501 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc6 metalc ? ? B CYS 102 SG ? ? ? 1_555 H SF4 . FE1 ? ? B CYS 367 B SF4 501 1_555 ? ? ? ? ? ? ? 2.211 ? ? metalc7 metalc ? ? B CYS 119 SG ? ? ? 1_555 H SF4 . FE2 ? ? B CYS 384 B SF4 501 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc8 metalc ? ? B CYS 159 SG ? ? ? 1_555 H SF4 . FE3 ? ? B CYS 424 B SF4 501 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc9 metalc ? ? C GTP 1 O2G ? ? ? 1_555 I MG . MG ? ? C GTP 1 C MG 101 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc10 metalc ? ? C GTP 1 O1B ? ? ? 1_555 I MG . MG ? ? C GTP 1 C MG 101 1_555 ? ? ? ? ? ? ? 2.876 ? ? metalc11 metalc ? ? C GTP 1 O2A ? ? ? 1_555 I MG . MG ? ? C GTP 1 C MG 101 1_555 ? ? ? ? ? ? ? 2.776 ? ? metalc12 metalc ? ? E GTP 1 O1G ? ? ? 1_555 J MG . MG ? ? E GTP 1 E MG 101 1_555 ? ? ? ? ? ? ? 1.854 ? ? metalc13 metalc ? ? E GTP 1 O1B ? ? ? 1_555 J MG . MG ? ? E GTP 1 E MG 101 1_555 ? ? ? ? ? ? ? 2.467 ? ? metalc14 metalc ? ? E GTP 1 O1A ? ? ? 1_555 J MG . MG ? ? E GTP 1 E MG 101 1_555 ? ? ? ? ? ? ? 2.205 ? ? hydrog1 hydrog ? ? C GTP 1 N1 ? ? ? 1_555 D DC 6 N3 ? ? C GTP 1 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C GTP 1 N2 ? ? ? 1_555 D DC 6 O2 ? ? C GTP 1 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C GTP 1 O6 ? ? ? 1_555 D DC 6 N4 ? ? C GTP 1 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C G 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C G 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C G 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C C 3 N3 ? ? ? 1_555 D DG 4 N1 ? ? C C 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C C 3 N4 ? ? ? 1_555 D DG 4 O6 ? ? C C 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C C 3 O2 ? ? ? 1_555 D DG 4 N2 ? ? C C 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C G 4 N1 ? ? ? 1_555 D DC 3 N3 ? ? C G 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C G 4 N2 ? ? ? 1_555 D DC 3 O2 ? ? C G 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C G 4 O6 ? ? ? 1_555 D DC 3 N4 ? ? C G 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C G 5 N1 ? ? ? 1_555 D DC 2 N3 ? ? C G 5 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C G 5 N2 ? ? ? 1_555 D DC 2 O2 ? ? C G 5 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C G 5 O6 ? ? ? 1_555 D DC 2 N4 ? ? C G 5 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C C 6 N3 ? ? ? 1_555 D DG 1 N1 ? ? C C 6 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C C 6 N4 ? ? ? 1_555 D DG 1 O6 ? ? C C 6 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C C 6 O2 ? ? ? 1_555 D DG 1 N2 ? ? C C 6 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? E GTP 1 N1 ? ? ? 1_555 F DC 6 N3 ? ? E GTP 1 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? E GTP 1 N2 ? ? ? 1_555 F DC 6 O2 ? ? E GTP 1 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? E GTP 1 O6 ? ? ? 1_555 F DC 6 N4 ? ? E GTP 1 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? E GTP 1 N1 ? ? ? 1_555 F DA 7 N1 ? ? E GTP 1 F DA 7 1_555 ? ? ? ? ? ? 'GTP-DA MISPAIR' ? ? ? hydrog23 hydrog ? ? E G 2 N1 ? ? ? 1_555 F DC 5 N3 ? ? E G 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E G 2 N2 ? ? ? 1_555 F DC 5 O2 ? ? E G 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? E G 2 O6 ? ? ? 1_555 F DC 5 N4 ? ? E G 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E C 3 N3 ? ? ? 1_555 F DG 4 N1 ? ? E C 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E C 3 N4 ? ? ? 1_555 F DG 4 O6 ? ? E C 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E C 3 O2 ? ? ? 1_555 F DG 4 N2 ? ? E C 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E G 4 N1 ? ? ? 1_555 F DC 3 N3 ? ? E G 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E G 4 N2 ? ? ? 1_555 F DC 3 O2 ? ? E G 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E G 4 O6 ? ? ? 1_555 F DC 3 N4 ? ? E G 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E G 5 N1 ? ? ? 1_555 F DC 2 N3 ? ? E G 5 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E G 5 N2 ? ? ? 1_555 F DC 2 O2 ? ? E G 5 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E G 5 O6 ? ? ? 1_555 F DC 2 N4 ? ? E G 5 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E C 6 N3 ? ? ? 1_555 F DG 1 N1 ? ? E C 6 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E C 6 N4 ? ? ? 1_555 F DG 1 O6 ? ? E C 6 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E C 6 O2 ? ? ? 1_555 F DG 1 N2 ? ? E C 6 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 501 ? 4 'binding site for residue SF4 A 501' AC2 Software B SF4 501 ? 5 'binding site for residue SF4 B 501' AC3 Software C MG 101 ? 1 'binding site for residue MG C 101' AC4 Software E MG 101 ? 1 'binding site for residue MG E 101' AC5 Software E GTP 1 ? 10 'binding site for Di-nucleotide GTP E 1 and G E 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 22 ? CYS A 287 . ? 1_555 ? 2 AC1 4 CYS A 102 ? CYS A 367 . ? 1_555 ? 3 AC1 4 CYS A 119 ? CYS A 384 . ? 1_555 ? 4 AC1 4 CYS A 159 ? CYS A 424 . ? 1_555 ? 5 AC2 5 PRO B 20 ? PRO B 285 . ? 1_555 ? 6 AC2 5 CYS B 22 ? CYS B 287 . ? 1_555 ? 7 AC2 5 CYS B 102 ? CYS B 367 . ? 1_555 ? 8 AC2 5 CYS B 119 ? CYS B 384 . ? 1_555 ? 9 AC2 5 CYS B 159 ? CYS B 424 . ? 1_555 ? 10 AC3 1 GTP C 1 ? GTP C 1 . ? 1_555 ? 11 AC4 1 GTP E 1 ? GTP E 1 . ? 1_555 ? 12 AC5 10 HIS B 35 ? HIS B 300 . ? 1_555 ? 13 AC5 10 ARG B 37 ? ARG B 302 . ? 1_555 ? 14 AC5 10 HIS B 38 ? HIS B 303 . ? 1_555 ? 15 AC5 10 ARG B 41 ? ARG B 306 . ? 1_555 ? 16 AC5 10 TYR B 80 ? TYR B 345 . ? 1_555 ? 17 AC5 10 C E 3 ? C E 3 . ? 1_555 ? 18 AC5 10 MG J . ? MG E 101 . ? 1_555 ? 19 AC5 10 DC F 5 ? DC F 5 . ? 1_555 ? 20 AC5 10 DC F 6 ? DC F 6 . ? 1_555 ? 21 AC5 10 DA F 7 ? DA F 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 5F0Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 5F0Q _atom_sites.fract_transf_matrix[1][1] 0.008163 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007936 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011913 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 266 ? ? ? A . n A 1 2 ASN 2 267 ? ? ? A . n A 1 3 VAL 3 268 ? ? ? A . n A 1 4 GLY 4 269 ? ? ? A . n A 1 5 LYS 5 270 270 LYS LYS A . n A 1 6 ILE 6 271 271 ILE ILE A . n A 1 7 SER 7 272 272 SER SER A . n A 1 8 LEU 8 273 273 LEU LEU A . n A 1 9 ASP 9 274 274 ASP ASP A . n A 1 10 GLN 10 275 275 GLN GLN A . n A 1 11 ILE 11 276 276 ILE ILE A . n A 1 12 ASP 12 277 277 ASP ASP A . n A 1 13 LEU 13 278 278 LEU LEU A . n A 1 14 LEU 14 279 279 LEU LEU A . n A 1 15 SER 15 280 280 SER SER A . n A 1 16 THR 16 281 281 THR THR A . n A 1 17 LYS 17 282 282 LYS LYS A . n A 1 18 SER 18 283 283 SER SER A . n A 1 19 PHE 19 284 284 PHE PHE A . n A 1 20 PRO 20 285 285 PRO PRO A . n A 1 21 PRO 21 286 286 PRO PRO A . n A 1 22 CYS 22 287 287 CYS CYS A . n A 1 23 MET 23 288 288 MET MET A . n A 1 24 ARG 24 289 289 ARG ARG A . n A 1 25 GLN 25 290 290 GLN GLN A . n A 1 26 LEU 26 291 291 LEU LEU A . n A 1 27 HIS 27 292 292 HIS HIS A . n A 1 28 LYS 28 293 293 LYS LYS A . n A 1 29 ALA 29 294 294 ALA ALA A . n A 1 30 LEU 30 295 295 LEU LEU A . n A 1 31 ARG 31 296 296 ARG ARG A . n A 1 32 GLU 32 297 297 GLU GLU A . n A 1 33 ASN 33 298 298 ASN ASN A . n A 1 34 HIS 34 299 299 HIS HIS A . n A 1 35 HIS 35 300 300 HIS HIS A . n A 1 36 LEU 36 301 301 LEU LEU A . n A 1 37 ARG 37 302 302 ARG ARG A . n A 1 38 HIS 38 303 303 HIS HIS A . n A 1 39 GLY 39 304 304 