data_5FM2 # _entry.id 5FM2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.307 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5FM2 PDBE EBI-65399 WWPDB D_1290065399 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 5FM3 _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE JM-KD' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5FM2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-10-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Plaza-Menacho, I.' 1 'Barnouin, K.' 2 'Barry, R.' 3 'Borg, A.' 4 'Orme, M.' 5 'Mouilleron, S.' 6 'Martinez-Torres, R.J.' 7 'Meier, P.' 8 'McDonald, N.Q.' 9 # _citation.id primary _citation.title 'RET Functions as a Dual-Specificity Kinase that Requires Allosteric Inputs from Juxtamembrane Elements.' _citation.journal_abbrev 'Cell Rep' _citation.journal_volume 17 _citation.page_first 3319 _citation.page_last 3332 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 28009299 _citation.pdbx_database_id_DOI 10.1016/j.celrep.2016.11.061 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Plaza-Menacho, I.' 1 ? primary 'Barnouin, K.' 2 ? primary 'Barry, R.' 3 ? primary 'Borg, A.' 4 ? primary 'Orme, M.' 5 ? primary 'Chauhan, R.' 6 ? primary 'Mouilleron, S.' 7 ? primary 'Martinez-Torres, R.J.' 8 ? primary 'Meier, P.' 9 ? primary 'McDonald, N.Q.' 10 ? # _cell.entry_id 5FM2 _cell.length_a 98.430 _cell.length_b 98.430 _cell.length_c 144.550 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FM2 _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET' 40721.398 1 2.7.10.1 ? 'UNP RESIDUES 659-1013' ? 2 non-polymer syn '1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE' 281.356 1 ? ? ? ? 3 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CADHERIN FAMILY MEMBER 12, PROTO-ONCOGENE C-RET' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;CYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKV VKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK(PTR)GSLRG FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG LSRDVYEEDS(PTR)VKR(SEP)QGRIPVKWMAIESLFDHI(PTR)TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_seq_one_letter_code_can ;CYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKV VKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRE SRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE EMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 TYR n 1 3 HIS n 1 4 LYS n 1 5 PHE n 1 6 ALA n 1 7 HIS n 1 8 LYS n 1 9 PRO n 1 10 PRO n 1 11 ILE n 1 12 SER n 1 13 SER n 1 14 ALA n 1 15 GLU n 1 16 MET n 1 17 THR n 1 18 PHE n 1 19 ARG n 1 20 ARG n 1 21 PRO n 1 22 ALA n 1 23 GLN n 1 24 ALA n 1 25 PHE n 1 26 PRO n 1 27 VAL n 1 28 SER n 1 29 TYR n 1 30 SER n 1 31 SER n 1 32 SER n 1 33 GLY n 1 34 ALA n 1 35 ARG n 1 36 ARG n 1 37 PRO n 1 38 SER n 1 39 LEU n 1 40 ASP n 1 41 SER n 1 42 MET n 1 43 GLU n 1 44 ASN n 1 45 GLN n 1 46 VAL n 1 47 SER n 1 48 VAL n 1 49 ASP n 1 50 ALA n 1 51 PHE n 1 52 LYS n 1 53 ILE n 1 54 LEU n 1 55 GLU n 1 56 ASP n 1 57 PRO n 1 58 LYS n 1 59 TRP n 1 60 GLU n 1 61 PHE n 1 62 PRO n 1 63 ARG n 1 64 LYS n 1 65 ASN n 1 66 LEU n 1 67 VAL n 1 68 LEU n 1 69 GLY n 1 70 LYS n 1 71 THR n 1 72 LEU n 1 73 GLY n 1 74 GLU n 1 75 GLY n 1 76 GLU n 1 77 PHE n 1 78 GLY n 1 79 LYS n 1 80 VAL n 1 81 VAL n 1 82 LYS n 1 83 ALA n 1 84 THR n 1 85 ALA n 1 86 PHE n 1 87 HIS n 1 88 LEU n 1 89 LYS n 1 90 GLY n 1 91 ARG n 1 92 ALA n 1 93 GLY n 1 94 TYR n 1 95 THR n 1 96 THR n 1 97 VAL n 1 98 ALA n 1 99 VAL n 1 100 LYS n 1 101 MET n 1 102 LEU n 1 103 LYS n 1 104 GLU n 1 105 ASN n 1 106 ALA n 1 107 SER n 1 108 PRO n 1 109 SER n 1 110 GLU n 1 111 LEU n 1 112 ARG n 1 113 ASP n 1 114 LEU n 1 115 LEU n 1 116 SER n 1 117 GLU n 1 118 PHE n 1 119 ASN n 1 120 VAL n 1 121 LEU n 1 122 LYS n 1 123 GLN n 1 124 VAL n 1 125 ASN n 1 126 HIS n 1 127 PRO n 1 128 HIS n 1 129 VAL n 1 130 ILE n 1 131 LYS n 1 132 LEU n 1 133 TYR n 1 134 GLY n 1 135 ALA n 1 136 CYS n 1 137 SER n 1 138 GLN n 1 139 ASP n 1 140 GLY n 1 141 PRO n 1 142 LEU n 1 143 LEU n 1 144 LEU n 1 145 ILE n 1 146 VAL n 1 147 GLU n 1 148 TYR n 1 149 ALA n 1 150 LYS n 1 151 PTR n 1 152 GLY n 1 153 SER n 1 154 LEU n 1 155 ARG n 1 156 GLY n 1 157 PHE n 1 158 LEU n 1 159 ARG n 1 160 GLU n 1 161 SER n 1 162 ARG n 1 163 LYS n 1 164 VAL n 1 165 GLY n 1 166 PRO n 1 167 GLY n 1 168 TYR n 1 169 LEU n 1 170 GLY n 1 171 SER n 1 172 GLY n 1 173 GLY n 1 174 SER n 1 175 ARG n 1 176 ASN n 1 177 SER n 1 178 SER n 1 179 SER n 1 180 LEU n 1 181 ASP n 1 182 HIS n 1 183 PRO n 1 184 ASP n 1 185 GLU n 1 186 ARG n 1 187 ALA n 1 188 LEU n 1 189 THR n 1 190 MET n 1 191 GLY n 1 192 ASP n 1 193 LEU n 1 194 ILE n 1 195 SER n 1 196 PHE n 1 197 ALA n 1 198 TRP n 1 199 GLN n 1 200 ILE n 1 201 SER n 1 202 GLN n 1 203 GLY n 1 204 MET n 1 205 GLN n 1 206 TYR n 1 207 LEU n 1 208 ALA n 1 209 GLU n 1 210 MET n 1 211 LYS n 1 212 LEU n 1 213 VAL n 1 214 HIS n 1 215 ARG n 1 216 ASP n 1 217 LEU n 1 218 ALA n 1 219 ALA