HEADER HYDROLASE 22-DEC-15 5FHG TITLE STRUCTURE OF UNLIGANDED PIF1 FROM BACTEROIDES SP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PIF1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES SP. 2_1_16; SOURCE 3 ORGANISM_TAXID: 469587; SOURCE 4 GENE: HMPREF0101_01022; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PIF1 HELICASE, DNA HELICASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHOU,W.REN,S.R.BHARATH,H.SONG REVDAT 2 20-MAR-24 5FHG 1 REMARK REVDAT 1 30-MAR-16 5FHG 0 JRNL AUTH X.ZHOU,W.REN,S.R.BHARATH,X.TANG,Y.HE,C.CHEN,Z.LIU,D.LI, JRNL AUTH 2 H.SONG JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE UNWINDING JRNL TITL 2 MECHANISM OF BACTEROIDES SP PIF1 JRNL REF CELL REP V. 14 2030 2016 JRNL REFN ESSN 2211-1247 JRNL PMID 26904952 JRNL DOI 10.1016/J.CELREP.2016.02.008 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 61694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 3017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.5591 - 5.6026 0.99 2997 180 0.2231 0.2543 REMARK 3 2 5.6026 - 4.4474 1.00 2991 140 0.1633 0.2160 REMARK 3 3 4.4474 - 3.8854 0.98 2887 149 0.1533 0.1948 REMARK 3 4 3.8854 - 3.5302 0.98 2896 152 0.1618 0.2226 REMARK 3 5 3.5302 - 3.2772 0.96 2824 123 0.1695 0.2442 REMARK 3 6 3.2772 - 3.0840 0.93 2729 155 0.1922 0.2555 REMARK 3 7 3.0840 - 2.9295 0.93 2726 133 0.1961 0.2512 REMARK 3 8 2.9295 - 2.8020 0.92 2718 107 0.2010 0.3050 REMARK 3 9 2.8020 - 2.6942 0.92 2685 140 0.1953 0.2821 REMARK 3 10 2.6942 - 2.6012 0.91 2686 129 0.1950 0.2647 REMARK 3 11 2.6012 - 2.5199 0.89 2572 151 0.1949 0.2649 REMARK 3 12 2.5199 - 2.4478 0.89 2599 126 0.1882 0.2539 REMARK 3 13 2.4478 - 2.3834 0.87 2534 131 0.2019 0.2713 REMARK 3 14 2.3834 - 2.3252 0.87 2534 141 0.1957 0.3032 REMARK 3 15 2.3252 - 2.2724 0.86 2544 119 0.2064 0.2904 REMARK 3 16 2.2724 - 2.2240 0.86 2501 142 0.2182 0.2794 REMARK 3 17 2.2240 - 2.1795 0.86 2552 124 0.2044 0.3033 REMARK 3 18 2.1795 - 2.1384 0.87 2505 123 0.2109 0.2597 REMARK 3 19 2.1384 - 2.1002 0.87 2578 109 0.2171 0.2514 REMARK 3 20 2.1002 - 2.0646 0.87 2520 139 0.2223 0.2891 REMARK 3 21 2.0646 - 2.0313 0.89 2527 159 0.2352 0.3016 REMARK 3 22 2.0313 - 2.0000 0.88 2572 145 0.2380 0.3210 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6041 REMARK 3 ANGLE : 0.819 8173 REMARK 3 CHIRALITY : 0.057 932 REMARK 3 PLANARITY : 0.005 1033 REMARK 3 DIHEDRAL : 11.332 3623 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000214866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AIMLESS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61720 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 61.