HEADER ANTITOXIN 18-DEC-15 5FFP TITLE CRYSTAL STRUCTURE OF CDII FROM BURKHOLDERIA DOLOSA AUO158 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNITY 23 FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA DOLOSA AU0158; SOURCE 3 ORGANISM_TAXID: 350701; SOURCE 4 GENE: AK34_4389; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG58 KEYWDS IMMUNITY PROTEIN, ANTITOXIN, STRUCTURAL GENOMICS, PSI-BIOLOGY, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, STRUCTURE-FUNCTION KEYWDS 3 ANALYSIS OF POLYMORPHIC CDI TOXIN-IMMUNITY PROTEIN COMPLEXES, UC4CDI EXPDTA X-RAY DIFFRACTION AUTHOR K.MICHALSKA,L.STOLS,W.ESCHENFELDT,C.W.GOULDING,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG),STRUCTURE-FUNCTION ANALYSIS OF AUTHOR 3 POLYMORPHIC CDI TOXIN-IMMUNITY PROTEIN COMPLEXES (UC4CDI) REVDAT 4 06-NOV-24 5FFP 1 REMARK REVDAT 3 25-DEC-19 5FFP 1 REMARK REVDAT 2 20-SEP-17 5FFP 1 REMARK REVDAT 1 20-JAN-16 5FFP 0 JRNL AUTH K.MICHALSKA,L.STOLS,W.ESCHENFELDT,C.W.GOULDING,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF CDII FROM BURKHOLDERIA DOLOSA AUO158 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 16893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN RESOLUTION SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1861 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2392 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.4350 REMARK 3 BIN FREE R VALUE SET COUNT : 283 REMARK 3 BIN FREE R VALUE : 0.4410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2420 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 14.40000 REMARK 3 B22 (A**2) : 14.40000 REMARK 3 B33 (A**2) : -28.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.060 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.042 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.105 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2491 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2238 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3372 ; 1.432 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5160 ; 0.987 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 308 ; 6.947 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 120 ;36.270 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 366 ;16.082 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.062 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 363 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2844 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 594 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1238 ; 0.683 ; 1.283 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1237 ; 0.682 ; 1.282 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1544 ; 1.180 ; 1.919 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1545 ; 1.179 ; 1.919 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1253 ; 1.579 ; 1.437 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1253 ; 1.545 ; 1.438 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1829 ; 2.048 ; 2.094 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2707 ; 3.226 ;10.270 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2708 ; 3.226 ;10.296 