data_5FN1 # _entry.id 5FN1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5FN1 PDBE EBI-65487 WWPDB D_1290065487 # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-3236 _pdbx_database_related.content_type 'associated EM volume' _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5FN1 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-11-10 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Agirrezabala, X.' 1 'Mendez-Lopez, E.' 2 'Lasso, G.' 3 'Sanchez-Pina, M.A.' 4 'Aranda, M.A.' 5 'Valle, M.' 6 # _citation.id primary _citation.title ;The near-atomic cryoEM structure of a flexible filamentous plant virus shows homology of its coat protein with nucleoproteins of animal viruses. ; _citation.journal_abbrev Elife _citation.journal_volume 4 _citation.page_first e11795 _citation.page_last e11795 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2050-084X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26673077 _citation.pdbx_database_id_DOI 10.7554/eLife.11795 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Agirrezabala, X.' 1 primary 'Mendez-Lopez, E.' 2 primary 'Lasso, G.' 3 primary 'Sanchez-Pina, M.A.' 4 primary 'Aranda, M.' 5 primary 'Valle, M.' 6 # _cell.entry_id 5FN1 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FN1 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'COAT PROTEIN' 25146.357 1 ? ? ? ? 2 polymer nat "5'-R(*UP*UP*UP*UP*UP)-3'" 1485.872 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'PEPINO MOSAIC VIRUS COAT PROTEIN' 2 'PEPINO MOSAIC VIRUS SSRNA MODEL' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKYVSTVTSVATPAEIEALGKIFTAMGLAANETGPAMW DLARAYADVQSSKSAQLIGATPSNPALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFA AFDFFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHMGGANTMYAIDAPPEL ; ;MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKYVSTVTSVATPAEIEALGKIFTAMGLAANETGPAMW DLARAYADVQSSKSAQLIGATPSNPALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFA AFDFFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHMGGANTMYAIDAPPEL ; A ? 2 polyribonucleotide no no UUUUU UUUUU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 ASP n 1 4 THR n 1 5 THR n 1 6 PRO n 1 7 VAL n 1 8 ALA n 1 9 ALA n 1 10 THR n 1 11 SER n 1 12 SER n 1 13 ALA n 1 14 PRO n 1 15 PRO n 1 16 THR n 1 17 ALA n 1 18 LYS n 1 19 ASP n 1 20 ALA n 1 21 GLY n 1 22 ALA n 1 23 LYS n 1 24 ALA n 1 25 PRO n 1 26 SER n 1 27 ASP n 1 28 PHE n 1 29 SER n 1 30 ASN n 1 31 PRO n 1 32 ASN n 1 33 THR n 1 34 ALA n 1 35 PRO n 1 36 SER n 1 37 LEU n 1 38 SER n 1 39 ASP n 1 40 LEU n 1 41 LYS n 1 42 LYS n 1 43 VAL n 1 44 LYS n 1 45 TYR n 1 46 VAL n 1 47 SER n 1 48 THR n 1 49 VAL n 1 50 THR n 1 51 SER n 1 52 VAL n 1 53 ALA n 1 54 THR n 1 55 PRO n 1 56 ALA n 1 57 GLU n 1 58 ILE n 1 59 GLU n 1 60 ALA n 1 61 LEU n 1 62 GLY n 1 63 LYS n 1 64 ILE n 1 65 PHE n 1 66 THR n 1 67 ALA n 1 68 MET n 1 69 GLY n 1 70 LEU n 1 71 ALA n 1 72 ALA n 1 73 ASN n 1 74 GLU n 1 75 THR n 1 76 GLY n 1 77 PRO n 1 78 ALA n 1 79 MET n 1 80 TRP n 1 81 ASP n 1 82 LEU n 1 83 ALA n 1 84 ARG n 1 85 ALA n 1 86 TYR n 1 87 ALA n 1 88 ASP n 1 89 VAL n 1 90 GLN n 1 91 SER n 1 92 SER n 1 93 LYS n 1 94 SER n 1 95 ALA n 1 96 GLN n 1 97 LEU n 1 98 ILE n 1 99 GLY n 1 100 ALA n 1 101 THR n 1 102 PRO n 1 103 SER n 1 104 ASN n 1 105 PRO n 1 106 ALA n 1 107 LEU n 1 108 SER n 1 109 ARG n 1 110 ARG n 1 111 ALA n 1 112 LEU n 1 113 ALA n 1 114 ALA n 1 115 GLN n 1 116 PHE n 1 117 ASP n 1 118 ARG n 1 119 ILE n 1 120 ASN n 1 121 ILE n 1 122 THR n 1 123 PRO n 1 124 ARG n 1 125 GLN n 1 126 PHE n 1 127 CYS n 1 128 MET n 1 129 TYR n 1 130 PHE n 1 131 ALA n 1 132 LYS n 1 133 VAL n 1 134 VAL n 1 135 TRP n 1 136 ASN n 1 137 ILE n 1 138 LEU n 1 139 LEU n 1 140 ASP n 1 141 SER n 1 142 ASN n 1 143 ILE n 1 144 PRO n 1 145 PRO n 1 146 ALA n 1 147 ASN n 1 148 TRP n 1 149 ALA n 1 150 