HEADER HYDROLASE 15-OCT-15 5FKC TITLE STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES TITLE 2 DENDRORHOUS COMPLEXED WITH RAFFINOSE CAVEAT 5FKC MAN G 4 HAS WRONG CHIRALITY AT ATOM C1 MAN H 8 HAS WRONG CAVEAT 2 5FKC CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-FRUCTOFURANOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.26; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOPHYLLOMYCES DENDRORHOUS; SOURCE 3 ORGANISM_TAXID: 5421; SOURCE 4 ATCC: ATCC MYA-131; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS GS115; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 644223; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PIB4 KEYWDS HYDROLASE, AMINO ACID SEQUENCE, CARBOHYDRATES, CATALYSIS, CATALYTIC KEYWDS 2 DOMAIN, CLONING, DIMERIZATION, QUATERNARY, PICHIA PASTORIS, KEYWDS 3 GLYCOSIDE HYDROLASES, FUNGAL PROTEINS, KINETICS, MOLECULAR, KEYWDS 4 MOLECULAR CONFORMATION, PROTEIN CONFORMATION, PROTEIN STRUCTURE, KEYWDS 5 SECONDARY, SUBSTRATE SPECIFICITY, BETA-FRUCTOFURANOSIDASE, KEYWDS 6 INVERTASE, PREBIOTICS, RAFFINOSE EXPDTA X-RAY DIFFRACTION AUTHOR M.RAMIREZ-ESCUDERO,J.SANZ-APARICIO REVDAT 5 10-JAN-24 5FKC 1 HETSYN REVDAT 4 29-JUL-20 5FKC 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 07-MAR-18 5FKC 1 SOURCE REMARK REVDAT 2 06-APR-16 5FKC 1 JRNL REVDAT 1 10-FEB-16 5FKC 0 JRNL AUTH M.RAMIREZ-ESCUDERO,M.GIMENO-PEREZ,B.GONZALEZ,D.LINDE, JRNL AUTH 2 Z.MERDZO,M.FERNANDEZ-LOBATO,J.SANZ-APARICIO JRNL TITL STRUCTURAL ANALYSIS OF BETA-FRUCTOFURANOSIDASE FROM JRNL TITL 2 XANTHOPHYLLOMYCES DENDRORHOUS REVEALS UNIQUE FEATURES AND JRNL TITL 3 THE CRUCIAL ROLE OF N-GLYCOSYLATION IN OLIGOMERIZATION AND JRNL TITL 4 ACTIVITY JRNL REF J.BIOL.CHEM. V. 291 6843 2016 JRNL REFN ISSN 0021-9258 JRNL PMID 26823463 JRNL DOI 10.1074/JBC.M115.708495 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 119.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 190031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10026 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 13881 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 753 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 878 REMARK 3 SOLVENT ATOMS : 1597 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.66000 REMARK 3 B22 (A**2) : -2.54000 REMARK 3 B33 (A**2) : 0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.270 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10829 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 9384 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14885 ; 1.402 ; 2.025 REMARK 3 BOND ANGLES OTHERS (DEGREES): 21763 ; 1.144 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1250 ; 6.789 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 452 ;35.821 ;24.248 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1388 ;10.247 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;17.768 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1776 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11840 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2412 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5000 ; 0.931 ; 2.350 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4999 ; 0.931 ; 2.350 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6250 ; 1.440 ; 3.520 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5827 ; 1.685 ; 2.739 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 8636 ; 2.737 ; 4.054 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 42 665 B 42 665 74206 0.04 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY, RESIDUES 1-41 ARE REMARK 3 DISORDERED REMARK 4 REMARK 4 5FKC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1290065312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 200149 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 119.