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM MGCL2, 0.1 M TRIS, 10% PEG REMARK 280 8000, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.23850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.61925 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.85775 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 45 REMARK 465 GLY A 46 REMARK 465 ASN A 86 REMARK 465 LYS A 87 REMARK 465 ASP A 433 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ASP B 3 REMARK 465 MET B 4 REMARK 465 ILE B 5 REMARK 465 LEU B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 GLU B 9 REMARK 465 MET B 10 REMARK 465 GLN B 11 REMARK 465 LYS B 12 REMARK 465 ILE B 13 REMARK 465 MET B 14 REMARK 465 ASN B 15 REMARK 465 LEU B 16 REMARK 465 ILE B 17 REMARK 465 GLN B 18 REMARK 465 ASP B 19 REMARK 465 GLY B 28 REMARK 465 LYS B 29 REMARK 465 ALA B 30 REMARK 465 GLY B 31 REMARK 465 SER B 32 REMARK 465 GLY B 33 REMARK 465 LYS B 34 REMARK 465 THR B 35 REMARK 465 THR B 36 REMARK 465 PHE B 37 REMARK 465 LEU B 38 REMARK 465 LYS B 39 REMARK 465 TYR B 40 REMARK 465 LEU B 41 REMARK 465 ILE B 42 REMARK 465 GLU B 43 REMARK 465 LYS B 44 REMARK 465 SER B 45 REMARK 465 GLY B 46 REMARK 465 LYS B 47 REMARK 465 ASP B 142 REMARK 465 LEU B 143 REMARK 465 PHE B 144 REMARK 465 GLN B 145 REMARK 465 LEU B 146 REMARK 465 PRO B 147 REMARK 465 PRO B 148 REMARK 465 VAL B 149 REMARK 465 THR B 150 REMARK 465 LYS B 151 REMARK 465 LYS B 152 REMARK 465 GLN B 153 REMARK 465 GLU B 154 REMARK 465 ARG B 155 REMARK 465 GLU B 156 REMARK 465 GLU B 182 REMARK 465 LEU B 183 REMARK 465 THR B 184 REMARK 465 LYS B 185 REMARK 465 ILE B 186 REMARK 465 PHE B 187 REMARK 465 ARG B 188 REMARK 465 GLN B 189 REMARK 465 THR B 190 REMARK 465 GLU B 191 REMARK 465 PRO B 192 REMARK 465 GLU B 193 REMARK 465 PHE B 194 REMARK 465 ILE B 195 REMARK 465 ASN B 196 REMARK 465 VAL B 197 REMARK 465 LEU B 198 REMARK 465 ASN B 199 REMARK 465 ASN B 200 REMARK 465 ILE B 201 REMARK 465 ARG B 202 REMARK 465 ASN B 203 REMARK 465 TYR B 204 REMARK 465 GLN B 205 REMARK 465 VAL B 206 REMARK 465 THR B 207 REMARK 465 SER B 208 REMARK 465 ASP B 209 REMARK 465 GLU B 210 REMARK 465 LEU B 211 REMARK 465 ASP B 212 REMARK 465 LEU B 213 REMARK 465 LEU B 214 REMARK 465 SER B 215 REMARK 465 GLU B 216 REMARK 465 LEU B 217 REMARK 465 LYS B 218 REMARK 465 ASP B 219 REMARK 465 ARG B 220 REMARK 465 LYS B 221 REMARK 465 LYS B 335 REMARK 465 ASP B 336 REMARK 465 ASN B 337 REMARK 465 GLU B 338 REMARK 465 VAL B 375 REMARK 465 SER B 376 REMARK 465 HIS B 377 REMARK 465 THR B 378 REMARK 465 PHE B 379 REMARK 465 CYS B 380 REMARK 465 PRO B 381 REMARK 465 GLY B 382 REMARK 465 GLN B 383 REMARK 465 