GLY GLY A . n A 1 40 GLY 40 305 305 GLY GLY A . n A 1 41 ARG 41 306 306 ARG ARG A . n A 1 42 MET 42 307 307 MET MET A . n A 1 43 GLN 43 308 308 GLN GLN A . n A 1 44 TYR 44 309 309 TYR TYR A . n A 1 45 GLY 45 310 310 GLY GLY A . n A 1 46 LEU 46 311 311 LEU LEU A . n A 1 47 PHE 47 312 312 PHE PHE A . n A 1 48 LEU 48 313 313 LEU LEU A . n A 1 49 LYS 49 314 314 LYS LYS A . n A 1 50 GLY 50 315 315 GLY GLY A . n A 1 51 ILE 51 316 316 ILE ILE A . n A 1 52 GLY 52 317 317 GLY GLY A . n A 1 53 LEU 53 318 318 LEU LEU A . n A 1 54 THR 54 319 319 THR THR A . n A 1 55 LEU 55 320 320 LEU LEU A . n A 1 56 GLU 56 321 321 GLU GLU A . n A 1 57 GLN 57 322 322 GLN GLN A . n A 1 58 ALA 58 323 323 ALA ALA A . n A 1 59 LEU 59 324 324 LEU LEU A . n A 1 60 GLN 60 325 325 GLN GLN A . n A 1 61 PHE 61 326 326 PHE PHE A . n A 1 62 TRP 62 327 327 TRP TRP A . n A 1 63 LYS 63 328 328 LYS LYS A . n A 1 64 GLN 64 329 329 GLN GLN A . n A 1 65 GLU 65 330 330 GLU GLU A . n A 1 66 PHE 66 331 331 PHE PHE A . n A 1 67 ILE 67 332 332 ILE ILE A . n A 1 68 LYS 68 333 333 LYS LYS A . n A 1 69 GLY 69 334 334 GLY GLY A . n A 1 70 LYS 70 335 335 LYS LYS A . n A 1 71 MET 71 336 336 MET MET A . n A 1 72 ASP 72 337 337 ASP ASP A . n A 1 73 PRO 73 338 338 PRO PRO A . n A 1 74 ASP 74 339 339 ASP ASP A . n A 1 75 LYS 75 340 340 LYS LYS A . n A 1 76 PHE 76 341 341 PHE PHE A . n A 1 77 ASP 77 342 342 ASP ASP A . n A 1 78 LYS 78 343 343 LYS LYS A . n A 1 79 GLY 79 344 344 GLY GLY A . n A 1 80 TYR 80 345 345 TYR TYR A . n A 1 81 SER 81 346 346 SER SER A . n A 1 82 TYR 82 347 347 TYR TYR A . n A 1 83 ASN 83 348 348 ASN ASN A . n A 1 84 ILE 84 349 349 ILE ILE A . n A 1 85 ARG 85 350 350 ARG ARG A . n A 1 86 HIS 86 351 351 HIS HIS A . n A 1 87 SER 87 352 352 SER SER A . n A 1 88 PHE 88 353 353 PHE PHE A . n A 1 89 GLY 89 354 354 GLY GLY A . n A 1 90 LYS 90 355 355 LYS LYS A . n A 1 91 GLU 91 356 356 GLU GLU A . n A 1 92 GLY 92 357 357 GLY GLY A . n A 1 93 LYS 93 358 358 LYS LYS A . n A 1 94 ARG 94 359 359 ARG ARG A . n A 1 95 THR 95 360 360 THR THR A . n A 1 96 ASP 96 361 361 ASP ASP A . n A 1 97 TYR 97 362 362 TYR TYR A . n A 1 98 THR 98 363 363 THR THR A . n A 1 99 PRO 99 364 364 PRO PRO A . n A 1 100 PHE 100 365 365 PHE PHE A . n A 1 101 SER 101 366 366 SER SER A . n A 1 102 CYS 102 367 367 CYS CYS A . n A 1 103 LEU 103 368 368 LEU LEU A . n A 1 104 LYS 104 369 369 LYS LYS A . n A 1 105 ILE 105 370 370 ILE ILE A . n A 1 106 ILE 106 371 371 ILE ILE A . n A 1 107 LEU 107 372 372 LEU LEU A . n A 1 108 SER 108 373 373 SER SER A . n A 1 109 ASN 109 374 374 ASN ASN A . n A 1 110 PRO 110 375 375 PRO PRO A . n A 1 111 PRO 111 376 376 PRO PRO A . n A 1 112 SER 112 377 377 SER SER A . n A 1 113 GLN 113 378 378 GLN GLN A . n A 1 114 GLY 114 379 379 GLY GLY A . n A 1 115 ASP 115 380 380 ASP ASP A . n A 1 116 TYR 116 381 381 TYR TYR A . n A 1 117 HIS 117 382 382 HIS HIS A . n A 1 118 GLY 118 383 383 GLY GLY A . n A 1 119 CYS 119 384 384 CYS CYS A . n A 1 120 PRO 120 385 385 PRO PRO A . n A 1 121 PHE 121 386 386 PHE PHE A . n A 1 122 ARG 122 387 387 ARG ARG A . n A 1 123 HIS 123 388 388 HIS HIS A . n A 1 124 SER 124 389 389 SER SER A . n A 1 125 ASP 125 390 390 ASP ASP A . n A 1 126 PRO 126 391 391 PRO PRO A . n A 1 127 GLU 127 392 392 GLU GLU A . n A 1 128 LEU 128 393 393 LEU LEU A . n A 1 129 LEU 129 394 394 LEU LEU A . n A 1 130 LYS 130 395 395 LYS LYS A . n A 1 131 GLN 131 396 396 GLN GLN A . n A 1 132 LYS 132 397 397 LYS LYS A . n A 1 133 LEU 133 398 398 LEU LEU A . n A 1 134 GLN 134 399 399 GLN GLN A . n A 1 135 SER 135 400 400 SER SER A . n A 1 136 TYR 136 401 401 TYR TYR A . n A 1 137 LYS 137 402 402 LYS LYS A . n A 1 138 ILE 138 403 403 ILE ILE A . n A 1 139 SER 139 404 404 SER SER A . n A 1 140 PRO 140 405 405 PRO PRO A . n A 1 141 GLY 141 406 406 GLY GLY A . n A 1 142 GLY 142 407 407 GLY GLY A . n A 1 143 ILE 143 408 408 ILE ILE A . n A 1 144 SER 144 409 409 SER SER A . n A 1 145 GLN 145 410 410 GLN GLN A . n A 1 146 ILE 146 411 411 ILE ILE A . n A 1 147 LEU 147 412 412 LEU LEU A . n A 1 148 ASP 148 413 413 ASP ASP A . n A 1 149 LEU 149 414 414 LEU LEU A . n A 1 150 VAL 150 415 415 VAL VAL A . n A 1 151 LYS 151 416 416 LYS LYS A . n A 1 152 GLY 152 417 417 GLY GLY A . n A 1 153 THR 153 418 418 THR THR A . n A 1 154 HIS 154 419 419 HIS HIS A . n A 1 155 TYR 155 420 420 TYR TYR A . n A 1 156 GLN 156 421 421 GLN GLN A . n A 1 157 VAL 157 422 422 VAL VAL A . n A 1 158 ALA 158 423 423 ALA ALA A . n A 1 159 CYS 159 424 424 CYS CYS A . n A 1 160 GLN 160 425 425 GLN GLN A . n A 1 161 LYS 161 426 426 LYS LYS A . n A 1 162 TYR 162 427 427 TYR TYR A . n A 1 163 PHE 163 428 428 PHE PHE A . n A 1 164 GLU 164 429 429 GLU GLU A . n A 1 165 MET 165 430 430 MET MET A . n A 1 166 ILE 166 431 431 ILE ILE A . n A 1 167 HIS 167 432 432 HIS HIS A . n A 1 168 ASN 168 433 433 ASN ASN A . n A 1 169 VAL 169 434 434 VAL VAL A . n A 1 170 ASP 170 435 435 ASP ASP A . n A 1 171 ASP 171 436 436 ASP ASP A . n A 1 172 CYS 172 437 437 CYS CYS A . n A 1 173 GLY 173 438 438 GLY GLY A . n A 1 174 PHE 174 439 439 PHE PHE A . n A 1 175 SER 175 440 440 SER SER A . n A 1 176 LEU 176 441 441 LEU LEU A . n A 1 177 ASN 177 442 442 ASN ASN A . n A 1 178 HIS 178 443 443 HIS HIS A . n A 1 179 PRO 179 444 444 PRO PRO A . n A 1 180 ASN 180 445 445 ASN ASN A . n A 1 181 GLN 181 446 446 GLN GLN A . n A 1 182 PHE 182 447 447 PHE PHE A . n A 1 183 PHE 183 448 448 PHE PHE A . n A 1 184 CYS 184 449 449 CYS CYS A . n A 1 185 GLU 185 450 450 GLU GLU A . n A 1 186 SER 186 451 451 SER SER A . n A 1 187 GLN 187 452 452 GLN GLN A . n A 1 188 ARG 188 453 453 ARG ARG A . n A 1 189 ILE 189 454 454 ILE ILE A . n A 1 190 LEU 190 455 455 LEU LEU A . n A 1 191 ASN 191 456 456 ASN ASN A . n B 1 1 GLY 1 266 ? ? ? B . n B 1 2 ASN 2 267 ? ? ? B . n B 1 3 VAL 3 268 ? ? ? B . n B 1 4 GLY 4 269 ? ? ? B . n B 1 5 LYS 5 270 ? ? ? B . n B 1 6 ILE 6 271 271 ILE ILE B . n B 1 7 SER 7 272 272 SER SER B . n B 1 8 LEU 8 273 273 LEU LEU B . n B 1 9 ASP 9 274 274 ASP ASP B . n B 1 10 GLN 10 275 275 GLN GLN B . n B 1 11 ILE 11 276 276 ILE ILE B . n B 1 12 ASP 12 277 277 ASP ASP B . n B 1 13 LEU 13 278 278 LEU LEU B . n B 1 14 LEU 14 279 279 LEU LEU B . n B 1 15 SER 15 280 280 SER SER B . n B 1 16 THR 16 281 281 THR THR B . n B 1 17 LYS 17 282 282 LYS LYS B . n B 1 18 SER 18 283 283 SER SER B . n B 1 19 PHE 19 284 284 PHE PHE B . n B 1 20 PRO 20 285 285 PRO PRO B . n B 1 21 PRO 21 286 286 PRO PRO B . n B 1 22 CYS 22 287 287 CYS CYS B . n B 1 23 MET 23 288 288 MET MET B . n B 1 24 ARG 24 289 289 ARG ARG B . n B 1 25 GLN 25 290 290 GLN GLN B . n B 1 26 LEU 26 291 291 LEU LEU B . n B 1 27 HIS 27 292 292 HIS HIS B . n B 1 28 LYS 28 293 293 LYS LYS B . n B 1 29 ALA 29 294 294 ALA ALA B . n B 1 30 LEU 30 295 295 LEU LEU B . n B 1 31 ARG 31 296 296 ARG ARG B . n B 1 32 GLU 32 297 297 GLU GLU B . n B 1 33 ASN 33 298 298 ASN ASN B . n B 1 34 HIS 34 299 299 HIS HIS B . n B 1 35 HIS 35 300 300 HIS HIS B . n B 1 36 LEU 36 301 301 LEU LEU B . n B 1 37 ARG 37 302 302 ARG ARG B . n B 1 38 HIS 38 303 303 HIS HIS B . n B 1 39 GLY 39 304 304 GLY GLY B . n B 1 40 GLY 40 305 305 GLY GLY B . n B 1 41 ARG 41 306 306 ARG ARG B . n B 1 42 MET 42 307 307 MET MET B . n B 1 43 GLN 43 308 308 GLN GLN B . n B 1 44 TYR 44 309 309 TYR TYR B . n B 1 45 GLY 45 310 310 GLY GLY B . n B 1 46 LEU 46 311 311 LEU LEU B . n B 1 47 PHE 47 312 312 PHE PHE B . n B 1 48 LEU 48 313 313 LEU LEU