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5ANN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 1.3M REMARK 280 SODIUM CITRATE TRIBASIC DIHYDRATE, 0.1M BIS-TRIS PROPANE PH 6.5, REMARK 280 THEN SOAKED IN 30MM RAFFINOSE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.31050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 102.38350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.31050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 102.38350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2860 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 LYS A 7 REMARK 465 THR A 8 REMARK 465 LEU A 9 REMARK 465 PRO A 10 REMARK 465 PHE A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 TYR A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 ASP A 21 REMARK 465 LEU A 22 REMARK 465 PRO A 23 REMARK 465 ASN A 24 REMARK 465 PHE A 25 REMARK 465 SER A 26 REMARK 465 ALA A 27 REMARK 465 LEU A 28 REMARK 465 ASN A 29 REMARK 465 ARG A 30 REMARK 465 ARG A 31 REMARK 465 GLN A 32 REMARK 465 ASP A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 THR A 36 REMARK 465 SER A 37 REMARK 465 SER A 38 REMARK 465 SER A 39 REMARK 465 ALA A 40 REMARK 465 GLY A 41 REMARK 465 ALA B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 LEU B 6 REMARK 465 LYS B 7 REMARK 465 THR B 8 REMARK 465 LEU B 9 REMARK 465 PRO B 10 REMARK 465 PHE B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 TYR B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 GLU B 19 REMARK 465 LEU B 20 REMARK 465 ASP B 21 REMARK 465 LEU B 22 REMARK 465 PRO B 23 REMARK 465 ASN B 24 REMARK 465 PHE B 25 REMARK 465 SER B 26 REMARK 465 ALA B 27 REMARK 465 LEU B 28 REMARK 465 ASN B 29 REMARK 465 ARG B 30 REMARK 465 ARG B 31 REMARK 465 GLN B 32 REMARK 465 ASP B 33 REMARK 465 ASN B 34 REMARK 465 SER B 35 REMARK 465 THR B 36 REMARK 465 SER B 37 REMARK 465 SER B 38 REMARK 465 SER B 39 REMARK 465 ALA B 40 REMARK 465 GLY B 41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2855 O HOH A 2855 2555 1.63 REMARK 500 O HOH B 2681 O HOH B 2681 2555 1.67 REMARK 500 O4 MAN D 8 O4 MAN D 8 2555 1.79 REMARK 500 O HOH B 2690 O HOH B 2690 2555 1.89 REMARK 500 O4 MAN H 8 O4 MAN H 8 2555 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 79 -117.26 -136.98 REMARK 500 ASN A 107 47.32 37.27 REMARK 500 ASP A 117 21.33 -144.21 REMARK 500 PHE A 118 -1.50 64.14 REMARK 500 THR A 119 -50.60 -123.44 REMARK 500 SER A 136 -3.87 -151.10 REMARK 500 SER A 166 -159.94 -126.38 REMARK 500 SER A 166 -160.38 -126.38 REMARK 500 GLN A 204 -144.81 -134.57 REMARK 500 PHE A 219 76.21 -160.87 REMARK 500 TYR A 287 109.89 -57.82 REMARK 500 ASP A 397 62.99 -118.41 REMARK 500 ASP A 398 57.91 -141.76 REMARK 500 ALA A 438 -71.58 -65.73 REMARK 500 ASN A 483 -152.29 -135.65 REMARK 500 ARG A 499 31.89 -92.88 REMARK 500 GLU A 593 -58.02 -148.75 REMARK 500 LEU A 634 -142.13 56.40 REMARK 500 ASN B 79 -117.04 -135.81 REMARK 500 ASN B 107 47.54 36.10 REMARK 500 ASP B 117 21.51 -143.81 REMARK 500 PHE B 118 -1.21 63.25 REMARK 500 THR B 119 -51.00 -123.49 REMARK 500 SER B 136 -4.56 -150.32 REMARK 500 SER B 166 -159.58 -124.86 REMARK 500 SER B 166 -161.25 -124.86 REMARK 500 GLN B 204 -145.37 -134.22 REMARK 500 PHE B 219 75.86 -160.11 REMARK 500 ASP B 397 62.96 -118.53 REMARK 500 ASP B 398 56.86 -141.57 REMARK 500 ALA B 438 -140.18 -158.99 REMARK 500 ASN B 483 -152.58 -135.66 REMARK 500 ASP B 498 -169.91 -167.49 REMARK 500 ARG B 499 32.46 -93.43 REMARK 500 GLU B 593 -56.99 -148.73 REMARK 500 LEU B 634 -141.23 56.