n 1 220 ARG n 1 221 ASN n 1 222 ILE n 1 223 LEU n 1 224 VAL n 1 225 ALA n 1 226 GLU n 1 227 GLY n 1 228 ARG n 1 229 LYS n 1 230 MET n 1 231 LYS n 1 232 ILE n 1 233 SER n 1 234 ASP n 1 235 PHE n 1 236 GLY n 1 237 LEU n 1 238 SER n 1 239 ARG n 1 240 ASP n 1 241 VAL n 1 242 TYR n 1 243 GLU n 1 244 GLU n 1 245 ASP n 1 246 SER n 1 247 PTR n 1 248 VAL n 1 249 LYS n 1 250 ARG n 1 251 SEP n 1 252 GLN n 1 253 GLY n 1 254 ARG n 1 255 ILE n 1 256 PRO n 1 257 VAL n 1 258 LYS n 1 259 TRP n 1 260 MET n 1 261 ALA n 1 262 ILE n 1 263 GLU n 1 264 SER n 1 265 LEU n 1 266 PHE n 1 267 ASP n 1 268 HIS n 1 269 ILE n 1 270 PTR n 1 271 THR n 1 272 THR n 1 273 GLN n 1 274 SER n 1 275 ASP n 1 276 VAL n 1 277 TRP n 1 278 SER n 1 279 PHE n 1 280 GLY n 1 281 VAL n 1 282 LEU n 1 283 LEU n 1 284 TRP n 1 285 GLU n 1 286 ILE n 1 287 VAL n 1 288 THR n 1 289 LEU n 1 290 GLY n 1 291 GLY n 1 292 ASN n 1 293 PRO n 1 294 TYR n 1 295 PRO n 1 296 GLY n 1 297 ILE n 1 298 PRO n 1 299 PRO n 1 300 GLU n 1 301 ARG n 1 302 LEU n 1 303 PHE n 1 304 ASN n 1 305 LEU n 1 306 LEU n 1 307 LYS n 1 308 THR n 1 309 GLY n 1 310 HIS n 1 311 ARG n 1 312 MET n 1 313 GLU n 1 314 ARG n 1 315 PRO n 1 316 ASP n 1 317 ASN n 1 318 CYS n 1 319 SER n 1 320 GLU n 1 321 GLU n 1 322 MET n 1 323 TYR n 1 324 ARG n 1 325 LEU n 1 326 MET n 1 327 LEU n 1 328 GLN n 1 329 CYS n 1 330 TRP n 1 331 LYS n 1 332 GLN n 1 333 GLU n 1 334 PRO n 1 335 ASP n 1 336 LYS n 1 337 ARG n 1 338 PRO n 1 339 VAL n 1 340 PHE n 1 341 ALA n 1 342 ASP n 1 343 ILE n 1 344 SER n 1 345 LYS n 1 346 ASP n 1 347 LEU n 1 348 GLU n 1 349 LYS n 1 350 MET n 1 351 MET n 1 352 VAL n 1 353 LYS n 1 354 ARG n 1 355 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Sf21 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RET_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P07949 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5FM2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 355 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07949 _struct_ref_seq.db_align_beg 659 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1013 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 659 _struct_ref_seq.pdbx_auth_seq_align_end 1013 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PP1 non-polymer . '1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE' ? 'C16 H19 N5' 281.356 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5FM2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_percent_sol 50.83 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.area_resol_mean ? _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.dtime ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.type 'DECTRIS PILATUS 6M' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5FM2 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 3.30 _reflns.number_obs 6686 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.17 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.90 _reflns.B_iso_Wilson_estimate 92.85 _reflns.pdbx_redundancy 10.9 _reflns.pdbx_CC_half ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5FM2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6686 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 55.127 _refine.ls_d_res_high 3.300 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.2345 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2336 _refine.ls_R_factor_R_free 0.2529 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 315 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 23.67 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2080 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 2104 _refine_hist.d_res_high 3.300 _refine_hist.d_res_low 55.127 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 2151 'X-RAY DIFFRACTION' ? f_angle_d 0.647 ? ? 2937 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.152 ? ? 1247 'X-RAY DIFFRACTION' ? f_chiral_restr 0.039 ? ? 328 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 368 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 3.3000 4.1574 3079 0.2572 100.00 0.2941 . . 158 . . . . 'X-RAY DIFFRACTION' . 4.1574 55.1347 3292 0.2230 100.00 0.2321 . . 157 . . . . # _struct.entry_id 5FM2 _struct.title 'Crystal structure of hyper-phosphorylated RET kinase domain with (proximal) juxtamembrane segment' _struct.pdbx_descriptor 'PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET (E.C.2.7.10.1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5FM2 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 62 ? LYS A 64 ? PRO A 720 LYS A 722 5 ? 3 HELX_P HELX_P2 2 LEU A 88 ? ARG A 91 ? LEU A 746 ARG A 749 5 ? 4 HELX_P HELX_P3 3 SER A 107 ? VAL A 124 ? SER A 765 VAL A 782 1 ? 18 HELX_P HELX_P4 4 SER A 153 ? SER A 161 ? SER A 811 SER A 819 1 ? 9 HELX_P HELX_P5 5 THR A 189 ? MET A 210 ? THR A 847 MET A 868 1 ? 22 HELX_P HELX_P6 6 PRO A 256 ? MET A 260 ? PRO A 914 MET A 918 5 ? 