B . n B 1 49 LYS 49 314 314 LYS LYS B . n B 1 50 GLY 50 315 315 GLY GLY B . n B 1 51 ILE 51 316 316 ILE ILE B . n B 1 52 GLY 52 317 317 GLY GLY B . n B 1 53 LEU 53 318 318 LEU LEU B . n B 1 54 THR 54 319 319 THR THR B . n B 1 55 LEU 55 320 320 LEU LEU B . n B 1 56 GLU 56 321 321 GLU GLU B . n B 1 57 GLN 57 322 322 GLN GLN B . n B 1 58 ALA 58 323 323 ALA ALA B . n B 1 59 LEU 59 324 324 LEU LEU B . n B 1 60 GLN 60 325 325 GLN GLN B . n B 1 61 PHE 61 326 326 PHE PHE B . n B 1 62 TRP 62 327 327 TRP TRP B . n B 1 63 LYS 63 328 328 LYS LYS B . n B 1 64 GLN 64 329 329 GLN GLN B . n B 1 65 GLU 65 330 330 GLU GLU B . n B 1 66 PHE 66 331 331 PHE PHE B . n B 1 67 ILE 67 332 332 ILE ILE B . n B 1 68 LYS 68 333 333 LYS LYS B . n B 1 69 GLY 69 334 334 GLY GLY B . n B 1 70 LYS 70 335 335 LYS LYS B . n B 1 71 MET 71 336 336 MET MET B . n B 1 72 ASP 72 337 337 ASP ASP B . n B 1 73 PRO 73 338 338 PRO PRO B . n B 1 74 ASP 74 339 339 ASP ASP B . n B 1 75 LYS 75 340 340 LYS LYS B . n B 1 76 PHE 76 341 341 PHE PHE B . n B 1 77 ASP 77 342 342 ASP ASP B . n B 1 78 LYS 78 343 343 LYS LYS B . n B 1 79 GLY 79 344 344 GLY GLY B . n B 1 80 TYR 80 345 345 TYR TYR B . n B 1 81 SER 81 346 346 SER SER B . n B 1 82 TYR 82 347 347 TYR TYR B . n B 1 83 ASN 83 348 348 ASN ASN B . n B 1 84 ILE 84 349 349 ILE ILE B . n B 1 85 ARG 85 350 350 ARG ARG B . n B 1 86 HIS 86 351 351 HIS HIS B . n B 1 87 SER 87 352 352 SER SER B . n B 1 88 PHE 88 353 353 PHE PHE B . n B 1 89 GLY 89 354 354 GLY GLY B . n B 1 90 LYS 90 355 355 LYS LYS B . n B 1 91 GLU 91 356 356 GLU GLU B . n B 1 92 GLY 92 357 357 GLY GLY B . n B 1 93 LYS 93 358 358 LYS LYS B . n B 1 94 ARG 94 359 359 ARG ARG B . n B 1 95 THR 95 360 360 THR THR B . n B 1 96 ASP 96 361 361 ASP ASP B . n B 1 97 TYR 97 362 362 TYR TYR B . n B 1 98 THR 98 363 363 THR THR B . n B 1 99 PRO 99 364 364 PRO PRO B . n B 1 100 PHE 100 365 365 PHE PHE B . n B 1 101 SER 101 366 366 SER SER B . n B 1 102 CYS 102 367 367 CYS CYS B . n B 1 103 LEU 103 368 368 LEU LEU B . n B 1 104 LYS 104 369 369 LYS LYS B . n B 1 105 ILE 105 370 370 ILE ILE B . n B 1 106 ILE 106 371 371 ILE ILE B . n B 1 107 LEU 107 372 372 LEU LEU B . n B 1 108 SER 108 373 373 SER SER B . n B 1 109 ASN 109 374 374 ASN ASN B . n B 1 110 PRO 110 375 375 PRO PRO B . n B 1 111 PRO 111 376 376 PRO PRO B . n B 1 112 SER 112 377 377 SER SER B . n B 1 113 GLN 113 378 378 GLN GLN B . n B 1 114 GLY 114 379 379 GLY GLY B . n B 1 115 ASP 115 380 380 ASP ASP B . n B 1 116 TYR 116 381 381 TYR TYR B . n B 1 117 HIS 117 382 382 HIS HIS B . n B 1 118 GLY 118 383 383 GLY GLY B . n B 1 119 CYS 119 384 384 CYS CYS B . n B 1 120 PRO 120 385 385 PRO PRO B . n B 1 121 PHE 121 386 386 PHE PHE B . n B 1 122 ARG 122 387 387 ARG ARG B . n B 1 123 HIS 123 388 388 HIS HIS B . n B 1 124 SER 124 389 389 SER SER B . n B 1 125 ASP 125 390 390 ASP ASP B . n B 1 126 PRO 126 391 391 PRO PRO B . n B 1 127 GLU 127 392 392 GLU GLU B . n B 1 128 LEU 128 393 393 LEU LEU B . n B 1 129 LEU 129 394 394 LEU LEU B . n B 1 130 LYS 130 395 395 LYS LYS B . n B 1 131 GLN 131 396 396 GLN GLN B . n B 1 132 LYS 132 397 397 LYS LYS B . n B 1 133 LEU 133 398 398 LEU LEU B . n B 1 134 GLN 134 399 399 GLN GLN B . n B 1 135 SER 135 400 400 SER SER B . n B 1 136 TYR 136 401 401 TYR TYR B . n B 1 137 LYS 137 402 402 LYS LYS B . n B 1 138 ILE 138 403 403 ILE ILE B . n B 1 139 SER 139 404 404 SER SER B . n B 1 140 PRO 140 405 405 PRO PRO B . n B 1 141 GLY 141 406 406 GLY GLY B . n B 1 142 GLY 142 407 407 GLY GLY B . n B 1 143 ILE 143 408 408 ILE ILE B . n B 1 144 SER 144 409 409 SER SER B . n B 1 145 GLN 145 410 410 GLN GLN B . n B 1 146 ILE 146 411 411 ILE ILE B . n B 1 147 LEU 147 412 412 LEU LEU B . n B 1 148 ASP 148 413 413 ASP ASP B . n B 1 149 LEU 149 414 414 LEU LEU B . n B 1 150 VAL 150 415 415 VAL VAL B . n B 1 151 LYS 151 416 416 LYS LYS B . n B 1 152 GLY 152 417 417 GLY GLY B . n B 1 153 THR 153 418 418 THR THR B . n B 1 154 HIS 154 419 419 HIS HIS B . n B 1 155 TYR 155 420 420 TYR TYR B . n B 1 156 GLN 156 421 421 GLN GLN B . n B 1 157 VAL 157 422 422 VAL VAL B . n B 1 158 ALA 158 423 423 ALA ALA B . n B 1 159 CYS 159 424 424 CYS CYS B . n B 1 160 GLN 160 425 425 GLN GLN B . n B 1 161 LYS 161 426 426 LYS LYS B . n B 1 162 TYR 162 427 427 TYR TYR B . n B 1 163 PHE 163 428 428 PHE PHE B . n B 1 164 GLU 164 429 429 GLU GLU B . n B 1 165 MET 165 430 430 MET MET B . n B 1 166 ILE 166 431 431 ILE ILE B . n B 1 167 HIS 167 432 432 HIS HIS B . n B 1 168 ASN 168 433 433 ASN ASN B . n B 1 169 VAL 169 434 434 VAL VAL B . n B 1 170 ASP 170 435 435 ASP ASP B . n B 1 171 ASP 171 436 436 ASP ASP B . n B 1 172 CYS 172 437 437 CYS CYS B . n B 1 173 GLY 173 438 438 GLY GLY B . n B 1 174 PHE 174 439 439 PHE PHE B . n B 1 175 SER 175 440 440 SER SER B . n B 1 176 LEU 176 441 441 LEU LEU B . n B 1 177 ASN 177 442 442 ASN ASN B . n B 1 178 HIS 178 443 443 HIS HIS B . n B 1 179 PRO 179 444 444 PRO PRO B . n B 1 180 ASN 180 445 445 ASN ASN B . n B 1 181 GLN 181 446 446 GLN GLN B . n B 1 182 PHE 182 447 447 PHE PHE B . n B 1 183 PHE 183 448 448 PHE PHE B . n B 1 184 CYS 184 449 449 CYS CYS B . n B 1 185 GLU 185 450 450 GLU GLU B . n B 1 186 SER 186 451 451 SER SER B . n B 1 187 GLN 187 452 452 GLN GLN B . n B 1 188 ARG 188 453 453 ARG ARG B . n B 1 189 ILE 189 454 454 ILE ILE B . n B 1 190 LEU 190 455 455 LEU LEU B . n B 1 191 ASN 191 456 ? ? ? B . n C 2 1 GTP 1 1 1 GTP GUA C . n C 2 2 G 2 2 2 G GUA C . n C 2 3 C 3 3 3 C CYT C . n C 2 4 G 4 4 4 G GUA C . n C 2 5 G 5 5 5 G GUA C . n C 2 6 C 6 6 6 C CYT C . n D 3 1 DG 1 1 1 DG GUA D . n D 3 2 DC 2 2 2 DC CYT D . n D 3 3 DC 3 3 3 DC CYT D . n D 3 4 DG 4 4 4 DG GUA D . n D 3 5 DC 5 5 5 DC CYT D . n D 3 6 DC 6 6 6 DC CYT D . n D 3 7 DA 7 7 7 DA ADE D . n D 3 8 DA 8 8 8 DA ADE D . n D 3 9 DC 9 9 9 DC CYT D . n D 3 10 DA 10 10 10 DA ADE D . n D 3 11 DT 11 11 11 DT THY D . n D 3 12 DA 12 12 12 DA ADE D . n E 2 1 GTP 1 1 1 GTP GUA E . n E 2 2 G 2 2 2 G GUA E . n E 2 3 C 3 3 3 C CYT E . n E 2 4 G 4 4 4 G GUA E . n E 2 5 G 5 5 5 G GUA E . n E 2 6 C 6 6 6 C CYT E . n F 3 1 DG 1 1 1 DG GUA F . n F 3 2 DC 2 2 2 DC CYT F . n F 3 3 DC 3 3 3 DC CYT F . n F 3 4 DG 4 4 4 DG GUA F . n F 3 5 DC 5 5 5 DC CYT F . n F 3 6 DC 6 6 6 DC CYT F . n F 3 7 DA 7 7 7 DA ADE F . n F 3 8 DA 8 8 8 DA ADE F . n F 3 9 DC 9 9 9 DC CYT F . n F 3 10 DA 10 10 10 DA ADE F . n F 3 11 DT 11 11 ? ? ? F . n F 3 12 DA 12 12 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 SF4 1 501 1 SF4 SF4 A . H 4 SF4 1 501 1 SF4 SF4 B . I 5 MG 1 101 1 MG MG C . J 5 MG 1 101 1 MG MG E . K 6 HOH 1 601 40 HOH HOH A . K 6 HOH 2 602 51 HOH HOH A . K 6 HOH 3 603 57 HOH HOH A . K 6 HOH 4 604 2 HOH HOH A . K 6 HOH 5 605 58 HOH HOH A . K 6 HOH 6 606 22 HOH HOH A . K 6 HOH 7 607 14 HOH HOH A . K 6 HOH 8 608 60 HOH HOH A . K 6 HOH 9 609 8 HOH HOH A . K 6 HOH 10 610 9 HOH HOH A . K 6 HOH 11 611 4 HOH HOH A . K 6 HOH 12 612 35 HOH HOH A . K 6 HOH 13 613 49 HOH HOH A . K 6 HOH 14 614 18 HOH HOH A . K 6 HOH 15 615 26 HOH HOH A . K 6 HOH 16 616 7 HOH HOH A . K 6 HOH 17 617 47 HOH HOH A . K 6 HOH 18 618 33 HOH HOH A . K 6 HOH 19 619 6 HOH HOH A . K 6 HOH 20 620 16 HOH HOH A . K 6 HOH 21 621 44 HOH HOH A . K 6 HOH 22 622 45 HOH HOH A . K 6 HOH 23 623 55 HOH HOH A . K 6 HOH 24 624 64 HOH HOH A . L 6 HOH 1 601 24 HOH HOH B . L 6 HOH 2 602 27 HOH HOH B . L 6 HOH 3 603 37 HOH HOH B . L 6 HOH 4 604 48 HOH HOH B . L 6 HOH 5 605 59 HOH HOH B . L 6 