data_5F5G # _entry.id 5F5G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5F5G WWPDB D_1000216053 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5F5B PDB . unspecified 5F5D PDB . unspecified 5F5J PDB . unspecified 5F5K PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5F5G _pdbx_database_status.recvd_initial_deposition_date 2015-12-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Urban, S.' 1 'Cho, S.' 2 'Dickey, S.W.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 61 _citation.language ? _citation.page_first 329 _citation.page_last 340 _citation.title ;Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2015.12.022 _citation.pdbx_database_id_PubMed 26805573 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cho, S.' 1 primary 'Dickey, S.W.' 2 primary 'Urban, S.' 3 # _cell.entry_id 5F5G _cell.length_a 70.830 _cell.length_b 97.500 _cell.length_c 62.790 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F5G _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Rhomboid protease GlpG' 23800.133 1 3.4.21.105 Y205F 'UNP residues 87-276' ? 2 polymer syn ACE-ARG-MET-ALA-aldehyde 387.521 1 ? 'Acetylation at N-terminus and functional aldehyde at C-terminus' ? ? 3 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Intramembrane serine protease' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMH FSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVFALMGYVWLRGERDPQSGIYL QRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK ; ;MGSSHHHHHHSSGLVPRGSHMAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMH FSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVFALMGYVWLRGERDPQSGIYL QRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK ; A ? 2 'polypeptide(L)' no yes '(ACE)RM(5XU)' XRMX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 ALA n 1 24 LEU n 1 25 ARG n 1 26 GLU n 1 27 ARG n 1 28 ALA n 1 29 GLY n 1 30 PRO n 1 31 VAL n 1 32 THR n 1 33 TRP n 1 34 VAL n 1 35 MET n 1 36 MET n 1 37 ILE n 1 38 ALA n 1 39 CYS n 1 40 VAL n 1 41 VAL n 1 42 VAL n 1 43 PHE n 1 44 ILE n 1 45 ALA n 1 46 MET n 1 47 GLN n 1 48 ILE n 1 49 LEU n 1 50 GLY n 1 51 ASP n 1 52 GLN n 1 53 GLU n 1 54 VAL n 1 55 MET n 1 56 LEU n 1 57 TRP n 1 58 LEU n 1 59 ALA n 1 60 TRP n 1 61 PRO n 1 62 PHE n 1 63 ASP n 1 64 PRO n 1 65 THR n 1 66 LEU n 1 67 LYS n 1 68 PHE n 1 69 GLU n 1 70 PHE n 1 71 TRP n 1 72 ARG n 1 73 TYR n 1 74 PHE n 1 75 THR n 1 76 HIS n 1 77 ALA n 1 78 LEU n 1 79 MET n 1 80 HIS n 1 81 PHE n 1 82 SER n 1 83 LEU n 1 84 MET n 1 85 HIS n 1 86 ILE n 1 87 LEU n 1 88 PHE n 1 89 ASN n 1 90 LEU n 1 91 LEU n 1 92 TRP n 1 93 TRP n 1 94 TRP n 1 95 TYR n 1 96 LEU n 1 97 GLY n 1 98 GLY n 1 99 ALA n 1 100 VAL n 1 101 GLU n 1 102 LYS n 1 103 ARG n 1 104 LEU n 1 105 GLY n 1 106 SER n 1 107 GLY n 1 108 LYS n 1 109 LEU n 1 110 ILE n 1 111 VAL n 1 112 ILE n 1 113 THR n 1 114 LEU n 1 115 ILE n 1 116 SER n 1 117 ALA n 1 118 LEU n 1 119 LEU n 1 120 SER n 1 121 GLY n 1 122 TYR n 1 123 VAL n 1 124 GLN n 1 125 GLN n 1 126 LYS n 1 127 PHE n 1 128 SER n 1 129 GLY n 1 130 PRO n 1 131 TRP n 1 132 PHE n 1 133 GLY n 1 