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2189 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A2291 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A2415 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B2194 DISTANCE = 6.20 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 RAFFINOSE, REMARK 600 PUBCHEM ENTRY CID 439242, REMARK 600 0-B-D-FRUCTOFURANOSYL-2-1-A-D-GLUCOPYRANOSYL-6-1-A-D-GALACTOPYRANOS REMARK 600 SPLIT INTO FRU-GLC-GLA REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ANN RELATED DB: PDB REMARK 900 STRUCTURE OF FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES DENDRORHOUS REMARK 900 RELATED ID: 5FIX RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH SUCROSE REMARK 900 RELATED ID: 5FK7 RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH NEOKESTOSE REMARK 900 RELATED ID: 5FK8 RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH NEO-ERLOSE REMARK 900 RELATED ID: 5FKB RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH 1-KESTOSE REMARK 900 RELATED ID: 5FKC RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH RAFFINOSE REMARK 900 RELATED ID: 5FMB RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH FRUCTOSE AND HEPES BUFFER REMARK 900 RELATED ID: 5FMC RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH FRUCTOSE AND BIS-TRIS PROPANE BUFFER REMARK 900 RELATED ID: 5FMD RELATED DB: PDB REMARK 900 STRUCTURE OF D80A-FRUCTOFURANOSIDASE FROM XANTHOPHYLLOMYCES REMARK 900 DENDRORHOUS COMPLEXED WITH NYSTOSE DBREF 5FKC A 3 665 UNP J7HDY4 J7HDY4_PHARH 3 665 DBREF 5FKC B 3 665 UNP J7HDY4 J7HDY4_PHARH 3 665 SEQADV 5FKC ALA A 663 UNP J7HDY4 SER 663 CONFLICT SEQADV 5FKC TYR A 665 UNP J7HDY4 ARG 665 CONFLICT SEQADV 5FKC ALA A 80 UNP J7HDY4 ASP 80 ENGINEERED MUTATION SEQADV 5FKC ALA B 663 UNP J7HDY4 SER 663 CONFLICT SEQADV 5FKC TYR B 665 UNP J7HDY4 ARG 665 CONFLICT SEQADV 5FKC ALA B 80 UNP J7HDY4 ASP 80 ENGINEERED MUTATION SEQRES 1 A 663 ALA PRO LEU LEU LYS THR LEU PRO PHE LEU ALA ALA ALA SEQRES 2 A 663 TYR ALA ALA GLU LEU ASP LEU PRO ASN PHE SER ALA LEU SEQRES 3 A 663 ASN ARG ARG GLN ASP ASN SER THR SER SER SER ALA GLY SEQRES 4 A 663 CYS SER LEU ASP GLN THR VAL ALA PRO GLY ASN LEU THR SEQRES 5 A 663 LEU CYS GLY ASN ALA THR LEU PHE THR THR PHE ARG PRO SEQRES 6 A 663 LYS ALA ARG PHE ILE ALA PRO GLU GLY TRP MET ASN ALA SEQRES 7 A 663 PRO MET GLY LEU TYR GLN ARG ALA ASP GLY SER ILE HIS SEQRES 8 A 663 ALA GLY TYR GLN SER HIS PRO LYS HIS ILE GLN TRP GLY SEQRES 9 A 663 ASN ILE SER GLN GLY ALA ALA TYR SER SER ASP PHE THR SEQRES 10 A 663 SER TRP THR ASP PHE ASN GLY SER GLU GLY TYR LYS THR SEQRES 11 A 663 ILE TRP PRO SER GLN ILE TYR ASP ILE ARG GLY VAL PHE SEQRES 12 A 663 ASP GLY SER ILE ILE LYS GLU GLY ILE ASP GLY TYR PRO SEQRES 13 A 663 THR ILE LEU TYR THR SER THR SER PHE GLY PRO LEU GLY SEQRES 14 A 663 ALA THR LEU ASN GLU ALA GLU GLY THR GLU THR GLN SER SEQRES 15 A 663 LEU ALA TYR THR THR ASP ASP GLY ALA SER TRP ILE LYS SEQRES 16 A 663 LEU GLY TYR GLY ALA GLY GLN ASN PRO VAL ILE TYR GLU SEQRES 17 A 663 TRP PRO GLU THR ASN LEU THR GLY PHE ARG ASP PRO TYR SEQRES 18 A 663 VAL PHE GLN SER PRO ARG LEU GLU ALA LEU LEU ALA ASN SEQRES 19 A 663 THR THR SER ILE THR ASN ALA THR GLY ASP HIS PHE ALA SEQRES 20 A 663 THR ILE SER GLY GLY VAL HIS GLY ASP GLY ALA ARG LEU SEQRES 21 A 663 PHE LEU TYR ARG GLN HIS THR THR GLY GLU PHE ILE LYS SEQRES 22 A 663 TRP THR TYR LEU GLY PRO LEU VAL THR THR GLY TYR LYS SEQRES 23 A 663 GLU SER TYR GLY GLU TRP SER GLY ASN TYR GLY ILE ASN SEQRES 24 A 663 PHE GLU THR ALA GLY VAL THR ARG LEU ASN PRO ALA GLY SEQRES 25 A 663 ALA ALA TRP ASP ASN GLY SER ASP THR THR ALA VAL ASP SEQRES 26 A 663 PHE VAL THR PHE GLY THR GLU GLN GLY ARG ALA ASP HIS SEQRES 27 A 663 GLN ASN HIS TRP PRO LEU TRP ALA ALA VAL ASP TYR GLU SEQRES 28 A 663 VAL ARG ASP ASN GLY SER ILE GLU ALA VAL ILE ALA TYR SEQRES 29 A 663 SER GLY VAL GLN ASP TRP GLY ARG SER TYR ALA TYR ALA SEQRES 30 A 663 SER PHE PRO VAL GLU GLY TYR ARG GLN VAL SER VAL GLY SEQRES 31 A 