HEADER TRANSFERASE 03-DEC-15 5F47 TITLE CRYSTAL STRUCTURE OF AN AMINOGLYCOSIDE ACETYLTRANSFERASE META-AAC0020 TITLE 2 FROM AN UNCULTURED SOIL METAGENOMIC SAMPLE IN COMPLEX WITH TREHALOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE ACETYLTRANSFERASE META-AAC0020; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS GNAT FOLD, GCN5-N-ACETYLTRANSFERASE FOLD, ACETYLTRANSFERASE, KEYWDS 2 AMINOGLYCOSIDE, ANTIBIOTIC RESISTANCE, METAGENOME, SOIL, COENZYME A, KEYWDS 3 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 4 DISEASES, CSGID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.XU,T.SKARINA,Z.WAWRZAK,P.J.STOGIOS,V.YIM,A.SAVCHENKO,W.F.ANDERSON, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 7 06-MAR-24 5F47 1 HETSYN REVDAT 6 29-JUL-20 5F47 1 COMPND REMARK HET HETNAM REVDAT 6 2 1 HETSYN FORMUL LINK SITE REVDAT 6 3 1 ATOM REVDAT 5 03-APR-19 5F47 1 TITLE COMPND JRNL REMARK REVDAT 4 27-SEP-17 5F47 1 REMARK REVDAT 3 30-MAR-16 5F47 1 AUTHOR REVDAT 2 24-FEB-16 5F47 1 AUTHOR REVDAT 1 30-DEC-15 5F47 0 JRNL AUTH Z.XU,P.J.STOGIOS,A.T.QUAILE,K.J.FORSBERG,S.PATEL,T.SKARINA, JRNL AUTH 2 S.HOULISTON,C.ARROWSMITH,G.DANTAS,A.SAVCHENKO JRNL TITL STRUCTURAL AND FUNCTIONAL SURVEY OF ENVIRONMENTAL JRNL TITL 2 AMINOGLYCOSIDE ACETYLTRANSFERASES REVEALS FUNCTIONALITY OF JRNL TITL 3 RESISTANCE ENZYMES. JRNL REF ACS INFECT DIS V. 3 653 2017 JRNL REFN ESSN 2373-8227 JRNL PMID 28756664 JRNL DOI 10.1021/ACSINFECDIS.7B00068 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 51548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.9814 - 3.6046 0.98 3725 153 0.1342 0.1512 REMARK 3 2 3.6046 - 2.8621 0.99 3632 142 0.1404 0.1553 REMARK 3 3 2.8621 - 2.5006 0.98 3637 141 0.1593 0.1829 REMARK 3 4 2.5006 - 2.2721 0.98 3585 152 0.1575 0.1782 REMARK 3 5 2.2721 - 2.1093 0.98 3604 137 0.1588 0.2055 REMARK 3 6 2.1093 - 1.9850 0.97 3555 144 0.1589 0.1798 REMARK 3 7 1.9850 - 1.8856 0.97 3558 142 0.1605 0.1779 REMARK 3 8 1.8856 - 1.8035 0.97 3519 153 0.1766 0.2015 REMARK 3 9 1.8035 - 1.7341 0.96 3518 139 0.1896 0.2306 REMARK 3 10 1.7341 - 1.6743 0.96 3502 136 0.1798 0.2042 REMARK 3 11 1.6743 - 1.6220 0.96 3492 149 0.1850 0.2104 REMARK 3 12 1.6220 - 1.5756 0.96 3489 147 0.1963 0.2112 REMARK 3 13 1.5756 - 1.5341 0.96 3478 132 0.2072 0.2545 REMARK 3 14 1.5341 - 1.4970 0.89 3255 132 0.2277 0.2398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2659 REMARK 3 ANGLE : 1.139 3613 REMARK 3 CHIRALITY : 0.048 401 REMARK 3 PLANARITY : 0.006 460 REMARK 3 DIHEDRAL : 14.157 980 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 7:15) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7014 37.1411 31.7157 REMARK 3 T TENSOR REMARK 3 T11: 0.5057 T22: 0.3348 REMARK 3 T33: 0.3002 T12: -0.0602 REMARK 3 T13: -0.0809 T23: 0.1404 REMARK 3 L TENSOR REMARK 3 L11: 6.0119 L22: 5.3244 REMARK 3 L33: 7.3269 L12: 1.7316 REMARK 3 L13: -2.8119 L23: -5.9423 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: 0.7563 S13: 0.9517 REMARK 3 S21: -0.5145 S22: 0.1342 S23: 0.2598 REMARK 3 S31: -1.2099 S32: -0.3027 S33: -0.1259 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 16:54) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9786 27.2310 44.2381 REMARK 3 T TENSOR REMARK 3 T11: 0.1325 T22: 0.2562 REMARK 3 T33: 0.1655 T12: -0.0308 REMARK 3 T13: 0.0170 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.9337 L22: 1.9874 REMARK 3 L33: 3.5433 L12: -0.0364 REMARK 3 L13: 0.5850 L23: 0.9486 REMARK 3 S TENSOR REMARK 3 S11: -0.0777 S12: 0.2092 S13: 0.0800 REMARK 3 S21: -0.0406 S22: 0.1575 S23: -0.2240 REMARK 3 S31: -0.0652 S32: 0.5338 S33: -0.0898 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 55:126) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8752 27.1235 42.4842 REMARK 3 T TENSOR REMARK 3 T11: 0.1294 T22: 0.1300 REMARK 3 T33: 0.1098 T12: -0.0032 REMARK 3 T13: 0.0143 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.1831 L22: 3.1552 REMARK 3 L33: 2.0318 L12: 0.9089 REMARK 3 L13: 0.4833 L23: -0.4556 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: 0.1203 S13: 0.1454 REMARK 3 S21: -0.0723 S22: 0.0365 S23: -0.0678 REMARK 3 S31: -0.1986 S32: 0.0565 S33: 0.0119 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 127:157) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5504 30.7935 56.9773 REMARK 3 T TENSOR REMARK 3 T11: 0.2023 T22: 0.1325 REMARK 3 T33: 0.1800 T12: 0.0013 REMARK 3 T13: -0.0044 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 1.2197 L22: 2.0820 REMARK 3 L33: 2.0758 L12: -1.0518 REMARK 3 L13: 0.1561 L23: -0.7720 REMARK 3 S TENSOR REMARK 3 S11: -0.1996 S12: -0.1942 S13: 0.3113 REMARK 3 S21: 0.2286 S22: 0.1269 S23: -0.0957 REMARK 3 S31: -0.4769 S32: -0.1884 S33: 0.0893 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 6:9) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9776 -2.6426 77.6810 REMARK 3 T TENSOR REMARK 3 T11: 0.9934 T22: 1.0629 REMARK 3 T33: 0.6198 T12: -0.0706 REMARK 3 T13: -0.2180 T23: 0.3521 REMARK 3 L TENSOR REMARK 3 L11: 4.4034 L22: 9.6617 REMARK 3 L33: 6.9763 L12: -4.7137 REMARK 3 L13: 3.1531 L23: 1.2843 REMARK 3 S TENSOR REMARK 3 S11: -0.9836 S12: -1.9386 S13: -0.4910 REMARK 3 S21: 2.3523 S22: 0.7140 S23: -0.1312 REMARK 3 S31: 0.0634 S32: 0.6781 S33: 0.2224 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 10:61) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4749 3.0209 54.3148 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.1283 REMARK 3 T33: 0.2062 T12: -0.0173 REMARK 3 T13: -0.0237 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.8294 L22: 2.1023 REMARK 3 L33: 2.7955 L12: -0.1981 REMARK 3 L13: 0.5310 L23: 0.2464 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.0125 S13: -0.4811 REMARK 3 S21: 0.0573 S22: 0.0320 S23: -0.0305 REMARK 3 S31: 0.2909 S32: -0.1610 S33: -0.0470 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 62:126) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3057 10.3485 61.5308 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.1299 REMARK 3 T33: 0.1239 T12: 0.0137 REMARK 3 T13: -0.0132 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 3.0495 L22: 2.9120 REMARK 3 L33: 3.5140 L12: 1.5000 REMARK 3 L13: -0.8349 L23: -1.7902 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: -0.2172 S13: -0.2200 REMARK 3 S21: 0.1001 S22: 0.0189 S23: -0.0280 REMARK 3 S31: 0.1518 S32: -0.0670 S33: -0.0311 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 127:157) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5282 22.3254 63.