134 GLY n 1 135 LEU n 1 136 SER n 1 137 GLY n 1 138 VAL n 1 139 VAL n 1 140 PHE n 1 141 ALA n 1 142 LEU n 1 143 MET n 1 144 GLY n 1 145 TYR n 1 146 VAL n 1 147 TRP n 1 148 LEU n 1 149 ARG n 1 150 GLY n 1 151 GLU n 1 152 ARG n 1 153 ASP n 1 154 PRO n 1 155 GLN n 1 156 SER n 1 157 GLY n 1 158 ILE n 1 159 TYR n 1 160 LEU n 1 161 GLN n 1 162 ARG n 1 163 GLY n 1 164 LEU n 1 165 ILE n 1 166 ILE n 1 167 PHE n 1 168 ALA n 1 169 LEU n 1 170 ILE n 1 171 TRP n 1 172 ILE n 1 173 VAL n 1 174 ALA n 1 175 GLY n 1 176 TRP n 1 177 PHE n 1 178 ASP n 1 179 LEU n 1 180 PHE n 1 181 GLY n 1 182 MET n 1 183 SER n 1 184 MET n 1 185 ALA n 1 186 ASN n 1 187 GLY n 1 188 ALA n 1 189 HIS n 1 190 ILE n 1 191 ALA n 1 192 GLY n 1 193 LEU n 1 194 ALA n 1 195 VAL n 1 196 GLY n 1 197 LEU n 1 198 ALA n 1 199 MET n 1 200 ALA n 1 201 PHE n 1 202 VAL n 1 203 ASP n 1 204 SER n 1 205 LEU n 1 206 ASN n 1 207 ALA n 1 208 ARG n 1 209 LYS n 1 210 ARG n 1 211 LYS n 2 1 ACE n 2 2 ARG n 2 3 MET n 2 4 5XU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 211 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'glpG, APT88_21985, SK83_00858' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(C43)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'Drosophila melanogaster' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 7227 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A0J2E248_ECOLX A0A0J2E248 ? 1 ;AALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVE KRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFG MSMANGAHIAGLAVGLAMAFVDSLNARKRK ; 87 2 PDB 5F5G 5F5G ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5F5G A 22 ? 211 ? A0A0J2E248 87 ? 276 ? 87 276 2 2 5F5G B 1 ? 4 ? 5F5G 500 ? 503 ? 500 503 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5F5G MET A 1 ? UNP A0A0J2E248 ? ? 'initiating methionine' 66 1 1 5F5G GLY A 2 ? UNP A0A0J2E248 ? ? 'expression tag' 67 2 1 5F5G SER A 3 ? UNP A0A0J2E248 ? ? 'expression tag' 68 3 1 5F5G SER A 4 ? UNP A0A0J2E248 ? ? 'expression tag' 69 4 1 5F5G HIS A 5 ? UNP A0A0J2E248 ? ? 'expression tag' 70 5 1 5F5G HIS A 6 ? UNP A0A0J2E248 ? ? 'expression tag' 71 6 1 5F5G HIS A 7 ? UNP A0A0J2E248 ? ? 'expression tag' 72 7 1 5F5G HIS A 8 ? UNP A0A0J2E248 ? ? 'expression tag' 73 8 1 5F5G HIS A 9 ? UNP A0A0J2E248 ? ? 'expression tag' 74 9 1 5F5G HIS A 10 ? UNP A0A0J2E248 ? ? 'expression tag' 75 10 1 5F5G SER A 11 ? UNP A0A0J2E248 ? ? 'expression tag' 76 11 1 5F5G SER A 12 ? UNP A0A0J2E248 ? ? 'expression tag' 77 12 1 5F5G GLY A 13 ? UNP A0A0J2E248 ? ? 'expression tag' 78 13 1 5F5G LEU A 14 ? UNP A0A0J2E248 ? ? 'expression tag' 79 14 1 5F5G VAL A 15 ? UNP A0A0J2E248 ? ? 'expression tag' 80 15 1 5F5G PRO A 16 ? UNP A0A0J2E248 ? ? 'expression tag' 81 16 1 5F5G ARG A 17 ? UNP A0A0J2E248 ? ? 'expression tag' 82 17 1 5F5G GLY A 18 ? UNP A0A0J2E248 ? ? 'expression tag' 83 18 1 5F5G SER A 19 ? UNP A0A0J2E248 ? ? 'expression tag' 84 19 1 5F5G HIS A 20 ? UNP A0A0J2E248 ? ? 'expression tag' 85 20 1 5F5G MET A 21 ? UNP A0A0J2E248 ? ? 