5 HELX_P HELX_P7 7 ALA A 261 ? HIS A 268 ? ALA A 919 HIS A 926 1 ? 8 HELX_P HELX_P8 8 THR A 271 ? THR A 288 ? THR A 929 THR A 946 1 ? 18 HELX_P HELX_P9 9 PRO A 298 ? GLU A 300 ? PRO A 956 GLU A 958 5 ? 3 HELX_P HELX_P10 10 ARG A 301 ? THR A 308 ? ARG A 959 THR A 966 1 ? 8 HELX_P HELX_P11 11 SER A 319 ? TRP A 330 ? SER A 977 TRP A 988 1 ? 12 HELX_P HELX_P12 12 GLU A 333 ? ARG A 337 ? GLU A 991 ARG A 995 5 ? 5 HELX_P HELX_P13 13 VAL A 339 ? LYS A 353 ? VAL A 997 LYS A 1011 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A LYS 150 C ? ? ? 1_555 A PTR 151 N ? ? A LYS 808 A PTR 809 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale both ? A PTR 151 C ? ? ? 1_555 A GLY 152 N ? ? A PTR 809 A GLY 810 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale both ? A SER 246 C ? ? ? 1_555 A PTR 247 N ? ? A SER 904 A PTR 905 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale both ? A PTR 247 C ? ? ? 1_555 A VAL 248 N ? ? A PTR 905 A VAL 906 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale both ? A ARG 250 C ? ? ? 1_555 A SEP 251 N ? ? A ARG 908 A SEP 909 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale both ? A SEP 251 C ? ? ? 1_555 A GLN 252 N ? ? A SEP 909 A GLN 910 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale both ? A ILE 269 C ? ? ? 1_555 A PTR 270 N ? ? A ILE 927 A PTR 928 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale both ? A PTR 270 C ? ? ? 1_555 A THR 271 N ? ? A PTR 928 A THR 929 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 66 ? GLU A 74 ? LEU A 724 GLU A 732 AA 2 LYS A 79 ? PHE A 86 ? LYS A 737 PHE A 744 AA 3 TYR A 94 ? MET A 101 ? TYR A 752 MET A 759 AA 4 LEU A 143 ? VAL A 146 ? LEU A 801 VAL A 804 AA 5 LEU A 132 ? CYS A 136 ? LEU A 790 CYS A 794 AB 1 LEU A 212 ? VAL A 213 ? LEU A 870 VAL A 871 AB 2 ARG A 239 ? ASP A 240 ? ARG A 897 ASP A 898 AC 1 ILE A 222 ? ALA A 225 ? ILE A 880 ALA A 883 AC 2 LYS A 229 ? ILE A 232 ? LYS A 887 ILE A 890 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 72 ? N LEU A 730 O VAL A 80 ? O VAL A 738 AA 2 3 N ALA A 85 ? N ALA A 743 O THR A 95 ? O THR A 753 AA 3 4 N LYS A 100 ? N LYS A 758 O LEU A 144 ? O LEU A 802 AA 4 5 O ILE A 145 ? O ILE A 803 N TYR A 133 ? N TYR A 791 AB 1 2 N VAL A 213 ? N VAL A 871 O ARG A 239 ? O ARG A 897 AC 1 2 N ALA A 225 ? N ALA A 883 O LYS A 229 ? O LYS A 887 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE PTR A 809' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SEP A 909' AC3 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE PTR A 928' AC4 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE PP1 A 2012' AC5 Software ? ? ? ? 8 'Binding site for Ligand PTR A 905 bound to SER A 904' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ALA A 149 ? ALA A 807 . ? 1_555 ? 2 AC1 7 LYS A 150 ? LYS A 808 . ? 1_555 ? 3 AC1 7 GLY A 152 ? GLY A 810 . ? 1_555 ? 4 AC1 7 VAL A 224 ? VAL A 882 . ? 1_555 ? 5 AC1 7 ALA A 225 ? ALA A 883 . ? 1_555 ? 6 AC1 7 GLU A 226 ? GLU A 884 . ? 1_555 ? 7 AC1 7 GLY A 227 ? GLY A 885 . ? 1_555 ? 8 AC2 8 ARG A 215 ? ARG A 873 . ? 1_555 ? 9 AC2 8 GLY A 236 ? GLY A 894 . ? 1_555 ? 10 AC2 8 LEU A 237 ? LEU A 895 . ? 1_555 ? 11 AC2 8 ARG A 239 ? ARG A 897 . ? 1_555 ? 12 AC2 8 LYS A 249 ? LYS A 907 . ? 1_555 ? 13 AC2 8 ARG A 250 ? ARG A 908 . ? 1_555 ? 14 AC2 8 GLN A 252 ? GLN A 910 . ? 1_555 ? 15 AC2 8 PTR A 270 ? PTR A 928 . ? 1_555 ? 16 AC3 10 ARG A 215 ? ARG A 873 . ? 1_555 ? 17 AC3 10 ARG A 239 ? ARG A 897 . ? 1_555 ? 18 AC3 10 SEP A 251 ? SEP A 909 . ? 1_555 ? 19 AC3 10 GLY A 253 ? GLY A 911 . ? 1_555 ? 20 AC3 10 MET A 260 ? MET A 918 . ? 1_555 ? 21 AC3 10 SER A 264 ? SER A 922 . ? 1_555 ? 22 AC3 10 HIS A 268 ? HIS A 926 . ? 1_555 ? 23 AC3 10 ILE A 269 ? ILE A 927 . ? 1_555 ? 24 AC3 10 THR A 271 ? THR A 929 . ? 1_555 ? 25 AC3 10 SER A 274 ? SER A 932 . ? 1_555 ? 26 AC4 11 LEU A 72 ? LEU A 730 . ? 1_555 ? 27 AC4 11 PHE A 77 ? PHE A 735 . ? 1_555 ? 28 AC4 11 VAL A 80 ? VAL A 738 . ? 1_555 ? 29 AC4 11 ALA A 98 ? ALA A 756 . ? 1_555 ? 30 AC4 11 LYS A 100 ? LYS A 758 . ? 1_555 ? 31 AC4 11 GLU A 117 ? GLU A 775 . ? 1_555 ? 32 AC4 11 VAL A 146 ? VAL A 804 . ? 1_555 ? 33 AC4 11 GLU A 147 ? GLU A 805 . ? 1_555 ? 34 AC4 11 ALA A 149 ? ALA A 807 . ? 1_555 ? 35 AC4 11 LEU A 223 ? LEU A 881 . ? 1_555 ? 36 AC4 11 SER A 233 ? SER A 891 . ? 1_555 ? 37 AC5 8 PRO A 62 ? PRO A 720 . ? 2_565 ? 38 AC5 8 ASN A 65 ? ASN A 723 . ? 2_565 ? 39 AC5 8 HIS A 87 ? HIS A 745 . ? 7_565 ? 40 AC5 8 HIS A 87 ? HIS A 745 . ? 2_565 ? 41 AC5 8 ASP A 245 ? ASP A 903 . ? 1_555 ? 42 AC5 8 SER A 246 ? SER A 904 . ? 1_555 ? 43 AC5 8 VAL A 248 ? VAL A 906 . ? 1_555 ? 44 AC5 8 LYS A 249 ? LYS A 907 . ? 