663 TRP ILE TYR GLU ASP ASP ASP ASN VAL ILE LEU ALA LYS SEQRES 32 A 663 GLN PHE GLY TYR GLN GLY ALA PHE THR LEU PHE ARG ASP SEQRES 33 A 663 LEU PHE VAL LYS VAL VAL GLU ASN VAL SER PRO SER THR SEQRES 34 A 663 PRO GLY LEU PHE GLU GLN ALA SER TRP SER THR LYS ASN SEQRES 35 A 663 SER THR ASP GLY MET SER VAL THR VAL THR THR LEU GLY SEQRES 36 A 663 GLN ARG VAL VAL PRO GLU THR LEU ALA ALA TYR LYS GLY SEQRES 37 A 663 ASN SER THR VAL SER THR LEU ALA PRO VAL MET LEU ASN SEQRES 38 A 663 GLU SER ALA ALA ALA TYR THR PRO PHE SER SER GLN PRO SEQRES 39 A 663 THR ASP ARG PHE TYR ALA LEU THR GLY SER PHE GLU PHE SEQRES 40 A 663 GLY LEU ASN THR THR ALA LYS ALA GLY PHE ARG VAL LEU SEQRES 41 A 663 ALA SER GLU GLU GLU TYR THR ASP ILE TRP PHE ASP PRO SEQRES 42 A 663 ALA SER GLU ASN LEU THR VAL VAL ARG THR ALA SER SER SEQRES 43 A 663 LEU ILE LYS SER PHE GLY ASN ASP THR GLU LEU ALA LYS SEQRES 44 A 663 VAL LYS LEU TYR GLU ILE VAL GLY ALA GLU SER LYS THR SEQRES 45 A 663 LEU ASN LEU THR VAL PHE VAL ASP GLY SER VAL ILE GLU SEQRES 46 A 663 ILE TYR ALA ASN ASP GLU VAL ALA LEU SER THR ARG ALA SEQRES 47 A 663 TYR PRO TRP LEU ALA ASN SER THR GLY ALA GLY LEU LEU SEQRES 48 A 663 ALA ASP GLY THR THR ALA GLY ASP VAL VAL GLY VAL SER SEQRES 49 A 663 GLY LEU GLU LEU TRP ASP GLY LEU VAL ASP ALA TRP PRO SEQRES 50 A 663 ALA ARG PRO ALA ASN THR SER GLN GLY LEU VAL TRP ASP SEQRES 51 A 663 GLY PRO THR ALA ALA MET TYR GLY LEU PHE ALA GLY TYR SEQRES 1 B 663 ALA PRO LEU LEU LYS THR LEU PRO PHE LEU ALA ALA ALA SEQRES 2 B 663 TYR ALA ALA GLU LEU ASP LEU PRO ASN PHE SER ALA LEU SEQRES 3 B 663 ASN ARG ARG GLN ASP ASN SER THR SER SER SER ALA GLY SEQRES 4 B 663 CYS SER LEU ASP GLN THR VAL ALA PRO GLY ASN LEU THR SEQRES 5 B 663 LEU CYS GLY ASN ALA THR LEU PHE THR THR PHE ARG PRO SEQRES 6 B 663 LYS ALA ARG PHE ILE ALA PRO GLU GLY TRP MET ASN ALA SEQRES 7 B 663 PRO MET GLY LEU TYR GLN ARG ALA ASP GLY SER ILE HIS SEQRES 8 B 663 ALA GLY TYR GLN SER HIS PRO LYS HIS ILE GLN TRP GLY SEQRES 9 B 663 ASN ILE SER GLN GLY ALA ALA TYR SER SER ASP PHE THR SEQRES 10 B 663 SER TRP THR ASP PHE ASN GLY SER GLU GLY TYR LYS THR SEQRES 11 B 663 ILE TRP PRO SER GLN ILE TYR ASP ILE ARG GLY VAL PHE SEQRES 12 B 663 ASP GLY SER ILE ILE LYS GLU GLY ILE ASP GLY TYR PRO SEQRES 13 B 663 THR ILE LEU TYR THR SER THR SER PHE GLY PRO LEU GLY SEQRES 14 B 663 ALA THR LEU ASN GLU ALA GLU GLY THR GLU THR GLN SER SEQRES 15 B 663 LEU ALA TYR THR THR ASP ASP GLY ALA SER TRP ILE LYS SEQRES 16 B 663 LEU GLY TYR GLY ALA GLY GLN ASN PRO VAL ILE TYR GLU SEQRES 17 B 663 TRP PRO GLU THR ASN LEU THR GLY PHE ARG ASP PRO TYR SEQRES 18 B 663 VAL PHE GLN SER PRO ARG LEU GLU ALA LEU LEU ALA ASN SEQRES 19 B 663 THR THR SER ILE THR ASN ALA THR GLY ASP HIS PHE ALA SEQRES 20 B 663 THR ILE SER GLY GLY VAL HIS GLY ASP GLY ALA ARG LEU SEQRES 21 B 663 PHE LEU TYR ARG GLN HIS THR THR GLY GLU PHE ILE LYS SEQRES 22 B 663 TRP THR TYR LEU GLY PRO LEU VAL THR THR GLY TYR LYS SEQRES 23 B 663 GLU SER TYR GLY GLU TRP SER GLY ASN TYR GLY ILE ASN SEQRES 24 B 663 PHE GLU THR ALA GLY VAL THR ARG LEU ASN PRO ALA GLY SEQRES 25 B 663 ALA ALA TRP ASP ASN GLY SER ASP THR THR ALA VAL ASP SEQRES 26 B 663 PHE VAL THR PHE GLY THR GLU GLN GLY ARG ALA ASP HIS SEQRES 27 B 663 GLN ASN HIS TRP PRO LEU TRP ALA ALA VAL ASP TYR GLU SEQRES 28 B 663 VAL ARG ASP ASN GLY SER ILE GLU ALA VAL ILE ALA TYR SEQRES 29 B 663 SER GLY VAL GLN ASP TRP GLY ARG SER TYR ALA TYR ALA SEQRES 30 B 663 SER PHE PRO VAL GLU GLY TYR ARG GLN VAL SER VAL GLY SEQRES 31 B 663 TRP ILE TYR GLU ASP ASP ASP ASN VAL ILE LEU ALA LYS SEQRES 32 B 663 GLN PHE GLY TYR GLN GLY ALA PHE THR LEU PHE ARG ASP SEQRES 33 B 663 LEU PHE VAL LYS VAL VAL GLU ASN VAL SER PRO SER THR SEQRES 34 B 663 PRO GLY LEU PHE GLU GLN ALA SER TRP SER THR LYS ASN SEQRES 35 B 663 SER THR