HOH 6 606 53 HOH HOH B . L 6 HOH 7 607 38 HOH HOH B . L 6 HOH 8 608 36 HOH HOH B . L 6 HOH 9 609 15 HOH HOH B . L 6 HOH 10 610 5 HOH HOH B . L 6 HOH 11 611 56 HOH HOH B . L 6 HOH 12 612 25 HOH HOH B . L 6 HOH 13 613 50 HOH HOH B . L 6 HOH 14 614 13 HOH HOH B . L 6 HOH 15 615 52 HOH HOH B . L 6 HOH 16 616 17 HOH HOH B . L 6 HOH 17 617 65 HOH HOH B . L 6 HOH 18 618 61 HOH HOH B . L 6 HOH 19 619 62 HOH HOH B . M 6 HOH 1 201 20 HOH HOH C . M 6 HOH 2 202 28 HOH HOH C . M 6 HOH 3 203 23 HOH HOH C . M 6 HOH 4 204 19 HOH HOH C . M 6 HOH 5 205 10 HOH HOH C . M 6 HOH 6 206 32 HOH HOH C . M 6 HOH 7 207 31 HOH HOH C . N 6 HOH 1 101 43 HOH HOH D . N 6 HOH 2 102 42 HOH HOH D . N 6 HOH 3 103 11 HOH HOH D . N 6 HOH 4 104 46 HOH HOH D . N 6 HOH 5 105 12 HOH HOH D . N 6 HOH 6 106 21 HOH HOH D . N 6 HOH 7 107 39 HOH HOH D . N 6 HOH 8 108 63 HOH HOH D . O 6 HOH 1 201 1 HOH HOH E . O 6 HOH 2 202 34 HOH HOH E . O 6 HOH 3 203 3 HOH HOH E . O 6 HOH 4 204 54 HOH HOH E . P 6 HOH 1 101 30 HOH HOH F . P 6 HOH 2 102 29 HOH HOH F . P 6 HOH 3 103 41 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G,I,K,M,N 2 1 B,E,F,H,J,L,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3360 ? 1 MORE -46 ? 1 'SSA (A^2)' 11940 ? 2 'ABSA (A^2)' 2970 ? 2 MORE -45 ? 2 'SSA (A^2)' 11580 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S1 ? G SF4 . ? A SF4 501 ? 1_555 116.6 ? 2 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S2 ? G SF4 . ? A SF4 501 ? 1_555 131.2 ? 3 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S2 ? G SF4 . ? A SF4 501 ? 1_555 84.1 ? 4 SG ? A CYS 22 ? A CYS 287 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 131.1 ? 5 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 90.2 ? 6 S2 ? G SF4 . ? A SF4 501 ? 1_555 FE4 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 89.0 ? 7 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S2 ? G SF4 . ? A SF4 501 ? 1_555 115.7 ? 8 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 125.7 ? 9 S2 ? G SF4 . ? A SF4 501 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 85.2 ? 10 SG ? A CYS 102 ? A CYS 367 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 129.0 ? 11 S2 ? G SF4 . ? A SF4 501 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 91.5 ? 12 S3 ? G SF4 . ? A SF4 501 ? 1_555 FE1 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 97.2 ? 13 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S1 ? G SF4 . ? A SF4 501 ? 1_555 127.7 ? 14 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 121.8 ? 15 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S3 ? G SF4 . ? A SF4 501 ? 1_555 86.6 ? 16 SG ? A CYS 119 ? A CYS 384 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 121.2 ? 17 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 92.8 ? 18 S3 ? G SF4 . ? A SF4 501 ? 1_555 FE2 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 97.8 ? 19 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S1 ? G SF4 . ? A SF4 501 ? 1_555 129.6 ? 20 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S2 ? G SF4 . ? A SF4 501 ? 1_555 128.6 ? 21 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S2 ? G SF4 . ? A SF4 501 ? 1_555 82.2 ? 22 SG ? A CYS 159 ? A CYS 424 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 118.6 ? 23 S1 ? G SF4 . ? A SF4 501 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 94.2 ? 24 S2 ? G SF4 . ? A SF4 501 ? 1_555 FE3 ? G SF4 . ? A SF4 501 ? 1_555 S4 ? G SF4 . ? A SF4 501 ? 1_555 92.8 ? 25 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S1 ? H SF4 . ? B SF4 501 ? 1_555 119.4 ? 26 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S2 ? H SF4 . ? B SF4 501 ? 1_555 129.8 ? 27 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S2 ? H SF4 . ? B SF4 501 ? 1_555 85.0 ? 28 SG ? B CYS 22 ? B CYS 287 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 130.3 ? 29 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 90.6 ? 30 S2 ? H SF4 . ? B SF4 501 ? 1_555 FE4 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 88.2 ? 31 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S2 ? H SF4 . ? B SF4 501 ? 1_555 116.4 ? 32 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 131.1 ? 33 S2 ? H SF4 . ? B SF4 501 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 84.8 ? 34 SG ? B CYS 102 ? B CYS 367 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 124.2 ? 35 S2 ? H SF4 . ? B SF4 501 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 91.1 ? 36 S3 ? H SF4 . ? B SF4 501 ? 1_555 FE1 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 96.7 ? 37 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S1 ? H SF4 . ? B SF4 501 ? 1_555 121.1 ? 38 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 120.2 ? 39 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S3 ? H SF4 . ? B SF4 501 ? 1_555 87.2 ? 40 SG ? B CYS 119 ? B CYS 384 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 127.8 ? 41 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 93.7 ? 42 S3 ? H SF4 . ? B SF4 501 ? 1_555 FE2 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 97.0 ? 43 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S1 ? H SF4 . ? B SF4 501 ? 1_555 134.1 ? 44 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S2 ? H SF4 . ? B SF4 501 ? 1_555 123.5 ? 45 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S2 ? H SF4 . ? B SF4 501 ? 1_555 83.1 ? 46 SG ? B CYS 159 ? B CYS 424 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 117.7 ? 47 S1 ? H SF4 . ? B SF4 501 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 94.5 ? 48 S2 ? H SF4 . ? B SF4 501 ? 1_555 FE3 ? H SF4 . ? B SF4 501 ? 1_555 S4 ? H SF4 . ? B SF4 501 ? 1_555 92.7 ? 49 O2G ? C GTP 1 ? C GTP 1 ? 1_555 MG ? I MG . ? C MG 101 ? 1_555 O1B ? C GTP 1 ? C GTP 1 ? 1_555 61.7 ? 50 O2G ? C GTP 1 ? C GTP 1 ? 1_555 MG ? I MG . ? C MG 101 ? 1_555 O2A ? C GTP 1 ? C GTP 1 ? 1_555 71.2 ? 51 O1B ? C GTP 1 ? C GTP 1 ? 1_555 MG ? I MG . ? C MG 101 ? 1_555 O2A ? C GTP 1 ? C GTP 1 ? 1_555 49.3 ? 52 O1G ? E GTP 1 ? E GTP 1 ? 1_555 MG ? J MG . ? E MG 101 ? 1_555 O1B ? E GTP 1 ? E GTP 1 ? 1_555 82.9 ? 53 O1G ? E GTP 1 ? E GTP 1 ? 1_555 MG ? J MG . ? E MG 101 ? 1_555 O1A ? E GTP 1 ? E GTP 1 ? 1_555 93.9 ? 54 O1B ? E GTP 1 ? E GTP 1 ? 1_555 MG ? J MG . ? E MG 101 ? 1_555 O1A ? E GTP 1 ? E GTP 1 ? 1_555 65.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-23 2 'Structure model' 1 1 2016-03-30 3 'Structure model' 1 2 2016-06-01 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2017-11-01 6 'Structure model' 1 5 2019-12-04 7 'Structure model' 1 6 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Author supporting evidence' 8 7 'Structure model' 'Data collection' 9 7 'Structure model' 'Database references' 10 7 'Structure model' 'Derived calculations' 11 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_struct_assembly_auth_evidence 5 6 'Structure model' pdbx_audit_support 6 7 'Structure model' chem_comp_atom 7 7 'Structure model' chem_comp_bond 8 7 'Structure model' database_2 9 7 'Structure model' pdbx_initial_refinement_model 10 7 'Structure model' struct_conn 11 7 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 6 'Structure model' '_pdbx_audit_support.funding_organization' 5 7 'Structure model' '_database_2.pdbx_DOI' 6 7 'Structure model' '_database_2.pdbx_database_accession' 7 7 'Structure model' '_struct_conn.conn_type_id' 8 7 'Structure model' '_struct_conn.id' 9 7 'Structure model' '_struct_conn.pdbx_dist_value' 10 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 7 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 7 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 7 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 7 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 7 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? 