HEADER CHAPERONE 02-DEC-15 5F3K TITLE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF HTRAP1 N-TERMINAL DOMAIN-APO COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN 75 KDA, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 60-294; COMPND 5 SYNONYM: HSP 75,TNFR-ASSOCIATED PROTEIN 1,TUMOR NECROSIS FACTOR TYPE COMPND 6 1 RECEPTOR-ASSOCIATED PROTEIN,TRAP-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRAP1, HSP75; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: CODON PLUS-RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PTYB12 KEYWDS TRAP1, HSP90, CHAPERONE, APO EXPDTA X-RAY DIFFRACTION AUTHOR N.SUNG,J.LEE,J.KIM,C.CHANG,A.JOACHIMIAK,S.LEE,F.T.F.TSAI REVDAT 6 27-SEP-23 5F3K 1 REMARK REVDAT 5 25-DEC-19 5F3K 1 REMARK REVDAT 4 13-SEP-17 5F3K 1 JRNL REMARK REVDAT 3 22-JUN-16 5F3K 1 JRNL REVDAT 2 23-MAR-16 5F3K 1 JRNL REVDAT 1 02-MAR-16 5F3K 0 JRNL AUTH N.SUNG,J.LEE,J.H.KIM,C.CHANG,A.JOACHIMIAK,S.LEE,F.T.TSAI JRNL TITL MITOCHONDRIAL HSP90 IS A LIGAND-ACTIVATED MOLECULAR JRNL TITL 2 CHAPERONE COUPLING ATP BINDING TO DIMER CLOSURE THROUGH A JRNL TITL 3 COILED-COIL INTERMEDIATE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 2952 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 26929380 JRNL DOI 10.1073/PNAS.1516167113 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 49944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2662 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3634 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3162 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 408 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.75000 REMARK 3 B22 (A**2) : 0.75000 REMARK 3 B33 (A**2) : -1.13000 REMARK 3 B12 (A**2) : 0.38000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.782 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3208 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4314 ; 0.835 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 404 ; 7.167 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;34.569 ;24.069 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 581 ;14.691 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.468 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 489 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2378 ; 0.022 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2009 ; 2.489 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3217 ; 3.851 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1199 ; 6.144 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1097 ; 9.607 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9282 -24.3451 37.4608 REMARK 3 T TENSOR REMARK 3 T11: 0.1132 T22: 0.0601 REMARK 3 T33: 0.0771 T12: 0.0131 REMARK 3 T13: -0.0211 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.4896 L22: 0.0755 