HEADER IMMUNE SYSTEM 10-DEC-15 5FA2 TITLE CRYSTAL STRUCTURE OF 426C.TM4DELTAV1-3 P120 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GP120; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK293-6E; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ANTIBODY, IMMUNE SYSTEM, HIV-1 EXPDTA X-RAY DIFFRACTION AUTHOR L.SCHARF,P.J.BJORKMAN REVDAT 6 20-NOV-24 5FA2 1 REMARK REVDAT 5 27-SEP-23 5FA2 1 HETSYN LINK REVDAT 4 29-JUL-20 5FA2 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 11-DEC-19 5FA2 1 SOURCE REVDAT 2 27-SEP-17 5FA2 1 REMARK REVDAT 1 06-APR-16 5FA2 0 JRNL AUTH L.SCHARF,A.P.WEST,S.A.SIEVERS,C.CHEN,S.JIANG,H.GAO,M.D.GRAY, JRNL AUTH 2 A.T.MCGUIRE,J.F.SCHEID,M.C.NUSSENZWEIG,L.STAMATATOS, JRNL AUTH 3 P.J.BJORKMAN JRNL TITL STRUCTURAL BASIS FOR GERMLINE ANTIBODY RECOGNITION OF HIV-1 JRNL TITL 2 IMMUNOGENS. JRNL REF ELIFE V. 5 2016 JRNL REFN ESSN 2050-084X JRNL PMID 26997349 JRNL DOI 10.7554/ELIFE.13783 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10PRE_2135 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 70227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8054 - 4.4455 0.97 6362 148 0.1744 0.1761 REMARK 3 2 4.4455 - 3.5295 0.99 6400 148 0.1751 0.2087 REMARK 3 3 3.5295 - 3.0836 0.97 6222 144 0.2018 0.2224 REMARK 3 4 3.0836 - 2.8018 0.98 6287 146 0.2285 0.2863 REMARK 3 5 2.8018 - 2.6011 0.97 6209 144 0.2290 0.2672 REMARK 3 6 2.6011 - 2.4477 0.97 6237 145 0.2312 0.2821 REMARK 3 7 2.4477 - 2.3252 0.98 6245 143 0.2400 0.2877 REMARK 3 8 2.3252 - 2.2240 0.98 6227 144 0.2504 0.2548 REMARK 3 9 2.2240 - 2.1384 0.95 6082 141 0.2818 0.2758 REMARK 3 10 2.1384 - 2.0646 0.97 6218 144 0.3056 0.3732 REMARK 3 11 2.0646 - 2.0000 0.97 6149 142 0.3220 0.3329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 5576 REMARK 3 ANGLE : 1.534 7631 REMARK 3 CHIRALITY : 0.100 925 REMARK 3 PLANARITY : 0.008 963 REMARK 3 DIHEDRAL : 14.752 3348 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91094 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 38.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 46.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 2.59500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3U7Y CHAIN G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE REMARK 280 PH 5.0, 10% (W/V) PEG 6,000, 0.2M SODIUM THIOCYANATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.42550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.95700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.42550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.95700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 823 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 44 REMARK 465 TRP A 45 REMARK 465 LYS A 46 REMARK 465 GLY A 318 REMARK 465 GLY A 319 REMARK 465 SER A 320 REMARK 465 GLY A 321 REMARK 465 SER A 322 