1.1 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 111.55 108.30 3.25 0.30 N 2 1 N1 D DT 11 ? ? "C1'" D DT 11 ? ? "C2'" D DT 11 ? ? 124.33 114.30 10.03 1.40 N 3 1 "O4'" F DC 3 ? ? "C1'" F DC 3 ? ? N1 F DC 3 ? ? 110.65 108.30 2.35 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 274 ? ? -72.78 26.41 2 1 LYS A 343 ? ? -55.89 -72.12 3 1 ARG A 359 ? ? 64.72 70.93 4 1 ASN A 374 ? ? 28.18 62.63 5 1 HIS A 382 ? ? -68.81 -178.00 6 1 PRO A 391 ? ? -29.37 -42.13 7 1 PRO A 405 ? ? -45.09 -18.01 8 1 ASN A 442 ? ? -153.73 16.57 9 1 LYS B 335 ? ? 58.29 12.06 10 1 HIS B 419 ? ? -101.07 49.98 11 1 ASN B 442 ? ? -155.17 13.62 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC D 3 ? ? 0.065 'SIDE CHAIN' 2 1 DA D 8 ? ? 0.050 'SIDE CHAIN' 3 1 DC F 3 ? ? 0.061 'SIDE CHAIN' 4 1 DA F 8 ? ? 0.067 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 266 ? A GLY 1 2 1 Y 1 A ASN 267 ? A ASN 2 3 1 Y 1 A VAL 268 ? A VAL 3 4 1 Y 1 A GLY 269 ? A GLY 4 5 1 Y 1 B GLY 266 ? B GLY 1 6 1 Y 1 B ASN 267 ? B ASN 2 7 1 Y 1 B VAL 268 ? B VAL 3 8 1 Y 1 B GLY 269 ? B GLY 4 9 1 Y 1 B LYS 270 ? B LYS 5 10 1 Y 1 B ASN 456 ? B ASN 191 11 1 Y 1 F DT 11 ? F DT 11 12 1 Y 1 F DA 12 ? F DA 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C OP3 O N N 74 C P P N N 75 C OP1 O N N 76 C OP2 O N N 77 C "O5'" O N N 78 C "C5'" C N N 79 C "C4'" C N R 80 C "O4'" O N N 81 C "C3'" C N S 82 C "O3'" O N N 83 C "C2'" C N R 84 C "O2'" O N N 85 C "C1'" C N R 86 C N1 N N N 87 C C2 C N N 88 C O2 O N N 89 C N3 N N N 90 C C4 C N N 91 C N4 N N N 92 C C5 C N N 93 C C6 C N N 94 C HOP3 H N N 95 C HOP2 H N N 96 C "H5'" H N N 97 C "H5''" H N N 98 C "H4'" H N N 99 C "H3'" H N N 100 C "HO3'" H N N 101 C "H2'" H N N 102 C "HO2'" H N N 103 C "H1'" H N N 104 C H41 H N N 105 C H42 H N N 106 C H5 H N N 107 C H6 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 DA OP3 O N N 123 DA P P N N 124 DA OP1 O N N 125 DA OP2 O N N 126 DA "O5'" O N N 127 DA "C5'" C N N 128 DA "C4'" C N R 129 DA "O4'" O N N 130 DA "C3'" C N S 131 DA "O3'" O N N 132 DA "C2'" C N N 133 DA "C1'" C N R 134 DA N9 N Y N 135 DA C8 C Y N 136 DA N7 N Y N 137 DA C5 C Y N 138 DA C6 C Y N 139 DA N6 N N N 140 DA N1 N Y N 141 DA C2 C Y N 142 DA N3 N Y N 143 DA C4 C Y N 144 DA HOP3 H N N 145 DA HOP2 H N N 146 DA "H5'" H N N 147 DA "H5''" H N N 148 DA "H4'" H N N 149 DA "H3'" H N N 150 DA "HO3'" H N N 151 DA "H2'" H N N 152 DA "H2''" H N N 153 DA "H1'" H N N 154 DA H8 H N N 155 DA H61 H N N 156 DA H62 H N N 157 DA H2 H N N 158 DC OP3 O N N 159 DC P P N N 160 DC OP1 O N N 161 DC OP2 O N N 162 DC "O5'" O N N 163 DC "C5'" C N N 164 DC "C4'" C N R 165 DC "O4'" O N N 166 DC "C3'" C N S 167 DC "O3'" O N N 168 DC "C2'" C N N 169 DC "C1'" C N R 170 DC N1 N N N 171 DC C2 C N N 172 DC O2 O N N 173 DC N3 N N N 174 DC C4 C N N 175 DC N4 N N N 176 DC C5 C N N 177 DC C6 C N N 178 DC HOP3 H N N 179 DC HOP2 H N N 180 DC "H5'" H N N 181 DC "H5''" H N N 182 DC "H4'" H N N 183 DC "H3'" H N N 184 DC "HO3'" H N N 185 DC "H2'" H N N 186 DC "H2''" H N N 187 DC "H1'" H N N 188 DC H41 H N N 189 DC H42 H N N 190 DC H5 H N N 191 DC H6 H N N 192 DG OP3 O N N 193 DG P P N N 194 DG OP1 O N N 195 DG OP2 O N N 196 DG "O5'" O N N 197 DG "C5'" C N N 198 DG "C4'" C N R 199 DG "O4'" O N N 200 DG "C3'" C N S 201 DG "O3'" O N N 202 DG "C2'" C N N 203 DG "C1'" C N R 204 DG N9 N Y N 205 DG C8 C Y N 206 DG N7 N Y N 207 DG C5 C Y N 208 DG C6 C N N 209 DG O6 O N N 210 DG N1 N N N 211 DG C2 C N N 212 DG N2 N N N 213 DG N3 N N N 214 DG C4 C Y N 215 DG HOP3 H N N 216 DG HOP2 H N N 217 DG "H5'" H N N 218 DG "H5''" H N N 219 DG "H4'" H N N 220 DG "H3'" H N N 221 DG "HO3'" H N N 222 DG "H2'" H N N 223 DG "H2''" H N N 224 DG "H1'" H N N 225 DG H8 H N N 226 DG H1 H N N 227 DG H21 H N N 228 DG H22 H N N 229 DT OP3 O N N 230 DT P P N N 231 DT OP1 O N N 232 DT OP2 O N N 233 DT "O5'" O N N 234 DT "C5'" C N N 235 DT "C4'" C N R 236 DT "O4'" O N N 237 DT "C3'" C N S 238 DT "O3'" O N N 239 DT "C2'" C N N 240 DT "C1'" C N R 241 DT N1 N N N 242 DT C2 C N N 243 DT O2 O N N 244 DT N3 N N N 245 DT C4 C N N 246 DT O4 O N N 247 DT C5 C N N 248 DT C7 C N N 249 DT C6 C N N 250 DT HOP3 H N N 251 DT HOP2 H N N 252 DT "H5'" H N N 253 DT "H5''" H N N 254 DT "H4'" H N N 255 DT "H3'" H N N 256 DT "HO3'" H N N 257 DT "H2'" H N N 258 DT "H2''" H N N 259 DT "H1'" H N N 260 DT H3 H N N 261 DT H71 H N N 262 DT H72 H N N 263 DT H73 H N N 264 DT H6 H N N 265 G OP3 O N N 266 G P P N N 267 G OP1 O N N 268 G OP2 O N N 269 G "O5'" O N N 270 G "C5'" C N N 271 G "C4'" C N R 272 G "O4'" O N N 273 G "C3'" C N S 274 G "O3'" O N N 275 G "C2'" C N R 276 G "O2'" O N N 277 G "C1'" C N R 278 G N9 N Y N 279 G C8 C Y N 280 G N7 N Y N 281 G C5 C Y N 282 G C6 C N N 283 G O6 O N N 284 G N1 N N N 285 G C2 C N N 286 G N2 N N N 287 G N3 N N N 288 G C4 C Y N 289 G HOP3 H N N 290 G HOP2 H N N 291 G "H5'" H N N 292 G "H5''" H N N 293 G "H4'" H N N 294 G "H3'" H N N 295 G "HO3'" H N N 296 G "H2'" H N N 297 G "HO2'" H N N 298 G "H1'" H N N 299 G H8 H N N 300 G H1 H N N 301 G H21 H N N 302 G H22 H N N 303 GLN N N N N 304 GLN CA C N S 305 GLN C C N N 306 GLN O O N N 307 GLN CB C N N 308 GLN CG C N N 309 GLN CD C N N 310 GLN OE1 O N N 311 GLN NE2 N N N 312 GLN OXT O N N 313 GLN H H N N 314 GLN H2 H N N 315 GLN HA H N N 316 GLN HB2 H N N 317 GLN HB3 H N N 318 GLN HG2 H N N 319 GLN HG3 H N N 320 GLN HE21 H N N 321 GLN HE22 H N N 322 GLN HXT H N N 323 GLU N N N N 324 GLU CA C N S 325 GLU C C N N 326 GLU O O N N 327 GLU CB C N N 328 GLU CG C N N 329 GLU CD C N N 330 GLU OE1 O N N 331 GLU OE2 O N N 332 GLU OXT O N N 333 GLU H H N N 334 GLU H2 H N N 335 GLU HA H N N 336 GLU HB2 H N N 337 GLU HB3 H N N 338 GLU HG2 H N N 339 GLU HG3 H N N 340 GLU HE2 H N N 341 GLU HXT H N N 342 GLY N N N N 343 GLY CA C N N 344 GLY C C N N 345 GLY O O N N 346 GLY OXT O N N 347 GLY H H N N 348 GLY H2 H N N 349 GLY HA2 H N N 350 GLY HA3 H N N 351 GLY HXT H N N 352 GTP PG P N N 353 GTP O1G O N N 354 GTP O2G O N N 355 GTP O3G O N N 356 GTP O3B O N N 357 GTP PB P N N 358 GTP O1B O N N 359 GTP O2B O N N 360 GTP O3A O N N 361 GTP PA P N N 362 GTP O1A O N N 363 GTP O2A O N N 364 GTP "O5'" O N N 365 GTP "C5'" C N N 366 GTP "C4'" C N R 367 GTP "O4'" O N N 368 GTP "C3'" C N S 369 GTP "O3'" O N N 370 GTP "C2'" C N R 371 GTP "O2'" O N N 372 GTP "C1'" C N R 373 GTP N9 N Y N 374 GTP C8 C Y N 375 GTP N7 N Y N 376 GTP C5 C Y N 377 GTP C6 C N N 378 GTP O6 O N N 379 GTP N1 N N N 380 GTP C2 C N N 381 GTP N2 N N N 382 GTP N3 N N N 383 GTP C4 C Y N 384 GTP HOG2 H N N 385 GTP HOG3 H N N 386 GTP HOB2 H N N 387 GTP HOA2 H N N 388 GTP "H5'" H N N 389 GTP "H5''" H N N 390 GTP "H4'" H N N 391 GTP "H3'" H N N 392 GTP "HO3'" H N N 393 GTP "H2'" H N N 394 GTP "HO2'" H N N 395 GTP "H1'" H N N 396 GTP H8 H N N 397 GTP HN1 H N N 398 GTP HN21 H N N 399 GTP HN22 H N N 400 HIS N N N N 401 HIS CA C N S 402 HIS C C N N 403 HIS O O N N 404 HIS CB C N N 405 HIS CG C Y N 406 HIS ND1 N Y N 407 HIS CD2 C Y N 408 HIS CE1 C Y N 409 HIS NE2 N Y N 410 HIS OXT O N N 411 HIS H H N N 412 HIS H2 H N N 413 HIS HA H N N 