HEADER TRANSFERASE 09-DEC-15 5F8B
TITLE CRYSTALLOGRAPHIC STRUCTURE OF PSOE WITH CO
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE, PUTATIVE;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA (STRAIN ATCC MYA-4609 /
SOURCE 3 AF293 / CBS 101355 / FGSC A1100);
SOURCE 4 ORGANISM_TAXID: 330879;
SOURCE 5 STRAIN: ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100;
SOURCE 6 GENE: AFUA_8G00580;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS GST, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.HARA,H.HASHIMOTO,T.YAMAMOTO,Y.TSUNEMATSU,K.WATANABE
REVDAT 3 20-MAR-24 5F8B 1 REMARK
REVDAT 2 05-JUL-17 5F8B 1 JRNL
REVDAT 1 20-APR-16 5F8B 0
JRNL AUTH T.YAMAMOTO,Y.TSUNEMATSU,K.HARA,T.SUZUKI,S.KISHIMOTO,
JRNL AUTH 2 H.KAWAGISHI,H.NOGUCHI,H.HASHIMOTO,Y.TANG,K.HOTTA,K.WATANABE
JRNL TITL OXIDATIVE TRANS TO CIS ISOMERIZATION OF OLEFINS IN
JRNL TITL 2 POLYKETIDE BIOSYNTHESIS.
JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 55 6207 2016
JRNL REFN ESSN 1521-3773
JRNL PMID 27072782
JRNL DOI 10.1002/ANIE.201600940
REMARK 2
REMARK 2 RESOLUTION. 2.54 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.9_1692
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.63
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 3 NUMBER OF REFLECTIONS : 21200
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.197
REMARK 3 R VALUE (WORKING SET) : 0.191
REMARK 3 FREE R VALUE : 0.247
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930
REMARK 3 FREE R VALUE TEST SET COUNT : 2106
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 43.6323 - 6.2581 0.97 1261 133 0.1507 0.2119
REMARK 3 2 6.2581 - 4.9695 1.00 1278 134 0.1525 0.1737
REMARK 3 3 4.9695 - 4.3420 1.00 1281 138 0.1421 0.2099
REMARK 3 4 4.3420 - 3.9453 1.00 1274 144 0.1664 0.2196
REMARK 3 5 3.9453 - 3.6627 1.00 1281 144 0.1873 0.2438
REMARK 3 6 3.6627 - 3.4468 1.00 1251 137 0.1857 0.2063
REMARK 3 7 3.4468 - 3.2742 1.00 1278 147 0.2154 0.2751
REMARK 3 8 3.2742 - 3.1318 1.00 1281 140 0.2279 0.3240
REMARK 3 9 3.1318 - 3.0112 1.00 1257 139 0.2553 0.2983
REMARK 3 10 3.0112 - 2.9073 1.00 1283 141 0.2526 0.3269
REMARK 3 11 2.9073 - 2.8164 1.00 1279 138 0.2441 0.2919
REMARK 3 12 2.8164 - 2.7360 1.00 1288 149 0.2508 0.3282
REMARK 3 13 2.7360 - 2.6639 1.00 1259 140 0.2637 0.3039
REMARK 3 14 2.6639 - 2.5990 1.00 1272 145 0.2863 0.3598
REMARK 3 15 2.5990 - 2.5399 1.00 1271 137 0.2854 0.3506
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.710
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.015 1821
REMARK 3 ANGLE : 1.823 2473
REMARK 3 CHIRALITY : 0.064 272
REMARK 3 PLANARITY : 0.007 321
REMARK 3 DIHEDRAL : 17.001 681
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5F8B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-DEC-15.