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.1665 T22: 0.1726 REMARK 3 T33: 0.1505 T12: -0.0054 REMARK 3 T13: 0.0234 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.1549 L22: 0.9259 REMARK 3 L33: 5.2794 L12: -1.0882 REMARK 3 L13: 1.6850 L23: -1.1773 REMARK 3 S TENSOR REMARK 3 S11: -0.0571 S12: -0.2264 S13: -0.1476 REMARK 3 S21: 0.1716 S22: 0.1775 S23: 0.1088 REMARK 3 S31: 0.0258 S32: -0.3680 S33: -0.1166 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F47 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51615 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.497 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: APOENZYME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2 M CALCIUM CHLORIDE, REMARK 280 10 MM NEOMYCIN, 2% TREHALOSE, PARATONE, PH 7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.00050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.97700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.00050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.97700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -273.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -24.11796 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 88.83012 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 479 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 509 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 611 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 378 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 391 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 MET A 5 REMARK 465 GLU A 6 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLN B 3 REMARK 465 ASN B 4 REMARK 465 MET B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 14 O HOH B 301 2.11 REMARK 500 O HOH B 382 O HOH B 607 2.13 REMARK 500 O HOH B 305 O HOH B 471 2.16 REMARK 500 O HOH B 456 O HOH B 516 2.16 REMARK 500 OG SER B 41 O HOH B 302 2.16 REMARK 500 OD1 ASP A 132 O HOH A 301 2.17 REMARK 500 O HOH A 323 O HOH B 320 2.19 REMARK 500 O HOH A 515 O HOH A 525 2.19 REMARK 500 O HOH A 595 O HOH A 596 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 384 O HOH B 564 2557 2.08 REMARK 500 O HOH A 543 O HOH B 400 1554 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 -123.57 55.52 REMARK 500 GLU B 65 -116.57 55.