REMARK 3 L33: 0.1418 L12: -0.1368 REMARK 3 L13: -0.2489 L23: 0.0695 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.0646 S13: -0.0632 REMARK 3 S21: -0.0170 S22: -0.0317 S23: -0.0087 REMARK 3 S31: -0.0386 S32: -0.0348 S33: 0.0390 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 82 B 294 REMARK 3 ORIGIN FOR THE GROUP (A): 36.2409 -14.1888 79.0201 REMARK 3 T TENSOR REMARK 3 T11: 0.1012 T22: 0.0747 REMARK 3 T33: 0.0530 T12: 0.0477 REMARK 3 T13: -0.0290 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.3425 L22: 0.3584 REMARK 3 L33: 0.1119 L12: -0.3441 REMARK 3 L13: 0.1925 L23: -0.1998 REMARK 3 S TENSOR REMARK 3 S11: -0.0756 S12: -0.0956 S13: -0.0190 REMARK 3 S21: 0.0460 S22: 0.0932 S23: 0.0158 REMARK 3 S31: -0.0234 S32: -0.0499 S33: -0.0175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5F3K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52606 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 77.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5F5R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 MICRO LITER HTRAP1N, 25 MG/ML, IN 30 REMARK 280 MM TRISHCL PH 8.5, 0.15 M NACL, AND 1 MM TCEP WAS MIXED WITH AN REMARK 280 EQUAL VOLUME OF RESERVOIR SOLUTION CONSISTING OF 100 MM HEPES PH REMARK 280 7.5, 100 MM CACL2 , 23 PERCENT PEG3350, 4 PERCENT ISOPROPANOL, REMARK 280 AND 0.4 MICRO LITER OF 1 M LICL2., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 155.58133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.79067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.79067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 155.58133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 57 REMARK 465 GLY A 58 REMARK 465 HIS A 59 REMARK 465 SER A 60 REMARK 465 THR A 61 REMARK 465 GLN A 62 REMARK 465 THR A 63 REMARK 465 ALA A 64 REMARK 465 GLU A 65 REMARK 465 ASP A 66 REMARK 465 LYS A 67 REMARK 465 GLU A 68 REMARK 465 GLU A 69 REMARK 465 PRO A 70 REMARK 465 LEU A 71 REMARK 465 HIS A 72 REMARK 465 SER A 73 REMARK 465 ILE A 74 REMARK 465 ILE A 75 REMARK 465 SER A 76 REMARK 465 SER A 77 REMARK 465 THR A 78 REMARK 465 GLU A 79 REMARK 465 SER A 80 REMARK 465 VAL A 81 REMARK 465 ASN A 189 REMARK 465 GLN A 190 REMARK 465 ALA A 191 REMARK 465 GLU A 192 REMARK 465 ALA A 193 REMARK 465 SER A 194 REMARK 465 SER A 195 REMARK 465 LYS A 196 REMARK 465 ALA B 57 REMARK 465 GLY B 58 REMARK 465 HIS B 59 REMARK 465 SER B 60 REMARK 465 THR B 61 REMARK 465 GLN B 62 REMARK 465 THR B 63 REMARK 465 ALA B 64 REMARK 465 GLU B 65 REMARK 465 ASP B 66 REMARK 465 LYS B 67 REMARK 465 GLU B 68 REMARK 465 GLU B 69 REMARK 465 PRO B 70 REMARK 465 LEU B 71 REMARK 465 HIS B 72 REMARK 465 SER B 73 REMARK 465 ILE B 74 REMARK 465 ILE B 75 REMARK 465 SER B 76 REMARK 465 SER B 77 REMARK 465 THR B 78 REMARK 465 GLU B 79 REMARK 465 SER B 80 REMARK 465 