REMARK 100 THE DEPOSITION ID IS D_1000215467.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-JUN-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PHOTON FACTORY
REMARK 200 BEAMLINE : AR-NW12A
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21207
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 11.57
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.3800
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 58.94
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PEGMME 5000, VAPOR DIFFUSION, HANGING
REMARK 280 DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/6
REMARK 290 6555 X-Y,X,Z+5/6
REMARK 290 7555 Y,X,-Z+2/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+1/3
REMARK 290 10555 -Y,-X,-Z+1/6
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+5/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.42533
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.21267
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.81900
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.60633
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.03167
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.42533
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 25.21267
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 12.60633
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 37.81900
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 63.03167
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 18080 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 CO CO A 301 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A 412 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 PRO A 216
REMARK 465 GLU A 217
REMARK 465 LYS A 218
REMARK 465 LYS A 219
REMARK 465 PRO A 220
REMARK 465 GLU A 221
REMARK 465 THR A 222
REMARK 465 VAL A 223
REMARK 465 PRO A 224
REMARK 465 LYS A 225
REMARK 465 ASN A 226
REMARK 465 GLY A 227
REMARK 465 ALA A 228
REMARK 465 ALA A 229
REMARK 465 VAL A 230
REMARK 465 ALA A 231
REMARK 465 ILE A 232
REMARK 465 GLU A 233
REMARK 465 ALA A 234
REMARK 465 THR A 235
REMARK 465 GLN A 236
REMARK 465 ALA A 237
REMARK 465 GLY A 238
REMARK 465 HIS A 239
REMARK 465 HIS A 240
REMARK 465 HIS A 241
REMARK 465 HIS A 242
REMARK 465 HIS A 243
REMARK 465 HIS A 244
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HE22 GLN A 108 O4 PZS A 303 1.55
REMARK 500 OE2 GLU A 87 O HOH A 401 1.83
REMARK 500 NH2 ARG A 177 O LEU A 206 2.13
REMARK 500 OH TYR A 119 O ASN A 213 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 OD2 ASP A 57 NZ LYS A 86 8555 2.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 PHE A 62 N - CA - C ANGL. DEV. = -16.5 DEGREES
REMARK 500 GLU A 63 C - N - CA ANGL. DEV. = 15.1 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 57 -46.95 -28.94
REMARK 500 SER A 58 5.31 80.71
REMARK 500 PHE A 170 -42.45 -130.25
REMARK 500 ASP A 207 -63.17 -100.97
REMARK 500 ASN A 213 46.29 -73.71
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 LEU A 61 PHE A 62 144.27
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CO A 301 CO
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 412 O
REMARK 620 2 HOH A 412 O 0.0
REMARK 620 N 1
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residues GSH A 302 and PZS A
REMARK 800 303
DBREF 5F8B A 1 237 UNP Q4WB03 Q4WB03_ASPFU 1 237