1_555 ? # _database_PDB_matrix.entry_id 5FM2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5FM2 _atom_sites.fract_transf_matrix[1][1] 0.010160 _atom_sites.fract_transf_matrix[1][2] 0.005866 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011731 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006918 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 659 ? ? ? A . n A 1 2 TYR 2 660 ? ? ? A . n A 1 3 HIS 3 661 ? ? ? A . n A 1 4 LYS 4 662 ? ? ? A . n A 1 5 PHE 5 663 ? ? ? A . n A 1 6 ALA 6 664 ? ? ? A . n A 1 7 HIS 7 665 ? ? ? A . n A 1 8 LYS 8 666 ? ? ? A . n A 1 9 PRO 9 667 ? ? ? A . n A 1 10 PRO 10 668 ? ? ? A . n A 1 11 ILE 11 669 ? ? ? A . n A 1 12 SER 12 670 ? ? ? A . n A 1 13 SER 13 671 ? ? ? A . n A 1 14 ALA 14 672 ? ? ? A . n A 1 15 GLU 15 673 ? ? ? A . n A 1 16 MET 16 674 ? ? ? A . n A 1 17 THR 17 675 ? ? ? A . n A 1 18 PHE 18 676 ? ? ? A . n A 1 19 ARG 19 677 ? ? ? A . n A 1 20 ARG 20 678 ? ? ? A . n A 1 21 PRO 21 679 ? ? ? A . n A 1 22 ALA 22 680 ? ? ? A . n A 1 23 GLN 23 681 ? ? ? A . n A 1 24 ALA 24 682 ? ? ? A . n A 1 25 PHE 25 683 ? ? ? A . n A 1 26 PRO 26 684 ? ? ? A . n A 1 27 VAL 27 685 ? ? ? A . n A 1 28 SER 28 686 ? ? ? A . n A 1 29 TYR 29 687 ? ? ? A . n A 1 30 SER 30 688 ? ? ? A . n A 1 31 SER 31 689 ? ? ? A . n A 1 32 SER 32 690 ? ? ? A . n A 1 33 GLY 33 691 ? ? ? A . n A 1 34 ALA 34 692 ? ? ? A . n A 1 35 ARG 35 693 ? ? ? A . n A 1 36 ARG 36 694 ? ? ? A . n A 1 37 PRO 37 695 ? ? ? A . n A 1 38 SER 38 696 ? ? ? A . n A 1 39 LEU 39 697 ? ? ? A . n A 1 40 ASP 40 698 ? ? ? A . n A 1 41 SER 41 699 ? ? ? A . n A 1 42 MET 42 700 ? ? ? A . n A 1 43 GLU 43 701 ? ? ? A . n A 1 44 ASN 44 702 ? ? ? A . n A 1 45 GLN 45 703 ? ? ? A . n A 1 46 VAL 46 704 ? ? ? A . n A 1 47 SER 47 705 ? ? ? A . n A 1 48 VAL 48 706 ? ? ? A . n A 1 49 ASP 49 707 ? ? ? A . n A 1 50 ALA 50 708 ? ? ? A . n A 1 51 PHE 51 709 ? ? ? A . n A 1 52 LYS 52 710 710 LYS LYS A . n A 1 53 ILE 53 711 711 ILE ILE A . n A 1 54 LEU 54 712 712 LEU LEU A . n A 1 55 GLU 55 713 713 GLU GLU A . n A 1 56 ASP 56 714 714 ASP ASP A . n A 1 57 PRO 57 715 715 PRO PRO A . n A 1 58 LYS 58 716 716 LYS LYS A . n A 1 59 TRP 59 717 717 TRP TRP A . n A 1 60 GLU 60 718 718 GLU GLU A . n A 1 61 PHE 61 719 719 PHE PHE A . n A 1 62 PRO 62 720 720 PRO PRO A . n A 1 63 ARG 63 721 721 ARG ARG A . n A 1 64 LYS 64 722 722 LYS LYS A . n A 1 65 ASN 65 723 723 ASN ASN A . n A 1 66 LEU 66 724 724 LEU LEU A . n A 1 67 VAL 67 725 725 VAL VAL A . n A 1 68 LEU 68 726 726 LEU LEU A . n A 1 69 GLY 69 727 727 GLY GLY A . n A 1 70 LYS 70 728 728 LYS LYS A . n A 1 71 THR 71 729 729 THR THR A . n A 1 72 LEU 72 730 730 LEU LEU A . n A 1 73 GLY 73 731 731 GLY GLY A . n A 1 74 GLU 74 732 732 GLU GLU A . n A 1 75 GLY 75 733 733 GLY GLY A . n A 1 76 GLU 76 734 734 GLU GLU A . n A 1 77 PHE 77 735 735 PHE PHE A . n A 1 78 GLY 78 736 736 GLY GLY A . n A 1 79 LYS 79 737 737 LYS LYS A . n A 1 80 VAL 80 738 738 VAL VAL A . n A 1 81 VAL 81 739 739 VAL VAL A . n A 1 82 LYS 82 740 740 LYS LYS A . n A 1 83 ALA 83 741 741 ALA ALA A . n A 1 84 THR 84 742 742 THR THR A . n A 1 85 ALA 85 743 743 ALA ALA A . n A 1 86 PHE 86 744 744 PHE PHE A . n A 1 87 HIS 87 745 745 HIS HIS A . n A 1 88 LEU 88 746 746 LEU LEU A . n A 1 89 LYS 89 747 747 LYS LYS A . n A 1 90 GLY 90 748 748 GLY GLY A . n A 1 91 ARG 91 749 749 ARG ARG A . n A 1 92 ALA 92 750 750 ALA ALA A . n A 1 93 GLY 93 751 751 GLY GLY A . n A 1 94 TYR 94 752 752 TYR TYR A . n A 1 95 THR 95 753 753 THR THR A . n A 1 96 THR 96 754 754 THR THR A . n A 1 97 VAL 97 755 755 VAL VAL A . n A 1 98 ALA 98 756 756 ALA ALA A . n A 1 99 VAL 99 757 757 VAL VAL A . n A 1 100 LYS 100 758 758 LYS LYS A . n A 1 101 MET 101 759 759 MET MET A . n A 1 102 LEU 102 760 760 LEU LEU A . n A 1 103 LYS 103 761 761 LYS LYS A . n A 1 104 GLU 104 762 762 GLU GLU A . n A 1 105 ASN 105 763 763 ASN ASN A . n A 1 106 ALA 106 764 764 ALA ALA A . n A 1 107 SER 107 765 765 SER SER A . n A 1 108 PRO 108 766 766 PRO PRO A . n A 1 109 SER 109 767 767 SER SER A . n A 1 110 GLU 110 768 768 GLU GLU A . n A 1 111 LEU 111 769 769 LEU LEU A . n A 1 112 ARG 112 770 770 ARG ARG A . n A 1 113 ASP 113 771 771 ASP ASP A . n A 1 114 LEU 114 772 772 LEU LEU A . n A 1 115 LEU 115 773 773 LEU LEU A . n A 1 116 SER 116 774 774 SER SER A . n A 1 117 GLU 117 775 775 GLU GLU A . n A 1 118 PHE 118 776 776 PHE PHE A . n A 1 119 ASN 119 777 777 ASN ASN A . n A 1 120 VAL 120 778 778 VAL VAL A . n A 1 121 LEU 121 779 779 LEU LEU A . n A 1 122 LYS 122 780 780 LYS LYS A . n A 1 123 GLN 123 781 781 GLN GLN A . n A 1 124 VAL 124 782 782 VAL VAL A . n A 1 125 ASN 125 783 783 ASN ASN A . n A 1 126 HIS 126 784 784 HIS HIS A . n A 1 127 PRO 127 785 785 PRO PRO A . n A 1 128 HIS 128 786 786 HIS HIS A . n A 1 129 VAL 129 787 787 VAL VAL A . n A 1 130 ILE 130 788 788 ILE ILE A . n A 1 131 LYS 131 789 789 LYS LYS A . n A 1 132 LEU 132 790 790 LEU LEU A . n A 1 133 TYR 133 791 791 TYR TYR A . n A 1 134 GLY 134 792 792 GLY GLY A . n A 1 135 ALA 135 793 793 ALA ALA A . n A 1 136 CYS 136 794 794 CYS CYS A . n A 1 137 SER 137 795 795 SER SER A . n A 1 138 GLN 138 796 796 GLN GLN A . n A 1 139 ASP 139 797 797 ASP ASP A . n A 1 140 GLY 140 798 