ASP GLY MET SER VAL THR VAL THR THR LEU GLY SEQRES 36 B 663 GLN ARG VAL VAL PRO GLU THR LEU ALA ALA TYR LYS GLY SEQRES 37 B 663 ASN SER THR VAL SER THR LEU ALA PRO VAL MET LEU ASN SEQRES 38 B 663 GLU SER ALA ALA ALA TYR THR PRO PHE SER SER GLN PRO SEQRES 39 B 663 THR ASP ARG PHE TYR ALA LEU THR GLY SER PHE GLU PHE SEQRES 40 B 663 GLY LEU ASN THR THR ALA LYS ALA GLY PHE ARG VAL LEU SEQRES 41 B 663 ALA SER GLU GLU GLU TYR THR ASP ILE TRP PHE ASP PRO SEQRES 42 B 663 ALA SER GLU ASN LEU THR VAL VAL ARG THR ALA SER SER SEQRES 43 B 663 LEU ILE LYS SER PHE GLY ASN ASP THR GLU LEU ALA LYS SEQRES 44 B 663 VAL LYS LEU TYR GLU ILE VAL GLY ALA GLU SER LYS THR SEQRES 45 B 663 LEU ASN LEU THR VAL PHE VAL ASP GLY SER VAL ILE GLU SEQRES 46 B 663 ILE TYR ALA ASN ASP GLU VAL ALA LEU SER THR ARG ALA SEQRES 47 B 663 TYR PRO TRP LEU ALA ASN SER THR GLY ALA GLY LEU LEU SEQRES 48 B 663 ALA ASP GLY THR THR ALA GLY ASP VAL VAL GLY VAL SER SEQRES 49 B 663 GLY LEU GLU LEU TRP ASP GLY LEU VAL ASP ALA TRP PRO SEQRES 50 B 663 ALA ARG PRO ALA ASN THR SER GLN GLY LEU VAL TRP ASP SEQRES 51 B 663 GLY PRO THR ALA ALA MET TYR GLY LEU PHE ALA GLY TYR MODRES 5FKC ASN A 52 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 58 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 107 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 125 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 215 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 236 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 242 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 319 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 357 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 444 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 471 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 483 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 512 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 539 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 555 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 576 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 606 ASN GLYCOSYLATION SITE MODRES 5FKC ASN A 644 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 52 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 58 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 107 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 125 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 215 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 242 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 319 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 357 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 444 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 471 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 483 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 539 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 555 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 576 ASN GLYCOSYLATION SITE MODRES 5FKC ASN B 644 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET MAN C 6 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET MAN D 6 11 HET MAN D 7 11 HET MAN D 8 11 HET MAN D 9 11 HET MAN D 10 11 HET NAG E 1 14 HET NAG E 2 14 HET FRU F 1 12 HET GLC F 2 11 HET GLA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET MAN G 6 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET MAN H 6 11 HET MAN H 7 11 HET MAN H 8 11 HET MAN H 9 11 HET MAN H 10 11 HET NAG I 1 14 HET NAG I 2 14 HET FRU J 1 12 HET GLC J 2 11 HET GLA J 3 11 HET NAG A1052 14 HET NAG A1125 14 HET NAG A1215 14 HET NAG A1236 14 HET NAG A1242 14 HET NAG A1319 14 HET NAG A1357 14 HET NAG A1444 14 HET NAG A1471 14 HET NAG A1483 14 HET NAG A1512 14 HET NAG A1539 14 HET NAG A1555 14 HET NAG A1606 14 