LEU B 384 REMARK 465 ALA B 401 REMARK 465 PHE B 402 REMARK 465 ILE B 403 REMARK 465 THR B 404 REMARK 465 LYS B 405 REMARK 465 GLN B 406 REMARK 465 MET B 407 REMARK 465 ILE B 408 REMARK 465 ILE B 409 REMARK 465 PRO B 410 REMARK 465 GLU B 411 REMARK 465 TYR B 412 REMARK 465 ALA B 413 REMARK 465 LEU B 414 REMARK 465 ILE B 415 REMARK 465 ASP B 416 REMARK 465 ASP B 433 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 TYR A 91 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 ASP A 336 CG OD1 OD2 REMARK 470 ARG A 419 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 21 CG CD OE1 OE2 REMARK 470 ARG B 83 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 91 CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 418 CG CD OE1 OE2 REMARK 470 ARG B 419 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 422 CG CD CE NZ REMARK 470 GLU B 424 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 501 O HOH B 661 2.08 REMARK 500 O HOH B 692 O HOH B 702 2.09 REMARK 500 O HOH A 893 O HOH A 953 2.11 REMARK 500 O HOH A 871 O HOH A 957 2.13 REMARK 500 O HOH A 797 O HOH A 848 2.13 REMARK 500 O HOH B 695 O HOH B 755 2.14 REMARK 500 OG SER A 208 O HOH A 501 2.15 REMARK 500 O HOH B 751 O HOH B 777 2.15 REMARK 500 O HOH B 785 O HOH B 788 2.18 REMARK 500 O HOH B 699 O HOH B 700 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 333 CA - C - N ANGL. DEV. = 17.6 DEGREES REMARK 500 THR A 333 O - C - N ANGL. DEV. = -19.4 DEGREES REMARK 500 LEU A 334 C - N - CA ANGL. DEV. = 27.2 DEGREES REMARK 500 LEU A 334 CA - C - N ANGL. DEV. = -25.3 DEGREES REMARK 500 LEU A 334 O - C - N ANGL. DEV. = 24.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 165 57.43 -115.32 REMARK 500 GLN A 205 71.38 -117.35 REMARK 500 THR A 207 -167.91 -115.24 REMARK 500 ASP A 262 -136.50 65.23 REMARK 500 PHE A 264 89.28 -163.90 REMARK 500 LYS A 335 117.68 -178.47 REMARK 500 ALA A 355 32.11 -148.85 REMARK 500 LYS B 87 51.64 -98.46 REMARK 500 ASN B 228 41.82 -101.54 REMARK 500 GLU B 229 -52.45 -129.65 REMARK 500 ASP B 262 -137.66 58.17 REMARK 500 PHE B 264 92.12 -161.87 REMARK 500 ALA B 355 39.93 -142.53 REMARK 500 GLU B 424 35.83 -93.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 983 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 984 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B 756 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 757 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 758 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 759 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 760 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 761 