798 GLY GLY A . n A 1 141 PRO 141 799 799 PRO PRO A . n A 1 142 LEU 142 800 800 LEU LEU A . n A 1 143 LEU 143 801 801 LEU LEU A . n A 1 144 LEU 144 802 802 LEU LEU A . n A 1 145 ILE 145 803 803 ILE ILE A . n A 1 146 VAL 146 804 804 VAL VAL A . n A 1 147 GLU 147 805 805 GLU GLU A . n A 1 148 TYR 148 806 806 TYR TYR A . n A 1 149 ALA 149 807 807 ALA ALA A . n A 1 150 LYS 150 808 808 LYS LYS A . n A 1 151 PTR 151 809 809 PTR PTR A . n A 1 152 GLY 152 810 810 GLY GLY A . n A 1 153 SER 153 811 811 SER SER A . n A 1 154 LEU 154 812 812 LEU LEU A . n A 1 155 ARG 155 813 813 ARG ARG A . n A 1 156 GLY 156 814 814 GLY GLY A . n A 1 157 PHE 157 815 815 PHE PHE A . n A 1 158 LEU 158 816 816 LEU LEU A . n A 1 159 ARG 159 817 817 ARG ARG A . n A 1 160 GLU 160 818 818 GLU GLU A . n A 1 161 SER 161 819 819 SER SER A . n A 1 162 ARG 162 820 ? ? ? A . n A 1 163 LYS 163 821 ? ? ? A . n A 1 164 VAL 164 822 ? ? ? A . n A 1 165 GLY 165 823 ? ? ? A . n A 1 166 PRO 166 824 ? ? ? A . n A 1 167 GLY 167 825 ? ? ? A . n A 1 168 TYR 168 826 ? ? ? A . n A 1 169 LEU 169 827 ? ? ? A . n A 1 170 GLY 170 828 ? ? ? A . n A 1 171 SER 171 829 ? ? ? A . n A 1 172 GLY 172 830 ? ? ? A . n A 1 173 GLY 173 831 ? ? ? A . n A 1 174 SER 174 832 ? ? ? A . n A 1 175 ARG 175 833 ? ? ? A . n A 1 176 ASN 176 834 ? ? ? A . n A 1 177 SER 177 835 ? ? ? A . n A 1 178 SER 178 836 ? ? ? A . n A 1 179 SER 179 837 ? ? ? A . n A 1 180 LEU 180 838 ? ? ? A . n A 1 181 ASP 181 839 ? ? ? A . n A 1 182 HIS 182 840 ? ? ? A . n A 1 183 PRO 183 841 ? ? ? A . n A 1 184 ASP 184 842 ? ? ? A . n A 1 185 GLU 185 843 ? ? ? A . n A 1 186 ARG 186 844 ? ? ? A . n A 1 187 ALA 187 845 845 ALA ALA A . n A 1 188 LEU 188 846 846 LEU LEU A . n A 1 189 THR 189 847 847 THR THR A . n A 1 190 MET 190 848 848 MET MET A . n A 1 191 GLY 191 849 849 GLY GLY A . n A 1 192 ASP 192 850 850 ASP ASP A . n A 1 193 LEU 193 851 851 LEU LEU A . n A 1 194 ILE 194 852 852 ILE ILE A . n A 1 195 SER 195 853 853 SER SER A . n A 1 196 PHE 196 854 854 PHE PHE A . n A 1 197 ALA 197 855 855 ALA ALA A . n A 1 198 TRP 198 856 856 TRP TRP A . n A 1 199 GLN 199 857 857 GLN GLN A . n A 1 200 ILE 200 858 858 ILE ILE A . n A 1 201 SER 201 859 859 SER SER A . n A 1 202 GLN 202 860 860 GLN GLN A . n A 1 203 GLY 203 861 861 GLY GLY A . n A 1 204 MET 204 862 862 MET MET A . n A 1 205 GLN 205 863 863 GLN GLN A . n A 1 206 TYR 206 864 864 TYR TYR A . n A 1 207 LEU 207 865 865 LEU LEU A . n A 1 208 ALA 208 866 866 ALA ALA A . n A 1 209 GLU 209 867 867 GLU GLU A . n A 1 210 MET 210 868 868 MET MET A . n A 1 211 LYS 211 869 869 LYS LYS A . n A 1 212 LEU 212 870 870 LEU LEU A . n A 1 213 VAL 213 871 871 VAL VAL A . n A 1 214 HIS 214 872 872 HIS HIS A . n A 1 215 ARG 215 873 873 ARG ARG A . n A 1 216 ASP 216 874 874 ASP ASP A . n A 1 217 LEU 217 875 875 LEU LEU A . n A 1 218 ALA 218 876 876 ALA ALA A . n A 1 219 ALA 219 877 877 ALA ALA A . n A 1 220 ARG 220 878 878 ARG ARG A . n A 1 221 ASN 221 879 879 ASN ASN A . n A 1 222 ILE 222 880 880 ILE ILE A . n A 1 223 LEU 223 881 881 LEU LEU A . n A 1 224 VAL 224 882 882 VAL VAL A . n A 1 225 ALA 225 883 883 ALA ALA A . n A 1 226 GLU 226 884 884 GLU GLU A . n A 1 227 GLY 227 885 885 GLY GLY A . n A 1 228 ARG 228 886 886 ARG ARG A . n A 1 229 LYS 229 887 887 LYS LYS A . n A 1 230 MET 230 888 888 MET MET A . n A 1 231 LYS 231 889 889 LYS LYS A . n A 1 232 ILE 232 890 890 ILE ILE A . n A 1 233 SER 233 891 891 SER SER A . n A 1 234 ASP 234 892 892 ASP ASP A . n A 1 235 PHE 235 893 893 PHE PHE A . n A 1 236 GLY 236 894 894 GLY GLY A . n A 1 237 LEU 237 895 895 LEU LEU A . n A 1 238 SER 238 896 896 SER SER A . n A 1 239 ARG 239 897 897 ARG ARG A . n A 1 240 ASP 240 898 898 ASP ASP A . n A 1 241 VAL 241 899 899 VAL VAL A . n A 1 242 TYR 242 900 900 TYR TYR A . n A 1 243 GLU 243 901 901 GLU GLU A . n A 1 244 GLU 244 902 902 GLU GLU A . n A 1 245 ASP 245 903 903 ASP ASP A . n A 1 246 SER 246 904 904 SER SER A . n A 1 247 PTR 247 905 905 PTR PTR A . n A 1 248 VAL 248 906 906 VAL VAL A . n A 1 249 LYS 249 907 907 LYS LYS A . n A 1 250 ARG 250 908 908 ARG ARG A . n A 1 251 SEP 251 909 909 SEP SEP A . n A 1 252 GLN 252 910 910 GLN GLN A . n A 1 253 GLY 253 911 911 GLY GLY A . n A 1 254 ARG 254 912 912 ARG ARG A . n A 1 255 ILE 255 913 913 ILE ILE A . n A 1 256 PRO 256 914 914 PRO PRO A . n A 1 257 VAL 257 915 915 VAL VAL A . n A 1 258 LYS 258 916 916 LYS LYS A . n A 1 259 TRP 259 917 917 TRP TRP A . n A 1 260 MET 260 918 918 MET MET A . n A 1 261 ALA 261 919 919 ALA ALA A . n A 1 262 ILE 262 920 920 ILE ILE A . n A 1 263 GLU 263 921 921 GLU GLU A . n A 1 264 SER 264 922 922 SER SER A . n A 1 265 LEU 265 923 923 LEU LEU A . n A 1 266 PHE 266 924 924 PHE PHE A . n A 1 267 ASP 267 925 925 ASP ASP A . n A 1 268 HIS 268 926 926 HIS HIS A . n A 1 269 ILE 269 927 927 ILE ILE A . n A 1 270 PTR 270 928 928 PTR PTR A . n A 1 271 THR 271 929 929 THR THR A . n A 1 272 THR 272 