HET NAG A1644 14 HET NAG B1052 14 HET NAG B1125 14 HET NAG B1215 14 HET NAG B1242 14 HET NAG B1319 14 HET NAG B1357 14 HET NAG B1444 14 HET NAG B1471 14 HET NAG B1483 14 HET NAG B1539 14 HET NAG B1555 14 HET NAG B1644 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FRU BETA-D-FRUCTOFURANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FRU BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE FORMUL 3 NAG 39(C8 H15 N O6) FORMUL 3 BMA 4(C6 H12 O6) FORMUL 3 MAN 20(C6 H12 O6) FORMUL 6 FRU 2(C6 H12 O6) FORMUL 6 GLC 2(C6 H12 O6) FORMUL 6 GLA 2(C6 H12 O6) FORMUL 38 HOH *1597(H2 O) HELIX 1 1 ASN A 52 CYS A 56 5 5 HELIX 2 2 GLY A 153 TYR A 157 5 5 HELIX 3 3 SER A 227 ALA A 235 1 9 HELIX 4 4 THR A 237 ASN A 242 1 6 HELIX 5 5 ASP A 339 GLN A 341 5 3 HELIX 6 6 LEU A 403 GLY A 408 1 6 HELIX 7 7 GLY A 433 GLN A 437 5 5 HELIX 8 8 VAL A 461 SER A 472 1 12 HELIX 9 9 PRO A 654 GLY A 660 1 7 HELIX 10 10 ASN B 52 CYS B 56 5 5 HELIX 11 11 GLY B 153 TYR B 157 5 5 HELIX 12 12 SER B 227 ALA B 235 1 9 HELIX 13 13 THR B 237 ASN B 242 1 6 HELIX 14 14 ASP B 339 GLN B 341 5 3 HELIX 15 15 LEU B 403 GLY B 408 1 6 HELIX 16 16 VAL B 461 SER B 472 1 12 HELIX 17 17 PRO B 654 GLY B 660 1 7 SHEET 1 AA 2 THR A 122 ASP A 123 0 SHEET 2 AA 2 SER A 109 SER A 115 1 O TYR A 114 N THR A 122 SHEET 1 AB 2 LYS A 131 ILE A 133 0 SHEET 2 AB 2 SER A 109 SER A 115 -1 O GLN A 110 N THR A 132 SHEET 1 AC 5 TYR A 409 GLN A 410 0 SHEET 2 AC 5 GLY A 76 GLN A 86 1 O GLY A 76 N GLN A 410 SHEET 3 AC 5 ILE A 92 HIS A 99 -1 O HIS A 93 N TYR A 85 SHEET 4 AC 5 SER A 109 SER A 115 -1 O SER A 109 N SER A 98 SHEET 5 AC 5 THR A 122 ASP A 123 1 O THR A 122 N TYR A 114 SHEET 1 AD 5 TYR A 409 GLN A 410 0 SHEET 2 AD 5 GLY A 76 GLN A 86 1 O GLY A 76 N GLN A 410 SHEET 3 AD 5 ILE A 92 HIS A 99 -1 O HIS A 93 N TYR A 85 SHEET 4 AD 5 SER A 109 SER A 115 -1 O SER A 109 N SER A 98 SHEET 5 AD 5 LYS A 131 ILE A 133 -1 N THR A 132 O GLN A 110 SHEET 1 AE 4 GLY A 143 ILE A 150 0 SHEET 2 AE 4 THR A 159 THR A 165 -1 O THR A 159 N ILE A 150 SHEET 3 AE 4 GLU A 181 TYR A 187 -1 O THR A 182 N SER A 164 SHEET 4 AE 4 ILE A 196 LYS A 197 -1 O ILE A 196 N TYR A 187 SHEET 1 AF 4 LEU A 216 PHE A 225 0 SHEET 2 AF 4 PHE A 248 VAL A 255 -1 O PHE A 248 N PHE A 225 SHEET 3 AF 4 ALA A 260 GLN A 267 -1 O ARG A 261 N GLY A 253 SHEET 4 AF 4 TRP A 276 THR A 284 -1 O THR A 277 N ARG A 266 SHEET 1 AG 5 GLY A 314 ALA A 315 0 SHEET 2 AG 5 ASN A 301 ASN A 311 -1 N ASN A 311 O GLY A 314 SHEET 3 AG 5 VAL A 326 GLU A 334 -1 O VAL A 326 N LEU A 310 SHEET 4 AG 5 HIS A 343 VAL A 354 -1 O TRP A 344 N THR A 333 SHEET 5 AG 5 ILE A 360 VAL A 369 -1 O GLU A 361 N GLU A 353 SHEET 1 AH 2 SER A 375 VAL A 383 0 SHEET 2 AH 2 ARG A 387 ILE A 394 -1 O ARG A 387 N VAL A 383 SHEET 1 AI 2 ALA A 412 PHE A 413 0 SHEET 2 AI 2 ARG A 387 ILE A 394 1 O ILE A 394 N ALA A 412 SHEET 1 AJ 5 SER A 441 ASN A 444 0 SHEET 2 AJ 5 VAL A 451 VAL A 460 -1 O THR A 452 N LYS A 443 SHEET 3 AJ 5 ARG A 417 VAL A 427 -1 O ASP A 418 N ARG A 459 SHEET 4 AJ 5 ARG A 387 ILE A 394 -1 O GLN A 388 N LEU A 419 SHEET 5 AJ 5 ALA A 412 PHE A 413 1 O ALA A 412 N ILE A 394 SHEET 1 AK 5 SER A 441 ASN A 444 0 SHEET 2 AK 5 VAL A 451 VAL A 460 -1 O THR A 452 N LYS A 443 SHEET 3 AK 5 ARG A 417 VAL A 427 -1 O ASP A 418 N ARG A 459 SHEET 4 AK 5 ARG A 387 ILE A 394 -1 O GLN A 388 N LEU A 419 SHEET 5 AK 5 SER A 375 VAL A 383 -1 O TYR A 376 N TRP A 393 SHEET 1 AL 2 THR A 473 THR A 476 0 SHEET 2 AL 2 VAL A 623 ASP A 632 -1 O LEU A 630 N SER A 475 SHEET 1 AM 2 VAL A 480 LEU A 482 0 SHEET 2 AM 2 VAL A 623 ASP A 632 -1 O VAL A 623 N LEU A 482 SHEET 1 AN 6 VAL A 594 ARG A 599 0 SHEET 2 AN 6 VAL A 585 ALA A 590 -1 O ILE A 586 N THR A 598 SHEET 3 AN 6 SER A 572 ASP A 582 -1 O THR A 578 N TYR A 589 SHEET 4 AN 6 PHE A 500 GLY A 510 -1 O TYR A 501 N