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 637 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 637 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH B 638 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 639 DISTANCE = 6.65 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 14 OE2 REMARK 620 2 ASP A 20 OD1 93.2 REMARK 620 3 ASP A 20 OD2 93.4 51.5 REMARK 620 4 HOH A 354 O 178.9 87.9 87.2 REMARK 620 5 HOH A 429 O 89.3 130.2 78.7 89.8 REMARK 620 6 HOH A 454 O 90.4 70.9 122.3 90.1 158.9 REMARK 620 7 HOH B 461 O 98.8 145.4 157.4 80.4 82.5 76.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 205 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE2 REMARK 620 2 ASN A 53 O 98.0 REMARK 620 3 ASN A 55 OD1 152.4 98.2 REMARK 620 4 HOH A 377 O 100.8 68.0 105.9 REMARK 620 5 HOH A 423 O 83.1 128.0 69.3 163.3 REMARK 620 6 HOH A 448 O 75.0 72.3 88.9 139.1 57.7 REMARK 620 7 HOH A 459 O 79.3 155.9 94.4 88.9 75.8 128.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 83 OE1 REMARK 620 2 GLU A 83 OE2 52.0 REMARK 620 3 HOH A 310 O 61.2 94.4 REMARK 620 4 HOH A 341 O 64.0 111.9 71.3 REMARK 620 5 PHE B 40 O 100.7 52.1 140.6 135.3 REMARK 620 6 HOH B 324 O 140.4 156.3 109.3 76.5 105.9 REMARK 620 7 HOH B 327 O 129.6 84.8 104.5 162.8 58.1 89.6 REMARK 620 8 HOH B 580 O 129.9 151.2 71.2 87.5 126.9 45.9 75.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 327 O REMARK 620 2 HOH A 374 O 100.4 REMARK 620 3 HOH A 424 O 77.6 73.9 REMARK 620 4 HOH A 510 O 95.0 134.8 68.4 REMARK 620 5 GLC C 1 O4 71.3 80.6 135.0 144.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 314 O REMARK 620 2 HOH A 329 O 127.4 REMARK 620 3 HOH A 352 O 93.7 70.6 REMARK 620 4 ASN B 39 OD1 72.1 150.1 87.2 REMARK 620 5 HOH B 407 O 87.0 128.3 154.0 68.3 REMARK 620 6 HOH B 486 O 151.2 80.1 87.9 79.3 79.5 REMARK 620 7 HOH B 564 O 55.8 71.6 76.6 123.5 123.7 150.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 360 O REMARK 620 2 HOH A 458 O 90.0 REMARK 620 3 HOH A 478 O 89.1 79.0 REMARK 620 4 HOH A 478 O 99.5 46.1 35.1 REMARK 620 5 HOH A 527 O 80.5 147.7 70.1 104.9 REMARK 620 6 LYS B 157 OXT 171.6 82.0 86.6 73.0 104.8 REMARK 620 7 HOH B 487 O 82.0 73.3 150.8 119.2 134.5 98.3 REMARK 620 8 HOH B 507 O 97.6 130.1 149.8 162.4 81.9 89.7 59.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 422 O REMARK 620 2 HOH A 442 O 86.4 REMARK 620 3 HOH A 539 O 78.4 77.0 REMARK 620 4 HOH B 364 O 72.6 83.5 145.9 REMARK 620 5 HOH B 422 O 117.3 136.9 139.7 71.7 REMARK 620 6 HOH B 474 O 139.6 67.8 122.0 73.9 71.6 REMARK 620 7 HOH B 619 O 54.4 138.2 104.8 72.3 66.4 132.2 REMARK 620 8 HOH B 619 O 73.3 146.2 72.7 114.4 76.9 142.7 42.3 REMARK 620 9 HOH B 628 O 148.3 97.1 71.9 139.0 81.0 68.6 123.5 87.4 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 18 OE2 REMARK 620 2 ASN B 53 O 94.4 REMARK 620 3 ASN B 55 OD1 171.5 90.1 REMARK 620 4 HOH B 335 O 91.4 66.3 83.7 REMARK 620 5 HOH B 446 O 92.1 74.7 96.0 140.9 REMARK 620 6 HOH B 495 O 90.6 143.1 81.5 77.0 141.8 REMARK 620 7 HOH B 512 O 95.3 143.0 85.4 148.8 69.3 72.4 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95418 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 5F46 RELATED DB: PDB REMARK 900 RELATED ID: 5F48 RELATED DB: PDB REMARK 900 RELATED ID: 5F49 RELATED DB: PDB REMARK 900 RELATED ID: 5U08 