930 930 THR THR A . n A 1 273 GLN 273 931 931 GLN GLN A . n A 1 274 SER 274 932 932 SER SER A . n A 1 275 ASP 275 933 933 ASP ASP A . n A 1 276 VAL 276 934 934 VAL VAL A . n A 1 277 TRP 277 935 935 TRP TRP A . n A 1 278 SER 278 936 936 SER SER A . n A 1 279 PHE 279 937 937 PHE PHE A . n A 1 280 GLY 280 938 938 GLY GLY A . n A 1 281 VAL 281 939 939 VAL VAL A . n A 1 282 LEU 282 940 940 LEU LEU A . n A 1 283 LEU 283 941 941 LEU LEU A . n A 1 284 TRP 284 942 942 TRP TRP A . n A 1 285 GLU 285 943 943 GLU GLU A . n A 1 286 ILE 286 944 944 ILE ILE A . n A 1 287 VAL 287 945 945 VAL VAL A . n A 1 288 THR 288 946 946 THR THR A . n A 1 289 LEU 289 947 947 LEU LEU A . n A 1 290 GLY 290 948 948 GLY GLY A . n A 1 291 GLY 291 949 949 GLY GLY A . n A 1 292 ASN 292 950 950 ASN ASN A . n A 1 293 PRO 293 951 951 PRO PRO A . n A 1 294 TYR 294 952 952 TYR TYR A . n A 1 295 PRO 295 953 953 PRO PRO A . n A 1 296 GLY 296 954 954 GLY GLY A . n A 1 297 ILE 297 955 955 ILE ILE A . n A 1 298 PRO 298 956 956 PRO PRO A . n A 1 299 PRO 299 957 957 PRO PRO A . n A 1 300 GLU 300 958 958 GLU GLU A . n A 1 301 ARG 301 959 959 ARG ARG A . n A 1 302 LEU 302 960 960 LEU LEU A . n A 1 303 PHE 303 961 961 PHE PHE A . n A 1 304 ASN 304 962 962 ASN ASN A . n A 1 305 LEU 305 963 963 LEU LEU A . n A 1 306 LEU 306 964 964 LEU LEU A . n A 1 307 LYS 307 965 965 LYS LYS A . n A 1 308 THR 308 966 966 THR THR A . n A 1 309 GLY 309 967 967 GLY GLY A . n A 1 310 HIS 310 968 968 HIS HIS A . n A 1 311 ARG 311 969 969 ARG ARG A . n A 1 312 MET 312 970 970 MET MET A . n A 1 313 GLU 313 971 971 GLU GLU A . n A 1 314 ARG 314 972 972 ARG ARG A . n A 1 315 PRO 315 973 973 PRO PRO A . n A 1 316 ASP 316 974 974 ASP ASP A . n A 1 317 ASN 317 975 975 ASN ASN A . n A 1 318 CYS 318 976 976 CYS CYS A . n A 1 319 SER 319 977 977 SER SER A . n A 1 320 GLU 320 978 978 GLU GLU A . n A 1 321 GLU 321 979 979 GLU GLU A . n A 1 322 MET 322 980 980 MET MET A . n A 1 323 TYR 323 981 981 TYR TYR A . n A 1 324 ARG 324 982 982 ARG ARG A . n A 1 325 LEU 325 983 983 LEU LEU A . n A 1 326 MET 326 984 984 MET MET A . n A 1 327 LEU 327 985 985 LEU LEU A . n A 1 328 GLN 328 986 986 GLN GLN A . n A 1 329 CYS 329 987 987 CYS CYS A . n A 1 330 TRP 330 988 988 TRP TRP A . n A 1 331 LYS 331 989 989 LYS LYS A . n A 1 332 GLN 332 990 990 GLN GLN A . n A 1 333 GLU 333 991 991 GLU GLU A . n A 1 334 PRO 334 992 992 PRO PRO A . n A 1 335 ASP 335 993 993 ASP ASP A . n A 1 336 LYS 336 994 994 LYS LYS A . n A 1 337 ARG 337 995 995 ARG ARG A . n A 1 338 PRO 338 996 996 PRO PRO A . n A 1 339 VAL 339 997 997 VAL VAL A . n A 1 340 PHE 340 998 998 PHE PHE A . n A 1 341 ALA 341 999 999 ALA ALA A . n A 1 342 ASP 342 1000 1000 ASP ASP A . n A 1 343 ILE 343 1001 1001 ILE ILE A . n A 1 344 SER 344 1002 1002 SER SER A . n A 1 345 LYS 345 1003 1003 LYS LYS A . n A 1 346 ASP 346 1004 1004 ASP ASP A . n A 1 347 LEU 347 1005 1005 LEU LEU A . n A 1 348 GLU 348 1006 1006 GLU GLU A . n A 1 349 LYS 349 1007 1007 LYS LYS A . n A 1 350 MET 350 1008 1008 MET MET A . n A 1 351 MET 351 1009 1009 MET MET A . n A 1 352 VAL 352 1010 1010 VAL VAL A . n A 1 353 LYS 353 1011 1011 LYS LYS A . n A 1 354 ARG 354 1012 ? ? ? A . n A 1 355 ARG 355 1013 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PP1 1 2012 2012 PP1 PP1 A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A PTR 151 A PTR 809 ? TYR O-PHOSPHOTYROSINE 2 A PTR 247 A PTR 905 ? TYR O-PHOSPHOTYROSINE 3 A SEP 251 A SEP 909 ? SER PHOSPHOSERINE 4 A PTR 270 A PTR 928 ? TYR O-PHOSPHOTYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3470 ? 1 MORE -17.6 ? 1 'SSA (A^2)' 24170 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_555 -x,-x+y,-z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-12-28 2 'Structure model' 1 1 2017-03-01 3 'Structure model' 1 2 2019-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 2 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -31.1642 13.4489 0.2081 0.5378 0.5325 0.8739 0.0843 -0.0586 0.0821 2.0160 3.7570 5.8614 2.6723 0.6666 -0.2271 0.5473 -0.4206 1.0045 0.0916 -0.1293 0.4488 0.1327 -0.5395 -0.3833 'X-RAY DIFFRACTION' 2 ? refined -26.3619 17.0911 -11.4126 0.4372 0.6049 0.6780 0.0159 -0.1847 -0.0942 2.6255 3.4028 3.9130 0.4894 -2.4321 -1.0059 -0.1351 0.2871 -0.2245 -0.4754 0.0508 -0.0373 0.3957 0.0777 0.0787 'X-RAY DIFFRACTION' 3 ? refined -29.8836 35.3942 -7.7665 0.8332 0.7499 0.7643 0.1697 0.0261 0.0266 3.6989 2.2254 3.5607 -1.3453 -2.8245 2.5793 0.2056 0.3039 0.7106 -0.0022 -0.2460 0.1993 -0.4668 -0.2442 0.1416 'X-RAY DIFFRACTION' 4 ? refined -14.3415 31.5242 -23.0069 0.7243 0.8370 0.4890 -0.0628 -0.1691 0.1049 4.3225 6.0885 2.6235 1.4548 -2.6240 1.3939 -0.1649 0.3025 0.3821 -0.9814 0.0842 -0.0271 -0.8097 0.0378 0.1087 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESSEQ 713:737) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESSEQ 738:890) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESSEQ 891:911) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESSEQ 912:1012) ; # _software.name PHENIX _software.classification refinement _software.version '(PHENIX.REFINE)' _software.citation_id ? _software.pdbx_ordinal 1 _software.date ? _software.type ? _software.location ? _software.language ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 873 ? ? 