HEADER HYDROLASE 11-NOV-15 5FN8
TITLE CRYSTAL STRUCTURE OF RAT CD45 EXTRACELLULAR REGION, DOMAINS D3-D4
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: EXTRACELLULAR REGION DOMAINS D3-D4, RESIDUES 357-546;
COMPND 5 SYNONYM: LEUKOCYTE COMMON ANTIGEN, L-CA, T200, CD45;
COMPND 6 EC: 3.1.3.48;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;
SOURCE 3 ORGANISM_COMMON: NORWAY RAT;
SOURCE 4 ORGANISM_TAXID: 10116;
SOURCE 5 ORGAN: THYMUS;
SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029;
SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: CHO-K1;
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PEE14
KEYWDS HYDROLASE, RECEPTOR PROTEIN TYROSINE PHOSPHATASE C, CD45, PTPRC
EXPDTA X-RAY DIFFRACTION
AUTHOR V.T.CHANG,R.A.FERNANDES,K.A.GANZINGER,S.F.LEE,C.SIEBOLD,J.MCCOLL,
AUTHOR 2 P.JONSSON,M.PALAYRET,K.HARLOS,C.H.COLES,E.Y.JONES,Y.LUI,E.HUANG,
AUTHOR 3 R.J.C.GILBERT,D.KLENERMAN,A.R.ARICESCU,S.J.DAVIS
REVDAT 6 20-NOV-24 5FN8 1 HETSYN
REVDAT 5 29-JUL-20 5FN8 1 COMPND REMARK HETNAM LINK
REVDAT 5 2 1 SITE
REVDAT 4 04-MAY-16 5FN8 1 JRNL
REVDAT 3 27-APR-16 5FN8 1 JRNL REMARK MASTER
REVDAT 2 30-MAR-16 5FN8 1 JRNL
REVDAT 1 23-MAR-16 5FN8 0
JRNL AUTH V.T.CHANG,R.A.FERNANDES,K.A.GANZINGER,S.F.LEE,C.SIEBOLD,
JRNL AUTH 2 J.MCCOLL,P.JONSSON,M.PALAYRET,K.HARLOS,C.H.COLES,E.Y.JONES,
JRNL AUTH 3 Y.LUI,E.HUANG,R.J.GILBERT,D.KLENERMAN,A.R.ARICESCU,S.J.DAVIS
JRNL TITL INITIATION OF T CELL SIGNALING BY CD45 SEGREGATION AT 'CLOSE
JRNL TITL 2 CONTACTS'.
JRNL REF NAT.IMMUNOL. V. 17 574 2016
JRNL REFN ISSN 1529-2908
JRNL PMID 26998761
JRNL DOI 10.1038/NI.3392
REMARK 2
REMARK 2 RESOLUTION. 2.45 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.65
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 3 NUMBER OF REFLECTIONS : 29106
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.216
REMARK 3 R VALUE (WORKING SET) : 0.214
REMARK 3 FREE R VALUE : 0.236
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010
REMARK 3 FREE R VALUE TEST SET COUNT : 1459
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 15
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.54
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2804
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2698
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2670
REMARK 3 BIN R VALUE (WORKING SET) : 0.2715
REMARK 3 BIN FREE R VALUE : 0.2360
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.78
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 134
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2822
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 97
REMARK 3 SOLVENT ATOMS : 56
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 79.47
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.80
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -10.03400
REMARK 3 B22 (A**2) : 2.53540
REMARK 3 B33 (A**2) : 7.49860
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.505
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.215
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.181
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.218
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.184
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 2996 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 4077 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1029 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 74 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 433 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 2996 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 408 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 3151 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.22