'expression tag' 86 21 1 5F5G PHE A 140 ? UNP A0A0J2E248 TYR 205 'engineered mutation' 205 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5XU 'L-peptide linking' n '(2~{S})-2-azanylpropanal' Ala-aldehyde 'C3 H7 N O' 73.094 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5F5G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;2.5M NaCl, 0.1M sodium acetate pH 4.5, 5% Glycerol, 7% DMPC/CHAPSO bicelle ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.981 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.981 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_synchrotron_site CHESS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5F5G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 50.01 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10422 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5F5G _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8510 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.01 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 89.36 _refine.ls_R_factor_obs 0.20911 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20676 _refine.ls_R_factor_R_free 0.25476 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 418 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 46.943 _refine.aniso_B[1][1] 6.44 _refine.aniso_B[2][2] -2.58 _refine.aniso_B[3][3] -3.86 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.387 _refine.pdbx_overall_ESU_R_Free 0.259 _refine.overall_SU_ML 0.255 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.609 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1468 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1498 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 50.01 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 1516 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.485 1.921 ? 2059 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.710 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.900 21.864 ? 59 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.779 15.000 ? 237 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.513 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 221 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 1131 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.379 4.436 ? 737 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 5.363 6.641 ? 918 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.578 4.866 ? 779 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined 11.093 41.954 ? 6552 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 647 _refine_ls_shell.R_factor_R_work 0.306 _refine_ls_shell.percent_reflns_obs 91.98 _refine_ls_shell.R_factor_R_free 0.298 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5F5G _struct.title 'Structure of E.Coli GlpG Y205F mutant complexed with peptidic inhibitor Ac-RMA-CHO in the DMPC/CHAPSO bicelle' _struct.pdbx_descriptor 'Rhomboid protease GlpG (E.C.3.4.21.105), ACE-ARG-MET-ALA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5F5G _struct_keywords.text 'GlpG, Rhomboid, intramembrane protease, Bicelle, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 29 ? GLY A 50 ? GLY A 94 GLY A 115 1 ? 