REMARK 465 GLY A 323 REMARK 465 PRO A 493 REMARK 465 LEU A 494 REMARK 465 HIS A 495 REMARK 465 HIS A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 VAL B 44 REMARK 465 TRP B 45 REMARK 465 LYS B 46 REMARK 465 GLY B 318 REMARK 465 GLY B 319 REMARK 465 SER B 320 REMARK 465 GLY B 321 REMARK 465 SER B 322 REMARK 465 LYS B 492 REMARK 465 PRO B 493 REMARK 465 LEU B 494 REMARK 465 HIS B 495 REMARK 465 HIS B 496 REMARK 465 HIS B 497 REMARK 465 HIS B 498 REMARK 465 HIS B 499 REMARK 465 HIS B 500 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 47 CG CD OE1 OE2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 GLN A 82 CG CD OE1 NE2 REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 GLN A 88 CG CD OE1 NE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 GLN A 246 CG CD OE1 NE2 REMARK 470 GLU A 267 CG CD OE1 OE2 REMARK 470 ASN A 301 CG OD1 ND2 REMARK 470 LYS A 347 CG CD CE NZ REMARK 470 LYS A 440 CG CD CE NZ REMARK 470 THR A 462 OG1 CG2 REMARK 470 ASP A 463 CG OD1 OD2 REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ASN B 80 CG OD1 ND2 REMARK 470 GLN B 82 CG CD OE1 NE2 REMARK 470 GLN B 88 CG CD OE1 NE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 LYS B 231 CG CD CE NZ REMARK 470 GLN B 246 CG CD OE1 NE2 REMARK 470 GLU B 267 CG CD OE1 OE2 REMARK 470 LYS B 290 CG CD CE NZ REMARK 470 ASN B 301 CG OD1 ND2 REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 HIS B 355 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 446 CG CD CE NZ REMARK 470 ASP B 460 CG OD1 OD2 REMARK 470 THR B 462 OG1 CG2 REMARK 470 ASP B 463 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 432 OG1 FLC A 611 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 211 110.05 -160.17 REMARK 500 GLN A 258 -62.10 73.56 REMARK 500 ASN A 276 103.52 -168.54 REMARK 500 SER A 471 -159.09 -149.92 REMARK 500 GLN B 258 -61.70 73.03 REMARK 500 ASN B 276 103.48 -168.14 REMARK 500 SER B 471 -159.71 -150.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 930 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B 885 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH B 886 DISTANCE = 6.21 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FEC RELATED DB: PDB REMARK 900 RELATED ID: 5I9Q RELATED DB: PDB REMARK 900 RELATED ID: 5IGX RELATED DB: PDB REMARK 900 RELATED ID: 5F7E RELATED DB: PDB DBREF 5FA2 A 44 500 PDB 5FA2 5FA2 44 500 DBREF 5FA2 B 44 500 PDB 5FA2 5FA2 44 500 SEQRES 1 A 353 VAL TRP LYS GLU ALA LYS THR THR LEU PHE CYS ALA SER SEQRES 2 A 353 ASP ALA LYS ALA TYR GLU LYS GLU CYS HIS ASN VAL TRP SEQRES 3 A 353 ALA THR HIS ALA CYS VAL PRO THR ASP PRO ASN PRO GLN SEQRES 4 A 353 GLU VAL VAL LEU GLU GLN VAL THR GLU ASN PHE ASN MET SEQRES 5 A 353 TRP LYS ASN ASP MET VAL ASP GLN MET GLN GLU ASP VAL SEQRES 6 A 353 ILE SER ILE TRP ASP GLN CYS LEU LYS PRO