LYS n 1 151 LEU n 1 152 GLY n 1 153 TYR n 1 154 GLN n 1 155 GLU n 1 156 ASP n 1 157 THR n 1 158 LYS n 1 159 PHE n 1 160 ALA n 1 161 ALA n 1 162 PHE n 1 163 ASP n 1 164 PHE n 1 165 PHE n 1 166 ASP n 1 167 GLY n 1 168 VAL n 1 169 THR n 1 170 ASN n 1 171 PRO n 1 172 ALA n 1 173 SER n 1 174 LEU n 1 175 GLN n 1 176 PRO n 1 177 ALA n 1 178 ASP n 1 179 GLY n 1 180 LEU n 1 181 ILE n 1 182 ARG n 1 183 GLN n 1 184 PRO n 1 185 ASN n 1 186 GLU n 1 187 LYS n 1 188 GLU n 1 189 LEU n 1 190 ALA n 1 191 ALA n 1 192 HIS n 1 193 SER n 1 194 VAL n 1 195 ALA n 1 196 LYS n 1 197 TYR n 1 198 GLY n 1 199 ALA n 1 200 LEU n 1 201 ALA n 1 202 ARG n 1 203 GLN n 1 204 LYS n 1 205 ILE n 1 206 SER n 1 207 THR n 1 208 GLY n 1 209 ASN n 1 210 TYR n 1 211 ILE n 1 212 THR n 1 213 THR n 1 214 LEU n 1 215 GLY n 1 216 GLU n 1 217 VAL n 1 218 THR n 1 219 ARG n 1 220 GLY n 1 221 HIS n 1 222 MET n 1 223 GLY n 1 224 GLY n 1 225 ALA n 1 226 ASN n 1 227 THR n 1 228 MET n 1 229 TYR n 1 230 ALA n 1 231 ILE n 1 232 ASP n 1 233 ALA n 1 234 PRO n 1 235 PRO n 1 236 GLU n 1 237 LEU n 2 1 U n 2 2 U n 2 3 U n 2 4 U n 2 5 U n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'PEPINO MOSAIC VIRUS' 112229 ? ? PEPMV-SP13 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'PEPINO MOSAIC VIRUS' 112229 ? ? PEPMV-SP13 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP Q71FK2_9VIRU 1 ? ? Q71FK2 ? 2 PDB 5FN1 2 ? ? 5FN1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5FN1 A 1 ? 237 ? Q71FK2 1 ? 237 ? 1 237 2 2 5FN1 B 1 ? 5 ? 5FN1 1 ? 5 ? 1 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5FN1 _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 5FN1 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 3.90 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1635 _refine_hist.pdbx_number_atoms_nucleic_acid 100 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1735 _refine_hist.d_res_high 3.90 _refine_hist.d_res_low . # _struct.entry_id 5FN1 _struct.title 'Electron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)' _struct.pdbx_descriptor 'COAT PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5FN1 _struct_keywords.pdbx_keywords VIRUS _struct_keywords.text 'VIRUS, PEPMV, FILAMENTOUS PLANT VIRUS, POTEXVIRUS, HELICAL SYMMETRY' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 24 ? PHE A 28 ? ALA A 24 PHE A 28 5 ? 5 HELX_P HELX_P2 2 THR A 33 ? LYS A 41 ? THR A 33 LYS A 41 1 ? 9 HELX_P HELX_P3 3 THR A 54 ? GLY A 69 ? THR A 54 GLY A 69 1 ? 16 HELX_P HELX_P4 4 THR A 75 ? VAL A 89 ? THR A 75 VAL A 89 1 ? 15 HELX_P HELX_P5 5 SER A 108 ? PHE A 116 ? SER A 108 PHE A 116 1 ? 9 HELX_P HELX_P6 6 ASP A 117 ? ASN A 120 ? ASP A 117 ASN A 120 5 ? 4 HELX_P HELX_P7 7 THR A 122 ? MET A 128 ? THR A 122 MET A 128 1 ? 7 HELX_P HELX_P8 8 PHE A 130 ? ASP A 140 ? PHE A 130 ASP A 140 1 ? 11 HELX_P HELX_P9 9 GLN A 154 ? LYS A 158 ? GLN A 154 LYS A 158 5 ? 5 HELX_P HELX_P10 10 ASN A 185 ? SER A 206 ? ASN A 185 SER A 206 1 ? 22 HELX_P HELX_P11 11 THR A 227 ? ALA A 233 ? THR A 227 ALA A 233 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 5FN1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5FN1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 PRO 6 6 ? ? ? A . n A 1 7 VAL 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ALA 9 9 ? ? ? A . n A 1 10 THR 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 ALA 13 13 ? ? ? A . n A 1 14 PRO 14 14 ? ? ? A . n A 1 15 PRO 15 15 ? ? ? A . n A 1 16 THR 16 16 ? ? ? A . n A 1 17 ALA 17 17 ? ? ? A . n A 1 18 LYS 18 18 ? ? ? A . n A 1 19 ASP 19 19 ? ? ? A . n A 1 20 ALA 20 20 ? ? ? A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 TRP 135 135 135 TRP TRP A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLN 175 175 175 GLN GLN A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 TYR 197 197 197 TYR TYR A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 ASN 209 209 209 ASN ASN A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 MET 222 222 222 MET MET A . n A 1 223 GLY 223 223 223 GLY GLY A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 ASN 226 226 226 ASN ASN A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 MET 228 228 228 MET MET A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 ASP 232 232 232 ASP ASP A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 PRO 234 234 234 PRO PRO A . n A 1 235 PRO 235 235 235 PRO PRO A . n A 1 236 GLU 236 236 236 GLU GLU A . n A 1 237 LEU 237 237 237 LEU LEU A . n B 2 1 U 1 1 1 U U B . n B 2 2 U 2 2 2 U U B . n B 2 3 U 3 3 3 U U B . n B 2 4 U 4 4 4 U U B . n B 2 5 U 5 5 5 U U B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? helical 36 2 'helical asymmetric unit' ? dimeric 2 3 'helical asymmetric unit, std helical frame' ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-18)' A,B 2 10 A,B 3 H A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] H 'transform to helical frame' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'helical symmetry operation' ? ? 0.98510933 -0.17192910 0.00000000 0.00000 0.17192910 0.98510933 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -35.55000 2 'helical symmetry operation' ? ? 0.85536426 0.51802701 0.00000000 0.00000 -0.51802701 0.85536426 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -31.60000 3 'helical symmetry operation' ? ? 0.30403306 0.95266148 0.00000000 0.00000 -0.95266148 0.30403306 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -27.65000 4 'helical symmetry operation' ? ? -0.39714789 0.91775463 0.00000000 0.00000 -0.91775463 -0.39714789 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -23.70000 5 'helical symmetry operation' ? ? -0.90258528 0.43051110 0.00000000 0.00000 -0.43051110 -0.90258528 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -19.75000 6 'helical symmetry operation' ? ? -0.96316257 -0.26891982 0.00000000 0.00000 0.26891982 -0.96316257 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -15.80000 7 'helical symmetry operation' ? ? -0.54902282 -0.83580736 0.00000000 0.00000 0.83580736 -0.54902282 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -11.85000 8 'helical symmetry operation' ? ? 0.13571557 -0.99074784 0.00000000 0.00000 0.99074784 0.13571557 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -7.90000 9 'helical symmetry operation' ? ? 0.75356339 -0.65737525 0.00000000 0.00000 0.65737525 0.75356339 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -3.95000 10 'helical symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 11 'helical symmetry operation' ? ? 0.75356339 0.65737525 0.00000000 0.00000 -0.65737525 0.75356339 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 3.95000 12 'helical symmetry operation' ? ? 0.13571557 0.99074784 0.00000000 0.00000 -0.99074784 0.13571557 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 7.90000 13 'helical symmetry operation' ? ? -0.54902282 0.83580736 0.00000000 0.00000 -0.83580736 -0.54902282 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 11.85000 14 'helical symmetry operation' ? ? -0.96316257 0.26891982 0.00000000 0.00000 -0.26891982 -0.96316257 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 15.80000 15 'helical symmetry operation' ? ? -0.90258528 -0.43051110 0.00000000 0.00000 0.43051110 -0.90258528 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 19.75000 16 'helical symmetry operation' ? ? -0.39714789 -0.91775463 0.00000000 0.00000 0.91775463 -0.39714789 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 23.70000 17 'helical symmetry operation' ? ? 0.30403306 -0.95266148 0.00000000 0.00000 0.95266148 0.30403306 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 27.65000 18 'helical symmetry operation' ? ? 