22 HELX_P HELX_P2 AA2 GLY A 50 ? ALA A 59 ? GLY A 115 ALA A 124 1 ? 10 HELX_P HELX_P3 AA3 ASP A 63 ? LYS A 67 ? ASP A 128 LYS A 132 5 ? 5 HELX_P HELX_P4 AA4 TRP A 71 ? HIS A 76 ? TRP A 136 HIS A 141 1 ? 6 HELX_P HELX_P5 AA5 ALA A 77 ? MET A 79 ? ALA A 142 MET A 144 5 ? 3 HELX_P HELX_P6 AA6 SER A 82 ? GLY A 105 ? SER A 147 GLY A 170 1 ? 24 HELX_P HELX_P7 AA7 GLY A 105 ? GLY A 129 ? GLY A 170 GLY A 194 1 ? 25 HELX_P HELX_P8 AA8 LEU A 135 ? ASP A 153 ? LEU A 200 ASP A 218 1 ? 19 HELX_P HELX_P9 AA9 PRO A 154 ? GLY A 157 ? PRO A 219 GLY A 222 5 ? 4 HELX_P HELX_P10 AB1 GLN A 161 ? PHE A 177 ? GLN A 226 PHE A 242 1 ? 17 HELX_P HELX_P11 AB2 ASP A 178 ? MET A 182 ? ASP A 243 MET A 247 5 ? 5 HELX_P HELX_P12 AB3 ALA A 185 ? ALA A 207 ? ALA A 250 ALA A 272 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? B ACE 1 C ? ? ? 1_555 B ARG 2 N ? ? B ACE 500 B ARG 501 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale one ? B MET 3 C ? ? ? 1_555 B 5XU 4 N ? ? B MET 502 B 5XU 503 1_555 ? ? ? ? ? ? ? 1.309 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 132 ? GLY A 133 ? PHE A 197 GLY A 198 AA1 2 ARG B 2 ? MET B 3 ? ARG B 501 MET B 502 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id GLY _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 133 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 198 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ARG _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 2 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 501 # _atom_sites.entry_id 5F5G _atom_sites.fract_transf_matrix[1][1] 0.014118 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010256 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015926 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 66 ? ? ? A . n A 1 2 GLY 2 67 ? ? ? A . n A 1 3 SER 3 68 ? ? ? A . n A 1 4 SER 4 69 ? ? ? A . n A 1 5 HIS 5 70 ? ? ? A . n A 1 6 HIS 6 71 ? ? ? A . n A 1 7 HIS 7 72 ? ? ? A . n A 1 8 HIS 8 73 ? ? ? A . n A 1 9 HIS 9 74 ? ? ? A . n A 1 10 HIS 10 75 ? ? ? A . n A 1 11 SER 11 76 ? ? ? A . n A 1 12 SER 12 77 ? ? ? A . n A 1 13 GLY 13 78 ? ? ? A . n A 1 14 LEU 14 79 ? ? ? A . n A 1 15 VAL 15 80 ? ? ? A . n A 1 16 PRO 16 81 ? ? ? A . n A 1 17 ARG 17 82 ? ? ? A . n A 1 18 GLY 18 83 ? ? ? A . n A 1 19 SER 19 84 ? ? ? A . n A 1 20 HIS 20 85 ? ? ? A . n A 1 21 MET 21 86 ? ? ? A . n A 1 22 ALA 22 87 ? ? ? A . n A 1 23 ALA 23 88 ? ? ? A . n A 1 24 LEU 24 89 ? ? ? A . n A 1 25 ARG 25 90 ? ? ? A . n A 1 26 GLU 26 91 ? ? ? A . n A 1 27 ARG 27 92 92 ARG ARG A . n A 1 28 ALA 28 93 93 ALA ALA A . n A 1 29 GLY 29 94 94 GLY GLY A . n A 1 30 PRO 30 95 95 PRO PRO A . n A 1 31 VAL 31 96 96 VAL VAL A . n A 1 32 THR 32 97 97 THR THR A . n A 1 33 TRP 33 98 98 TRP TRP A . n A 1 34 VAL 34 99 99 VAL VAL A . n A 1 35 MET 35 100 100 MET MET A . n A 1 36 MET 36 101 101 MET MET A . n A 1 37 ILE 37 102 102 ILE ILE A . n A 1 38 ALA 38 103 103 ALA ALA A . n A 1 39 CYS 39 104 104 CYS CYS A . n A 1 40 VAL 40 105 105 VAL VAL A . n A 1 41 VAL 41 106 106 VAL VAL A . n A 1 42 VAL 42 