CYS VAL LYS SEQRES 7 A 353 LEU THR ASN THR SER THR LEU THR GLN ALA CYS PRO LYS SEQRES 8 A 353 VAL THR PHE ASP PRO ILE PRO ILE HIS TYR CYS ALA PRO SEQRES 9 A 353 ALA GLY TYR ALA ILE LEU LYS CYS ASN ASN LYS THR PHE SEQRES 10 A 353 ASN GLY LYS GLY PRO CYS ASN ASN VAL SER THR VAL GLN SEQRES 11 A 353 CYS THR HIS GLY ILE LYS PRO VAL VAL SER THR GLN LEU SEQRES 12 A 353 LEU LEU ASN GLY SER LEU ALA GLU GLU GLU ILE VAL ILE SEQRES 13 A 353 ARG SER LYS ASN LEU ARG ASP ASN ALA LYS ILE ILE ILE SEQRES 14 A 353 VAL GLN LEU GLN LYS SER VAL GLU ILE VAL CYS THR ARG SEQRES 15 A 353 PRO ASN ASN GLY GLY SER GLY SER GLY GLY ASP ILE ARG SEQRES 16 A 353 GLN ALA TYR CYS GLN ILE SER GLY ARG ASN TRP SER GLU SEQRES 17 A 353 ALA VAL ASN GLN VAL LYS LYS LYS LEU LYS GLU HIS PHE SEQRES 18 A 353 PRO HIS LYS ASN ILE SER PHE GLN SER SER SER GLY GLY SEQRES 19 A 353 ASP LEU GLU ILE THR THR HIS SER PHE ASN CYS GLY GLY SEQRES 20 A 353 GLU PHE PHE TYR CYS ASN THR SER GLY LEU PHE GLN ASP SEQRES 21 A 353 THR ILE SER ASN ALA THR ILE MET LEU PRO CYS ARG ILE SEQRES 22 A 353 LYS GLN ILE ILE ASN MET TRP GLN GLU VAL GLY LYS ALA SEQRES 23 A 353 ILE TYR ALA PRO PRO ILE LYS GLY GLN ILE THR CYS LYS SEQRES 24 A 353 SER ASP ILE THR GLY LEU LEU LEU LEU ARG ASP GLY GLY SEQRES 25 A 353 ASP THR THR ASP ASN THR GLU ILE PHE ARG PRO SER GLY SEQRES 26 A 353 GLY ASP MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS SEQRES 27 A 353 TYR LYS VAL VAL GLU ILE LYS PRO LEU HIS HIS HIS HIS SEQRES 28 A 353 HIS HIS SEQRES 1 B 353 VAL TRP LYS GLU ALA LYS THR THR LEU PHE CYS ALA SER SEQRES 2 B 353 ASP ALA LYS ALA TYR GLU LYS GLU CYS HIS ASN VAL TRP SEQRES 3 B 353 ALA THR HIS ALA CYS VAL PRO THR ASP PRO ASN PRO GLN SEQRES 4 B 353 GLU VAL VAL LEU GLU GLN VAL THR GLU ASN PHE ASN MET SEQRES 5 B 353 TRP LYS ASN ASP MET VAL ASP GLN MET GLN GLU ASP VAL SEQRES 6 B 353 ILE SER ILE TRP ASP GLN CYS LEU LYS PRO CYS VAL LYS SEQRES 7 B 353 LEU THR ASN THR SER THR LEU THR GLN ALA CYS PRO LYS SEQRES 8 B 353 VAL THR PHE ASP PRO ILE PRO ILE HIS TYR CYS ALA PRO SEQRES 9 B 353 ALA GLY TYR ALA ILE LEU LYS CYS ASN ASN LYS THR PHE SEQRES 10 B 353 ASN GLY LYS GLY PRO CYS ASN ASN VAL SER THR VAL GLN SEQRES 11 B 353 CYS THR HIS GLY ILE LYS PRO VAL VAL SER THR GLN LEU SEQRES 12 B 353 LEU LEU ASN GLY SER LEU ALA GLU GLU GLU ILE VAL ILE SEQRES 13 B 353 ARG SER LYS ASN LEU ARG ASP ASN ALA LYS ILE ILE ILE SEQRES 14 B 353 VAL GLN LEU GLN LYS SER VAL GLU ILE VAL CYS THR ARG SEQRES 15 B 353 PRO ASN ASN GLY GLY SER GLY SER GLY GLY ASP ILE ARG SEQRES 16 B 353 GLN ALA TYR CYS GLN ILE SER GLY ARG ASN TRP SER GLU SEQRES 17 B 353 ALA VAL ASN GLN VAL LYS LYS LYS LEU LYS GLU HIS PHE SEQRES 18 B 353 PRO HIS LYS ASN ILE SER PHE GLN SER SER SER GLY GLY SEQRES 19 B 353 ASP LEU GLU ILE THR THR HIS SER PHE ASN CYS GLY GLY SEQRES 20 B 353 GLU PHE PHE TYR