SEQADV 5F8B GLY A 238 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 239 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 240 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 241 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 242 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 243 UNP Q4WB03 EXPRESSION TAG
SEQADV 5F8B HIS A 244 UNP Q4WB03 EXPRESSION TAG
SEQRES 1 A 244 MET VAL PHE GLY THR LEU TYR THR PHE PRO GLY ASP GLN
SEQRES 2 A 244 CYS ARG THR ILE ALA ILE LYS ALA VAL ALA LYS ALA ASN
SEQRES 3 A 244 GLY LEU ASP LEU ASP ILE ARG GLU THR PRO ARG THR PRO
SEQRES 4 A 244 ASP HIS LEU SER ILE SER LYS LEU GLY LYS VAL PRO ALA
SEQRES 5 A 244 PHE GLN GLY ALA ASP SER PHE LYS LEU PHE GLU CYS MET
SEQRES 6 A 244 ALA ILE ALA LEU TYR ILE THR SER GLN ASN GLU GLN THR
SEQRES 7 A 244 THR LEU LEU GLY LYS ASP LYS LYS GLU TYR ALA GLU ILE
SEQRES 8 A 244 ILE LYS TRP MET SER PHE PHE ASN THR GLU ILE VAL ILE
SEQRES 9 A 244 LEU MET THR GLN GLN LEU LEU PRO GLN LEU GLY VAL ILE
SEQRES 10 A 244 PRO TYR ASP ARG ASP GLN VAL GLU PHE PHE ALA ASN MET
SEQRES 11 A 244 THR GLN ARG SER VAL ASP VAL VAL GLU GLU TYR LEU GLN
SEQRES 12 A 244 ASP ARG THR PHE LEU VAL GLY ASP GLN LEU SER LEU ALA
SEQRES 13 A 244 ASP LEU PHE CYS ALA GLY ASN ILE SER LEU GLY PHE GLN
SEQRES 14 A 244 PHE PHE TYR GLY LYS ALA TRP ARG GLN GLN ASN PRO ASN
SEQRES 15 A 244 VAL SER ARG TRP TYR GLU MET VAL CYS HIS GLN PRO ILE
SEQRES 16 A 244 TYR ALA ALA VAL THR ASP LYS PHE GLN LEU LEU ASP GLU
SEQRES 17 A 244 PRO LYS LEU THR ASN ASN PRO PRO GLU LYS LYS PRO GLU
SEQRES 18 A 244 THR VAL PRO LYS ASN GLY ALA ALA VAL ALA ILE GLU ALA
SEQRES 19 A 244 THR GLN ALA GLY HIS HIS HIS HIS HIS HIS
HET CO A 301 1
HET GSH A 302 36
HET PZS A 303 53
HETNAM CO COBALT (II) ION
HETNAM GSH GLUTATHIONE
HETNAM PZS (5~{S},8~{S},9~{R})-2-[(~{E})-HEX-1-ENYL]-8-METHOXY-3-
HETNAM 2 PZS METHYL-9-OXIDANYL-8-(PHENYLCARBONYL)-1-OXA-7-
HETNAM 3 PZS AZASPIRO[4.4]NON-2-ENE-4,6-DIONE
FORMUL 2 CO CO 2+
FORMUL 3 GSH C10 H17 N3 O6 S
FORMUL 4 PZS C22 H25 N O6
FORMUL 5 HOH *12(H2 O)
HELIX 1 AA1 THR A 16 ASN A 26 1 11
HELIX 2 AA2 THR A 38 SER A 43 1 6
HELIX 3 AA3 GLU A 63 GLN A 74 1 12
HELIX 4 AA4 ASP A 84 ILE A 102 1 19
HELIX 5 AA5 ILE A 102 LEU A 111 1 10
HELIX 6 AA6 PRO A 112 GLY A 115 5 4
HELIX 7 AA7 ASP A 120 LEU A 142 1 23
HELIX 8 AA8 SER A 154 PHE A 171 1 18
HELIX 9 AA9 GLY A 173 ASN A 180 1 8
HELIX 10 AB1 ASN A 180 HIS A 192 1 13
HELIX 11 AB2 GLN A 193 ALA A 198 1 6
SHEET 1 AA1 4 LEU A 30 ARG A 33 0
SHEET 2 AA1 4 GLY A 4 TYR A 7 1 N LEU A 6 O ASP A 31
SHEET 3 AA1 4 ALA A 52 GLY A 55 -1 O GLN A 54 N THR A 5
SHEET 4 AA1 4 LYS A 60 LEU A 61 -1 O LEU A 61 N PHE A 53
LINK SG2 GSH A 302 C10 PZS A 303 1555 1555 1.78
LINK CO CO A 301 O HOH A 412 1555 1555 2.34
LINK CO CO A 301 O HOH A 412 1555 11654 2.34
CISPEP 1 VAL A 50 PRO A 51 0 0.52
CISPEP 2 PHE A 62 GLU A 63 0 -4.26
SITE 1 AC1 1 HOH A 412
SITE 1 AC2 19 GLN A 13 CYS A 14 ARG A 15 ARG A 37
SITE 2 AC2 19 PRO A 39 LYS A 49 VAL A 50 GLU A 63
SITE 3 AC2 19 CYS A 64 ASN A 99 THR A 100 GLU A 101
SITE 4 AC2 19 ILE A 104 THR A 107 GLN A 108 LEU A 111
SITE 5 AC2 19 ILE A 117 MET A 130 LEU A 166
CRYST1 123.331 123.331 75.638 90.00 90.00 120.00 P 65 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008108 0.004681 0.000000 0.00000
SCALE2 0.000000 0.009363 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013221 0.00000