414 HIS HB2 H N N 415 HIS HB3 H N N 416 HIS HD1 H N N 417 HIS HD2 H N N 418 HIS HE1 H N N 419 HIS HE2 H N N 420 HIS HXT H N N 421 HOH O O N N 422 HOH H1 H N N 423 HOH H2 H N N 424 ILE N N N N 425 ILE CA C N S 426 ILE C C N N 427 ILE O O N N 428 ILE CB C N S 429 ILE CG1 C N N 430 ILE CG2 C N N 431 ILE CD1 C N N 432 ILE OXT O N N 433 ILE H H N N 434 ILE H2 H N N 435 ILE HA H N N 436 ILE HB H N N 437 ILE HG12 H N N 438 ILE HG13 H N N 439 ILE HG21 H N N 440 ILE HG22 H N N 441 ILE HG23 H N N 442 ILE HD11 H N N 443 ILE HD12 H N N 444 ILE HD13 H N N 445 ILE HXT H N N 446 LEU N N N N 447 LEU CA C N S 448 LEU C C N N 449 LEU O O N N 450 LEU CB C N N 451 LEU CG C N N 452 LEU CD1 C N N 453 LEU CD2 C N N 454 LEU OXT O N N 455 LEU H H N N 456 LEU H2 H N N 457 LEU HA H N N 458 LEU HB2 H N N 459 LEU HB3 H N N 460 LEU HG H N N 461 LEU HD11 H N N 462 LEU HD12 H N N 463 LEU HD13 H N N 464 LEU HD21 H N N 465 LEU HD22 H N N 466 LEU HD23 H N N 467 LEU HXT H N N 468 LYS N N N N 469 LYS CA C N S 470 LYS C C N N 471 LYS O O N N 472 LYS CB C N N 473 LYS CG C N N 474 LYS CD C N N 475 LYS CE C N N 476 LYS NZ N N N 477 LYS OXT O N N 478 LYS H H N N 479 LYS H2 H N N 480 LYS HA H N N 481 LYS HB2 H N N 482 LYS HB3 H N N 483 LYS HG2 H N N 484 LYS HG3 H N N 485 LYS HD2 H N N 486 LYS HD3 H N N 487 LYS HE2 H N N 488 LYS HE3 H N N 489 LYS HZ1 H N N 490 LYS HZ2 H N N 491 LYS HZ3 H N N 492 LYS HXT H N N 493 MET N N N N 494 MET CA C N S 495 MET C C N N 496 MET O O N N 497 MET CB C N N 498 MET CG C N N 499 MET SD S N N 500 MET CE C N N 501 MET OXT O N N 502 MET H H N N 503 MET H2 H N N 504 MET HA H N N 505 MET HB2 H N N 506 MET HB3 H N N 507 MET HG2 H N N 508 MET HG3 H N N 509 MET HE1 H N N 510 MET HE2 H N N 511 MET HE3 H N N 512 MET HXT H N N 513 MG MG MG N N 514 PHE N N N N 515 PHE CA C N S 516 PHE C C N N 517 PHE O O N N 518 PHE CB C N N 519 PHE CG C Y N 520 PHE CD1 C Y N 521 PHE CD2 C Y N 522 PHE CE1 C Y N 523 PHE CE2 C Y N 524 PHE CZ C Y N 525 PHE OXT O N N 526 PHE H H N N 527 PHE H2 H N N 528 PHE HA H N N 529 PHE HB2 H N N 530 PHE HB3 H N N 531 PHE HD1 H N N 532 PHE HD2 H N N 533 PHE HE1 H N N 534 PHE HE2 H N N 535 PHE HZ H N N 536 PHE HXT H N N 537 PRO N N N N 538 PRO CA C N S 539 PRO C C N N 540 PRO O O N N 541 PRO CB C N N 542 PRO CG C N N 543 PRO CD C N N 544 PRO OXT O N N 545 PRO H H N N 546 PRO HA H N N 547 PRO HB2 H N N 548 PRO HB3 H N N 549 PRO HG2 H N N 550 PRO HG3 H N N 551 PRO HD2 H N N 552 PRO HD3 H N N 553 PRO HXT H N N 554 SER N N N N 555 SER CA C N S 556 SER C C N N 557 SER O O N N 558 SER CB C N N 559 SER OG O N N 560 SER OXT O N N 561 SER H H N N 562 SER H2 H N N 563 SER HA H N N 564 SER HB2 H N N 565 SER HB3 H N N 566 SER HG H N N 567 SER HXT H N N 568 SF4 FE1 FE N N 569 SF4 FE2 FE N N 570 SF4 FE3 FE N N 571 SF4 FE4 FE N N 572 SF4 S1 S N N 573 SF4 S2 S N N 574 SF4 S3 S N N 575 SF4 S4 S N N 576 THR N N N N 577 THR CA C N S 578 THR C C N N 579 THR O O N N 580 THR CB C N R 581 THR OG1 O N N 582 THR CG2 C N N 583 THR OXT O N N 584 THR H H N N 585 THR H2 H N N 586 THR HA H N N 587 THR HB H N N 588 THR HG1 H N N 589 THR HG21 H N N 590 THR HG22 H N N 591 THR HG23 H N N 592 THR HXT H N N 593 TRP N N N N 594 TRP CA C N S 595 TRP C C N N 596 TRP O O N N 597 TRP CB C N N 598 TRP CG C Y N 599 TRP CD1 C Y N 600 TRP CD2 C Y N 601 TRP NE1 N Y N 602 TRP CE2 C Y N 603 TRP CE3 C Y N 604 TRP CZ2 C Y N 605 TRP CZ3 C Y N 606 TRP CH2 C Y N 607 TRP OXT O N N 608 TRP H H N N 609 TRP H2 H N N 610 TRP HA H N N 611 TRP HB2 H N N 612 TRP HB3 H N N 613 TRP HD1 H N N 614 TRP HE1 H N N 615 TRP HE3 H N N 616 TRP HZ2 H N N 617 TRP HZ3 H N N 618 TRP HH2 H N N 619 TRP HXT H N N 620 TYR N N N N 621 TYR CA C N S 622 TYR C C N N 623 TYR O O N N 624 TYR CB C N N 625 TYR CG C Y N 626 TYR CD1 C Y N 627 TYR CD2 C Y N 628 TYR CE1 C Y N 629 TYR CE2 C Y N 630 TYR CZ C Y N 631 TYR OH O N N 632 TYR OXT O N N 633 TYR H H N N 634 TYR H2 H N N 635 TYR HA H N N 636 TYR HB2 H N N 637 TYR HB3 H N N 638 TYR HD1 H N N 639 TYR HD2 H N N 640 TYR HE1 H N N 641 TYR HE2 H N N 642 TYR HH H N N 643 TYR HXT H N N 644 VAL N N N N 645 VAL CA C N S 646 VAL C C N N 647 VAL O O N N 648 VAL CB C N N 649 VAL CG1 C N N 650 VAL CG2 C N N 651 VAL OXT O N N 652 VAL H H N N 653 VAL H2 H N N 654 VAL HA H N N 655 VAL HB H N N 656 VAL HG11 H N N 657 VAL HG12 H N N 658 VAL HG13 H N N 659 VAL HG21 H N N 660 VAL HG22 H N N 661 VAL HG23 H N N 662 VAL HXT H N N 663 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C OP3 P sing N N 70 C OP3 HOP3 sing N N 71 C P OP1 doub N N 72 C P OP2 sing N N 73 C P "O5'" sing N N 74 C OP2 HOP2 sing N N 75 C "O5'" "C5'" sing N N 76 C "C5'" "C4'" sing N N 77 C "C5'" "H5'" sing N N 78 C "C5'" "H5''" sing N N 79 C "C4'" "O4'" sing N N 80 C "C4'" "C3'" sing N N 81 C "C4'" "H4'" sing N N 82 C "O4'" "C1'" sing N N 83 C "C3'" "O3'" sing N N 84 C "C3'" "C2'" sing N N 85 C "C3'" "H3'" sing N N 86 C "O3'" "HO3'" sing N N 87 C "C2'" "O2'" sing N N 88 C "C2'" "C1'" sing N N 89 C "C2'" "H2'" sing N N 90 C "O2'" "HO2'" sing N N 91 C "C1'" N1 sing N N 92 C "C1'" "H1'" sing N N 93 C N1 C2 sing N N 94 C N1 C6 sing N N 95 C C2 O2 doub N N 96 C C2 N3 sing N N 97 C N3 C4 doub N N 98 C C4 N4 sing N N 99 C C4 C5 sing N N 100 C N4 H41 sing N N 101 C N4 H42 sing N N 102 C C5 C6 doub N N 103 C C5 H5 sing N N 104 C C6 H6 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 DA OP3 P sing N N 119 DA OP3 HOP3 sing N N 120 DA P OP1 doub N N 121 DA P OP2 sing N N 122 DA P "O5'" sing N N 123 DA OP2 HOP2 sing N N 124 DA "O5'" "C5'" sing N N 125 DA "C5'" "C4'" sing N N 126 DA "C5'" "H5'" sing N N 127 DA "C5'" "H5''" sing N N 128 DA "C4'" "O4'" sing N N 129 DA "C4'" "C3'" sing N N 130 DA "C4'" "H4'" sing N N 131 DA "O4'" "C1'" sing N N 132 DA "C3'" "O3'" sing N N 133 DA "C3'" "C2'" sing N N 134 DA "C3'" "H3'" sing N N 135 DA "O3'" "HO3'" sing N N 136 DA "C2'" "C1'" sing N N 137 DA "C2'" "H2'" sing N N 138 DA "C2'" "H2''" sing N N 139 DA "C1'" N9 sing N N 140 DA "C1'" "H1'" sing N N 141 DA N9 C8 sing Y N 142 DA N9 C4 sing Y N 143 DA C8 N7 doub Y N 144 DA C8 H8 sing N N 145 DA N7 C5 sing Y N 146 DA C5 C6 sing Y N 147 DA C5 C4 doub Y N 148 DA C6 N6 sing N N 149 DA C6 N1 doub Y N 150 DA N6 H61 sing N N 151 DA N6 H62 sing N N 152 DA N1 C2 sing Y N 153 DA C2 N3 doub Y N 154 DA C2 H2 sing N N 155 DA N3 C4 sing Y N 156 DC OP3 P sing N N 157 DC OP3 HOP3 sing N N 158 DC P OP1 doub N N 159 DC P OP2 sing N N 160 DC P "O5'" sing N N 161 DC OP2 HOP2 sing N N 162 DC "O5'" "C5'" sing N N 163 DC "C5'" "C4'" sing N N 164 DC "C5'" "H5'" sing N N 165 DC "C5'" "H5''" sing N N 166 DC "C4'" "O4'" sing N N 167 DC "C4'" "C3'" sing N N 168 DC "C4'" "H4'" sing N N 169 DC "O4'" "C1'" sing N N 170 DC "C3'" "O3'" sing N N 171 DC "C3'" "C2'" sing N N 172 DC "C3'" "H3'" sing N N 173 DC "O3'" "HO3'" sing N N 174 DC "C2'" "C1'" sing N N 175 DC "C2'" "H2'" sing N N 176 DC "C2'" "H2''" sing N N 177 DC "C1'" N1 sing N N 178 DC "C1'" "H1'" sing N N 179 DC N1 C2 sing N N 180 DC N1 C6 sing N N 181 DC C2 O2 doub N N 182 DC C2 N3 sing N N 183 DC N3 C4 doub N N 184 DC C4 N4 sing N N 185 DC C4 C5 sing N N 186 DC N4 H41 sing N N 187 DC N4 H42 sing N N 188 DC C5 C6 doub N N 189 DC C5 H5 sing N N 190 DC C6 H6 sing N N 191 DG OP3 P sing N N 192 DG OP3 HOP3 sing N N 193 DG P OP1 doub N N 194 DG P OP2 sing N N 195 DG P "O5'" sing N N 196 DG OP2 HOP2 sing N N 197 DG "O5'" "C5'" sing N N 198 DG "C5'" "C4'" sing N N 199 DG "C5'" "H5'" sing N N 200 