VAL B 81 REMARK 465 GLN B 190 REMARK 465 ALA B 191 REMARK 465 GLU B 192 REMARK 465 ALA B 193 REMARK 465 SER B 194 REMARK 465 SER B 195 REMARK 465 LYS B 196 REMARK 465 ILE B 197 REMARK 465 ILE B 198 REMARK 465 GLY B 199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY B 225 O HOH B 301 1.87 REMARK 500 NH2 ARG A 114 O HOH A 301 2.06 REMARK 500 O HOH B 306 O HOH B 383 2.11 REMARK 500 O PRO A 224 O HOH A 302 2.12 REMARK 500 O HOH B 478 O HOH B 486 2.14 REMARK 500 O HOH A 467 O HOH A 485 2.16 REMARK 500 OH TYR B 229 O HOH B 302 2.18 REMARK 500 O HOH A 304 O HOH A 431 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 159 40.28 -103.29 REMARK 500 SER B 236 -169.45 -79.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 128 0.09 SIDE CHAIN REMARK 500 TYR A 277 0.07 SIDE CHAIN REMARK 500 ARG B 128 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5F5R RELATED DB: PDB DBREF 5F3K A 60 294 UNP Q12931 TRAP1_HUMAN 60 294 DBREF 5F3K B 60 294 UNP Q12931 TRAP1_HUMAN 60 294 SEQADV 5F3K ALA A 57 UNP Q12931 EXPRESSION TAG SEQADV 5F3K GLY A 58 UNP Q12931 EXPRESSION TAG SEQADV 5F3K HIS A 59 UNP Q12931 EXPRESSION TAG SEQADV 5F3K ALA B 57 UNP Q12931 EXPRESSION TAG SEQADV 5F3K GLY B 58 UNP Q12931 EXPRESSION TAG SEQADV 5F3K HIS B 59 UNP Q12931 EXPRESSION TAG SEQRES 1 A 238 ALA GLY HIS SER THR GLN THR ALA GLU ASP LYS GLU GLU SEQRES 2 A 238 PRO LEU HIS SER ILE ILE SER SER THR GLU SER VAL GLN SEQRES 3 A 238 GLY SER THR SER LYS HIS GLU PHE GLN ALA GLU THR LYS SEQRES 4 A 238 LYS LEU LEU ASP ILE VAL ALA ARG SER LEU TYR SER GLU SEQRES 5 A 238 LYS GLU VAL PHE ILE ARG GLU LEU ILE SER ASN ALA SER SEQRES 6 A 238 ASP ALA LEU GLU LYS LEU ARG HIS LYS LEU VAL SER ASP SEQRES 7 A 238 GLY GLN ALA LEU PRO GLU MET GLU ILE HIS LEU GLN THR SEQRES 8 A 238 ASN ALA GLU LYS GLY THR ILE THR ILE GLN ASP THR GLY SEQRES 9 A 238 ILE GLY MET THR GLN GLU GLU LEU VAL SER ASN LEU GLY SEQRES 10 A 238 THR ILE ALA ARG SER GLY SER LYS ALA PHE LEU ASP ALA SEQRES 11 A 238 LEU GLN ASN GLN ALA GLU ALA SER SER LYS ILE ILE GLY SEQRES 12 A 238 GLN PHE GLY VAL GLY PHE TYR SER ALA PHE MET VAL ALA SEQRES 13 A 238 ASP ARG VAL GLU VAL TYR SER ARG SER ALA ALA PRO GLY SEQRES 14 A 238 SER LEU GLY TYR GLN TRP LEU SER ASP GLY SER GLY VAL SEQRES 15 A 238 PHE GLU ILE ALA GLU ALA SER GLY VAL ARG THR GLY THR SEQRES 16 A 238 LYS ILE ILE ILE HIS LEU LYS SER ASP CYS LYS GLU PHE SEQRES 17 A 238 SER SER GLU ALA ARG VAL ARG ASP VAL VAL THR LYS TYR SEQRES 18 A 238 SER ASN PHE VAL SER PHE PRO LEU TYR LEU ASN GLY ARG SEQRES 19 A 238 ARG MET ASN THR SEQRES 1 B 238 ALA GLY HIS SER THR GLN THR ALA GLU ASP LYS GLU GLU SEQRES 2 B 238 PRO LEU HIS SER ILE ILE SER SER THR GLU SER VAL GLN SEQRES 3 B 238 GLY SER THR SER LYS HIS GLU PHE GLN ALA GLU THR LYS SEQRES 4 B 238 LYS LEU LEU ASP ILE VAL ALA ARG SER LEU TYR SER GLU SEQRES 