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.38
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.61
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|3 - A|187 }
REMARK 3 ORIGIN FOR THE GROUP (A): 36.8712 5.7589 43.1587
REMARK 3 T TENSOR
REMARK 3 T11: -0.0757 T22: -0.1675
REMARK 3 T33: -0.1343 T12: 0.1568
REMARK 3 T13: 0.0043 T23: -0.0178
REMARK 3 L TENSOR
REMARK 3 L11: 1.8930 L22: 0.6922
REMARK 3 L33: 2.6654 L12: -0.0882
REMARK 3 L13: -1.1280 L23: -0.2703
REMARK 3 S TENSOR
REMARK 3 S11: -0.1040 S12: 0.0308 S13: 0.1224
REMARK 3 S21: -0.0539 S22: -0.2509 S23: 0.0883
REMARK 3 S31: -0.0813 S32: 0.0761 S33: 0.3549
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|3 - B|187 }
REMARK 3 ORIGIN FOR THE GROUP (A): 5.4699 23.9898 64.2706
REMARK 3 T TENSOR
REMARK 3 T11: -0.0344 T22: -0.2043
REMARK 3 T33: -0.1862 T12: -0.0141
REMARK 3 T13: 0.2347 T23: -0.0216
REMARK 3 L TENSOR
REMARK 3 L11: 2.4397 L22: 2.6699
REMARK 3 L33: 0.7153 L12: -1.2827
REMARK 3 L13: -0.4962 L23: 0.0237
REMARK 3 S TENSOR
REMARK 3 S11: -0.0730 S12: 0.1663 S13: 0.0033
REMARK 3 S21: -0.0094 S22: 0.3365 S23: 0.0869
REMARK 3 S31: -0.1208 S32: 0.0913 S33: -0.2636
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP.
REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY THE CORRECT
REMARK 3 OLIGOMERIC STATE OF THIS CONSTRUCT IS MONOMERIC, HOWEVER IT
REMARK 3 CRYSTALLIZED AS A DIMER DUE TO D3 DOMAIN SWAPPING
REMARK 4
REMARK 4 5FN8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-NOV-15.
REMARK 100 THE DEPOSITION ID IS D_1290065499.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 05-AUG-09
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 4.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I03
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0714
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2
REMARK 200 DATA SCALING SOFTWARE : XIA2
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29113
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450
REMARK 200 RESOLUTION RANGE LOW (A) : 96.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 4.800
REMARK 200 R MERGE (I) : 0.05000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.9000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5
REMARK 200 DATA REDUNDANCY IN SHELL : 4.10
REMARK 200 R MERGE FOR SHELL (I) : 0.96000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD
REMARK 200 SOFTWARE USED: SHELXD, AUTOSHARP
REMARK 200 STARTING MODEL: NONE
REMARK 200
REMARK 200 REMARK: NONE
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 75.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.89
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 10% V/V 2-PROPANOL, 0.2M LISO4, 0.1M
REMARK 280 SODIUM PHOSPHATE-CITRATE, PH=4.2, PH 4.2
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z
REMARK 290 3555 -X,Y,-Z
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z+1/2
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.20500
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.58000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.65500
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.20500
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.58000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.65500