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 155 B 1 155 8312 0.11 0.05 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.572 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.428 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): 55.1621 3.1463 28.2626 REMARK 3 T TENSOR REMARK 3 T11: 0.2207 T22: 0.0631 REMARK 3 T33: 0.2169 T12: 0.0646 REMARK 3 T13: -0.0383 T23: -0.0535 REMARK 3 L TENSOR REMARK 3 L11: 0.3927 L22: 2.0280 REMARK 3 L33: 9.2885 L12: 0.3806 REMARK 3 L13: -1.5603 L23: 0.2755 REMARK 3 S TENSOR REMARK 3 S11: 0.0646 S12: -0.0806 S13: 0.0710 REMARK 3 S21: 0.0941 S22: 0.0300 S23: -0.1583 REMARK 3 S31: -0.4533 S32: 0.3203 S33: -0.0946 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 68 REMARK 3 ORIGIN FOR THE GROUP (A): 52.1704 22.7809 29.2818 REMARK 3 T TENSOR REMARK 3 T11: 0.4610 T22: 0.2004 REMARK 3 T33: 0.2743 T12: 0.0180 REMARK 3 T13: -0.0189 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 14.4170 L22: 6.5025 REMARK 3 L33: 5.1717 L12: -8.4488 REMARK 3 L13: -7.5641 L23: 3.9677 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: 0.2163 S13: 0.2545 REMARK 3 S21: -0.0950 S22: 0.0296 S23: -0.0975 REMARK 3 S31: -0.0172 S32: -0.3878 S33: -0.0386 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 40.8755 20.5023 24.2668 REMARK 3 T TENSOR REMARK 3 T11: 0.8596 T22: 0.2902 REMARK 3 T33: 0.5309 T12: 0.2877 REMARK 3 T13: -0.0996 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 2.1286 L22: 6.0280 REMARK 3 L33: 5.8004 L12: -1.1854 REMARK 3 L13: -0.3931 L23: -5.2780 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: 0.0634 S13: 0.3740 REMARK 3 S21: -0.0169 S22: 0.6439 S23: 0.5726 REMARK 3 S31: -0.2479 S32: -0.8030 S33: -0.7116 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1280 15.4833 31.3924 REMARK 3 T TENSOR REMARK 3 T11: 0.4122 T22: 0.1964 REMARK 3 T33: 0.2165 T12: 0.2124 REMARK 3 T13: 0.0609 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.9572 L22: 8.2938 REMARK 3 L33: 8.2829 L12: 0.7942 REMARK 3 L13: -0.5745 L23: 1.9535 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: -0.0386 S13: 0.0549 REMARK 3 S21: 0.4882 S22: -0.1095 S23: 0.4222 REMARK 3 S31: -0.1455 S32: -0.7118 S33: 0.0684 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 56.4649 14.9720 35.8850 REMARK 3 T TENSOR REMARK 3 T11: 0.4574 T22: 0.1078 REMARK 3 T33: 0.1806 T12: 0.0294 REMARK 3 T13: -0.0136 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 13.0303 L22: 3.7150 REMARK 3 L33: 3.4103 L12: -1.2627 REMARK 3 L13: -1.4281 L23: 0.8110 REMARK 3 S TENSOR REMARK 3 S11: 0.0781 S12: -0.5209 S13: 0.2005 REMARK 3 S21: -0.0942 S22: -0.0261 S23: -0.2082 REMARK 3 S31: -0.5696 S32: 0.2202 S33: -0.0521 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 11 REMARK 3 ORIGIN FOR THE GROUP (A): 36.1348 42.7405 -7.6683 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.1327 REMARK 3 T33: 0.0944 T12: 0.0295 REMARK 3 T13: -0.0295 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 14.0930 L22: 7.9914 REMARK 3 L33: 5.1417 L12: -1.5978 REMARK 3 L13: -4.2108 L23: -5.0299 REMARK 3 S TENSOR REMARK 3 S11: 0.0149 S12: 0.1598 S13: 0.2992 REMARK 3 S21: 0.2123 S22: -0.0770 S23: -0.2393 REMARK 3 S31: -0.1542 S32: 0.0010 S33: 0.0621 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 43 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4285 44.6619 4.0303 REMARK 3 T TENSOR REMARK 3 T11: 0.0063 T22: 0.1254 REMARK 3 T33: 0.0631 T12: 0.0206 REMARK 3 T13: 0.0112 T23: 0.0569 REMARK 3 L TENSOR REMARK 3 L11: 3.8424 L22: 1.2860 REMARK 3 L33: 7.4700 L12: -0.0087 REMARK 3 L13: 0.2151 L23: 0.7052 REMARK 3 S TENSOR REMARK 3 S11: -0.0923 S12: -0.2129 S13: -0.1159 REMARK 3 S21: -0.0288 S22: 0.0171 S23: 0.0927 REMARK 3 S31: 0.0410 S32: -0.1567 S33: 0.0753 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 44 B 76 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0113 31.3469 0.7967 REMARK 3 T TENSOR REMARK 3 T11: 0.5686 T22: 0.3388 REMARK 3 T33: 0.2902 T12: 0.1751 REMARK 3 T13: -0.2220 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 4.8442 L22: 4.6705 REMARK 3 L33: 0.4659 L12: -3.3243 REMARK 3 L13: -1.0781 L23: 0.2792 REMARK 3 S TENSOR REMARK 3 S11: -0.2399 S12: -0.4139 S13: -0.0284 REMARK 3 S21: 0.4710 S22: 0.2418 S23: -0.5120 REMARK 3 S31: 0.2524 S32: 0.1752 S33: -0.0019 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 77 B 117 REMARK 3 ORIGIN FOR THE GROUP (A): 40.4304 25.5019 5.3775 REMARK 3 T TENSOR REMARK 3 T11: 0.4741 T22: 0.3415 REMARK 3 T33: 0.4828 T12: 0.1412 REMARK 3 T13: -0.0305 T23: 0.1142 REMARK 3 L TENSOR REMARK 3 L11: 1.8072 L22: 2.1521 REMARK 3 L33: 7.7423 L12: -0.5304 REMARK 3 L13: 1.7737 L23: -2.9396 REMARK 3 S TENSOR REMARK 3 S11: 0.2601 S12: -0.3936 S13: -0.7920 REMARK 3 S21: 0.1896 S22: -0.0150 S23: 0.1215 REMARK 3 S31: 1.0118 S32: 0.2017 S33: -0.2451 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 118 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9252 33.2977 -4.5317 REMARK 3 T TENSOR REMARK 3 T11: 0.1622 T22: 0.1960 REMARK 3 T33: 0.1339 T12: 0.1092 REMARK 3 T13: -0.0383 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 6.0684 L22: 5.8836 REMARK 3 L33: 6.8718 L12: 0.0751 REMARK 3 L13: -1.4926 L23: 2.0780 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.1690 S13: -0.4501 REMARK 3 S21: -0.3629 S22: 0.0604 S23: -0.3413 REMARK 3 S31: 0.4980 S32: 0.2536 S33: -0.0810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REFINEMENT PERFORMED AGAINST INTENSITIES. REMARK 4 REMARK 4 5FFP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216510. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18768 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)2SO4, 0.1 SODIUM ACETATE PH REMARK 280 5.6, 30% PEG 4000, CRYO SATURATED SUCROSE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.03250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.03250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.03250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS HAVE INDICATED THAT THE BIOLOGICAL UNIT IS UNKNOWN REMARK 300 AT THIS STAGE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 156 REMARK 465 LYS A 157 REMARK 465 ASP A 158 REMARK 465 PHE A 159 REMARK 465 ASN A 160 REMARK 465 ALA A 161 REMARK 465 GLY A 162 REMARK 465 SER A 163 REMARK 465 LEU A 164 REMARK 465 ALA A 165 REMARK 465 GLY A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 PRO B 156 REMARK 465 LYS B 157 REMARK 465 ASP B 158 REMARK 465 PHE B 159 REMARK 465 ASN B 160 REMARK 465 ALA B 161 REMARK 465 GLY B 162 REMARK 465 SER B 163 REMARK 465 LEU B 164 REMARK 465 ALA B 165 REMARK 465 GLY B 166 REMARK 465 HIS B 167 REMARK 465 HIS B 168 REMARK 465 HIS B 169 REMARK 465 HIS B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 8 -78.72 -116.22 REMARK 500 ALA A 91 73.04 -113.81 REMARK 500 ASP A 118 -103.30 52.83 REMARK 500 LYS A 128 -128.90 57.61 REMARK 500 THR B 8 -77.78 -118.07 REMARK 500 ALA B 91 73.20 -113.00 REMARK 500 ASP B 118 -104.25 52.89 REMARK 500 LYS B 128 -129.13 57.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC111477 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: MCSG-CPX200210 RELATED DB: TARGETTRACK DBREF 5FFP A 1 172 PDB 5FFP 5FFP 1 172 DBREF 5FFP B 1 172 PDB 5FFP 5FFP 1 172 SEQRES 1 A 172 MSE LEU SER GLY ASN PRO HIS THR PHE ALA ILE TRP CYS SEQRES 2 A 172 ASP ALA VAL GLU SER TRP SER THR PRO ALA PHE ALA ASN SEQRES 3 A 172 GLY CYS LEU GLY TYR PHE MSE GLY GLY LYS LEU VAL TRP SEQRES 4 A 172 SER SER ASN SER THR LEU GLY VAL ASP LEU SER MSE LEU SEQRES 5 A 172 SER ARG LEU HIS CYS MSE ARG ASN THR VAL GLU ASP ALA SEQRES 6 A 172 GLU LEU PHE HIS ILE SER PRO GLU ASP ALA TYR ARG GLU SEQRES 7 A 172 LEU CYS ASN ARG ALA PHE PRO SER MSE ASP SER GLY ALA SEQRES 8 A 172 GLU SER ASN ASP PHE THR HIS LEU VAL SER ALA GLU SER SEQRES 9 A 172 LEU SER ASP GLU GLY TYR TYR ILE PHE LEU VAL GLU TYR SEQRES 10 A 172 ASP GLU SER ALA LYS LEU ILE TYR GLY PHE LYS GLU ASN SEQRES 11 A 172 SER ARG GLU ALA GLY GLU VAL VAL LEU VAL ARG GLY GLU SEQRES 12 A 172 PHE GLN SER VAL VAL ARG ASP VAL LEU ALA LYS SER PRO SEQRES 13 A 172 LYS ASP PHE ASN ALA GLY SER LEU ALA GLY HIS HIS HIS SEQRES 14 A 172 HIS HIS HIS SEQRES 1 B 172 MSE LEU SER GLY ASN PRO HIS THR PHE ALA ILE TRP CYS SEQRES 2 B 172 ASP ALA VAL GLU SER TRP SER THR PRO ALA PHE ALA ASN SEQRES 3 B 172 GLY CYS LEU GLY TYR PHE MSE GLY GLY LYS LEU VAL TRP SEQRES 4 B 172 SER SER ASN SER THR LEU GLY VAL ASP LEU SER MSE LEU SEQRES 5 B 172 SER ARG LEU HIS CYS MSE ARG ASN THR VAL GLU ASP ALA SEQRES 6 B 172 GLU LEU PHE HIS ILE SER PRO GLU ASP ALA TYR ARG GLU SEQRES 7 B 172 LEU CYS ASN ARG ALA PHE PRO SER MSE ASP SER GLY ALA SEQRES 8 B 172 GLU SER ASN ASP PHE THR HIS LEU VAL SER ALA GLU SER SEQRES 9 B 172 LEU SER ASP GLU GLY TYR TYR ILE PHE LEU VAL GLU TYR SEQRES 10 B 172 ASP GLU SER ALA LYS LEU ILE TYR GLY PHE LYS GLU ASN SEQRES 11 B 172 SER ARG GLU ALA GLY GLU VAL VAL LEU VAL ARG GLY GLU SEQRES 12 B 172 PHE GLN SER VAL VAL ARG ASP VAL LEU ALA LYS SER PRO SEQRES 13 B 172 LYS ASP PHE ASN ALA GLY SER LEU ALA GLY HIS HIS HIS SEQRES 14 B 172 HIS HIS HIS MODRES 5FFP MSE A 33 MET MODIFIED RESIDUE MODRES 5FFP MSE A 51 MET MODIFIED RESIDUE MODRES 5FFP MSE A 58 MET MODIFIED RESIDUE MODRES 5FFP MSE A 87 MET MODIFIED RESIDUE MODRES 5FFP MSE B 33 MET MODIFIED RESIDUE MODRES 5FFP MSE B 51 MET MODIFIED RESIDUE MODRES 5FFP MSE B 58 MET MODIFIED RESIDUE MODRES 5FFP MSE B 87 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 33 8 HET MSE A 51 8 HET MSE A 58 8 HET MSE A 87 8 HET MSE B 1 8 HET MSE B 33 8 HET MSE B 51 8 HET MSE B 58 8 HET MSE B 87 8 HET EPE B 201 15 HETNAM MSE SELENOMETHIONINE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 EPE C8 H18 N2 O4 S FORMUL 4 HOH *5(H2 O) HELIX 1 AA1 LEU A 45 SER A 53 1 9 HELIX 2 AA2 ARG A 54 ARG A 59 5 6 HELIX 3 AA3 ASP A 64 ILE A 70 1 7 HELIX 4 AA4 SER A 71 PHE A 84 1 14 HELIX 5 AA5 SER A 86 GLY A 90 5 5 HELIX 6 AA6 ALA A 102 GLY A 109 1 8 HELIX 7 AA7 GLY A 142 SER A 155 1 14 HELIX 8 AA8 LEU B 45 SER B 53 1 9 HELIX 9 AA9 ARG B 54 ARG B 59 5 6 HELIX 10 AB1 ASP B 64 ILE B 70 1 7 HELIX 11 AB2 SER B 71 PHE B 84 1 14 HELIX 12 AB3 SER B 86 GLY B 90 5 5 HELIX 13 AB4 ALA B 102 GLY B 109 1 8 HELIX 14 AB5 GLY B 142 SER B 155 1 14 SHEET 1 AA1 4 LEU A 2 ASN A 5 0 SHEET 2 AA1 4 PHE A 9 ALA A 15 -1 O ILE A 11 N SER A 3 SHEET 3 AA1 4 ASN A 26 MSE A 33 -1 O CYS A 28 N ASP A 14 SHEET 4 AA1 4 LYS A 36 THR A 44 -1 O LYS A 36 N MSE A 33 SHEET 1 AA2 3 TYR A 110 TYR A 117 0 SHEET 2 AA2 3 SER A 120 PHE A 127 -1 O ILE A 124 N PHE A 113 SHEET 3 AA2 3 GLY A 135 VAL A 140 -1 O LEU A 139 N ALA A 121 SHEET 1 AA3 4 LEU B 2 ASN B 5 0 SHEET 2 AA3 4 PHE B 9 ALA B 15 -1 O ILE B 11 N SER B 3 SHEET 3 AA3 4 ASN B 26 MSE B 33 -1 O CYS B 28 N ASP B 14 SHEET 4 AA3 4 LYS B 36 THR B 44 -1 O LYS B 36 N MSE B 33 SHEET 1 AA4 3 TYR B 110 TYR B 117 0 SHEET 2 AA4 3 SER B 120 PHE B 127 -1 O ILE B 124 N PHE B 113 SHEET 3 AA4 3 GLY B 135 VAL B 140 -1 O LEU B 139 N ALA B 121 LINK C MSE A 1 N LEU A 2 1555 1555 1.32 LINK C PHE A 32 N MSE A 33 1555 1555 1.32 LINK C MSE A 33 N GLY A 34 1555 1555 1.34 LINK C SER A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N LEU A 52 1555 1555 1.34 LINK C CYS A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N ARG A 59 1555 1555 1.34 LINK C SER A 86 N MSE A 87 1555 1555 1.32 LINK C MSE A 87 N ASP A 88 1555 1555 1.33 LINK C MSE B 1 N LEU B 2 1555 1555 1.32 LINK C PHE B 32 N MSE B 33 1555 1555 1.32 LINK C MSE B 33 N GLY B 34 1555 1555 1.33 LINK C SER B 50 N MSE B 51 1555 1555 1.33 LINK C MSE B 51 N LEU B 52 1555 1555 1.34 LINK C CYS B 57 N MSE B 58 1555 1555 1.32 LINK C MSE B 58 N ARG B 59 1555 1555 1.33 LINK C SER B 86 N MSE B 87 1555 1555 1.33 LINK C MSE B 87 N ASP B 88 1555 1555 1.33 SITE 1 AC1 5 SER B 43 THR B 44 VAL B 47 GLU B 103 SITE 2 AC1 5 ASP B 107 CRYST1 116.298 116.298 70.065 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008599 0.004964 0.000000 0.00000 SCALE2 0.000000 0.009929 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014272 0.00000 HETATM 1 N MSE A 1 60.472 0.191 32.483 1.00 45.93 N ANISOU 1 N MSE A 1 5659 5779 6013 866 -793 -569 N HETATM 2 CA MSE A 1 60.980 1.298 33.343 1.00 47.49 C ANISOU 2 CA MSE A 1 5791 6132 6120 601 -856 -630 C HETATM 3 C MSE A 1 59.801 2.062 33.859 1.00 41.29 C ANISOU 3 C MSE A 1 5285 5029 5373 461 -810 -646 C HETATM 4 O MSE A 1 58.799 2.211 33.166 1.00 38.36 O ANISOU 4 O MSE A 1 5064 4411 5100 485 -718 -630 O HETATM 5 CB MSE A 1 61.949 2.162 32.537 1.00 56.47 C ANISOU 5 CB MSE A 1 6733 7505 7215 350 -825 -690 C HETATM 6 CG MSE A 1 61.640 3.665 32.570 1.00 68.73 C ANISOU 6 CG MSE A 1 8490 8892 8732 -25 -759 -758 C HETATM 7 SE MSE A 1 62.967 4.716 31.514 1.00 95.75 SE ANISOU 7 SE MSE A 1 11732 12616 12033 -441 -686 -853 SE HETATM 8 CE MSE A 1 63.477 3.430 30.093 1.00 88.21 C ANISOU 8 CE MSE A 1 10469 11853 11192 -99 -653 -794 C