CYS ASN THR SER GLY LEU PHE GLN ASP SEQRES 21 B 353 THR ILE SER ASN ALA THR ILE MET LEU PRO CYS ARG ILE SEQRES 22 B 353 LYS GLN ILE ILE ASN MET TRP GLN GLU VAL GLY LYS ALA SEQRES 23 B 353 ILE TYR ALA PRO PRO ILE LYS GLY GLN ILE THR CYS LYS SEQRES 24 B 353 SER ASP ILE THR GLY LEU LEU LEU LEU ARG ASP GLY GLY SEQRES 25 B 353 ASP THR THR ASP ASN THR GLU ILE PHE ARG PRO SER GLY SEQRES 26 B 353 GLY ASP MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS SEQRES 27 B 353 TYR LYS VAL VAL GLU ILE LYS PRO LEU HIS HIS HIS HIS SEQRES 28 B 353 HIS HIS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 605 14 HET FLC A 611 13 HET FLC A 612 18 HET SCN A 613 3 HET NAG B 601 14 HET NAG B 602 14 HET NAG B 603 14 HET NAG B 604 14 HET NAG B 605 14 HET NAG B 606 14 HET FLC B 611 13 HET FLC B 612 13 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FLC CITRATE ANION HETNAM SCN THIOCYANATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 15(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 3(C6 H12 O6) FORMUL 10 FLC 4(C6 H5 O7 3-) FORMUL 12 SCN C N S 1- FORMUL 21 HOH *416(H2 O) HELIX 1 AA1 GLU A 64 CYS A 74 1 11 HELIX 2 AA2 ASN A 98 LEU A 116 1 19 HELIX 3 AA3 GLY A 335 GLU A 351 1 17 HELIX 4 AA4 ASP A 367 THR A 372 1 6 HELIX 5 AA5 ASP A 474 TYR A 484 1 11 HELIX 6 AA6 GLU B 64 CYS B 74 1 11 HELIX 7 AA7 ASN B 98 LEU B 116 1 19 HELIX 8 AA8 GLY B 335 GLU B 351 1 17 HELIX 9 AA9 ASP B 367 THR B 372 1 6 HELIX 10 AB1 MET B 475 TYR B 484 1 10 SHEET 1 AA1 3 VAL A 75 PRO A 76 0 SHEET 2 AA1 3 PHE A 53 SER A 56 1 N CYS A 54 O VAL A 75 SHEET 3 AA1 3 HIS A 216 CYS A 218 -1 O CYS A 218 N PHE A 53 SHEET 1 AA2 4 VAL A 84 VAL A 85 0 SHEET 2 AA2 4 VAL A 242 VAL A 245 -1 O THR A 244 N VAL A 84 SHEET 3 AA2 4 TYR A 223 CYS A 228 -1 N LYS A 227 O SER A 243 SHEET 4 AA2 4 TYR A 486 GLU A 490 -1 O VAL A 489 N ALA A 224 SHEET 1 AA3 2 GLU A 91 ASN A 94 0 SHEET 2 AA3 2 LYS A 236 CYS A 239 -1 O CYS A 239 N GLU A 91 SHEET 1 AA4 4 SER A 199 THR A 202 0 SHEET 2 AA4 4 VAL A 120 THR A 123 -1 N THR A 123 O SER A 199 SHEET 3 AA4 4 LYS A 432 ILE A 434 -1 O LYS A 432 N LEU A 122 SHEET 4 AA4 4 ILE A 423 ASN A 425 -1 N ILE A 424 O ALA A 433 SHEET 1 AA5 5 LEU A 259 LEU A 261 0 SHEET 2 AA5 5 ILE A 443 ARG A 456 -1 O THR A 450 N LEU A 260 SHEET 3 AA5 5 ILE A 284 ARG A 298 -1 N ILE A 294 O SER A 447 SHEET 4 AA5 5 THR A 465 PRO A 470 0 SHEET 5 AA5 5 ASN A 357 PHE A 360 1 N SER A 359 O PHE A 468 SHEET 1 AA6 7 VAL A 271 ARG A 273 0 SHEET 2 AA6 7 ILE A 284 ARG A 298 -1 O ILE A 285 N ARG A 273 SHEET 3 AA6 7 ILE A 443 ARG A 456 -1 O SER A 447 N ILE A 294 SHEET 4 AA6 7 GLN A 328 SER A 334 0 SHEET 5 AA6 7 THR A 413 LYS A 421 -1 O CYS A 418 N ALA A 329 SHEET 6 AA6 7 GLU A 380 CYS A 384 -1 N TYR A 383 O ARG A 419 SHEET 7 AA6 7 HIS A 373 CYS A 377 -1 N HIS A 373 O CYS A 384 SHEET 1 AA7 3 VAL B 75 PRO B 