DG "C5'" "H5''" sing N N 201 DG "C4'" "O4'" sing N N 202 DG "C4'" "C3'" sing N N 203 DG "C4'" "H4'" sing N N 204 DG "O4'" "C1'" sing N N 205 DG "C3'" "O3'" sing N N 206 DG "C3'" "C2'" sing N N 207 DG "C3'" "H3'" sing N N 208 DG "O3'" "HO3'" sing N N 209 DG "C2'" "C1'" sing N N 210 DG "C2'" "H2'" sing N N 211 DG "C2'" "H2''" sing N N 212 DG "C1'" N9 sing N N 213 DG "C1'" "H1'" sing N N 214 DG N9 C8 sing Y N 215 DG N9 C4 sing Y N 216 DG C8 N7 doub Y N 217 DG C8 H8 sing N N 218 DG N7 C5 sing Y N 219 DG C5 C6 sing N N 220 DG C5 C4 doub Y N 221 DG C6 O6 doub N N 222 DG C6 N1 sing N N 223 DG N1 C2 sing N N 224 DG N1 H1 sing N N 225 DG C2 N2 sing N N 226 DG C2 N3 doub N N 227 DG N2 H21 sing N N 228 DG N2 H22 sing N N 229 DG N3 C4 sing N N 230 DT OP3 P sing N N 231 DT OP3 HOP3 sing N N 232 DT P OP1 doub N N 233 DT P OP2 sing N N 234 DT P "O5'" sing N N 235 DT OP2 HOP2 sing N N 236 DT "O5'" "C5'" sing N N 237 DT "C5'" "C4'" sing N N 238 DT "C5'" "H5'" sing N N 239 DT "C5'" "H5''" sing N N 240 DT "C4'" "O4'" sing N N 241 DT "C4'" "C3'" sing N N 242 DT "C4'" "H4'" sing N N 243 DT "O4'" "C1'" sing N N 244 DT "C3'" "O3'" sing N N 245 DT "C3'" "C2'" sing N N 246 DT "C3'" "H3'" sing N N 247 DT "O3'" "HO3'" sing N N 248 DT "C2'" "C1'" sing N N 249 DT "C2'" "H2'" sing N N 250 DT "C2'" "H2''" sing N N 251 DT "C1'" N1 sing N N 252 DT "C1'" "H1'" sing N N 253 DT N1 C2 sing N N 254 DT N1 C6 sing N N 255 DT C2 O2 doub N N 256 DT C2 N3 sing N N 257 DT N3 C4 sing N N 258 DT N3 H3 sing N N 259 DT C4 O4 doub N N 260 DT C4 C5 sing N N 261 DT C5 C7 sing N N 262 DT C5 C6 doub N N 263 DT C7 H71 sing N N 264 DT C7 H72 sing N N 265 DT C7 H73 sing N N 266 DT C6 H6 sing N N 267 G OP3 P sing N N 268 G OP3 HOP3 sing N N 269 G P OP1 doub N N 270 G P OP2 sing N N 271 G P "O5'" sing N N 272 G OP2 HOP2 sing N N 273 G "O5'" "C5'" sing N N 274 G "C5'" "C4'" sing N N 275 G "C5'" "H5'" sing N N 276 G "C5'" "H5''" sing N N 277 G "C4'" "O4'" sing N N 278 G "C4'" "C3'" sing N N 279 G "C4'" "H4'" sing N N 280 G "O4'" "C1'" sing N N 281 G "C3'" "O3'" sing N N 282 G "C3'" "C2'" sing N N 283 G "C3'" "H3'" sing N N 284 G "O3'" "HO3'" sing N N 285 G "C2'" "O2'" sing N N 286 G "C2'" "C1'" sing N N 287 G "C2'" "H2'" sing N N 288 G "O2'" "HO2'" sing N N 289 G "C1'" N9 sing N N 290 G "C1'" "H1'" sing N N 291 G N9 C8 sing Y N 292 G N9 C4 sing Y N 293 G C8 N7 doub Y N 294 G C8 H8 sing N N 295 G N7 C5 sing Y N 296 G C5 C6 sing N N 297 G C5 C4 doub Y N 298 G C6 O6 doub N N 299 G C6 N1 sing N N 300 G N1 C2 sing N N 301 G N1 H1 sing N N 302 G C2 N2 sing N N 303 G C2 N3 doub N N 304 G N2 H21 sing N N 305 G N2 H22 sing N N 306 G N3 C4 sing N N 307 GLN N CA sing N N 308 GLN N H sing N N 309 GLN N H2 sing N N 310 GLN CA C sing N N 311 GLN CA CB sing N N 312 GLN CA HA sing N N 313 GLN C O doub N N 314 GLN C OXT sing N N 315 GLN CB CG sing N N 316 GLN CB HB2 sing N N 317 GLN CB HB3 sing N N 318 GLN CG CD sing N N 319 GLN CG HG2 sing N N 320 GLN CG HG3 sing N N 321 GLN CD OE1 doub N N 322 GLN CD NE2 sing N N 323 GLN NE2 HE21 sing N N 324 GLN NE2 HE22 sing N N 325 GLN OXT HXT sing N N 326 GLU N CA sing N N 327 GLU N H sing N N 328 GLU N H2 sing N N 329 GLU CA C sing N N 330 GLU CA CB sing N N 331 GLU CA HA sing N N 332 GLU C O doub N N 333 GLU C OXT sing N N 334 GLU CB CG sing N N 335 GLU CB HB2 sing N N 336 GLU CB HB3 sing N N 337 GLU CG CD sing N N 338 GLU CG HG2 sing N N 339 GLU CG HG3 sing N N 340 GLU CD OE1 doub N N 341 GLU CD OE2 sing N N 342 GLU OE2 HE2 sing N N 343 GLU OXT HXT sing N N 344 GLY N CA sing N N 345 GLY N H sing N N 346 GLY N H2 sing N N 347 GLY CA C sing N N 348 GLY CA HA2 sing N N 349 GLY CA HA3 sing N N 350 GLY C O doub N N 351 GLY C OXT sing N N 352 GLY OXT HXT sing N N 353 GTP PG O1G doub N N 354 GTP PG O2G sing N N 355 GTP PG O3G sing N N 356 GTP PG O3B sing N N 357 GTP O2G HOG2 sing N N 358 GTP O3G HOG3 sing N N 359 GTP O3B PB sing N N 360 GTP PB O1B doub N N 361 GTP PB O2B sing N N 362 GTP PB O3A sing N N 363 GTP O2B HOB2 sing N N 364 GTP O3A PA sing N N 365 GTP PA O1A doub N N 366 GTP PA O2A sing N N 367 GTP PA "O5'" sing N N 368 GTP O2A HOA2 sing N N 369 GTP "O5'" "C5'" sing N N 370 GTP "C5'" "C4'" sing N N 371 GTP "C5'" "H5'" sing N N 372 GTP "C5'" "H5''" sing N N 373 GTP "C4'" "O4'" sing N N 374 GTP "C4'" "C3'" sing N N 375 GTP "C4'" "H4'" sing N N 376 GTP "O4'" "C1'" sing N N 377 GTP "C3'" "O3'" sing N N 378 GTP "C3'" "C2'" sing N N 379 GTP "C3'" "H3'" sing N N 380 GTP "O3'" "HO3'" sing N N 381 GTP "C2'" "O2'" sing N N 382 GTP "C2'" "C1'" sing N N 383 GTP "C2'" "H2'" sing N N 384 GTP "O2'" "HO2'" sing N N 385 GTP "C1'" N9 sing N N 386 GTP "C1'" "H1'" sing N N 387 GTP N9 C8 sing Y N 388 GTP N9 C4 sing Y N 389 GTP C8 N7 doub Y N 390 GTP C8 H8 sing N N 391 GTP N7 C5 sing Y N 392 GTP C5 C6 sing N N 393 GTP C5 C4 doub Y N 394 GTP C6 O6 doub N N 395 GTP C6 N1 sing N N 396 GTP N1 C2 sing N N 397 GTP N1 HN1 sing N N 398 GTP C2 N2 sing N N 399 GTP C2 N3 doub N N 400 GTP N2 HN21 sing N N 401 GTP N2 HN22 sing N N 402 GTP N3 C4 sing N N 403 HIS N CA sing N N 404 HIS N H sing N N 405 HIS N H2 sing N N 406 HIS CA C sing N N 407 HIS CA CB sing N N 408 HIS CA HA sing N N 409 HIS C O doub N N 410 HIS C OXT sing N N 411 HIS CB CG sing N N 412 HIS CB HB2 sing N N 413 HIS CB HB3 sing N N 414 HIS CG ND1 sing Y N 415 HIS CG CD2 doub Y N 416 HIS ND1 CE1 doub Y N 417 HIS ND1 HD1 sing N N 418 HIS CD2 NE2 sing Y N 419 HIS CD2 HD2 sing N N 420 HIS CE1 NE2 sing Y N 421 HIS CE1 HE1 sing N N 422 HIS NE2 HE2 sing N N 423 HIS OXT HXT sing N N 424 HOH O H1 sing N N 425 HOH O H2 sing N N 426 ILE N CA sing N N 427 ILE N H sing N N 428 ILE N H2 sing N N 429 ILE CA C sing N N 430 ILE CA CB sing N N 431 ILE CA HA sing N N 432 ILE C O doub N N 433 ILE C OXT sing N N 434 ILE CB CG1 sing N N 435 ILE CB CG2 sing N N 436 ILE CB HB sing N N 437 ILE CG1 CD1 sing N N 438 ILE CG1 HG12 sing N N 439 ILE CG1 HG13 sing N N 440 ILE CG2 HG21 sing N N 441 ILE CG2 HG22 sing N N 442 ILE CG2 HG23 sing N N 443 ILE CD1 HD11 sing N N 444 ILE CD1 HD12 sing N N 445 ILE CD1 HD13 sing N N 446 ILE OXT HXT sing N N 447 LEU N CA sing N N 448 LEU N H sing N N 449 LEU N H2 sing N N 450 LEU CA C sing N N 451 LEU CA CB sing N N 452 LEU CA HA sing N N 453 LEU C O doub N N 454 LEU C OXT sing N N 455 LEU CB CG sing N N 456 LEU CB HB2 sing N N 457 LEU CB HB3 sing N N 458 LEU CG CD1 sing N N 459 LEU CG CD2 sing N N 460 LEU CG HG sing N N 461 LEU CD1 HD11 sing N N 462 LEU CD1 HD12 sing N N 463 LEU CD1 HD13 sing N N 464 LEU CD2 HD21 sing N N 465 LEU CD2 HD22 sing N N 466 LEU CD2 HD23 sing N N 467 LEU OXT HXT sing N N 468 LYS N CA sing N N 469 LYS N H sing N N 470 LYS N H2 sing N N 471 LYS CA C sing N N 472 LYS CA CB sing N N 473 LYS CA HA sing N N 474 LYS C O doub N N 475 LYS C OXT sing N N 476 LYS CB CG sing N N 477 LYS CB HB2 sing N N 478 LYS CB HB3 sing N N 479 LYS CG CD sing N N 480 LYS CG HG2 sing N N 481 LYS CG HG3 sing N N 482 LYS CD CE sing N N 483 LYS CD HD2 sing N N 484 LYS CD HD3 sing N N 485 LYS CE NZ sing N N 486 LYS CE HE2 sing N N 487 LYS CE HE3 sing N N 488 LYS NZ HZ1 sing N N 489 LYS NZ HZ2 sing N N 490 LYS NZ HZ3 sing N N 491 LYS OXT HXT sing N N 492 MET N CA sing N N 493 MET N H sing N N 494 MET N H2 sing N N 495 MET CA C sing N N 496 MET CA CB sing N N 497 MET CA HA sing N N 498 MET C O doub N N 499 MET C OXT sing N N 500 MET CB CG sing N N 501 MET CB HB2 sing N N 502 MET CB HB3 sing N N 503 MET