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.20500
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.58000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.65500
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.20500
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.58000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.65500
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2, 3, 4
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 10250 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 21470 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.2 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 141.31000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 10780 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 21450 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.9 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 84.41000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 3
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 4
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 80
REMARK 465 ARG A 81
REMARK 465 VAL A 82
REMARK 465 GLN A 83
REMARK 465 ARG A 84
REMARK 465 ASN A 85
REMARK 465 GLY A 86
REMARK 465 SER A 188
REMARK 465 TYR A 189
REMARK 465 ASN A 190
REMARK 465 SER A 191
REMARK 465 LYS A 192
REMARK 465 GLY B 80
REMARK 465 ARG B 81
REMARK 465 VAL B 82
REMARK 465 GLN B 83
REMARK 465 ARG B 84
REMARK 465 ASN B 85
REMARK 465 GLY B 86
REMARK 465 SER B 188
REMARK 465 TYR B 189
REMARK 465 ASN B 190
REMARK 465 SER B 191
REMARK 465 LYS B 192
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OE2 GLU A 136 OE2 GLU B 136 1.88
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PRO A 7 104.35 -51.03
REMARK 500 CYS A 15 9.90 -153.30
REMARK 500 SER A 32 -80.33 -32.48
REMARK 500 LYS A 33 -157.46 -132.16
REMARK 500 SER A 112 -168.01 -162.10
REMARK 500 PRO B 7 104.04 -53.04
REMARK 500 CYS B 15 10.15 -153.48
REMARK 500 SER B 32 -79.47 -33.63
REMARK 500 LYS B 33 -158.52 -133.71
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5FMV RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN CD45 EXTRACELLULAR REGION, DOMAINS D1-D4
REMARK 900 RELATED ID: 5FN6 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN CD45 EXTRACELLULAR REGION, DOMAINS D1-D3
REMARK 900 RELATED ID: 5FN7 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN CD45 EXTRACELLULAR REGION, DOMAINS D1-D2
DBREF 5FN8 A 3 192 UNP P04157 PTPRC_RAT 357 546
DBREF 5FN8 B 3 192 UNP P04157 PTPRC_RAT 357 546
SEQRES 1 A 190 ASP PHE GLY THR PRO GLU MET LEU PRO HIS VAL GLN CYS
SEQRES 2 A 190 LYS ASN SER THR ASN SER THR THR LEU VAL SER TRP ALA
SEQRES 3 A 190 GLU PRO ALA SER LYS HIS HIS GLY TYR ILE LEU CYS TYR
SEQRES 4 A 190 LYS LYS THR PRO SER GLU LYS CYS GLU ASN LEU ALA ASN
SEQRES 5 A 190 ASP VAL ASN SER PHE GLU VAL LYS ASN LEU ARG PRO TYR
SEQRES 6 A 190 THR GLU TYR THR VAL SER LEU PHE ALA TYR VAL ILE GLY
SEQRES 7 A 190 ARG VAL GLN ARG ASN GLY PRO ALA LYS ASP CYS ASN PHE
SEQRES 8 A 190 ARG THR LYS ALA ALA ARG PRO GLY LYS VAL ASN GLY MET
SEQRES 9 A 190 LYS THR SER ARG ALA SER ASP ASN SER ILE ASN VAL THR
SEQRES 10 A 190 CYS ASN SER PRO TYR GLU ILE ASN GLY PRO GLU ALA ARG
SEQRES 11 A 190 TYR ILE LEU GLU VAL LYS SER GLY GLY SER LEU VAL LYS
SEQRES 12 A 190 THR PHE ASN GLN SER THR CYS LYS PHE VAL VAL ASP ASN
SEQRES 13 A 190 LEU TYR TYR SER THR ASP TYR GLU PHE LEU VAL TYR PHE
SEQRES 14 A 190 TYR ASN GLY GLU TYR LEU GLY ASP PRO GLU ILE LYS PRO
SEQRES 15 A 190 GLN SER THR SER TYR ASN SER LYS
SEQRES 1 B 190 ASP PHE GLY THR PRO GLU MET LEU PRO HIS VAL GLN CYS
SEQRES 2 B 190 LYS ASN SER THR ASN SER THR THR LEU VAL SER TRP ALA
SEQRES 3 B 190 GLU PRO ALA SER LYS HIS HIS GLY TYR ILE LEU CYS TYR
SEQRES 4 B 190 LYS LYS THR PRO SER GLU LYS CYS GLU ASN LEU ALA ASN
SEQRES 5 B 190 ASP VAL ASN SER PHE GLU VAL LYS ASN LEU ARG PRO TYR
SEQRES 6 B 190 THR GLU TYR THR VAL SER LEU PHE ALA TYR VAL ILE GLY
SEQRES 7 B 190 ARG VAL GLN ARG ASN GLY PRO ALA LYS ASP CYS ASN PHE
SEQRES 8 B 190 ARG THR LYS ALA ALA ARG PRO GLY LYS VAL ASN GLY MET
SEQRES 9 B 190 LYS THR SER ARG ALA SER ASP ASN SER ILE ASN VAL THR
SEQRES 10 B 190 CYS ASN SER PRO TYR GLU ILE ASN GLY PRO GLU ALA ARG
SEQRES 11 B 190 TYR ILE LEU GLU VAL LYS SER GLY GLY SER LEU VAL LYS
SEQRES 12 B 190 THR PHE ASN GLN SER THR CYS LYS PHE VAL VAL ASP ASN
SEQRES 13 B 190 LEU TYR TYR SER THR ASP TYR GLU PHE LEU VAL TYR PHE
SEQRES 14 B 190 TYR ASN GLY GLU TYR LEU GLY ASP PRO GLU ILE LYS PRO
SEQRES 15 B 190 GLN SER THR SER TYR ASN SER LYS
MODRES 5FN8 ASN A 20 ASN GLYCOSYLATION SITE
MODRES 5FN8 ASN A 117 ASN GLYCOSYLATION SITE
MODRES 5FN8 ASN A 148 ASN GLYCOSYLATION SITE
MODRES 5FN8 ASN B 20 ASN GLYCOSYLATION SITE
MODRES 5FN8 ASN B 117 ASN GLYCOSYLATION SITE
MODRES 5FN8 ASN B 148 ASN GLYCOSYLATION SITE
HET NAG A1188 14
HET NAG A1189 14
HET NAG A1190 14
HET FLC A1191 13
HET NAG B1188 14
HET NAG B1189 14
HET NAG B1190 14
HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
HETNAM FLC CITRATE ANION
HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-
HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-
HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE
FORMUL 3 NAG 6(C8 H15 N O6)
FORMUL 6 FLC C6 H5 O7 3-
FORMUL 10 HOH *56(H2 O)
SHEET 1 AA 2 GLU A 69 VAL A 72 0
SHEET 2 AA 2 CYS A 91 ARG A 94 -1 O CYS A 91 N VAL A 72
SHEET 1 AB 3 ASN A 104 ARG A 110 0
SHEET 2 AB 3 ILE A 116 ASN A 121 -1 O ASN A 117 N SER A 109
SHEET 3 AB 3 LYS A 153 VAL A 156 -1 O PHE A 154 N VAL A 118
SHEET 1 AC 4 SER A 142 GLN A 149 0
SHEET 2 AC 4 ARG A 132 SER A 139 -1 O TYR A 133 N GLN A 149
SHEET 3 AC 4 ASP A 164 TYR A 172 -1 O GLU A 166 N LYS A 138
SHEET 4 AC 4 GLU A 181 SER A 186 -1 O GLU A 181 N VAL A 169
SHEET 1 BA 2 GLU B 69 VAL B 72 0
SHEET 2 BA 2 CYS B 91 ARG B 94 -1 O CYS B 91 N VAL B 72
SHEET 1 BB 3 ASN B 104 ARG B 110 0
SHEET 2 BB 3 ILE B 116 ASN B 121 -1 O ASN B 117 N SER B 109
SHEET 3 BB 3 LYS B 153 VAL B 156 -1 O PHE B 154 N VAL B 118
SHEET 1 BC 4 SER B 142 GLN B 149 0
SHEET 2 BC 4 ARG B 132 SER B 139 -1 O TYR B 133 N GLN B 149
SHEET 3 BC 4 ASP B 164 TYR B 172 -1 O GLU B 166 N LYS B 138
SHEET 4 BC 4 GLU B 181 SER B 186 -1 O GLU B 181 N VAL B 169
SSBOND 1 CYS A 15 CYS A 91 1555 2655 2.76
SSBOND 2 CYS A 40 CYS A 49 1555 2655 2.51
SSBOND 3 CYS A 120 CYS A 152 1555 1555 2.05
SSBOND 4 CYS B 15 CYS B 91 1555 3556 2.76
SSBOND 5 CYS B 40 CYS B 49 1555 3556 2.60
SSBOND 6 CYS B 120 CYS B 152 1555 1555 2.04
LINK ND2 ASN A 20 C1 NAG A1189 1555 1555 1.43
LINK ND2 ASN A 117 C1 NAG A1190 1555 1555 1.43
LINK ND2 ASN A 148 C1 NAG A1188 1555 1555 1.44
LINK ND2 ASN B 20 C1 NAG B1189 1555 1555 1.43
LINK ND2 ASN B 117 C1 NAG B1190 1555 1555 1.43
LINK ND2 ASN B 148 C1 NAG B1188 1555 1555 1.43
CRYST1 84.410 131.160 141.310 90.00 90.00 90.00 I 2 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011847 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007624 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007077 0.00000