0.85536426 -0.51802701 0.00000000 0.00000 0.51802701 0.85536426 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 31.60000 # _pdbx_helical_symmetry.entry_id 5FN1 _pdbx_helical_symmetry.number_of_operations 18 _pdbx_helical_symmetry.rotation_per_n_subunits -41.100000 _pdbx_helical_symmetry.rise_per_n_subunits 3.950000 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-30 2 'Structure model' 1 1 2016-12-21 3 'Structure model' 1 2 2017-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category em_software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_em_software.image_processing_id' # _em_3d_reconstruction.entry_id 5FN1 _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 1.36 _em_3d_reconstruction.resolution 3.9 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details 'SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-3236. (DEPOSITION ID: 14021).' _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '100 MM TRIS-CITRIC ACID' _em_buffer.pH 8 _em_buffer.details '100 MM TRIS-CITRIC ACID' # _em_entity_assembly.id 1 _em_entity_assembly.name 'Pepino Mosaic Virus, PepMV' _em_entity_assembly.type VIRUS _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 5FN1 _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 100 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 5FN1 _em_imaging.id 1 _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_id 1 _em_imaging.date 2014-02-20 _em_imaging.temperature ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 3500 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.7 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 59000 _em_imaging.calibrated_magnification 102987 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details ? _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'HOLEY CARBON' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? # _em_vitrification.entry_id 5FN1 _em_vitrification.id 1 _em_vitrification.instrument 'FEI VITROBOT MARK II' _em_vitrification.cryogen_name ETHANE _em_vitrification.specimen_id 1 _em_vitrification.details 'VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT MARK II,' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 5FN1 _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 24 ? ? 70.63 72.77 2 1 SER A 29 ? ? -177.38 -51.50 3 1 LYS A 44 ? ? 51.61 -85.99 4 1 TYR A 45 ? ? -134.09 -89.25 5 1 VAL A 46 ? ? -138.27 -79.30 6 1 SER A 47 ? ? -161.41 56.66 7 1 THR A 75 ? ? -134.48 -56.28 8 1 ASP A 88 ? ? -71.39 -77.92 9 1 GLN A 96 ? ? 64.60 84.36 10 1 ILE A 98 ? ? 39.68 84.80 11 1 ALA A 106 ? ? 80.53 -43.86 12 1 GLN A 175 ? ? 43.87 77.38 13 1 THR A 207 ? ? 69.60 63.99 14 1 THR A 213 ? ? 61.24 -128.12 15 1 LEU A 214 ? ? 74.21 -59.78 16 1 HIS A 221 ? ? 57.32 -72.85 17 1 MET A 222 ? ? 62.31 -77.20 18 1 ALA A 225 ? ? -94.94 55.22 19 1 ASN A 226 ? ? 63.43 166.04 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A PRO 6 ? A PRO 6 7 1 Y 1 A VAL 7 ? A VAL 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ALA 9 ? A ALA 9 10 1 Y 1 A THR 10 ? A THR 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A ALA 13 ? A ALA 13 14 1 Y 1 A PRO 14 ? A PRO 14 15 1 Y 1 A PRO 15 ? A PRO 15 16 1 Y 1 A THR 16 ? A THR 16 17 1 Y 1 A ALA 17 ? A ALA 17 18 1 Y 1 A LYS 18 ? A LYS 18 19 1 Y 1 A ASP 19 ? A ASP 19 20 1 Y 1 A ALA 20 ? A ALA 20 # _em_ctf_correction.id 1 _em_ctf_correction.details 'EACH PARTICLE PHASE FLIPPING' _em_ctf_correction.type ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 25 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'FEI FALCON II (4k x 4k)' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id _em_software.imaging_id _em_software.fitting_id 1 CTFTILT ? 'CTF CORRECTION' ? 1 ? ? 2 EMAN 2 RECONSTRUCTION ? 1 ? ? 3 SPRING ? RECONSTRUCTION ? 1 ? ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? #