CG SD sing N N 504 MET CG HG2 sing N N 505 MET CG HG3 sing N N 506 MET SD CE sing N N 507 MET CE HE1 sing N N 508 MET CE HE2 sing N N 509 MET CE HE3 sing N N 510 MET OXT HXT sing N N 511 PHE N CA sing N N 512 PHE N H sing N N 513 PHE N H2 sing N N 514 PHE CA C sing N N 515 PHE CA CB sing N N 516 PHE CA HA sing N N 517 PHE C O doub N N 518 PHE C OXT sing N N 519 PHE CB CG sing N N 520 PHE CB HB2 sing N N 521 PHE CB HB3 sing N N 522 PHE CG CD1 doub Y N 523 PHE CG CD2 sing Y N 524 PHE CD1 CE1 sing Y N 525 PHE CD1 HD1 sing N N 526 PHE CD2 CE2 doub Y N 527 PHE CD2 HD2 sing N N 528 PHE CE1 CZ doub Y N 529 PHE CE1 HE1 sing N N 530 PHE CE2 CZ sing Y N 531 PHE CE2 HE2 sing N N 532 PHE CZ HZ sing N N 533 PHE OXT HXT sing N N 534 PRO N CA sing N N 535 PRO N CD sing N N 536 PRO N H sing N N 537 PRO CA C sing N N 538 PRO CA CB sing N N 539 PRO CA HA sing N N 540 PRO C O doub N N 541 PRO C OXT sing N N 542 PRO CB CG sing N N 543 PRO CB HB2 sing N N 544 PRO CB HB3 sing N N 545 PRO CG CD sing N N 546 PRO CG HG2 sing N N 547 PRO CG HG3 sing N N 548 PRO CD HD2 sing N N 549 PRO CD HD3 sing N N 550 PRO OXT HXT sing N N 551 SER N CA sing N N 552 SER N H sing N N 553 SER N H2 sing N N 554 SER CA C sing N N 555 SER CA CB sing N N 556 SER CA HA sing N N 557 SER C O doub N N 558 SER C OXT sing N N 559 SER CB OG sing N N 560 SER CB HB2 sing N N 561 SER CB HB3 sing N N 562 SER OG HG sing N N 563 SER OXT HXT sing N N 564 SF4 FE1 S2 sing N N 565 SF4 FE1 S3 sing N N 566 SF4 FE1 S4 sing N N 567 SF4 FE2 S1 sing N N 568 SF4 FE2 S3 sing N N 569 SF4 FE2 S4 sing N N 570 SF4 FE3 S1 sing N N 571 SF4 FE3 S2 sing N N 572 SF4 FE3 S4 sing N N 573 SF4 FE4 S1 sing N N 574 SF4 FE4 S2 sing N N 575 SF4 FE4 S3 sing N N 576 THR N CA sing N N 577 THR N H sing N N 578 THR N H2 sing N N 579 THR CA C sing N N 580 THR CA CB sing N N 581 THR CA HA sing N N 582 THR C O doub N N 583 THR C OXT sing N N 584 THR CB OG1 sing N N 585 THR CB CG2 sing N N 586 THR CB HB sing N N 587 THR OG1 HG1 sing N N 588 THR CG2 HG21 sing N N 589 THR CG2 HG22 sing N N 590 THR CG2 HG23 sing N N 591 THR OXT HXT sing N N 592 TRP N CA sing N N 593 TRP N H sing N N 594 TRP N H2 sing N N 595 TRP CA C sing N N 596 TRP CA CB sing N N 597 TRP CA HA sing N N 598 TRP C O doub N N 599 TRP C OXT sing N N 600 TRP CB CG sing N N 601 TRP CB HB2 sing N N 602 TRP CB HB3 sing N N 603 TRP CG CD1 doub Y N 604 TRP CG CD2 sing Y N 605 TRP CD1 NE1 sing Y N 606 TRP CD1 HD1 sing N N 607 TRP CD2 CE2 doub Y N 608 TRP CD2 CE3 sing Y N 609 TRP NE1 CE2 sing Y N 610 TRP NE1 HE1 sing N N 611 TRP CE2 CZ2 sing Y N 612 TRP CE3 CZ3 doub Y N 613 TRP CE3 HE3 sing N N 614 TRP CZ2 CH2 doub Y N 615 TRP CZ2 HZ2 sing N N 616 TRP CZ3 CH2 sing Y N 617 TRP CZ3 HZ3 sing N N 618 TRP CH2 HH2 sing N N 619 TRP OXT HXT sing N N 620 TYR N CA sing N N 621 TYR N H sing N N 622 TYR N H2 sing N N 623 TYR CA C sing N N 624 TYR CA CB sing N N 625 TYR CA HA sing N N 626 TYR C O doub N N 627 TYR C OXT sing N N 628 TYR CB CG sing N N 629 TYR CB HB2 sing N N 630 TYR CB HB3 sing N N 631 TYR CG CD1 doub Y N 632 TYR CG CD2 sing Y N 633 TYR CD1 CE1 sing Y N 634 TYR CD1 HD1 sing N N 635 TYR CD2 CE2 doub Y N 636 TYR CD2 HD2 sing N N 637 TYR CE1 CZ doub Y N 638 TYR CE1 HE1 sing N N 639 TYR CE2 CZ sing Y N 640 TYR CE2 HE2 sing N N 641 TYR CZ OH sing N N 642 TYR OH HH sing N N 643 TYR OXT HXT sing N N 644 VAL N CA sing N N 645 VAL N H sing N N 646 VAL N H2 sing N N 647 VAL CA C sing N N 648 VAL CA CB sing N N 649 VAL CA HA sing N N 650 VAL C O doub N N 651 VAL C OXT sing N N 652 VAL CB CG1 sing N N 653 VAL CB CG2 sing N N 654 VAL CB HB sing N N 655 VAL CG1 HG11 sing N N 656 VAL CG1 HG12 sing N N 657 VAL CG1 HG13 sing N N 658 VAL CG2 HG21 sing N N 659 VAL CG2 HG22 sing N N 660 VAL CG2 HG23 sing N N 661 VAL OXT HXT sing N N 662 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5F0Q 'double helix' 5F0Q 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C GTP 1 1_555 D DC 6 1_555 0.035 -0.085 -0.164 -8.976 -4.469 -2.416 1 C_GTP1:DC6_D C 1 ? D 6 ? 19 1 1 C G 2 1_555 D DC 5 1_555 -0.175 -0.057 -0.165 -7.238 -9.217 0.073 2 C_G2:DC5_D C 2 ? D 5 ? 19 1 1 C C 3 1_555 D DG 4 1_555 0.217 -0.092 -0.011 -4.366 -5.870 -0.837 3 C_C3:DG4_D C 3 ? D 4 ? 19 1 1 C G 4 1_555 D DC 3 1_555 -0.287 -0.180 -0.471 -8.509 -15.173 2.837 4 C_G4:DC3_D C 4 ? D 3 ? 19 1 1 C G 5 1_555 D DC 2 1_555 -0.115 -0.127 -0.170 -3.823 -4.701 1.857 5 C_G5:DC2_D C 5 ? D 2 ? 19 1 1 C C 6 1_555 D DG 1 1_555 0.297 -0.182 -0.174 3.956 7.447 1.572 6 C_C6:DG1_D C 6 ? D 1 ? 19 1 1 E GTP 1 1_555 F DC 6 1_555 -0.181 -0.133 -0.437 -10.803 -4.669 -3.139 7 E_GTP1:DC6_F E 1 ? F 6 ? 19 1 1 E G 2 1_555 F DC 5 1_555 -0.170 -0.045 -0.208 -3.762 -8.417 -0.878 8 E_G2:DC5_F E 2 ? F 5 ? 19 1 1 E C 3 1_555 F DG 4 1_555 0.313 -0.133 -0.036 -2.945 -3.506 0.637 9 E_C3:DG4_F E 3 ? F 4 ? 19 1 1 E G 4 1_555 F DC 3 1_555 -0.339 -0.070 -0.539 -12.415 -11.677 5.572 10 E_G4:DC3_F E 4 ? F 3 ? 19 1 1 E G 5 1_555 F DC 2 1_555 -0.077 -0.030 -0.219 -14.125 -5.681 -0.582 11 E_G5:DC2_F E 5 ? F 2 ? 19 1 1 E C 6 1_555 F DG 1 1_555 0.102 -0.050 0.241 -3.992 0.311 2.497 12 E_C6:DG1_F E 6 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C GTP 1 1_555 D DC 6 1_555 C G 2 1_555 D DC 5 1_555 0.101 -1.179 3.254 1.442 5.492 33.602 -2.858 0.049 3.031 9.416 -2.472 34.065 1 CC_GTP1G2:DC5DC6_DD C 1 ? D 6 ? C 2 ? D 5 ? 1 C G 2 1_555 D DC 5 1_555 C C 3 1_555 D DG 4 1_555 0.159 -0.804 3.298 -1.505 3.819 32.323 -2.094 -0.545 3.174 6.826 2.690 32.576 2 CC_G2C3:DG4DC5_DD C 2 ? D 5 ? C 3 ? D 4 ? 1 C C 3 1_555 D DG 4 1_555 C G 4 1_555 D DC 3 1_555 0.823 -1.522 3.350 2.758 12.759 30.287 -4.747 -1.008 2.580 23.118 -4.996 32.920 3 CC_C3G4:DC3DG4_DD C 3 ? D 4 ? C 4 ? D 3 ? 1 C G 4 1_555 D DC 3 1_555 C G 5 1_555 D DC 2 1_555 -0.738 -1.838 3.187 -5.317 9.389 27.468 -5.429 0.422 2.531 18.875 10.690 29.474 4 CC_G4G5:DC2DC3_DD C 4 ? D 3 ? C 5 ? D 2 ? 1 C G 5 1_555 D DC 2 1_555 C C 6 1_555 D DG 1 1_555 0.186 -1.469 3.185 1.248 5.759 32.520 -3.497 -0.128 2.894 10.180 -2.206 33.036 5 CC_G5C6:DG1DC2_DD C 5 ? D 2 ? C 6 ? D 1 ? 1 E GTP 1 1_555 F DC 6 1_555 E G 2 1_555 F DC 5 1_555 0.492 -1.185 3.299 1.180 0.548 31.809 -2.261 -0.680 3.295 0.999 -2.151 31.835 6 EE_GTP1G2:DC5DC6_FF E 1 ? F 6 ? E 2 ? F 5 ? 1 E G 2 1_555 F DC 5 1_555 E C 3 1_555 F DG 4 1_555 0.591 -1.169 3.311 1.561 5.194 33.796 -2.798 -0.760 3.125 8.864 -2.665 34.216 7 EE_G2C3:DG4DC5_FF E 2 ? F 5 ? E 3 ? F 4 ? 1 E C 3 1_555 F DG 4 1_555 E G 4 1_555 F DC 3 1_555 0.534 -1.679 3.412 2.389 14.290 26.775 -5.867 -0.573 2.281 28.373 -4.742 30.381 8 EE_C3G4:DC3DG4_FF E 3 ? F 4 ? E 4 ? F 3 ? 1 E G 4 1_555 F DC 3 1_555 E G 5 1_555 F DC 2 1_555 -1.360 -1.677 3.272 -6.880 11.828 32.733 -4.427 1.265 2.744 19.937 11.596 35.406 9 EE_G4G5:DC2DC3_FF E 4 ? F 3 ? E 5 ? F 2 ? 1 E G 5 1_555 F DC 2 1_555 E C 6 1_555 F DG 1 1_555 0.955 -1.683 3.005 -0.180 9.030 30.363 -4.499 -1.780 2.412 16.780 0.334 31.647 10 EE_G5C6:DG1DC2_FF E 5 ? F 2 ? E 6 ? F 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM101167 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' CA036727 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM103403 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'IRON/SULFUR CLUSTER' SF4 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RR2 _pdbx_initial_refinement_model.details ? # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'native gel electrophoresis' ? 2 2 'native gel electrophoresis' ? #