107 107 VAL VAL A . n A 1 43 PHE 43 108 108 PHE PHE A . n A 1 44 ILE 44 109 109 ILE ILE A . n A 1 45 ALA 45 110 110 ALA ALA A . n A 1 46 MET 46 111 111 MET MET A . n A 1 47 GLN 47 112 112 GLN GLN A . n A 1 48 ILE 48 113 113 ILE ILE A . n A 1 49 LEU 49 114 114 LEU LEU A . n A 1 50 GLY 50 115 115 GLY GLY A . n A 1 51 ASP 51 116 116 ASP ASP A . n A 1 52 GLN 52 117 117 GLN GLN A . n A 1 53 GLU 53 118 118 GLU GLU A . n A 1 54 VAL 54 119 119 VAL VAL A . n A 1 55 MET 55 120 120 MET MET A . n A 1 56 LEU 56 121 121 LEU LEU A . n A 1 57 TRP 57 122 122 TRP TRP A . n A 1 58 LEU 58 123 123 LEU LEU A . n A 1 59 ALA 59 124 124 ALA ALA A . n A 1 60 TRP 60 125 125 TRP TRP A . n A 1 61 PRO 61 126 126 PRO PRO A . n A 1 62 PHE 62 127 127 PHE PHE A . n A 1 63 ASP 63 128 128 ASP ASP A . n A 1 64 PRO 64 129 129 PRO PRO A . n A 1 65 THR 65 130 130 THR THR A . n A 1 66 LEU 66 131 131 LEU LEU A . n A 1 67 LYS 67 132 132 LYS LYS A . n A 1 68 PHE 68 133 133 PHE PHE A . n A 1 69 GLU 69 134 134 GLU GLU A . n A 1 70 PHE 70 135 135 PHE PHE A . n A 1 71 TRP 71 136 136 TRP TRP A . n A 1 72 ARG 72 137 137 ARG ARG A . n A 1 73 TYR 73 138 138 TYR TYR A . n A 1 74 PHE 74 139 139 PHE PHE A . n A 1 75 THR 75 140 140 THR THR A . n A 1 76 HIS 76 141 141 HIS HIS A . n A 1 77 ALA 77 142 142 ALA ALA A . n A 1 78 LEU 78 143 143 LEU LEU A . n A 1 79 MET 79 144 144 MET MET A . n A 1 80 HIS 80 145 145 HIS HIS A . n A 1 81 PHE 81 146 146 PHE PHE A . n A 1 82 SER 82 147 147 SER SER A . n A 1 83 LEU 83 148 148 LEU LEU A . n A 1 84 MET 84 149 149 MET MET A . n A 1 85 HIS 85 150 150 HIS HIS A . n A 1 86 ILE 86 151 151 ILE ILE A . n A 1 87 LEU 87 152 152 LEU LEU A . n A 1 88 PHE 88 153 153 PHE PHE A . n A 1 89 ASN 89 154 154 ASN ASN A . n A 1 90 LEU 90 155 155 LEU LEU A . n A 1 91 LEU 91 156 156 LEU LEU A . n A 1 92 TRP 92 157 157 TRP TRP A . n A 1 93 TRP 93 158 158 TRP TRP A . n A 1 94 TRP 94 159 159 TRP TRP A . n A 1 95 TYR 95 160 160 TYR TYR A . n A 1 96 LEU 96 161 161 LEU LEU A . n A 1 97 GLY 97 162 162 GLY GLY A . n A 1 98 GLY 98 163 163 GLY GLY A . n A 1 99 ALA 99 164 164 ALA ALA A . n A 1 100 VAL 100 165 165 VAL VAL A . n A 1 101 GLU 101 166 166 GLU GLU A . n A 1 102 LYS 102 167 167 LYS LYS A . n A 1 103 ARG 103 168 168 ARG ARG A . n A 1 104 LEU 104 169 169 LEU LEU A . n A 1 105 GLY 105 170 170 GLY GLY A . n A 1 106 SER 106 171 171 SER SER A . n A 1 107 GLY 107 172 172 GLY GLY A . n A 1 108 LYS 108 173 173 LYS LYS A . n A 1 109 LEU 109 174 174 LEU LEU A . n A 1 110 ILE 110 175 175 ILE ILE A . n A 1 111 VAL 111 176 176 VAL VAL A . n A 1 112 ILE 112 177 177 ILE ILE A . n A 1 113 THR 113 178 178 THR THR A . n A 1 114 LEU 114 179 179 LEU LEU A . n A 1 115 ILE 115 180 180 ILE ILE A . n A 1 116 SER 116 181 181 SER SER A . n A 1 117 ALA 117 182 182 ALA ALA A . n A 1 118 LEU 118 183 183 LEU LEU A . n A 1 119 LEU 119 184 184 LEU LEU A . n A 1 120 SER 120 185 185 SER SER A . n A 1 121 GLY 121 186 186 GLY GLY A . n A 1 122 TYR 122 187 187 TYR TYR A . n A 1 123 VAL 123 188 188 VAL VAL A . n A 1 124 GLN 124 189 189 GLN GLN A . n A 1 125 GLN 125 190 190 