62.59 -65.75 2 1 ASP A 892 ? ? 58.64 81.32 3 1 GLU A 902 ? ? -106.42 51.41 4 1 ARG A 969 ? ? -120.13 -165.60 5 1 ASN A 975 ? ? -99.66 51.84 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 710 ? CG ? A LYS 52 CG 2 1 Y 1 A LYS 710 ? CD ? A LYS 52 CD 3 1 Y 1 A LYS 710 ? CE ? A LYS 52 CE 4 1 Y 1 A LYS 710 ? NZ ? A LYS 52 NZ 5 1 Y 1 A GLU 713 ? CG ? A GLU 55 CG 6 1 Y 1 A GLU 713 ? CD ? A GLU 55 CD 7 1 Y 1 A GLU 713 ? OE1 ? A GLU 55 OE1 8 1 Y 1 A GLU 713 ? OE2 ? A GLU 55 OE2 9 1 Y 1 A LYS 716 ? CG ? A LYS 58 CG 10 1 Y 1 A LYS 716 ? CD ? A LYS 58 CD 11 1 Y 1 A LYS 716 ? CE ? A LYS 58 CE 12 1 Y 1 A LYS 716 ? NZ ? A LYS 58 NZ 13 1 Y 1 A LYS 722 ? CG ? A LYS 64 CG 14 1 Y 1 A LYS 722 ? CD ? A LYS 64 CD 15 1 Y 1 A LYS 722 ? CE ? A LYS 64 CE 16 1 Y 1 A LYS 722 ? NZ ? A LYS 64 NZ 17 1 Y 1 A LYS 728 ? CG ? A LYS 70 CG 18 1 Y 1 A LYS 728 ? CD ? A LYS 70 CD 19 1 Y 1 A LYS 728 ? CE ? A LYS 70 CE 20 1 Y 1 A LYS 728 ? NZ ? A LYS 70 NZ 21 1 Y 1 A GLU 734 ? CG ? A GLU 76 CG 22 1 Y 1 A GLU 734 ? CD ? A GLU 76 CD 23 1 Y 1 A GLU 734 ? OE1 ? A GLU 76 OE1 24 1 Y 1 A GLU 734 ? OE2 ? A GLU 76 OE2 25 1 Y 1 A PHE 744 ? CG ? A PHE 86 CG 26 1 Y 1 A PHE 744 ? CD1 ? A PHE 86 CD1 27 1 Y 1 A PHE 744 ? CD2 ? A PHE 86 CD2 28 1 Y 1 A PHE 744 ? CE1 ? A PHE 86 CE1 29 1 Y 1 A PHE 744 ? CE2 ? A PHE 86 CE2 30 1 Y 1 A PHE 744 ? CZ ? A PHE 86 CZ 31 1 Y 1 A LYS 747 ? CG ? A LYS 89 CG 32 1 Y 1 A LYS 747 ? CD ? A LYS 89 CD 33 1 Y 1 A LYS 747 ? CE ? A LYS 89 CE 34 1 Y 1 A LYS 747 ? NZ ? A LYS 89 NZ 35 1 Y 1 A ARG 749 ? CG ? A ARG 91 CG 36 1 Y 1 A ARG 749 ? CD ? A ARG 91 CD 37 1 Y 1 A ARG 749 ? NE ? A ARG 91 NE 38 1 Y 1 A ARG 749 ? CZ ? A ARG 91 CZ 39 1 Y 1 A ARG 749 ? NH1 ? A ARG 91 NH1 40 1 Y 1 A ARG 749 ? NH2 ? A ARG 91 NH2 41 1 Y 1 A GLU 762 ? CG ? A GLU 104 CG 42 1 Y 1 A GLU 762 ? CD ? A GLU 104 CD 43 1 Y 1 A GLU 762 ? OE1 ? A GLU 104 OE1 44 1 Y 1 A GLU 762 ? OE2 ? A GLU 104 OE2 45 1 Y 1 A LYS 789 ? CD ? A LYS 131 CD 46 1 Y 1 A LYS 789 ? CE ? A LYS 131 CE 47 1 Y 1 A LYS 789 ? NZ ? A LYS 131 NZ 48 1 Y 1 A GLN 796 ? CG ? A GLN 138 CG 49 1 Y 1 A GLN 796 ? CD ? A GLN 138 CD 50 1 Y 1 A GLN 796 ? OE1 ? A GLN 138 OE1 51 1 Y 1 A GLN 796 ? NE2 ? A GLN 138 NE2 52 1 Y 1 A ASP 797 ? CG ? A ASP 139 CG 53 1 Y 1 A ASP 797 ? OD1 ? A ASP 139 OD1 54 1 Y 1 A ASP 797 ? OD2 ? A ASP 139 OD2 55 1 Y 1 A LYS 808 ? CG ? A LYS 150 CG 56 1 Y 1 A LYS 808 ? CD ? A LYS 150 CD 57 1 Y 1 A LYS 808 ? CE ? A LYS 150 CE 58 1 Y 1 A LYS 808 ? NZ ? A LYS 150 NZ 59 1 Y 1 A GLU 867 ? CG ? A GLU 209 CG 60 1 Y 1 A GLU 867 ? CD ? A GLU 209 CD 61 1 Y 1 A GLU 867 ? OE1 ? A GLU 209 OE1 62 1 Y 1 A GLU 867 ? OE2 ? A GLU 209 OE2 63 1 Y 1 A LYS 869 ? CG ? A LYS 211 CG 64 1 Y 1 A LYS 869 ? CD ? A LYS 211 CD 65 1 Y 1 A LYS 869 ? CE ? A LYS 211 CE 66 1 Y 1 A LYS 869 ? NZ ? A LYS 211 NZ 67 1 Y 1 A ASP 874 ? CG ? A ASP 216 CG 68 1 Y 1 A ASP 874 ? OD1 ? A ASP 216 OD1 69 1 Y 1 A ASP 874 ? OD2 ? A ASP 216 OD2 70 1 Y 1 A LYS 887 ? CG ? A LYS 229 CG 71 1 Y 1 A LYS 887 ? CD ? A LYS 229 CD 72 1 Y 1 A LYS 887 ? CE ? A LYS 229 CE 73 1 Y 1 A LYS 887 ? NZ ? A LYS 229 NZ 74 1 Y 1 A ASP 892 ? CG ? A ASP 234 CG 75 1 Y 1 A ASP 892 ? OD1 ? A ASP 234 OD1 76 1 Y 1 A ASP 892 ? OD2 ? A ASP 234 OD2 77 1 Y 1 A VAL 899 ? CG1 ? A VAL 241 CG1 78 1 Y 1 A VAL 899 ? CG2 ? A VAL 241 CG2 79 1 Y 1 A TYR 900 ? CG ? A TYR 242 CG 80 1 Y 1 A TYR 900 ? CD1 ? A TYR 242 CD1 81 1 Y 1 A TYR 900 ? CD2 ? A TYR 242 CD2 82 1 Y 1 A TYR 900 ? CE1 ? A TYR 242 CE1 83 1 Y 1 A TYR 900 ? CE2 ? A TYR 242 CE2 84 1 Y 1 A TYR 900 ? CZ ? A TYR 242 CZ 85 1 Y 1 A TYR 900 ? OH ? A TYR 242 OH 86 1 Y 1 A GLU 901 ? CG ? A GLU 243 CG 87 1 Y 1 A GLU 901 ? CD ? A GLU 243 CD 88 1 Y 1 A GLU 901 ? OE1 ? A GLU 243 OE1 89 1 Y 1 A GLU 901 ? OE2 ? A GLU 243 OE2 90 1 Y 1 A GLU 902 ? CG ? A GLU 244 CG 91 1 Y 1 A GLU 902 ? CD ? A GLU 244 CD 92 1 Y 1 A GLU 902 ? OE1 ? A GLU 244 OE1 93 1 Y 1 A GLU 902 ? OE2 ? A GLU 244 OE2 94 1 Y 1 A SER 904 ? OG ? A SER 246 OG 95 1 Y 1 A VAL 906 ? CG1 ? A VAL 248 CG1 96 1 Y 1 A VAL 906 ? CG2 ? A VAL 248 CG2 97 1 Y 1 A LYS 907 ? CE ? A LYS 249 CE 98 1 Y 1 A LYS 907 ? NZ ? A LYS 249 NZ 99 1 Y 1 A ARG 908 ? CG ? A ARG 250 CG 100 1 Y 1 A ARG 908 ? CD ? A ARG 250 CD 101 1 Y 1 A ARG 908 ? NE ? A ARG 250 NE 102 1 Y 1 A ARG 908 ? CZ ? A ARG 250 CZ 103 1 Y 1 A ARG 908 ? NH1 ? A ARG 250 NH1 104 1 Y 1 A ARG 908 ? NH2 ? A ARG 250 NH2 105 1 Y 1 A GLN 910 ? CG ? A GLN 252 CG 106 1 Y 1 A GLN 910 ? CD ? A GLN 252 CD 107 1 Y 1 A GLN 910 ? OE1 ? A GLN 252 OE1 108 1 Y 1 A GLN 910 ? NE2 ? A GLN 252 NE2 109 1 Y 1 A ASP 925 ? CG ? A ASP 267 CG 110 1 Y 1 A ASP 