VAL A 581 SHEET 5 AN 6 VAL A 623 ASP A 632 -1 O GLY A 624 N GLU A 508 SHEET 6 AN 6 VAL A 480 LEU A 482 -1 O VAL A 480 N VAL A 625 SHEET 1 AO 6 VAL A 594 ARG A 599 0 SHEET 2 AO 6 VAL A 585 ALA A 590 -1 O ILE A 586 N THR A 598 SHEET 3 AO 6 SER A 572 ASP A 582 -1 O THR A 578 N TYR A 589 SHEET 4 AO 6 PHE A 500 GLY A 510 -1 O TYR A 501 N VAL A 581 SHEET 5 AO 6 VAL A 623 ASP A 632 -1 O GLY A 624 N GLU A 508 SHEET 6 AO 6 THR A 473 THR A 476 -1 O THR A 473 N ASP A 632 SHEET 1 AP 6 TYR A 489 PRO A 491 0 SHEET 2 AP 6 GLY A 609 ASP A 615 -1 O LEU A 612 N THR A 490 SHEET 3 AP 6 LYS A 516 ALA A 523 -1 O LYS A 516 N ASP A 615 SHEET 4 AP 6 THR A 529 ASP A 534 -1 O THR A 529 N VAL A 521 SHEET 5 AP 6 ASN A 539 VAL A 543 -1 O ASN A 539 N ASP A 534 SHEET 6 AP 6 GLU A 558 LYS A 561 -1 O GLU A 558 N VAL A 542 SHEET 1 BA 2 THR B 122 ASP B 123 0 SHEET 2 BA 2 SER B 109 SER B 115 1 O TYR B 114 N THR B 122 SHEET 1 BB 2 LYS B 131 ILE B 133 0 SHEET 2 BB 2 SER B 109 SER B 115 -1 O GLN B 110 N THR B 132 SHEET 1 BC 5 TYR B 409 GLN B 410 0 SHEET 2 BC 5 GLY B 76 GLN B 86 1 O GLY B 76 N GLN B 410 SHEET 3 BC 5 ILE B 92 HIS B 99 -1 O HIS B 93 N TYR B 85 SHEET 4 BC 5 SER B 109 SER B 115 -1 O SER B 109 N SER B 98 SHEET 5 BC 5 THR B 122 ASP B 123 1 O THR B 122 N TYR B 114 SHEET 1 BD 5 TYR B 409 GLN B 410 0 SHEET 2 BD 5 GLY B 76 GLN B 86 1 O GLY B 76 N GLN B 410 SHEET 3 BD 5 ILE B 92 HIS B 99 -1 O HIS B 93 N TYR B 85 SHEET 4 BD 5 SER B 109 SER B 115 -1 O SER B 109 N SER B 98 SHEET 5 BD 5 LYS B 131 ILE B 133 -1 N THR B 132 O GLN B 110 SHEET 1 BE 4 GLY B 143 ILE B 150 0 SHEET 2 BE 4 THR B 159 THR B 165 -1 O THR B 159 N ILE B 150 SHEET 3 BE 4 GLU B 181 TYR B 187 -1 O THR B 182 N SER B 164 SHEET 4 BE 4 ILE B 196 LYS B 197 -1 O ILE B 196 N TYR B 187 SHEET 1 BF 4 LEU B 216 PHE B 225 0 SHEET 2 BF 4 PHE B 248 VAL B 255 -1 O PHE B 248 N PHE B 225 SHEET 3 BF 4 ALA B 260 GLN B 267 -1 O ARG B 261 N GLY B 253 SHEET 4 BF 4 TRP B 276 THR B 284 -1 O THR B 277 N ARG B 266 SHEET 1 BG 5 GLY B 314 ALA B 315 0 SHEET 2 BG 5 ASN B 301 ASN B 311 -1 N ASN B 311 O GLY B 314 SHEET 3 BG 5 VAL B 326 GLU B 334 -1 O VAL B 326 N LEU B 310 SHEET 4 BG 5 HIS B 343 VAL B 354 -1 O TRP B 344 N THR B 333 SHEET 5 BG 5 ILE B 360 VAL B 369 -1 O GLU B 361 N GLU B 353 SHEET 1 BH 2 SER B 375 VAL B 383 0 SHEET 2 BH 2 ARG B 387 ILE B 394 -1 O ARG B 387 N VAL B 383 SHEET 1 BI 2 ALA B 412 PHE B 413 0 SHEET 2 BI 2 ARG B 387 ILE B 394 1 O ILE B 394 N ALA B 412 SHEET 1 BJ 5 SER B 441 ASN B 444 0 SHEET 2 BJ 5 VAL B 451 VAL B 460 -1 O THR B 452 N LYS B 443 SHEET 3 BJ 5 ARG B 417 VAL B 427 -1 O ASP B 418 N ARG B 459 SHEET 4 BJ 5 ARG B 387 ILE B 394 -1 O GLN B 388 N LEU B 419 SHEET 5 BJ 5 ALA B 412 PHE B 413 1 O ALA B 412 N ILE B 394 SHEET 1 BK 5 SER B 441 ASN B 444 0 SHEET 2 BK 5 VAL B 451 VAL B 460 -1 O THR B 452 N LYS B 443 SHEET 3 BK 5 ARG B 417 VAL B 427 -1 O ASP B 418 N ARG B 459 SHEET 4 BK 5 ARG B 387 ILE B 394 -1 O GLN B 388 N LEU B 419 SHEET 5 BK 5 SER B 375 VAL B 383 -1 O TYR B 376 N TRP B 393 SHEET 1 BL 2 THR B 473 THR B 476 0 SHEET 2 BL 2 VAL B 623 ASP B 632 -1 O LEU B 630 N SER B 475 SHEET 1 BM 2 VAL B 480 LEU B 482 0 SHEET 2 BM 2 VAL B 623 ASP B 632 -1 O VAL B 623 N LEU B 482 SHEET 1 BN 6 VAL B 594 ARG B 599 0 SHEET 2 BN 6 VAL B 585 ALA B 590 -1 O ILE B 586 N THR B 598 SHEET 3 BN 6 SER B 572 ASP B 582 -1 O THR B 578 N TYR B 589 SHEET 4 BN 6 PHE B 500 GLY B 510 -1 O TYR B 501 N VAL B 581 SHEET 5 BN 6 VAL B 623 ASP B 632 -1 O GLY B 624 N GLU B 508 SHEET 6 BN 6 VAL B 480 LEU B 482 -1 O VAL B 480 N VAL B 625 SHEET 1 BO 6 VAL B 594 ARG B 599 0 SHEET 2 BO 6 VAL B 585 ALA B 590 -1 O ILE B 586 N THR B 598 SHEET 3 BO 6 SER B 572 ASP B 582 -1 O THR B 578 N TYR B 589 SHEET 4 BO 6 PHE B 500 GLY B 510 -1 O TYR B 501 N VAL B 581 SHEET 5 BO 6 VAL B 623 ASP B 632 -1 O GLY