76 0 SHEET 2 AA7 3 PHE B 53 SER B 56 1 N CYS B 54 O VAL B 75 SHEET 3 AA7 3 HIS B 216 CYS B 218 -1 O CYS B 218 N PHE B 53 SHEET 1 AA8 4 VAL B 84 VAL B 85 0 SHEET 2 AA8 4 VAL B 242 VAL B 245 -1 O THR B 244 N VAL B 84 SHEET 3 AA8 4 TYR B 223 CYS B 228 -1 N LYS B 227 O SER B 243 SHEET 4 AA8 4 TYR B 486 GLU B 490 -1 O VAL B 489 N ALA B 224 SHEET 1 AA9 2 GLU B 91 ASN B 94 0 SHEET 2 AA9 2 LYS B 236 CYS B 239 -1 O CYS B 239 N GLU B 91 SHEET 1 AB1 4 THR B 200 THR B 202 0 SHEET 2 AB1 4 VAL B 120 LEU B 122 -1 N LYS B 121 O LEU B 201 SHEET 3 AB1 4 LYS B 432 ILE B 434 -1 O LYS B 432 N LEU B 122 SHEET 4 AB1 4 ILE B 423 ASN B 425 -1 N ILE B 424 O ALA B 433 SHEET 1 AB2 5 LEU B 259 LEU B 261 0 SHEET 2 AB2 5 ILE B 443 ARG B 456 -1 O THR B 450 N LEU B 260 SHEET 3 AB2 5 ILE B 284 ARG B 298 -1 N ILE B 294 O SER B 447 SHEET 4 AB2 5 THR B 465 PRO B 470 0 SHEET 5 AB2 5 ASN B 357 PHE B 360 1 N SER B 359 O PHE B 468 SHEET 1 AB3 7 VAL B 271 ARG B 273 0 SHEET 2 AB3 7 ILE B 284 ARG B 298 -1 O ILE B 285 N ARG B 273 SHEET 3 AB3 7 ILE B 443 ARG B 456 -1 O SER B 447 N ILE B 294 SHEET 4 AB3 7 GLN B 328 SER B 334 0 SHEET 5 AB3 7 THR B 413 LYS B 421 -1 O CYS B 418 N ALA B 329 SHEET 6 AB3 7 GLU B 380 CYS B 384 -1 N TYR B 383 O ARG B 419 SHEET 7 AB3 7 HIS B 373 CYS B 377 -1 N PHE B 375 O PHE B 382 SSBOND 1 CYS A 54 CYS A 74 1555 1555 2.01 SSBOND 2 CYS A 119 CYS A 205 1555 1555 2.02 SSBOND 3 CYS A 218 CYS A 247 1555 1555 2.02 SSBOND 4 CYS A 228 CYS A 239 1555 1555 2.09 SSBOND 5 CYS A 296 CYS A 331 1555 1555 2.05 SSBOND 6 CYS A 377 CYS A 445 1555 1555 2.03 SSBOND 7 CYS A 384 CYS A 418 1555 1555 2.08 SSBOND 8 CYS B 54 CYS B 74 1555 1555 2.02 SSBOND 9 CYS B 119 CYS B 205 1555 1555 2.05 SSBOND 10 CYS B 218 CYS B 247 1555 1555 2.02 SSBOND 11 CYS B 228 CYS B 239 1555 1555 2.08 SSBOND 12 CYS B 296 CYS B 331 1555 1555 1.81 SSBOND 13 CYS B 377 CYS B 445 1555 1555 2.01 SSBOND 14 CYS B 384 CYS B 418 1555 1555 2.05 LINK ND2 ASN A 124 C1 NAG A 605 1555 1555 1.44 LINK ND2 ASN A 230 C1 NAG A 601 1555 1555 1.39 LINK ND2 ASN A 262 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 337 C1 NAG A 602 1555 1555 1.44 LINK ND2 ASN A 385 C1 NAG A 603 1555 1555 1.37 LINK ND2 ASN A 396 C1 NAG A 604 1555 1555 1.44 LINK ND2 ASN B 124 C1 NAG B 605 1555 1555 1.41 LINK ND2 ASN B 230 C1 NAG B 601 1555 1555 1.44 LINK ND2 ASN B 241 C1 NAG B 606 1555 1555 1.44 LINK ND2 ASN B 262 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 337 C1 NAG B 604 1555 1555 1.42 LINK ND2 ASN B 385 C1 NAG B 602 1555 1555 1.44 LINK ND2 ASN B 396 C1 NAG B 603 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 CRYST1 144.851 85.914 90.043 90.00 104.77 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006904 0.000000 0.001820 0.00000 SCALE2 0.000000 0.011640 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011485 0.00000