925 ? OD1 ? A ASP 267 OD1 111 1 Y 1 A ASP 925 ? OD2 ? A ASP 267 OD2 112 1 Y 1 A ARG 959 ? NE ? A ARG 301 NE 113 1 Y 1 A ARG 959 ? CZ ? A ARG 301 CZ 114 1 Y 1 A ARG 959 ? NH1 ? A ARG 301 NH1 115 1 Y 1 A ARG 959 ? NH2 ? A ARG 301 NH2 116 1 Y 1 A LEU 963 ? CG ? A LEU 305 CG 117 1 Y 1 A LEU 963 ? CD1 ? A LEU 305 CD1 118 1 Y 1 A LEU 963 ? CD2 ? A LEU 305 CD2 119 1 Y 1 A LYS 965 ? CG ? A LYS 307 CG 120 1 Y 1 A LYS 965 ? CD ? A LYS 307 CD 121 1 Y 1 A LYS 965 ? CE ? A LYS 307 CE 122 1 Y 1 A LYS 965 ? NZ ? A LYS 307 NZ 123 1 Y 1 A GLU 971 ? CG ? A GLU 313 CG 124 1 Y 1 A GLU 971 ? CD ? A GLU 313 CD 125 1 Y 1 A GLU 971 ? OE1 ? A GLU 313 OE1 126 1 Y 1 A GLU 971 ? OE2 ? A GLU 313 OE2 127 1 Y 1 A ASN 975 ? CG ? A ASN 317 CG 128 1 Y 1 A ASN 975 ? OD1 ? A ASN 317 OD1 129 1 Y 1 A ASN 975 ? ND2 ? A ASN 317 ND2 130 1 Y 1 A GLU 978 ? CG ? A GLU 320 CG 131 1 Y 1 A GLU 978 ? CD ? A GLU 320 CD 132 1 Y 1 A GLU 978 ? OE1 ? A GLU 320 OE1 133 1 Y 1 A GLU 978 ? OE2 ? A GLU 320 OE2 134 1 Y 1 A GLU 979 ? CG ? A GLU 321 CG 135 1 Y 1 A GLU 979 ? CD ? A GLU 321 CD 136 1 Y 1 A GLU 979 ? OE1 ? A GLU 321 OE1 137 1 Y 1 A GLU 979 ? OE2 ? A GLU 321 OE2 138 1 Y 1 A ARG 982 ? CG ? A ARG 324 CG 139 1 Y 1 A ARG 982 ? CD ? A ARG 324 CD 140 1 Y 1 A ARG 982 ? NE ? A ARG 324 NE 141 1 Y 1 A ARG 982 ? CZ ? A ARG 324 CZ 142 1 Y 1 A ARG 982 ? NH1 ? A ARG 324 NH1 143 1 Y 1 A ARG 982 ? NH2 ? A ARG 324 NH2 144 1 Y 1 A LYS 989 ? CD ? A LYS 331 CD 145 1 Y 1 A LYS 989 ? CE ? A LYS 331 CE 146 1 Y 1 A LYS 989 ? NZ ? A LYS 331 NZ 147 1 Y 1 A GLU 991 ? CG ? A GLU 333 CG 148 1 Y 1 A GLU 991 ? CD ? A GLU 333 CD 149 1 Y 1 A GLU 991 ? OE1 ? A GLU 333 OE1 150 1 Y 1 A GLU 991 ? OE2 ? A GLU 333 OE2 151 1 Y 1 A LYS 994 ? CG ? A LYS 336 CG 152 1 Y 1 A LYS 994 ? CD ? A LYS 336 CD 153 1 Y 1 A LYS 994 ? CE ? A LYS 336 CE 154 1 Y 1 A LYS 994 ? NZ ? A LYS 336 NZ 155 1 Y 1 A LYS 1003 ? CG ? A LYS 345 CG 156 1 Y 1 A LYS 1003 ? CD ? A LYS 345 CD 157 1 Y 1 A LYS 1003 ? CE ? A LYS 345 CE 158 1 Y 1 A LYS 1003 ? NZ ? A LYS 345 NZ 159 1 Y 1 A LYS 1007 ? CG ? A LYS 349 CG 160 1 Y 1 A LYS 1007 ? CD ? A LYS 349 CD 161 1 Y 1 A LYS 1007 ? CE ? A LYS 349 CE 162 1 Y 1 A LYS 1007 ? NZ ? A LYS 349 NZ 163 1 Y 1 A VAL 1010 ? CG1 ? A VAL 352 CG1 164 1 Y 1 A VAL 1010 ? CG2 ? A VAL 352 CG2 165 1 Y 1 A LYS 1011 ? CG ? A LYS 353 CG 166 1 Y 1 A LYS 1011 ? CD ? A LYS 353 CD 167 1 Y 1 A LYS 1011 ? CE ? A LYS 353 CE 168 1 Y 1 A LYS 1011 ? NZ ? A LYS 353 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A CYS 659 ? A CYS 1 2 1 Y 1 A TYR 660 ? A TYR 2 3 1 Y 1 A HIS 661 ? A HIS 3 4 1 Y 1 A LYS 662 ? A LYS 4 5 1 Y 1 A PHE 663 ? A PHE 5 6 1 Y 1 A ALA 664 ? A ALA 6 7 1 Y 1 A HIS 665 ? A HIS 7 8 1 Y 1 A LYS 666 ? A LYS 8 9 1 Y 1 A PRO 667 ? A PRO 9 10 1 Y 1 A PRO 668 ? A PRO 10 11 1 Y 1 A ILE 669 ? A ILE 11 12 1 Y 1 A SER 670 ? A SER 12 13 1 Y 1 A SER 671 ? A SER 13 14 1 Y 1 A ALA 672 ? A ALA 14 15 1 Y 1 A GLU 673 ? A GLU 15 16 1 Y 1 A MET 674 ? A MET 16 17 1 Y 1 A THR 675 ? A THR 17 18 1 Y 1 A PHE 676 ? A PHE 18 19 1 Y 1 A ARG 677 ? A ARG 19 20 1 Y 1 A ARG 678 ? A ARG 20 21 1 Y 1 A PRO 679 ? A PRO 21 22 1 Y 1 A ALA 680 ? A ALA 22 23 1 Y 1 A GLN 681 ? A GLN 23 24 1 Y 1 A ALA 682 ? A ALA 24 25 1 Y 1 A PHE 683 ? A PHE 25 26 1 Y 1 A PRO 684 ? A PRO 26 27 1 Y 1 A VAL 685 ? A VAL 27 28 1 Y 1 A SER 686 ? A SER 28 29 1 Y 1 A TYR 687 ? A TYR 29 30 1 Y 1 A SER 688 ? A SER 30 31 1 Y 1 A SER 689 ? A SER 31 32 1 Y 1 A SER 690 ? A SER 32 33 1 Y 1 A GLY 691 ? A GLY 33 34 1 Y 1 A ALA 692 ? A ALA 34 35 1 Y 1 A ARG 693 ? A ARG 35 36 1 Y 1 A ARG 694 ? A ARG 36 37 1 Y 1 A PRO 695 ? A PRO 37 38 1 Y 1 A SER 696 ? A SER 38 39 1 Y 1 A LEU 697 ? A LEU 39 40 1 Y 1 A ASP 698 ? A ASP 40 41 1 Y 1 A SER 699 ? A SER 41 42 1 Y 1 A MET 700 ? A MET 42 43 1 Y 1 A GLU 701 ? A GLU 43 44 1 Y 1 A ASN 702 ? A ASN 44 45 1 Y 1 A GLN 703 ? A GLN 45 46 1 Y 1 A VAL 704 ? A VAL 46 47 1 Y 1 A SER 705 ? A SER 47 48 1 Y 1 A VAL 706 ? A VAL 48 49 1 Y 1 A ASP 707 ? A ASP 49 50 1 Y 1 A ALA 708 ? A ALA 50 51 1 Y 1 A PHE 709 ? A PHE 51 52 1 Y 1 A ARG 820 ? A ARG 162 53 1 Y 1 A LYS 821 ? A LYS 163 54 1 Y 1 A VAL 822 ? A VAL 164 55 1 Y 1 A GLY 823 ? A GLY 165 56 1 Y 1 A PRO 824 ? A PRO 166 57 1 Y 1 A GLY 825 ? A GLY 167 58 1 Y 1 A TYR 826 ? A TYR 168 59 1 Y 1 A LEU 827 ? A LEU 169 60 1 Y 1 A GLY 828 ? A GLY 170 61 1 Y 1 A SER 829 ? A SER 171 62 1 Y 1 A GLY 830 ? A GLY 172 63 1 Y 1 A GLY 831 ? A GLY 173 64 1 Y 1 A SER 832 ? A SER 174 65 1 Y 1 A ARG 833 ? A ARG 175 66 1 Y 1 A ASN 834 ? A ASN 176 67 1 Y 1 A SER 835 ? A SER 177 68 1 Y 1 A SER 836 ? A SER 178 69 1 Y 1 A SER 837 ? A SER 179 70 1 Y 1 A LEU 838 ? A LEU 180 71 1 Y 1 A ASP 839 ? A ASP 181 72 1 Y 1 A HIS 840 ? A HIS 182 73 1 Y 1 A PRO 841 ? A PRO 183 74 1 Y 1 A ASP 842 ? A ASP 184 75 1 Y 1 A GLU 843 ? A GLU 185 76 1 Y 1 A ARG 844 ? A ARG 186 77 1 Y 1 A ARG 1012 ? A ARG 354 78 1 Y 1 A ARG 1013 ? A ARG 355 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE' PP1 3 water HOH #