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B 762 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B 763 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 764 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B 765 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH B 766 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH B 767 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH B 768 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B 769 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH B 770 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH B 771 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH B 772 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH B 773 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH B 774 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH B 775 DISTANCE = 7.18 ANGSTROMS REMARK 525 HOH B 776 DISTANCE = 7.32 ANGSTROMS REMARK 525 HOH B 777 DISTANCE = 7.36 ANGSTROMS REMARK 525 HOH B 778 DISTANCE = 7.54 ANGSTROMS REMARK 525 HOH B 779 DISTANCE = 7.56 ANGSTROMS REMARK 525 HOH B 780 DISTANCE = 7.57 ANGSTROMS REMARK 525 HOH B 781 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH B 782 DISTANCE = 7.81 ANGSTROMS REMARK 525 HOH B 783 DISTANCE = 7.91 ANGSTROMS REMARK 525 HOH B 784 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH B 785 DISTANCE = 7.94 ANGSTROMS REMARK 525 HOH B 786 DISTANCE = 7.98 ANGSTROMS REMARK 525 HOH B 787 DISTANCE = 8.24 ANGSTROMS REMARK 525 HOH B 788 DISTANCE = 8.29 ANGSTROMS REMARK 525 HOH B 789 DISTANCE = 8.37 ANGSTROMS REMARK 525 HOH B 790 DISTANCE = 8.55 ANGSTROMS REMARK 525 HOH B 791 DISTANCE = 8.70 ANGSTROMS REMARK 525 HOH B 792 DISTANCE = 8.73 ANGSTROMS REMARK 525 HOH B 793 DISTANCE = 8.98 ANGSTROMS REMARK 525 HOH B 794 DISTANCE = 8.98 ANGSTROMS REMARK 525 HOH B 795 DISTANCE = 9.04 ANGSTROMS REMARK 525 HOH B 796 DISTANCE = 9.07 ANGSTROMS REMARK 525 HOH B 797 DISTANCE = 9.43 ANGSTROMS REMARK 525 HOH B 798 DISTANCE = 9.62 ANGSTROMS REMARK 525 HOH B 799 DISTANCE = 9.86 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FHD RELATED DB: PDB REMARK 900 RELATED ID: 5FHE RELATED DB: PDB REMARK 900 RELATED ID: 5FHF RELATED DB: PDB REMARK 900 RELATED ID: 5FHH RELATED DB: PDB DBREF 5FHG A 1 433 UNP D1JM21 D1JM21_9BACE 1 433 DBREF 5FHG B 1 433 UNP D1JM21 D1JM21_9BACE 1 433 SEQRES 1 A 433 MET GLU ASP MET ILE LEU THR GLU GLU MET GLN LYS ILE SEQRES 2 A 433 MET ASN LEU ILE GLN ASP ASP GLU ASN ASN VAL PHE VAL SEQRES 3 A 433 THR GLY LYS ALA GLY SER GLY LYS THR THR PHE LEU LYS SEQRES 4 A 433 TYR LEU ILE GLU LYS SER GLY LYS ASN CYS ILE VAL ALA SEQRES 5 A 433 ALA PRO THR GLY ILE ALA ALA ILE ASN ALA