5 B 238 LYS GLU VAL PHE ILE ARG GLU LEU ILE SER ASN ALA SER SEQRES 6 B 238 ASP ALA LEU GLU LYS LEU ARG HIS LYS LEU VAL SER ASP SEQRES 7 B 238 GLY GLN ALA LEU PRO GLU MET GLU ILE HIS LEU GLN THR SEQRES 8 B 238 ASN ALA GLU LYS GLY THR ILE THR ILE GLN ASP THR GLY SEQRES 9 B 238 ILE GLY MET THR GLN GLU GLU LEU VAL SER ASN LEU GLY SEQRES 10 B 238 THR ILE ALA ARG SER GLY SER LYS ALA PHE LEU ASP ALA SEQRES 11 B 238 LEU GLN ASN GLN ALA GLU ALA SER SER LYS ILE ILE GLY SEQRES 12 B 238 GLN PHE GLY VAL GLY PHE TYR SER ALA PHE MET VAL ALA SEQRES 13 B 238 ASP ARG VAL GLU VAL TYR SER ARG SER ALA ALA PRO GLY SEQRES 14 B 238 SER LEU GLY TYR GLN TRP LEU SER ASP GLY SER GLY VAL SEQRES 15 B 238 PHE GLU ILE ALA GLU ALA SER GLY VAL ARG THR GLY THR SEQRES 16 B 238 LYS ILE ILE ILE HIS LEU LYS SER ASP CYS LYS GLU PHE SEQRES 17 B 238 SER SER GLU ALA ARG VAL ARG ASP VAL VAL THR LYS TYR SEQRES 18 B 238 SER ASN PHE VAL SER PHE PRO LEU TYR LEU ASN GLY ARG SEQRES 19 B 238 ARG MET ASN THR FORMUL 3 HOH *408(H2 O) HELIX 1 AA1 THR A 85 LYS A 96 1 12 HELIX 2 AA2 LEU A 97 GLU A 108 1 12 HELIX 3 AA3 GLU A 110 GLY A 135 1 26 HELIX 4 AA4 THR A 164 ARG A 177 1 14 HELIX 5 AA5 SER A 178 GLN A 188 1 11 HELIX 6 AA6 GLY A 202 GLY A 204 5 3 HELIX 7 AA7 PHE A 205 MET A 210 1 6 HELIX 8 AA8 CYS A 261 SER A 265 5 5 HELIX 9 AA9 SER A 266 ASN A 279 1 14 HELIX 10 AB1 THR B 85 GLU B 108 1 24 HELIX 11 AB2 GLU B 110 ASP B 134 1 25 HELIX 12 AB3 THR B 164 ARG B 177 1 14 HELIX 13 AB4 SER B 178 GLN B 188 1 11 HELIX 14 AB5 GLY B 202 GLY B 204 5 3 HELIX 15 AB6 PHE B 205 MET B 210 1 6 HELIX 16 AB7 CYS B 261 SER B 265 5 5 HELIX 17 AB8 SER B 266 SER B 278 1 13 HELIX 18 AB9 ASN B 279 VAL B 281 5 3 SHEET 1 AA1 8 PHE A 239 GLU A 243 0 SHEET 2 AA1 8 GLY A 228 SER A 233 -1 N GLN A 230 O ALA A 242 SHEET 3 AA1 8 ALA A 212 ARG A 220 -1 N VAL A 217 O TRP A 231 SHEET 4 AA1 8 GLY A 250 LEU A 257 -1 O LYS A 252 N TYR A 218 SHEET 5 AA1 8 THR A 153 ASP A 158 -1 N ILE A 154 O ILE A 255 SHEET 6 AA1 8 ILE A 143 ASN A 148 -1 N HIS A 144 O GLN A 157 SHEET 7 AA1 8 LEU A 285 LEU A 287 1 O TYR A 286 N ILE A 143 SHEET 8 AA1 8 ARG A 290 ARG A 291 -1 O ARG A 290 N LEU A 287 SHEET 1 AA2 8 PHE B 239 GLU B 243 0 SHEET 2 AA2 8 GLY B 228 SER B 233 -1 N GLN B 230 O ALA B 242 SHEET 3 AA2 8 ALA B 212 ARG B 220 -1 N VAL B 217 O TRP B 231 SHEET 4 AA2 8 GLY B 250 LEU B 257 -1 O LYS B 252 N TYR B 218 SHEET 5 AA2 8 THR B 153 ASP B 158 -1 N ILE B 156 O ILE B 253 SHEET 6 AA2 8 ILE B 143 ASN B 148 -1 N HIS B 144 O GLN B 157 SHEET 7 AA2 8 LEU B 285 LEU B 287 1 O TYR B 286 N LEU B 145 SHEET 8 AA2 8 ARG B 290 ARG B 291 -1 O ARG B 290 N LEU B 287 CRYST1 65.250 65.250 233.372 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015326 0.008848 0.000000 0.00000 SCALE2 0.000000 0.017697 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004285 0.00000