GLN GLN A . n A 1 126 LYS 126 191 191 LYS LYS A . n A 1 127 PHE 127 192 192 PHE PHE A . n A 1 128 SER 128 193 193 SER SER A . n A 1 129 GLY 129 194 194 GLY GLY A . n A 1 130 PRO 130 195 195 PRO PRO A . n A 1 131 TRP 131 196 196 TRP TRP A . n A 1 132 PHE 132 197 197 PHE PHE A . n A 1 133 GLY 133 198 198 GLY GLY A . n A 1 134 GLY 134 199 199 GLY GLY A . n A 1 135 LEU 135 200 200 LEU LEU A . n A 1 136 SER 136 201 201 SER SER A . n A 1 137 GLY 137 202 202 GLY GLY A . n A 1 138 VAL 138 203 203 VAL VAL A . n A 1 139 VAL 139 204 204 VAL VAL A . n A 1 140 PHE 140 205 205 PHE PHE A . n A 1 141 ALA 141 206 206 ALA ALA A . n A 1 142 LEU 142 207 207 LEU LEU A . n A 1 143 MET 143 208 208 MET MET A . n A 1 144 GLY 144 209 209 GLY GLY A . n A 1 145 TYR 145 210 210 TYR TYR A . n A 1 146 VAL 146 211 211 VAL VAL A . n A 1 147 TRP 147 212 212 TRP TRP A . n A 1 148 LEU 148 213 213 LEU LEU A . n A 1 149 ARG 149 214 214 ARG ARG A . n A 1 150 GLY 150 215 215 GLY GLY A . n A 1 151 GLU 151 216 216 GLU GLU A . n A 1 152 ARG 152 217 217 ARG ARG A . n A 1 153 ASP 153 218 218 ASP ASP A . n A 1 154 PRO 154 219 219 PRO PRO A . n A 1 155 GLN 155 220 220 GLN GLN A . n A 1 156 SER 156 221 221 SER SER A . n A 1 157 GLY 157 222 222 GLY GLY A . n A 1 158 ILE 158 223 223 ILE ILE A . n A 1 159 TYR 159 224 224 TYR TYR A . n A 1 160 LEU 160 225 225 LEU LEU A . n A 1 161 GLN 161 226 226 GLN GLN A . n A 1 162 ARG 162 227 227 ARG ARG A . n A 1 163 GLY 163 228 228 GLY GLY A . n A 1 164 LEU 164 229 229 LEU LEU A . n A 1 165 ILE 165 230 230 ILE ILE A . n A 1 166 ILE 166 231 231 ILE ILE A . n A 1 167 PHE 167 232 232 PHE PHE A . n A 1 168 ALA 168 233 233 ALA ALA A . n A 1 169 LEU 169 234 234 LEU LEU A . n A 1 170 ILE 170 235 235 ILE ILE A . n A 1 171 TRP 171 236 236 TRP TRP A . n A 1 172 ILE 172 237 237 ILE ILE A . n A 1 173 VAL 173 238 238 VAL VAL A . n A 1 174 ALA 174 239 239 ALA ALA A . n A 1 175 GLY 175 240 240 GLY GLY A . n A 1 176 TRP 176 241 241 TRP TRP A . n A 1 177 PHE 177 242 242 PHE PHE A . n A 1 178 ASP 178 243 243 ASP ASP A . n A 1 179 LEU 179 244 244 LEU LEU A . n A 1 180 PHE 180 245 245 PHE PHE A . n A 1 181 GLY 181 246 246 GLY GLY A . n A 1 182 MET 182 247 247 MET MET A . n A 1 183 SER 183 248 248 SER SER A . n A 1 184 MET 184 249 249 MET MET A . n A 1 185 ALA 185 250 250 ALA ALA A . n A 1 186 ASN 186 251 251 ASN ASN A . n A 1 187 GLY 187 252 252 GLY GLY A . n A 1 188 ALA 188 253 253 ALA ALA A . n A 1 189 HIS 189 254 254 HIS HIS A . n A 1 190 ILE 190 255 255 ILE ILE A . n A 1 191 ALA 191 256 256 ALA ALA A . n A 1 192 GLY 192 257 257 GLY GLY A . n A 1 193 LEU 193 258 258 LEU LEU A . n A 1 194 ALA 194 259 259 ALA ALA A . n A 1 195 VAL 195 260 260 VAL VAL A . n A 1 196 GLY 196 261 261 GLY GLY A . n A 1 197 LEU 197 262 262 LEU LEU A . n A 1 198 ALA 198 263 263 ALA ALA A . n A 1 199 MET 199 264 264 MET MET A . n A 1 200 ALA 200 265 265 ALA ALA A . n A 1 201 PHE 201 266 266 PHE PHE A . n A 1 202 VAL 202 267 267 VAL VAL A . n A 1 203 ASP 203 268 268 ASP ASP A . n A 1 204 SER 204 269 269 SER SER A . n A 1 205 LEU 205 270 270 LEU LEU A . n