GLY GLY VAL SEQRES 6 A 433 THR LEU HIS SER LEU PHE GLY ILE PRO PHE GLY PRO ILE SEQRES 7 A 433 THR PRO TYR ASP ARG LEU GLU ASN LYS PHE SER GLU TYR SEQRES 8 A 433 LYS VAL GLU LEU LEU LEU LYS MET GLU LEU LEU ILE ILE SEQRES 9 A 433 ASP GLU ILE SER MET VAL ARG PRO ASP ILE LEU ASP THR SEQRES 10 A 433 ILE ASP ARG LYS LEU ARG TRP VAL TYR GLU SER ASP GLU SEQRES 11 A 433 PRO PHE GLY GLY VAL GLN VAL VAL MET PHE GLY ASP LEU SEQRES 12 A 433 PHE GLN LEU PRO PRO VAL THR LYS LYS GLN GLU ARG GLU SEQRES 13 A 433 ILE LEU SER ASP PHE TYR ASP GLY PHE PHE PHE PHE ASN SEQRES 14 A 433 ALA LEU VAL PHE LYS ARG THR GLY PHE HIS ILE VAL GLU SEQRES 15 A 433 LEU THR LYS ILE PHE ARG GLN THR GLU PRO GLU PHE ILE SEQRES 16 A 433 ASN VAL LEU ASN ASN ILE ARG ASN TYR GLN VAL THR SER SEQRES 17 A 433 ASP GLU LEU ASP LEU LEU SER GLU LEU LYS ASP ARG LYS SEQRES 18 A 433 ILE SER SER SER TYR ASP ASN GLU TYR ILE HIS ILE CYS SEQRES 19 A 433 THR HIS LYS ALA ASP VAL GLU LYS ILE ASN ALA ASP LYS SEQRES 20 A 433 LEU GLY GLU GLN GLU ILE ARG ASN TYR ASP ILE VAL ILE SEQRES 21 A 433 LYS ASP LYS PHE PRO GLU SER SER ILE PRO CYS ASP LEU SEQRES 22 A 433 HIS LEU LYS LEU ARG VAL GLY ALA ARG VAL MET SER LEU SEQRES 23 A 433 VAL ASN ASP SER LEU LYS GLY TYR TYR ASN GLY MET LEU SEQRES 24 A 433 GLY ILE VAL THR ALA LEU GLU ASP ASN VAL ILE THR VAL SEQRES 25 A 433 ARG MET ASP ASN GLY ARG THR ILE LYS PHE GLU ARG TYR SEQRES 26 A 433 THR TRP SER ASN THR GLN TYR THR LEU LYS ASP ASN GLU SEQRES 27 A 433 ILE VAL LYS GLU GLU ILE GLY SER CYS THR GLN PHE PRO SEQRES 28 A 433 LEU THR LEU ALA TRP ALA ILE THR ILE HIS LYS SER GLN SEQRES 29 A 433 GLY LEU THR PHE ASP LYS ILE ILE ILE HIS VAL SER HIS SEQRES 30 A 433 THR PHE CYS PRO GLY GLN LEU TYR VAL ALA LEU SER ARG SEQRES 31 A 433 CYS ARG THR LEU GLU GLY ILE VAL SER ASP ALA PHE ILE SEQRES 32 A 433 THR LYS GLN MET ILE ILE PRO GLU TYR ALA LEU ILE ASP SEQRES 33 A 433 PHE GLU ARG ALA TYR LYS SER GLU GLY ASN TYR TYR GLY SEQRES 34 A 433 LYS ARG LEU ASP SEQRES 1 B 433 MET GLU ASP MET ILE LEU THR GLU GLU MET GLN LYS ILE SEQRES 2 B 433 MET ASN LEU ILE GLN ASP ASP GLU ASN ASN VAL PHE VAL SEQRES 3 B 433 THR GLY LYS ALA GLY SER GLY LYS THR THR PHE LEU LYS SEQRES 4 B 433 TYR LEU ILE GLU LYS SER GLY LYS ASN CYS ILE VAL ALA SEQRES 5 B 433 ALA PRO THR GLY ILE ALA ALA ILE ASN ALA GLY GLY VAL SEQRES 6 B 433 THR LEU HIS SER LEU PHE GLY ILE PRO PHE GLY PRO ILE SEQRES 7 B 433 THR PRO TYR ASP ARG LEU GLU ASN LYS PHE SER GLU TYR SEQRES 8 B 433 LYS VAL GLU LEU LEU LEU LYS MET GLU LEU LEU ILE ILE SEQRES 9 B 433 ASP GLU ILE SER MET VAL ARG PRO ASP ILE LEU ASP THR SEQRES 10 B 433 ILE ASP ARG LYS LEU ARG TRP VAL TYR GLU SER ASP GLU SEQRES 11 B 433 PRO PHE GLY GLY VAL GLN VAL VAL MET PHE GLY ASP LEU SEQRES 12 B 433 PHE GLN LEU PRO PRO VAL THR LYS LYS GLN GLU ARG GLU SEQRES 13 B 433 ILE LEU SER ASP PHE TYR ASP GLY PHE PHE PHE PHE ASN SEQRES 14 B 433 ALA LEU VAL PHE LYS ARG THR GLY PHE HIS ILE VAL GLU SEQRES 15 B 433 LEU THR LYS ILE PHE ARG GLN THR GLU PRO GLU PHE ILE SEQRES 16 B 433 ASN VAL LEU ASN ASN ILE ARG ASN TYR GLN VAL THR SER SEQRES 17 B 433 ASP GLU LEU ASP LEU LEU SER GLU LEU LYS ASP ARG LYS SEQRES 18 B 433 ILE SER SER SER TYR ASP ASN GLU TYR ILE HIS ILE CYS SEQRES 19 B 433 THR HIS LYS ALA ASP VAL GLU LYS ILE ASN ALA ASP LYS SEQRES 20 B 433 LEU GLY GLU GLN GLU ILE ARG ASN TYR ASP ILE VAL ILE SEQRES 21 B 433 LYS ASP LYS PHE PRO GLU SER SER ILE PRO CYS ASP LEU SEQRES 22 B 433 HIS LEU LYS LEU ARG VAL GLY ALA ARG VAL MET SER LEU SEQRES 23 B 433 VAL ASN ASP SER LEU LYS GLY TYR TYR ASN GLY MET LEU SEQRES 24 B 433 GLY ILE VAL THR ALA LEU GLU ASP ASN VAL ILE THR VAL SEQRES 25 B 433 ARG MET ASP ASN GLY ARG THR ILE LYS PHE GLU ARG TYR SEQRES 26 B 433 THR TRP SER ASN THR GLN TYR THR LEU LYS ASP ASN GLU SEQRES 27 B 433 ILE VAL LYS GLU GLU ILE GLY SER CYS THR GLN PHE PRO SEQRES 28 B 433 LEU THR LEU ALA TRP ALA ILE THR ILE HIS LYS SER GLN SEQRES 29 B 433 GLY LEU THR PHE ASP LYS ILE ILE ILE HIS VAL SER HIS SEQRES 30 B 433 THR PHE CYS PRO GLY GLN LEU TYR VAL ALA LEU SER ARG SEQRES 31 B 433 CYS ARG THR LEU GLU GLY ILE VAL SER ASP ALA PHE ILE SEQRES 32 B 433 THR LYS GLN MET ILE ILE PRO GLU TYR ALA LEU ILE ASP SEQRES 33 B 433 PHE GLU ARG ALA TYR LYS SER GLU GLY ASN TYR TYR GLY SEQRES 34 B 433 LYS ARG LEU ASP FORMUL 3 HOH *783(H2 O) HELIX 1 AA1 THR A 7 ASP A 19 1 13 HELIX 2 AA2 GLY A 33 LYS A 44 1 12 HELIX 3 AA3 THR A 55 GLY A 63 1 9 HELIX 4 AA4 LEU A 67 GLY A 72 1 6 HELIX 5 AA5 SER A 89 MET A 99 1 11 HELIX 6 AA6 GLU A 106 VAL A 110 5 5 HELIX 7 AA7 ARG A 111 GLU A 127 1 17 HELIX 8 AA8 GLU A 130 VAL A 135 5 6 HELIX 9 AA9 LYS A 151 ASP A 160 1 10 HELIX 10 AB1 PHE A 166 ARG A 175 5 10 HELIX 11 AB2 GLU A 191 ASN A 203 1 13 HELIX 12 AB3 THR A 207 SER A 215 1 9 HELIX 13 AB4 ASP A 219 SER A 224 1 6 HELIX 14 AB5 HIS A 236 GLY A 249 1 14 HELIX 15 AB6 PRO A 265 ILE A 269 5 5 HELIX 16 AB7 GLY A 382 ARG A 390 1 9 HELIX 17 AB8 THR A 393 GLU A 395 5 3 HELIX 18 AB9 THR A 404 ILE A 409 5 6 HELIX 19 AC1 GLU A 411 GLU A 424 1 14 HELIX 20 AC2 THR B 55 GLY B 63 1 9 HELIX 21 AC3 LEU B 67 PHE B 71 1 5 HELIX 22 AC4 SER B 89 MET B 99 1 11 HELIX 23 AC5 GLU B 106 VAL B 110 5 5 HELIX 24 AC6 ARG B 111 GLU B 127 1 17 HELIX 25 AC7 GLU B 130 VAL B 135 5 6 HELIX 26 AC8 PHE B 166 ARG B 175 5 10 HELIX 27 AC9 HIS B 236 GLY B 249 1 14 HELIX 28 AD1 PRO B 265 ILE B 269 5 5 HELIX 29 AD2 VAL B 386 ARG B 390 1 5 HELIX 30 AD3 GLU B 418 GLU B 424 1 7 SHEET 1 AA1 7 VAL A 65 THR A 66 0 SHEET 2 AA1 7 CYS A 49 ALA A 53 1 N VAL A 51 O VAL A 65 SHEET 3 AA1 7 LEU A 101 ILE A 104 1 O ILE A 103 N ALA A 52 SHEET 4 AA1 7 GLN A 136 GLY A 141 1 O PHE A 140 N ILE A 104 SHEET 5 AA1 7 VAL A 24 THR A 27 1 N VAL A 26 O MET A 139 SHEET 6 AA1 7 GLY A 177 GLU A 182 1 O HIS A 179 N PHE A 25 SHEET 7 AA1 7 TYR A 427 GLY A 429 -1 O TYR A 428 N PHE A 178 SHEET 1 AA2 4 ALA A 357 THR A 359 0 SHEET 2 AA2 4 ILE A 231 CYS A 234 1 N HIS A 232 O ILE A 358 SHEET 3 AA2 4 ILE A 371 ILE A 373 1 O ILE A 372 N ILE A 233 SHEET 4 AA2 4 ILE A 397 SER A 399 1 O VAL A 398 N ILE A 373 SHEET 1 AA3 2 ARG A 254 ASP A 257 0 SHEET 2 AA3 2 HIS A 274 LEU A 277 -1 O LEU A 277 N ARG A 254 SHEET 1 AA4 3 VAL A 259 ASP A 262 0 SHEET 2 AA4 3 ILE A 339 GLN A 349 -1 O SER A 346 N LYS A 261 SHEET 3 AA4 3 TYR A 325 LEU A 334 -1 N ASN A 329 O ILE A 344 SHEET 1 AA5 5 THR A 319 PHE A 322 0 SHEET 2 AA5 5 ILE A 310 MET A 314 -1 N VAL A 312 O ILE A 320 SHEET 3 AA5 5 LEU A 299 LEU A 305 -1 N THR A 303 O THR A 311 SHEET 4 AA5 5 ARG A 282 SER A 285 -1 N VAL A 283 O GLY A 300 SHEET 5 AA5 5 LEU A 352 LEU A 354 -1 O THR A 353 N MET A 284 SHEET 1 AA6 7 VAL B 65 THR B 66 0 SHEET 2 AA6 7 CYS B 49 ALA B 53 1 N VAL B 51 O VAL B 65 SHEET 3 AA6 7 LEU B 101 ILE B 104 1 O ILE B 103 N ALA B 52 SHEET 4 AA6 7 GLN B 136 PHE B 140 1 O GLN B 136 N LEU B 102 SHEET 5 AA6 7 VAL B 24 VAL B 26 1 N VAL B 26 O MET B 139 SHEET 6 AA6 7 GLY B 177 VAL B 181 1 O HIS B 179 N PHE B 25 SHEET 7 AA6 7 TYR B 427 GLY B 429 -1 O TYR B 428 N PHE B 178 SHEET 1 AA7 4 ALA B 357 THR B 359 0 SHEET 2 AA7 4 ILE B 231 CYS B 234 1 N HIS B 232 O ILE B 358 SHEET 3 AA7 4 ILE B 371 ILE B 373 1 O ILE B 372 N ILE B 233 SHEET 4 AA7 4 ILE B 397 SER B 399 1 O VAL B 398 N ILE B 373 SHEET 1 AA8 2 ARG B 254 ASP B 257 0 SHEET 2 AA8 2 HIS B 274 LEU B 277 -1 O LEU B 277 N ARG B 254 SHEET 1 AA9 3 VAL B 259 ASP B 262 0 SHEET 2 AA9 3 VAL B 340 GLN B 349 -1 O SER B 346 N LYS B 261 SHEET 3 AA9 3 TYR B 325 THR B 333 -1 N ASN B 329 O GLY B 345 SHEET 1 AB1 5 THR B 319 PHE B 322 0 SHEET 2 AB1 5 ILE B 310 MET B 314 -1 N ILE B 310 O PHE B 322 SHEET 3 AB1 5 LEU B 299 LEU B 305 -1 N THR B 303 O THR B 311 SHEET 4 AB1 5 ARG B 282 SER B 285 -1 N VAL B 283 O GLY B 300 SHEET 5 AB1 5 LEU B 352 LEU B 354 -1 O THR B 353 N MET B 284 CISPEP 1 LYS A 335 ASP A 336 0 3.49 CRYST1 123.485 123.485 66.477 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008098 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008098 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015043 0.00000