B 624 N GLU B 508 SHEET 6 BO 6 THR B 473 THR B 476 -1 O THR B 473 N ASP B 632 SHEET 1 BP 6 TYR B 489 PRO B 491 0 SHEET 2 BP 6 GLY B 609 ASP B 615 -1 O LEU B 612 N THR B 490 SHEET 3 BP 6 LYS B 516 ALA B 523 -1 O LYS B 516 N ASP B 615 SHEET 4 BP 6 THR B 529 ASP B 534 -1 O THR B 529 N VAL B 521 SHEET 5 BP 6 ASN B 539 VAL B 543 -1 O ASN B 539 N ASP B 534 SHEET 6 BP 6 GLU B 558 LYS B 561 -1 O GLU B 558 N VAL B 542 SSBOND 1 CYS A 42 CYS A 56 1555 1555 2.03 SSBOND 2 CYS B 42 CYS B 56 1555 1555 2.03 LINK ND2 ASN A 52 C1 NAG A1052 1555 1555 1.44 LINK ND2 ASN A 58 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 107 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 125 C1 NAG A1125 1555 1555 1.47 LINK ND2 ASN A 215 C1 NAG A1215 1555 1555 1.45 LINK ND2 ASN A 236 C1 NAG A1236 1555 1555 1.43 LINK ND2 ASN A 242 C1 NAG A1242 1555 1555 1.44 LINK ND2 ASN A 319 C1 NAG A1319 1555 1555 1.45 LINK ND2 ASN A 357 C1 NAG A1357 1555 1555 1.44 LINK ND2 ASN A 444 C1 NAG A1444 1555 1555 1.42 LINK ND2 ASN A 471 C1 NAG A1471 1555 1555 1.44 LINK ND2 ASN A 483 C1 NAG A1483 1555 1555 1.44 LINK ND2 ASN A 512 C1 NAG A1512 1555 1555 1.44 LINK ND2 ASN A 539 C1 NAG A1539 1555 1555 1.46 LINK ND2 ASN A 555 C1 NAG A1555 1555 1555 1.44 LINK ND2 ASN A 576 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 606 C1 NAG A1606 1555 1555 1.45 LINK ND2 ASN A 644 C1 NAG A1644 1555 1555 1.44 LINK ND2 ASN B 52 C1 NAG B1052 1555 1555 1.44 LINK ND2 ASN B 58 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 107 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN B 125 C1 NAG B1125 1555 1555 1.47 LINK ND2 ASN B 215 C1 NAG B1215 1555 1555 1.45 LINK ND2 ASN B 242 C1 NAG B1242 1555 1555 1.45 LINK ND2 ASN B 319 C1 NAG B1319 1555 1555 1.45 LINK ND2 ASN B 357 C1 NAG B1357 1555 1555 1.44 LINK ND2 ASN B 444 C1 NAG B1444 1555 1555 1.45 LINK ND2 ASN B 471 C1 NAG B1471 1555 1555 1.44 LINK ND2 ASN B 483 C1 NAG B1483 1555 1555 1.44 LINK ND2 ASN B 539 C1 NAG B1539 1555 1555 1.45 LINK ND2 ASN B 555 C1 NAG B1555 1555 1555 1.45 LINK ND2 ASN B 576 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN B 644 C1 NAG B1644 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 6 1555 1555 1.45 LINK O3 MAN C 4 C1 MAN C 5 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.42 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.43 LINK O6 BMA D 3 C1 MAN D 7 1555 1555 1.43 LINK O2 MAN D 4 C1 MAN D 5 1555 1555 1.45 LINK O2 MAN D 5 C1 MAN D 6 1555 1555 1.45 LINK O6 MAN D 7 C1 MAN D 8 1555 1555 1.44 LINK O3 MAN D 7 C1 MAN D 10 1555 1555 1.43 LINK O2 MAN D 8 C1 MAN D 9 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O2 FRU F 1 C1 GLC F 2 1555 1555 1.44 LINK O6 GLC F 2 C1 GLA F 3 1555 1555 1.41 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O6 BMA G 3 C1 MAN G 4 1555 1555 1.45 LINK O3 BMA G 3 C1 MAN G 6 1555 1555 1.44 LINK O3 MAN G 4 C1 MAN G 5 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.43 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.44 LINK O6 BMA H 3 C1 MAN H 7 1555 1555 1.42 LINK O2 MAN H 4 C1 MAN H 5 1555 1555 1.44 LINK O2 MAN H 5 C1 MAN H 6 1555 1555 1.45 LINK O6 MAN H 7 C1 MAN H 8 1555 1555 1.43 LINK O3 MAN H 7 C1 MAN H 10 1555 1555 1.43 LINK O2 MAN H 8 C1 MAN H 9 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O2 FRU J 1 C1 GLC J 2 1555 1555 1.43 LINK O6 GLC J 2 C1 GLA J 3 1555 1555 1.42 CISPEP 1 ASN A 205 PRO A 206 0 -12.05 CISPEP 2 ASN B 205 PRO B 206 0 -9.96 CRYST1 74.621 204.767 146.502 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013401 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004884 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006826 0.00000 MTRIX1 1 -1.000000 0.000000 0.000000 74.62000 1 MTRIX2 1 0.000000 -1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1