A 1 206 ASN 206 271 271 ASN ASN A . n A 1 207 ALA 207 272 272 ALA ALA A . n A 1 208 ARG 208 273 ? ? ? A . n A 1 209 LYS 209 274 ? ? ? A . n A 1 210 ARG 210 275 ? ? ? A . n A 1 211 LYS 211 276 ? ? ? A . n B 2 1 ACE 1 500 500 ACE ACE B . n B 2 2 ARG 2 501 501 ARG ARG B . n B 2 3 MET 3 502 502 MET MET B . n B 2 4 5XU 4 503 503 5XU ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 515 HOH HOH A . C 3 HOH 2 302 506 HOH HOH A . C 3 HOH 3 303 516 HOH HOH A . C 3 HOH 4 304 519 HOH HOH A . C 3 HOH 5 305 518 HOH HOH A . C 3 HOH 6 306 502 HOH HOH A . C 3 HOH 7 307 514 HOH HOH A . C 3 HOH 8 308 525 HOH HOH A . C 3 HOH 9 309 508 HOH HOH A . C 3 HOH 10 310 513 HOH HOH A . C 3 HOH 11 311 529 HOH HOH A . C 3 HOH 12 312 520 HOH HOH A . C 3 HOH 13 313 512 HOH HOH A . C 3 HOH 14 314 522 HOH HOH A . C 3 HOH 15 315 523 HOH HOH A . C 3 HOH 16 316 521 HOH HOH A . C 3 HOH 17 317 517 HOH HOH A . C 3 HOH 18 318 526 HOH HOH A . C 3 HOH 19 319 524 HOH HOH A . C 3 HOH 20 320 527 HOH HOH A . C 3 HOH 21 321 500 HOH HOH A . C 3 HOH 22 322 507 HOH HOH A . C 3 HOH 23 323 528 HOH HOH A . C 3 HOH 24 324 504 HOH HOH A . C 3 HOH 25 325 503 HOH HOH A . C 3 HOH 26 326 505 HOH HOH A . C 3 HOH 27 327 510 HOH HOH A . C 3 HOH 28 328 501 HOH HOH A . C 3 HOH 29 329 511 HOH HOH A . C 3 HOH 30 330 509 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1090 ? 1 MORE -4 ? 1 'SSA (A^2)' 9160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2016-04-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG A SER 201 ? ? C B 5XU 503 ? ? 1.62 2 1 OG A SER 201 ? ? CA B 5XU 503 ? ? 2.10 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 306 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 306 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_554 _pdbx_validate_symm_contact.dist 2.08 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 93 ? ? -101.20 52.11 2 1 TRP A 125 ? ? -37.31 137.95 3 1 LEU A 156 ? ? -48.40 -70.45 4 1 SER A 193 ? ? -147.51 10.96 5 1 ASP A 218 ? ? -146.34 58.44 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 330 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 8.17 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 66 ? A MET 1 2 1 Y 1 A GLY 67 ? A GLY 2 3 1 Y 1 A SER 68 ? A SER 3 4 1 Y 1 A SER 69 ? A SER 4 5 1 Y 1 A HIS 70 ? A HIS 5 6 1 Y 1 A HIS 71 ? A HIS 6 7 1 Y 1 A HIS 72 ? A HIS 7 8 1 Y 1 A HIS 73 ? A HIS 8 9 1 Y 1 A HIS 74 ? A HIS 9 10 1 Y 1 A HIS 75 ? A HIS 10 11 1 Y 1 A SER 76 ? A SER 11 12 1 Y 1 A SER 77 ? A SER 12 13 1 Y 1 A GLY 78 ? A GLY 13 14 1 Y 1 A LEU 79 ? A LEU 14 15 1 Y 1 A VAL 80 ? A VAL 15 16 1 Y 1 A PRO 81 ? A PRO 16 17 1 Y 1 A ARG 82 ? A ARG 17 18 1 Y 1 A GLY 83 ? A GLY 18 19 1 Y 1 A SER 84 ? A SER 19 20 1 Y 1 A HIS 85 ? A HIS 20 21 1 Y 1 A MET 86 ? A MET 21 22 1 Y 1 A ALA 87 ? A ALA 22 23 1 Y 1 A ALA 88 ? A ALA 23 24 1 Y 1 A LEU 89 ? A LEU 24 25 1 Y 1 A ARG 90 ? A ARG 25 26 1 Y 1 A GLU 91 ? A GLU 26 27 1 Y 1 A ARG 273 ? A ARG 208 28 1 Y 1 A LYS 274 ? A LYS 209 29 1 Y 1 A ARG 275 ? A ARG 210 30 1 Y 1 A LYS 276 ? A LYS 211 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #