HEADER HYDROLASE/HYDROLASE INHIBITOR 12-DEC-15 5FAT
TITLE OXA-48 IN COMPLEX WITH FPI-1602
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: BETA-LACTAMASE;
COMPND 3 CHAIN: A, B;
COMPND 4 EC: 3.5.2.6;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE;
SOURCE 3 ORGANISM_TAXID: 573;
SOURCE 4 GENE: BLA OXA-48, BLAOXA-48, KPE71T_00045;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR A.M.KING,D.T.KING,S.FRENCH,E.BROUILLETTE,A.ASLI,A.N.ALEXANDER,
AUTHOR 2 M.VUCKOVIC,S.N.MAITI,T.R.PARR,E.D.BROWN,F.MALOUIN,N.C.J.STRYNADKA,
AUTHOR 3 G.D.WRIGHT
REVDAT 5 13-NOV-24 5FAT 1 REMARK
REVDAT 4 27-SEP-23 5FAT 1 LINK
REVDAT 3 20-NOV-19 5FAT 1 REMARK LINK
REVDAT 2 27-APR-16 5FAT 1 JRNL
REVDAT 1 20-JAN-16 5FAT 0
JRNL AUTH A.M.KING,D.T.KING,S.FRENCH,E.BROUILLETTE,A.ASLI,
JRNL AUTH 2 J.A.ALEXANDER,M.VUCKOVIC,S.N.MAITI,T.R.PARR,E.D.BROWN,
JRNL AUTH 3 F.MALOUIN,N.C.STRYNADKA,G.D.WRIGHT
JRNL TITL STRUCTURAL AND KINETIC CHARACTERIZATION OF
JRNL TITL 2 DIAZABICYCLOOCTANES AS DUAL INHIBITORS OF BOTH
JRNL TITL 3 SERINE-BETA-LACTAMASES AND PENICILLIN-BINDING PROTEINS.
JRNL REF ACS CHEM.BIOL. V. 11 864 2016
JRNL REFN ESSN 1554-8937
JRNL PMID 26731698
JRNL DOI 10.1021/ACSCHEMBIO.5B00944
REMARK 2
REMARK 2 RESOLUTION. 2.09 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0071
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.18
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 3 NUMBER OF REFLECTIONS : 33810
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.170
REMARK 3 R VALUE (WORKING SET) : 0.167
REMARK 3 FREE R VALUE : 0.216
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200
REMARK 3 FREE R VALUE TEST SET COUNT : 1851
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2417
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88
REMARK 3 BIN R VALUE (WORKING SET) : 0.2160
REMARK 3 BIN FREE R VALUE SET COUNT : 169
REMARK 3 BIN FREE R VALUE : 0.2570
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3978
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 59
REMARK 3 SOLVENT ATOMS : 295
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.49
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -2.41000
REMARK 3 B22 (A**2) : 2.50000
REMARK 3 B33 (A**2) : -0.09000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.183
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.164
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.547
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4132 ; 0.009 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 3890 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5586 ; 1.585 ; 1.922
REMARK 3 BOND ANGLES OTHERS (DEGREES): 8918 ; 0.769 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 484 ; 6.339 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;35.791 ;24.476
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 722 ;15.106 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.409 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 588 ; 0.097 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4706 ; 0.011 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 1026 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1948 ; 3.187 ; 3.257
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1947 ; 3.170 ; 3.255
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2428 ; 4.058 ; 4.860
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2429 ; 4.058 ; 4.860
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2184 ; 4.466 ; 3.669
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2185 ; 4.465 ; 3.671
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3155 ; 6.160 ; 5.348
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5206 ; 7.597 ;27.333
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5072 ; 7.551 ;27.080
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 5FAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-15.
REMARK 100 THE DEPOSITION ID IS D_1000216297.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 15-JUL-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : CLSI
REMARK 200 BEAMLINE : 08ID-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.00
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35720
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090
REMARK 200 RESOLUTION RANGE LOW (A) : 47.180
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 7.300
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 3HBR
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 53.05
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.005 M COCL2, 0.005 M CDCL2, 0.005 M
REMARK 280 MGCL2, 0.005 M NICL2, 0.1 M HEPES PH 7.5, 12% W/V PEG 3350,
REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.55500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.32500
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.87500
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.32500
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.55500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.87500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2640 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 19720 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 CO CO B 306 CO CO B 307 1.38
REMARK 500 OE1 GLU B 256 CO CO B 301 1.69
REMARK 500 NE2 HIS B 38 OE2 GLU B 256 1.93
REMARK 500 OAU 602 A 301 O HOH A 401 2.12
REMARK 500 OG SER A 70 OAN 602 A 301 2.12
REMARK 500 OG SER B 70 N 602 B 305 2.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ASP B 88 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ALA A 69 -133.18 42.38
REMARK 500 ASN A 106 58.05 -97.43
REMARK 500 SER A 155 4.23 -156.03
REMARK 500 ASP A 159 21.07 -145.40
REMARK 500 ALA B 69 -135.32 44.40
REMARK 500 SER B 155 2.53 -154.08
REMARK 500 ASP B 159 34.30 -154.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CO A 304 CO
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 34 ND1
REMARK 620 2 GLU A 37 OE2 101.0
REMARK 620 3 GLU A 256 OE2 87.1 71.5
REMARK 620 4 HOH A 449 O 166.6 76.9 79.7
REMARK 620 5 HOH A 539 O 102.3 154.2 98.9 77.9
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CD A 305 CD
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 37 OE2
REMARK 620 2 HIS A 38 NE2 100.4
REMARK 620 3 GLU A 125 OE1 117.7 49.0
REMARK 620 4 GLU A 125 OE2 120.4 50.6 2.9
REMARK 620 5 GLU A 256 OE1 118.7 114.3 66.1 64.1
REMARK 620 6 GLU A 256 OE2 68.8 106.5 72.2 72.9 54.1
REMARK 620 7 HOH A 449 O 70.6 170.1 138.5 137.2 74.5 74.6
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CO B 307 CO
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 140 ND1
REMARK 620 2 GLU A 147 OE1 70.0
REMARK 620 3 GLU A 147 OE2 94.5 50.8
REMARK 620 4 GLU B 147 OE1 87.3 113.3 71.0
REMARK 620 5 GLU B 147 OE2 86.4 111.9 70.0 1.5
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CD A 303 CD
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 143 OD1
REMARK 620 2 ASP A 143 OD2 57.7
REMARK 620 3 HOH A 415 O 85.0 80.1
REMARK 620 4 HOH A 432 O 141.0 83.4 91.8
REMARK 620 5 ASP B 143 OD1 105.8 68.8 132.6 51.0
REMARK 620 6 ASP B 143 OD2 103.7 67.6 133.2 52.9 2.1
REMARK 620 7 HOH B 428 O 96.9 94.6 172.3 82.0 39.7 39.0
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CO B 306 CO
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 147 OE1
REMARK 620 2 GLU A 147 OE2 53.6
REMARK 620 3 HIS B 140 ND1 97.5 52.8
REMARK 620 4 GLU B 147 OE1 95.1 49.9 2.9
REMARK 620 5 GLU B 147 OE2 93.7 48.6 4.2 1.4
REMARK 620 N 1 2 3 4
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 602 A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CO B 307
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5FAO RELATED DB: PDB
REMARK 900 RELATED ID: 5FA7 RELATED DB: PDB
REMARK 900 RELATED ID: 5FAP RELATED DB: PDB
REMARK 900 RELATED ID: 5FAQ RELATED DB: PDB
REMARK 900 RELATED ID: 5FAS RELATED DB: PDB
DBREF 5FAT A 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265
DBREF 5FAT B 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265
SEQRES 1 A 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE
SEQRES 2 A 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN
SEQRES 3 A 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG
SEQRES 4 A 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE LYS ILE
SEQRES 5 A 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS
SEQRES 6 A 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG
SEQRES 7 A 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR
SEQRES 8 A 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE
SEQRES 9 A 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU
SEQRES 10 A 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN
SEQRES 11 A 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER
SEQRES 12 A 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS
SEQRES 13 A 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL
SEQRES 14 A 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE
SEQRES 15 A 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO
SEQRES 16 A 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP
SEQRES 17 A 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR
SEQRES 18 A 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU
SEQRES 19 A 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO
SEQRES 1 B 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE
SEQRES 2 B 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN
SEQRES 3 B 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG
SEQRES 4 B 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE LYS ILE
SEQRES 5 B 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS
SEQRES 6 B 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG
SEQRES 7 B 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR
SEQRES 8 B 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE
SEQRES 9 B 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU
SEQRES 10 B 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN
SEQRES 11 B 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER
SEQRES 12 B 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS
SEQRES 13 B 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL
SEQRES 14 B 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE
SEQRES 15 B 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO
SEQRES 16 B 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP
SEQRES 17 B 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR
SEQRES 18 B 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU
SEQRES 19 B 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO
HET 602 A 301 24
HET CL A 302 1
HET CD A 303 1
HET CO A 304 1
HET CD A 305 1
HET CO A 306 1
HET CO B 301 1
HET CO B 302 1
HET CO B 303 1
HET CO B 304 1
HET 602 B 305 24
HET CO B 306 1
HET CO B 307 1
HETNAM 602 [[(3~{R},6~{S})-6-[(AZETIDIN-3-YLCARBONYLAMINO)
HETNAM 2 602 CARBAMOYL]-1-METHANOYL-PIPERIDIN-3-YL]AMINO] HYDROGEN
HETNAM 3 602 SULFATE
HETNAM CL CHLORIDE ION
HETNAM CD CADMIUM ION
HETNAM CO COBALT (II) ION
FORMUL 3 602 2(C11 H19 N5 O7 S)
FORMUL 4 CL CL 1-
FORMUL 5 CD 2(CD 2+)
FORMUL 6 CO 8(CO 2+)
FORMUL 16 HOH *295(H2 O)
HELIX 1 AA1 TRP A 31 GLU A 37 1 7
HELIX 2 AA2 ASN A 58 ASN A 63 1 6
HELIX 3 AA3 PRO A 68 THR A 71 5 4
HELIX 4 AA4 PHE A 72 LEU A 83 1 12
HELIX 5 AA5 ILE A 102 ASN A 106 5 5
HELIX 6 AA6 ASN A 110 TYR A 117 1 8
HELIX 7 AA7 VAL A 119 GLY A 131 1 13
HELIX 8 AA8 GLY A 131 ASP A 143 1 13
HELIX 9 AA9 SER A 155 GLY A 160 1 6
HELIX 10 AB1 ALA A 166 HIS A 178 1 13
HELIX 11 AB2 SER A 184 MET A 195 1 12
HELIX 12 AB3 THR A 243 LEU A 247 5 5
HELIX 13 AB4 GLY A 248 GLU A 261 1 14
HELIX 14 AB5 TRP B 31 HIS B 38 1 8
HELIX 15 AB6 ASN B 58 GLN B 64 1 7
HELIX 16 AB7 PRO B 68 THR B 71 5 4
HELIX 17 AB8 PHE B 72 LEU B 83 1 12
HELIX 18 AB9 ILE B 102 ASN B 106 5 5
HELIX 19 AC1 ASN B 110 TYR B 117 1 8
HELIX 20 AC2 VAL B 119 GLY B 131 1 13
HELIX 21 AC3 GLY B 131 PHE B 142 1 12
HELIX 22 AC4 SER B 155 GLY B 160 1 6
HELIX 23 AC5 ALA B 166 HIS B 178 1 13
HELIX 24 AC6 SER B 184 MET B 195 1 12
HELIX 25 AC7 THR B 243 LEU B 247 5 5
HELIX 26 AC8 GLY B 248 GLU B 261 1 14
SHEET 1 AA1 7 TRP A 25 GLU A 27 0
SHEET 2 AA1 7 GLN A 53 THR A 56 1 O GLY A 54 N GLN A 26
SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N LEU A 46 O PHE A 55
SHEET 4 AA1 7 ASN A 231 ASP A 240 -1 O ASN A 238 N VAL A 43
SHEET 5 AA1 7 ILE A 219 LEU A 228 -1 N VAL A 226 O TRP A 233
SHEET 6 AA1 7 ILE A 204 SER A 212 -1 N ILE A 204 O GLU A 227
SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205
SHEET 1 AA2 2 ALA A 65 PHE A 66 0
SHEET 2 AA2 2 ILE A 164 SER A 165 -1 O ILE A 164 N PHE A 66
SHEET 1 AA3 7 TRP B 25 GLU B 27 0
SHEET 2 AA3 7 GLN B 53 THR B 56 1 O GLY B 54 N GLN B 26
SHEET 3 AA3 7 GLY B 42 ASN B 48 -1 N LEU B 46 O PHE B 55
SHEET 4 AA3 7 VAL B 232 ASP B 240 -1 O ASN B 238 N VAL B 43
SHEET 5 AA3 7 ILE B 219 GLU B 227 -1 N GLY B 224 O PHE B 235
SHEET 6 AA3 7 ILE B 204 SER B 212 -1 N ILE B 204 O GLU B 227
SHEET 7 AA3 7 LEU B 196 ALA B 199 -1 N GLU B 198 O ILE B 205
SHEET 1 AA4 2 ALA B 65 PHE B 66 0
SHEET 2 AA4 2 ILE B 164 SER B 165 -1 O ILE B 164 N PHE B 66
LINK OG SER A 70 CAM 602 A 301 1555 1555 1.34
LINK OG SER B 70 CAM 602 B 305 1555 1555 1.34
LINK ND1 HIS A 34 CO CO A 304 1555 1555 2.00
LINK OE2 GLU A 37 CO CO A 304 1555 1555 2.19
LINK OE2 GLU A 37 CD CD A 305 1555 1555 2.30
LINK NE2 HIS A 38 CD CD A 305 1555 1555 2.19
LINK OE1 GLU A 125 CD CD A 305 1555 4455 2.37
LINK OE2 GLU A 125 CD CD A 305 1555 4455 2.54
LINK ND1 HIS A 140 CO CO B 307 1555 3555 2.77
LINK OD1 ASP A 143 CD CD A 303 1555 1555 2.37
LINK OD2 ASP A 143 CD CD A 303 1555 1555 2.07
LINK OE1 GLU A 147 CO CO B 306 1555 3555 2.33
LINK OE2 GLU A 147 CO CO B 306 1555 3555 2.45
LINK OE1 GLU A 147 CO CO B 307 1555 3555 2.47
LINK OE2 GLU A 147 CO CO B 307 1555 3555 2.55
LINK OE2 GLU A 256 CO CO A 304 1555 1555 2.48
LINK OE1 GLU A 256 CD CD A 305 1555 1555 2.22
LINK OE2 GLU A 256 CD CD A 305 1555 1555 2.54
LINK CD CD A 303 O HOH A 415 1555 1555 1.84
LINK CD CD A 303 O HOH A 432 1555 1555 1.89
LINK CD CD A 303 OD1 ASP B 143 3545 1555 2.18
LINK CD CD A 303 OD2 ASP B 143 3545 1555 2.23
LINK CD CD A 303 O HOH B 428 1555 3555 1.87
LINK CO CO A 304 O HOH A 449 1555 1555 2.18
LINK CO CO A 304 O HOH A 539 1555 1555 2.12
LINK CD CD A 305 O HOH A 449 1555 1555 2.40
LINK ND1 HIS B 34 CO CO B 301 1555 1555 2.42
LINK ND1 HIS B 140 CO CO B 306 1555 1555 2.75
LINK OE1 GLU B 147 CO CO B 306 1555 1555 2.34
LINK OE2 GLU B 147 CO CO B 306 1555 1555 2.68
LINK OE1 GLU B 147 CO CO B 307 1555 1555 2.33
LINK OE2 GLU B 147 CO CO B 307 1555 1555 2.56
CISPEP 1 GLU A 216 PRO A 217 0 -6.19
CISPEP 2 GLU B 216 PRO B 217 0 -10.02
SITE 1 AC1 14 ALA A 69 SER A 70 SER A 118 VAL A 120
SITE 2 AC1 14 LYS A 208 THR A 209 GLY A 210 TYR A 211
SITE 3 AC1 14 THR A 213 ARG A 214 ARG A 250 HOH A 401
SITE 4 AC1 14 HOH A 472 HOH A 537
SITE 1 AC2 2 ARG A 206 ARG B 206
SITE 1 AC3 5 ASP A 143 HOH A 415 HOH A 432 ASP B 143
SITE 2 AC3 5 HOH B 428
SITE 1 AC4 6 HIS A 34 GLU A 37 GLU A 256 CD A 305
SITE 2 AC4 6 HOH A 449 HOH A 539
SITE 1 AC5 6 GLU A 37 HIS A 38 GLU A 125 GLU A 256
SITE 2 AC5 6 CO A 304 HOH A 449
SITE 1 AC6 2 HIS A 90 HIS B 178
SITE 1 AC7 2 HIS B 34 GLU B 256
SITE 1 AC8 2 HIS A 140 CO B 303
SITE 1 AC9 2 HIS B 140 CO B 302
SITE 1 AD1 2 HIS A 178 HIS B 90
SITE 1 AD2 4 GLU A 147 HIS B 140 GLU B 147 CO B 307
SITE 1 AD3 4 HIS A 140 GLU A 147 GLU B 147 CO B 306
CRYST1 73.110 75.750 106.650 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013678 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013201 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009376 0.00000