RELATED DB: PDB DBREF1 5F47 A 1 157 UNP A0A059WZ16_9BACT DBREF2 5F47 A A0A059WZ16 1 157 DBREF1 5F47 B 1 157 UNP A0A059WZ16_9BACT DBREF2 5F47 B A0A059WZ16 1 157 SEQRES 1 A 157 MET GLY GLN ASN MET GLU ILE ASP ASN PHE LEU LYS ILE SEQRES 2 A 157 GLU ARG LEU ALA GLU ASN ASP LEU PRO LYS PHE ILE GLN SEQRES 3 A 157 LEU ILE ARG LEU PHE GLU ALA VAL PHE GLU MET LYS ASN SEQRES 4 A 157 PHE SER ILE PRO ASP SER GLU HIS LEU GLN LYS LEU LEU SEQRES 5 A 157 ASN GLN ASN ASN PHE TYR VAL PHE VAL ALA LEU LEU GLU SEQRES 6 A 157 ASN LYS ILE VAL GLY GLY LEU THR SER TYR VAL LEU GLU SEQRES 7 A 157 GLN TYR TYR SER GLU LYS PRO LEU ALA TYR ILE TYR ASP SEQRES 8 A 157 LEU ALA VAL ASP THR ASN TRP GLN ARG GLN GLY ILE GLY SEQRES 9 A 157 LYS LYS LEU ILE THR ALA THR ASN GLN PHE TYR THR GLU SEQRES 10 A 157 LYS GLY PHE GLU GLU VAL PHE VAL GLN ALA ASP LYS VAL SEQRES 11 A 157 ASP ASP TYR ALA LEU ASP PHE TYR ARG SER THR LYS PRO SEQRES 12 A 157 THR ALA GLU GLU GLN VAL VAL HIS PHE TYR TYR THR LEU SEQRES 13 A 157 LYS SEQRES 1 B 157 MET GLY GLN ASN MET GLU ILE ASP ASN PHE LEU LYS ILE SEQRES 2 B 157 GLU ARG LEU ALA GLU ASN ASP LEU PRO LYS PHE ILE GLN SEQRES 3 B 157 LEU ILE ARG LEU PHE GLU ALA VAL PHE GLU MET LYS ASN SEQRES 4 B 157 PHE SER ILE PRO ASP SER GLU HIS LEU GLN LYS LEU LEU SEQRES 5 B 157 ASN GLN ASN ASN PHE TYR VAL PHE VAL ALA LEU LEU GLU SEQRES 6 B 157 ASN LYS ILE VAL GLY GLY LEU THR SER TYR VAL LEU GLU SEQRES 7 B 157 GLN TYR TYR SER GLU LYS PRO LEU ALA TYR ILE TYR ASP SEQRES 8 B 157 LEU ALA VAL ASP THR ASN TRP GLN ARG GLN GLY ILE GLY SEQRES 9 B 157 LYS LYS LEU ILE THR ALA THR ASN GLN PHE TYR THR GLU SEQRES 10 B 157 LYS GLY PHE GLU GLU VAL PHE VAL GLN ALA ASP LYS VAL SEQRES 11 B 157 ASP ASP TYR ALA LEU ASP PHE TYR ARG SER THR LYS PRO SEQRES 12 B 157 THR ALA GLU GLU GLN VAL VAL HIS PHE TYR TYR THR LEU SEQRES 13 B 157 LYS HET GLC C 1 11 HET GLC C 2 12 HET CA A 202 1 HET CA A 203 1 HET CA A 204 1 HET CA A 205 1 HET CL A 206 1 HET CA B 201 1 HET CA B 202 1 HET CA B 203 1 HET CA B 204 1 HET CL B 205 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 3 GLC 2(C6 H12 O6) FORMUL 4 CA 8(CA 2+) FORMUL 8 CL 2(CL 1-) FORMUL 14 HOH *676(H2 O) HELIX 1 AA1 ASP A 20 PHE A 35 1 16 HELIX 2 AA2 ASP A 44 ASN A 53 1 10 HELIX 3 AA3 THR A 96 GLN A 99 5 4 HELIX 4 AA4 GLY A 102 LYS A 118 1 17 HELIX 5 AA5 ASP A 131 SER A 140 1 10 HELIX 6 AA6 ASP B 20 PHE B 35 1 16 HELIX 7 AA7 ASP B 44 GLN B 54 1 11 HELIX 8 AA8 THR B 96 GLN B 99 5 4 HELIX 9 AA9 GLY B 102 LYS B 118 1 17 HELIX 10 AB1 ASP B 131 ARG B 139 1 9 SHEET 1 AA112 LEU A 11 ARG A 15 0 SHEET 2 AA112 PHE A 57 LEU A 64 -1 O VAL A 61 N GLU A 14 SHEET 3 AA112 LYS A 67 LEU A 77 -1 O GLY A 70 N ALA A 62 SHEET 4 AA112 LEU A 86 VAL A 94 -1 O TYR A 88 N TYR A 75 SHEET 5 AA112 GLU A 122 ASP A 128 1 O PHE A 124 N ILE A 89 SHEET 6 AA112 ALA B 145 THR B 155 -1 O TYR B 154 N VAL A 123 SHEET 7 AA112 ALA A 145 THR A 155 -1 N GLU A 147 O HIS B 151 SHEET 8 AA112 GLU B 122 ASP B 128 -1 O ALA B 127 N VAL A 150 SHEET 9 AA112 LEU B 86 VAL B 94 1 N ILE B 89 O PHE B 124 SHEET 10 AA112 LYS B 67 LEU B 77 -1 N TYR B 75 O TYR B 88 SHEET 11 AA112 PHE B 57 LEU B 64 -1 N ALA B 62 O GLY B 70 SHEET 12 AA112 LEU B 11 ARG B 15 -1 N GLU B 14 O VAL B 61 LINK C1 GLC C 1 O1 GLC C 2 1555 1555 1.44 LINK OE2 GLU A 14 CA CA A 202 1555 1555 2.27 LINK OE2 GLU A 18 CA CA A 205 1555 1555 2.15 LINK OD1 ASP A 20 CA CA A 202 1555 1555 2.63 LINK OD2 ASP A 20 CA CA A 202 1555 1555 2.42 LINK O ASN A 53 CA CA A 205 1555 1555 2.37 LINK OD1 ASN A 55 CA CA A 205 1555 1555 2.70 LINK OE1 GLU A 83 CA CA A 203 1555 1555 2.58 LINK OE2 GLU A 83 CA CA A 203 1555 1555 2.36 LINK CA CA A 202 O HOH A 354 1555 1555 2.32 LINK CA CA A 202 O HOH A 429 1555 1555 2.44 LINK CA CA A 202 O HOH A 454 1555 1555 2.42 LINK CA CA A 202 O HOH B 461 1555 1554 2.37 LINK CA CA A 203 O HOH A 310 1555 1555 2.14 LINK CA CA A 203 O HOH A 341 1555 1555 2.38 LINK CA CA A 203 O PHE B 40 2557 1555 2.40 LINK CA CA A 203 O HOH B 324 1555 2557 2.50 LINK CA CA A 203 O HOH B 327 1555 1555 2.16 LINK CA CA A 203 O HOH B 580 1555 2557 2.70 LINK CA CA A 204 O HOH A 327 1555 1555 2.35 LINK CA CA A 204 O HOH A 374 1555 1555 2.48 LINK CA CA A 204 O HOH A 424 1555 1555 2.47 LINK CA CA A 204 O HOH A 510 1555 1555 2.40 LINK CA CA A 204 O4 GLC C 1 1555 1555 2.44 LINK CA CA A 205 O HOH A 377 1555 1555 2.51 LINK CA CA A 205 O HOH A 423 1555 1555 2.26 LINK CA CA A 205 O HOH A 448 1555 1555 2.98 LINK CA CA A 205 O HOH A 459 1555 1555 2.46 LINK O HOH A 314 CA CA B 204 2557 1555 2.56 LINK O HOH A 329 CA CA B 204 2557 1555 2.49 LINK O HOH A 352 CA CA B 204 2557 1555 2.39 LINK O HOH A 360 CA CA B 202 2557 1555 2.39 LINK O HOH A 422 CA CA B 203 1555 1555 2.52 LINK O HOH A 442 CA CA B 203 1555 1555 2.39 LINK O HOH A 458 CA CA B 202 2557 1555 2.60 LINK O AHOH A 478 CA CA B 202 1555 1555 2.54 LINK O BHOH A 478 CA CA B 202 1555 1555 2.90 LINK O HOH A 527 CA CA B 202 1555 1555 2.41 LINK O HOH A 539 CA CA B 203 1555 1555 2.38 LINK OE2 GLU B 18 CA CA B 201 1555 1555 2.25 LINK OD1 ASN B 39 CA CA B 204 1555 1555 2.36 LINK O ASN B 53 CA CA B 201 1555 1555 2.39 LINK OD1 ASN B 55 CA CA B 201 1555 1555 2.44 LINK OXT LYS B 157 CA CA B 202 1555 1555 2.29 LINK CA CA B 201 O HOH B 335 1555 1555 2.36 LINK CA CA B 201 O HOH B 446 1555 1555 2.55 LINK CA CA B 201 O HOH B 495 1555 1555 2.39 LINK CA CA B 201 O HOH B 512 1555 1555 2.38 LINK CA CA B 202 O HOH B 487 1555 1555 2.54 LINK CA CA B 202 O HOH B 507 1555 1555 2.38 LINK CA CA B 203 O HOH B 364 1555 1555 2.52 LINK CA CA B 203 O HOH B 422 1555 1555 2.45 LINK CA CA B 203 O HOH B 474 1555 1555 2.51 LINK CA CA B 203 O BHOH B 619 1555 1555 2.41 LINK CA CA B 203 O AHOH B 619 1555 1555 2.56 LINK CA CA B 203 O HOH B 628 1555 1555 2.41 LINK CA CA B 204 O HOH B 407 1555 1555 2.63 LINK CA CA B 204 O HOH B 486 1555 1555 3.19 LINK CA CA B 204 O HOH B 564 1555 1555 2.07 CRYST1 140.001 53.954 46.023 90.00 105.19 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007143 0.000000 0.001939 0.00000 SCALE2 0.000000 0.018534 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022515 0.00000